View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: Solexa-NF5875-8 (Length: 212)
Name: Solexa-NF5875-8
Description: NF5875
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] Solexa-NF5875-8 |
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Alignment Details
Target: chr8 (Bit Score: 176; Significance: 2e-95; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 176; E-Value: 2e-95
Query Start/End: Original strand, 8 - 209
Target Start/End: Original strand, 34442413 - 34442614
Alignment:
| Q |
8 |
tattagtagtatattttaatattgaatggatctcaaattcactcatttctctgcaactctcagaatttcatggttttcaagtattaataagaaggtacat |
107 |
Q |
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| T |
34442413 |
tattagtagtatattttaatattgaatggatctcaaattcactcatttctctgcaactctcagaatttcatggttttcaagtattaataagaaggtacat |
34442512 |
T |
|
| Q |
108 |
catatcattcattctcttaaatagtaagcattgagcaatatatactctgaacttagtgtttaattctgtgctcctccwcaatatgtctttcctcctcctt |
207 |
Q |
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| T |
34442513 |
catatcattcattctcttaaacagtaagcattgagcaatatatactctgaacttagtgtttaattctgtgttcctctaatatatgtctttcttcctcctt |
34442612 |
T |
|
| Q |
208 |
tg |
209 |
Q |
| |
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|| |
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| T |
34442613 |
tg |
34442614 |
T |
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