View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: Solexa-NF5867-6 (Length: 142)
Name: Solexa-NF5867-6
Description: NF5867
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] Solexa-NF5867-6 |
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| [»] chr4 (1 HSPs) |
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Alignment Details
Target: chr4 (Bit Score: 140; Significance: 1e-73; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 140; E-Value: 1e-73
Query Start/End: Original strand, 3 - 142
Target Start/End: Original strand, 20816984 - 20817123
Alignment:
| Q |
3 |
taggtcacacctacactaaatgtgcatatcattggatattgcaactagacgacaggaaggaaatttaatgctcccacacctaaaaaccccaaacagaagt |
102 |
Q |
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| T |
20816984 |
taggtcacacctacactaaatgtgcatatcattggatattgcaactagacgacaggaaggaaatttaatgctcccacacctaaaaaccccaaacagaagt |
20817083 |
T |
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| Q |
103 |
gaataaatgagtaatagcaagtggtcacacacatccatca |
142 |
Q |
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| T |
20817084 |
gaataaatgagtaatagcaagtggtcacacacatccatca |
20817123 |
T |
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