View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: Solexa-NF5876-32 (Length: 130)
Name: Solexa-NF5876-32
Description: NF5876
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] Solexa-NF5876-32 |
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| [»] chr7 (1 HSPs) |
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Alignment Details
Target: chr7 (Bit Score: 107; Significance: 5e-54; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 107; E-Value: 5e-54
Query Start/End: Original strand, 8 - 130
Target Start/End: Complemental strand, 7384328 - 7384206
Alignment:
| Q |
8 |
cctgtaacatctcttcttcaccttatgcaggtcagtacaattctcagtttcattactactgaaataacaggaaaaagaattggatttctcactgctagag |
107 |
Q |
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| T |
7384328 |
cctgtaacatctcttcttcatcttgtgcaggtcagtacaattctcagtttcattactactgaaatatgaggaaaaagaattggatttctcactgctagag |
7384229 |
T |
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| Q |
108 |
tttaggttcatatcttctgaaca |
130 |
Q |
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| T |
7384228 |
tttaggttcatatcttctgaaca |
7384206 |
T |
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