View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: Solexa-NF5871-38 (Length: 134)
Name: Solexa-NF5871-38
Description: NF5871
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] Solexa-NF5871-38 |
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| [»] chr7 (1 HSPs) |
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Alignment Details
Target: chr7 (Bit Score: 128; Significance: 1e-66; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 128; E-Value: 1e-66
Query Start/End: Original strand, 7 - 134
Target Start/End: Complemental strand, 41760809 - 41760682
Alignment:
| Q |
7 |
atgaagatgattcaaaagccattgtattcttattaatgctgcatatagtacgtagagttatatggtaggagaaatcatgatgattttgttagtgaaaaag |
106 |
Q |
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| T |
41760809 |
atgaagatgattcaaaagccattgtattcttattaatgctgcatatagtacgtagagttatatggtaggagaaatcatgatgattttgttagtgaaaaag |
41760710 |
T |
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| Q |
107 |
aaaagatgtgagaagagttgagacagag |
134 |
Q |
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| T |
41760709 |
aaaagatgtgagaagagttgagacagag |
41760682 |
T |
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