View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: Solexa-NF5871-41 (Length: 131)
Name: Solexa-NF5871-41
Description: NF5871
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] Solexa-NF5871-41 |
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Alignment Details
Target: chr7 (Bit Score: 109; Significance: 3e-55; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 109; E-Value: 3e-55
Query Start/End: Original strand, 3 - 123
Target Start/End: Original strand, 41760205 - 41760325
Alignment:
| Q |
3 |
atgaatattacaataaatattttccaagtaactttctacacagattaaaagcataaaaatggtatatttgcatataccatagtgtagaaactattaaaca |
102 |
Q |
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| T |
41760205 |
atgaatattacaataaatattttccaagtaactttctacacagattaaaagcataaaaatggtatatttgcatataccatagtgtagaaactattaaaca |
41760304 |
T |
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| Q |
103 |
tagtgttttattaacatgtgt |
123 |
Q |
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||| ||||| ||||| ||||| |
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| T |
41760305 |
tagggttttgttaacctgtgt |
41760325 |
T |
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