View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: Solexa-NF5869-7 (Length: 104)
Name: Solexa-NF5869-7
Description: NF5869
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] Solexa-NF5869-7 |
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Alignment Details
Target: chr3 (Bit Score: 59; Significance: 2e-25; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 59; E-Value: 2e-25
Query Start/End: Original strand, 8 - 70
Target Start/End: Complemental strand, 52799236 - 52799174
Alignment:
| Q |
8 |
ctttttgcaaagtggagctgaaagttattagttgagaggggttctttgtggattgctaaacat |
70 |
Q |
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| T |
52799236 |
ctttttgcaaagtggagatgaaagttattagttgagaggggttctttgtggattgctaaacat |
52799174 |
T |
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