View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: Solexa-NF5870-6 (Length: 164)
Name: Solexa-NF5870-6
Description: NF5870
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] Solexa-NF5870-6 |
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Alignment Details
Target: chr7 (Bit Score: 124; Significance: 4e-64; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 124; E-Value: 4e-64
Query Start/End: Original strand, 7 - 145
Target Start/End: Complemental strand, 45820658 - 45820519
Alignment:
| Q |
7 |
agaaacttgtgggcagtctgcaccatccatgttagaggatcttttttctcggtataggtatgtttcttgtttcctagtaat-gtttaatcttggttttta |
105 |
Q |
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| T |
45820658 |
agaaacttgtgggcagtctgcaccatccatgttagaggatctgttttctcggtataggtatgtttcttgtttcctagtaatggtttaatcttggtttttg |
45820559 |
T |
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| Q |
106 |
ggctacaaaggtttatgtaagttagtgcttagagagacaa |
145 |
Q |
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|||||||||||||||||||||||||||||||||||||||| |
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| T |
45820558 |
ggctacaaaggtttatgtaagttagtgcttagagagacaa |
45820519 |
T |
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