View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: Solexa-NF5871-27 (Length: 141)
Name: Solexa-NF5871-27
Description: NF5871
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] Solexa-NF5871-27 |
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| [»] chr4 (1 HSPs) |
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Alignment Details
Target: chr4 (Bit Score: 126; Significance: 2e-65; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 126; E-Value: 2e-65
Query Start/End: Original strand, 4 - 141
Target Start/End: Complemental strand, 49202402 - 49202265
Alignment:
| Q |
4 |
aggggacaacagtgcttataataagaaacttgtctttgcaatgcatatcaggcggtgccgtgcgttgagcttgcatcgtaactagtacatccaaacaata |
103 |
Q |
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| T |
49202402 |
aggggacaacagtgcttataataagaaacttgtctttgcaatgcatatcagggggtgccgtgcgttgagcttgcatcgtaactagtacatccaaaaaata |
49202303 |
T |
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| Q |
104 |
aacataagccagtaacttgtgttacttgaatcatacta |
141 |
Q |
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| T |
49202302 |
aacataagccaataacttgtgttacttgaatcatacta |
49202265 |
T |
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