View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: Solexa-NF5871-71 (Length: 46)
Name: Solexa-NF5871-71
Description: NF5871
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] Solexa-NF5871-71 |
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Alignment Details
Target: chr3 (Bit Score: 36; Significance: 0.000000000003; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 36; E-Value: 0.000000000003
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 51937506 - 51937549
Alignment:
| Q |
1 |
aacaacccgtttgtcacgtggagaacgtcctgtctctggtcctg |
44 |
Q |
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| T |
51937506 |
aacaacccgtttgtcacgtggagaacgtcctgtctttgctcctg |
51937549 |
T |
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