View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: Solexa-NF5871-64 (Length: 65)
Name: Solexa-NF5871-64
Description: NF5871
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] Solexa-NF5871-64 |
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| [»] chr7 (2 HSPs) |
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Alignment Details
Target: chr7 (Bit Score: 55; Significance: 2e-23; HSPs: 2)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 55; E-Value: 2e-23
Query Start/End: Original strand, 7 - 65
Target Start/End: Original strand, 26056909 - 26056967
Alignment:
| Q |
7 |
accactaacacaccatattgaatagataacaagcattcaaaaataatgtgtgcaagatc |
65 |
Q |
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| T |
26056909 |
accactaacacaccatattgaatagataacgagcattcaaaaataatgtgtgcaagatc |
26056967 |
T |
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Target: chr7; HSP #2
Raw Score: 55; E-Value: 2e-23
Query Start/End: Original strand, 7 - 65
Target Start/End: Original strand, 26066268 - 26066326
Alignment:
| Q |
7 |
accactaacacaccatattgaatagataacaagcattcaaaaataatgtgtgcaagatc |
65 |
Q |
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|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| |
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| T |
26066268 |
accactaacacaccatattgaatagataacgagcattcaaaaataatgtgtgcaagatc |
26066326 |
T |
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