View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: Solexa-NF5876-46 (Length: 122)

Name: Solexa-NF5876-46
Description: NF5876
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] Solexa-NF5876-46
Solexa-NF5876-46
[»] chr1 (44 HSPs)
chr1 (8-122)||(41958142-41958256)
chr1 (8-107)||(33193109-33193208)
chr1 (7-105)||(30678935-30679033)
chr1 (7-122)||(29673533-29673648)
chr1 (8-108)||(26980283-26980383)
chr1 (16-107)||(8899081-8899172)
chr1 (8-101)||(6133653-6133745)
chr1 (8-116)||(44271977-44272085)
chr1 (8-107)||(10659791-10659889)
chr1 (8-107)||(11987685-11987784)
chr1 (8-107)||(19101623-19101722)
chr1 (8-94)||(2225283-2225369)
chr1 (8-100)||(8741252-8741344)
chr1 (18-122)||(35336929-35337033)
chr1 (7-107)||(41948168-41948268)
chr1 (8-122)||(31866375-31866488)
chr1 (7-105)||(45179270-45179368)
chr1 (8-108)||(32211805-32211905)
chr1 (12-107)||(931437-931532)
chr1 (8-107)||(33114030-33114129)
chr1 (7-84)||(6325858-6325934)
chr1 (14-101)||(15928620-15928707)
chr1 (8-99)||(28218078-28218169)
chr1 (17-80)||(49730932-49730995)
chr1 (8-82)||(3872681-3872755)
chr1 (14-86)||(37525594-37525666)
chr1 (45-101)||(37552977-37553033)
chr1 (8-83)||(22540427-22540502)
chr1 (9-107)||(15468280-15468378)
chr1 (8-107)||(15523269-15523364)
chr1 (8-107)||(15531263-15531358)
chr1 (27-114)||(47644310-47644399)
chr1 (62-107)||(25543452-25543497)
chr1 (45-101)||(12767356-12767412)
chr1 (45-100)||(51732373-51732428)
chr1 (17-107)||(27570293-27570383)
chr1 (55-100)||(16948558-16948603)
chr1 (53-122)||(29673678-29673747)
chr1 (63-107)||(39974222-39974266)
chr1 (8-82)||(50539183-50539257)
chr1 (8-104)||(11135798-11135895)
chr1 (7-84)||(39499452-39499529)
chr1 (8-84)||(1093118-1093194)
chr1 (45-97)||(31074812-31074863)
[»] chr3 (47 HSPs)
chr3 (8-107)||(18427172-18427271)
chr3 (8-107)||(52123978-52124077)
chr3 (8-107)||(20493467-20493566)
chr3 (8-107)||(41451917-41452016)
chr3 (8-107)||(24734764-24734863)
chr3 (9-107)||(46450125-46450224)
chr3 (8-107)||(28529312-28529409)
chr3 (8-107)||(37776725-37776824)
chr3 (14-120)||(55452024-55452130)
chr3 (8-107)||(8825001-8825100)
chr3 (8-111)||(41387620-41387723)
chr3 (8-107)||(50156682-50156781)
chr3 (8-97)||(19345032-19345121)
chr3 (29-122)||(24429032-24429125)
chr3 (7-99)||(22604618-22604710)
chr3 (8-107)||(20791355-20791454)
chr3 (8-80)||(26310495-26310567)
chr3 (7-107)||(29588755-29588855)
chr3 (10-102)||(38414708-38414800)
chr3 (7-102)||(15790397-15790491)
chr3 (8-106)||(46161006-46161104)
chr3 (18-96)||(752461-752539)
chr3 (7-107)||(27243103-27243204)
chr3 (7-100)||(48351494-48351587)
chr3 (8-107)||(5452084-5452181)
chr3 (13-101)||(10948588-10948676)
chr3 (7-106)||(44844039-44844139)
chr3 (18-96)||(742025-742103)
chr3 (37-107)||(29388616-29388686)
chr3 (9-107)||(29755560-29755658)
chr3 (7-106)||(13809139-13809239)
chr3 (8-107)||(14236078-14236177)
chr3 (53-107)||(2419486-2419540)
chr3 (12-108)||(46576011-46576108)
chr3 (16-96)||(38138615-38138695)
chr3 (7-107)||(41707462-41707561)
chr3 (45-82)||(49072101-49072138)
chr3 (10-105)||(24748933-24749029)
chr3 (8-107)||(138822-138921)
chr3 (14-101)||(37285348-37285435)
chr3 (7-121)||(50661527-50661644)
chr3 (40-101)||(2009085-2009146)
chr3 (9-82)||(41607471-41607544)
chr3 (45-81)||(22856282-22856318)
chr3 (8-96)||(40715895-40715983)
chr3 (13-104)||(39186028-39186119)
chr3 (45-76)||(42340927-42340958)
[»] chr8 (43 HSPs)
chr8 (7-120)||(8914829-8914942)
chr8 (7-107)||(16983452-16983552)
chr8 (8-104)||(17499258-17499354)
chr8 (8-122)||(32072156-32072270)
chr8 (8-107)||(1977195-1977294)
chr8 (7-114)||(41727488-41727595)
chr8 (8-86)||(8903911-8903989)
chr8 (8-122)||(17741534-17741648)
chr8 (8-107)||(9952779-9952878)
chr8 (8-107)||(24055947-24056046)
chr8 (9-114)||(43506595-43506698)
chr8 (10-107)||(5979941-5980037)
chr8 (8-97)||(28413901-28413990)
chr8 (8-107)||(35151751-35151850)
chr8 (9-108)||(36804860-36804959)
chr8 (7-107)||(13407345-13407446)
chr8 (17-121)||(14236406-14236510)
chr8 (7-122)||(35797453-35797566)
chr8 (45-107)||(7493364-7493426)
chr8 (10-107)||(34952504-34952601)
chr8 (7-106)||(6387619-6387719)
chr8 (16-107)||(6098799-6098890)
chr8 (8-107)||(34861214-34861308)
chr8 (15-82)||(35819198-35819265)
chr8 (13-107)||(13214559-13214653)
chr8 (7-74)||(9192059-9192126)
chr8 (7-82)||(11962729-11962803)
chr8 (8-75)||(17716910-17716977)
chr8 (8-107)||(23685190-23685285)
chr8 (12-114)||(9453525-9453628)
chr8 (45-107)||(4675002-4675064)
chr8 (63-101)||(5095788-5095826)
chr8 (7-67)||(1961340-1961400)
chr8 (8-100)||(31301174-31301265)
chr8 (7-86)||(45246492-45246571)
chr8 (32-108)||(36629740-36629817)
chr8 (63-107)||(17915926-17915970)
chr8 (7-122)||(45524882-45524998)
chr8 (7-69)||(1423804-1423869)
chr8 (9-80)||(3099691-3099762)
chr8 (39-82)||(9193472-9193515)
chr8 (65-104)||(31895324-31895363)
chr8 (90-121)||(36804978-36805009)
[»] chr4 (51 HSPs)
chr4 (7-107)||(50164453-50164553)
chr4 (9-103)||(24834638-24834732)
chr4 (8-122)||(33653496-33653610)
chr4 (8-107)||(39471216-39471315)
chr4 (8-107)||(43771185-43771284)
chr4 (8-107)||(722216-722315)
chr4 (8-107)||(8109015-8109114)
chr4 (11-107)||(754602-754698)
chr4 (11-107)||(26361330-26361426)
chr4 (9-108)||(24938436-24938535)
chr4 (7-93)||(49077307-49077393)
chr4 (8-107)||(49242229-49242328)
chr4 (8-101)||(45310976-45311069)
chr4 (8-107)||(22542440-22542539)
chr4 (8-82)||(31250930-31251004)
chr4 (10-100)||(34129429-34129519)
chr4 (7-84)||(13520007-13520084)
chr4 (7-107)||(20454598-20454696)
chr4 (7-107)||(47009247-47009347)
chr4 (8-82)||(48339387-48339461)
chr4 (8-101)||(5044568-5044661)
chr4 (51-107)||(40991611-40991667)
chr4 (8-114)||(50481562-50481666)
chr4 (9-86)||(20225384-20225461)
chr4 (8-100)||(25719141-25719234)
chr4 (8-73)||(46242000-46242065)
chr4 (45-100)||(37451042-37451097)
chr4 (8-107)||(43124536-43124635)
chr4 (8-107)||(52671889-52671988)
chr4 (8-121)||(16178642-16178756)
chr4 (9-107)||(19937194-19937292)
chr4 (7-118)||(50652343-50652458)
chr4 (8-96)||(10169678-10169766)
chr4 (46-98)||(11895134-11895186)
chr4 (12-107)||(19447194-19447290)
chr4 (40-107)||(52279281-52279348)
chr4 (8-106)||(29699548-29699645)
chr4 (25-98)||(45081773-45081846)
chr4 (65-114)||(54543454-54543503)
chr4 (8-79)||(33995985-33996056)
chr4 (53-107)||(1559936-1559990)
chr4 (8-86)||(4138924-4139002)
chr4 (58-104)||(19321901-19321947)
chr4 (49-107)||(38537535-38537593)
chr4 (7-101)||(38636395-38636489)
chr4 (8-70)||(50571923-50571985)
chr4 (40-81)||(46287532-46287573)
chr4 (8-107)||(30866953-30867053)
chr4 (8-56)||(42862494-42862542)
chr4 (8-96)||(46536295-46536383)
chr4 (13-107)||(5545642-5545737)
[»] chr6 (27 HSPs)
chr6 (8-107)||(34905395-34905494)
chr6 (8-112)||(445877-445981)
chr6 (8-122)||(31116131-31116245)
chr6 (8-122)||(32122854-32122968)
chr6 (8-97)||(16852005-16852094)
chr6 (11-121)||(2675957-2676067)
chr6 (7-107)||(5106356-5106456)
chr6 (15-96)||(10133191-10133272)
chr6 (8-107)||(32112739-32112838)
chr6 (9-107)||(12780781-12780879)
chr6 (8-107)||(21987351-21987450)
chr6 (8-101)||(16187460-16187551)
chr6 (8-101)||(16187678-16187769)
chr6 (30-107)||(8441871-8441948)
chr6 (30-107)||(8450675-8450752)
chr6 (8-105)||(17144695-17144792)
chr6 (8-107)||(1392687-1392785)
chr6 (18-108)||(12753781-12753871)
chr6 (8-107)||(16436124-16436222)
chr6 (14-107)||(32598970-32599063)
chr6 (61-122)||(34882235-34882298)
chr6 (39-86)||(12784982-12785029)
chr6 (8-75)||(31444018-31444085)
chr6 (7-58)||(35128794-35128845)
chr6 (8-82)||(899952-900026)
chr6 (8-105)||(19090238-19090336)
chr6 (8-48)||(2931620-2931660)
[»] chr7 (47 HSPs)
chr7 (7-105)||(27888340-27888438)
chr7 (7-101)||(46517349-46517443)
chr7 (8-107)||(6442224-6442323)
chr7 (9-116)||(12263449-12263556)
chr7 (8-107)||(22189998-22190097)
chr7 (8-107)||(27949332-27949431)
chr7 (8-101)||(11824130-11824223)
chr7 (8-116)||(31502479-31502585)
chr7 (8-107)||(25686857-25686956)
chr7 (8-101)||(32205135-32205228)
chr7 (11-107)||(6580024-6580120)
chr7 (8-107)||(7775059-7775157)
chr7 (8-107)||(11692238-11692337)
chr7 (8-107)||(14795190-14795289)
chr7 (8-107)||(15242182-15242281)
chr7 (7-84)||(9648982-9649059)
chr7 (50-122)||(31874117-31874189)
chr7 (8-96)||(33008163-33008251)
chr7 (16-104)||(27320441-27320529)
chr7 (24-84)||(36845567-36845627)
chr7 (7-107)||(39254141-39254241)
chr7 (8-100)||(44350831-44350923)
chr7 (57-122)||(12167315-12167380)
chr7 (18-107)||(48374461-48374550)
chr7 (8-96)||(32212903-32212990)
chr7 (45-107)||(19422856-19422918)
chr7 (7-104)||(7459401-7459498)
chr7 (7-96)||(10933998-10934087)
chr7 (48-107)||(7774944-7775002)
chr7 (40-107)||(32178826-32178893)
chr7 (54-104)||(36845516-36845566)
chr7 (9-82)||(25092708-25092781)
chr7 (7-106)||(24539145-24539245)
chr7 (27-82)||(3855857-3855912)
chr7 (8-59)||(19494409-19494460)
chr7 (7-111)||(23564049-23564157)
chr7 (57-108)||(38065347-38065398)
chr7 (8-58)||(13919839-13919889)
chr7 (63-100)||(1316387-1316424)
chr7 (54-107)||(30742562-30742615)
chr7 (50-107)||(31628100-31628157)
chr7 (8-85)||(32605390-32605467)
chr7 (8-104)||(45909515-45909612)
chr7 (58-106)||(17749804-17749852)
chr7 (8-59)||(12271045-12271095)
chr7 (50-101)||(31759864-31759915)
chr7 (61-108)||(32943838-32943885)
[»] scaffold0018 (1 HSPs)
scaffold0018 (9-107)||(27872-27970)
[»] chr5 (37 HSPs)
chr5 (7-116)||(10141989-10142098)
chr5 (7-101)||(37455407-37455500)
chr5 (8-107)||(28490744-28490843)
chr5 (7-91)||(39246666-39246750)
chr5 (7-86)||(34368418-34368497)
chr5 (8-121)||(17537110-17537223)
chr5 (8-96)||(5413770-5413858)
chr5 (8-111)||(25710490-25710593)
chr5 (8-105)||(41105594-41105691)
chr5 (7-101)||(28434846-28434938)
chr5 (8-107)||(34384713-34384812)
chr5 (8-107)||(41330415-41330514)
chr5 (8-82)||(25919270-25919344)
chr5 (8-101)||(10950145-10950238)
chr5 (10-102)||(14553573-14553665)
chr5 (8-116)||(28090242-28090350)
chr5 (8-107)||(30325896-30325995)
chr5 (12-82)||(31885878-31885948)
chr5 (28-101)||(28223804-28223877)
chr5 (8-108)||(43405452-43405552)
chr5 (8-82)||(36337937-36338011)
chr5 (7-80)||(25630865-25630938)
chr5 (13-100)||(1923581-1923668)
chr5 (8-98)||(34479982-34480072)
chr5 (8-86)||(27592495-27592573)
chr5 (50-102)||(17434876-17434928)
chr5 (68-116)||(38607164-38607212)
chr5 (19-82)||(4714819-4714882)
chr5 (56-107)||(5465674-5465725)
chr5 (8-58)||(13456236-13456286)
chr5 (8-85)||(28155746-28155821)
chr5 (67-121)||(28434932-28434986)
chr5 (15-105)||(28611802-28611892)
chr5 (45-82)||(4427338-4427375)
chr5 (7-104)||(10666713-10666810)
chr5 (49-108)||(25002026-25002086)
chr5 (65-101)||(41511772-41511808)
[»] chr2 (38 HSPs)
chr2 (8-101)||(9470140-9470233)
chr2 (8-107)||(26767783-26767882)
chr2 (8-107)||(38464222-38464321)
chr2 (8-107)||(12989250-12989349)
chr2 (7-102)||(44274292-44274387)
chr2 (13-107)||(10981582-10981676)
chr2 (18-100)||(15884498-15884580)
chr2 (8-107)||(6980142-6980241)
chr2 (17-117)||(7919280-7919382)
chr2 (7-83)||(18511255-18511331)
chr2 (24-107)||(32856157-32856240)
chr2 (7-94)||(35316436-35316523)
chr2 (45-107)||(45554655-45554717)
chr2 (14-106)||(11539490-11539583)
chr2 (8-104)||(36471863-36471959)
chr2 (14-96)||(34142172-34142254)
chr2 (45-94)||(4552875-4552924)
chr2 (8-81)||(16719478-16719551)
chr2 (8-101)||(19639152-19639245)
chr2 (8-101)||(19837745-19837838)
chr2 (45-106)||(30718350-30718411)
chr2 (7-107)||(25238299-25238400)
chr2 (13-101)||(24497256-24497344)
chr2 (8-100)||(27494480-27494572)
chr2 (30-105)||(472187-472262)
chr2 (45-100)||(14489568-14489623)
chr2 (8-101)||(12098894-12098988)
chr2 (7-104)||(24895291-24895389)
chr2 (8-114)||(3804643-3804750)
chr2 (8-59)||(15508973-15509024)
chr2 (8-95)||(17188124-17188211)
chr2 (8-107)||(37652267-37652366)
chr2 (8-120)||(31395453-31395566)
chr2 (8-97)||(43414414-43414503)
chr2 (8-84)||(30849296-30849372)
chr2 (7-55)||(37228557-37228605)
chr2 (7-82)||(32701528-32701603)
chr2 (7-82)||(45270603-45270678)
[»] scaffold0543 (2 HSPs)
scaffold0543 (8-90)||(9723-9805)
scaffold0543 (67-122)||(9673-9728)
[»] scaffold0492 (2 HSPs)
scaffold0492 (8-90)||(11269-11351)
scaffold0492 (67-122)||(11219-11274)
[»] scaffold0204 (1 HSPs)
scaffold0204 (8-82)||(26909-26983)
[»] scaffold0194 (1 HSPs)
scaffold0194 (46-104)||(8436-8494)


Alignment Details
Target: chr1 (Bit Score: 95; Significance: 6e-47; HSPs: 44)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 95; E-Value: 6e-47
Query Start/End: Original strand, 8 - 122
Target Start/End: Original strand, 41958142 - 41958256
Alignment:
Q  8 aaatcaatgtatgtcccaccattttgtgggggttcagttttcaaagtgtagacccacaatgatttaaaccaataagagattgagtattagagagagtgtt 107  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| |||||||||||||||||||| ||||||||||| ||||||||    
T  41958142 aaatcaatgtatgtcccaccattttgtgggggttcaattttcaaagtgtagacccacagtgatttaaaccaataagagagtgagtattagaaagagtgtt 41958241  T
Q  108 gctagcattcctctt 122  Q
    | |||||||||||||    
T  41958242 gttagcattcctctt 41958256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 80; E-Value: 6e-38
Query Start/End: Original strand, 8 - 107
Target Start/End: Original strand, 33193109 - 33193208
Alignment:
Q  8 aaatcaatgtatgtcccaccattttgtgggggttcagttttcaaagtgtagacccacaatgatttaaaccaataagagattgagtattagagagagtgtt 107  Q
    |||||||||||||| ||||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||    
T  33193109 aaatcaatgtatgtgccaccattttgtgagggttcaattttcaaagtgtagacccacaatgatttaaaccaataagagaatgagtattagagaaagtgtt 33193208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 71; E-Value: 1e-32
Query Start/End: Original strand, 7 - 105
Target Start/End: Complemental strand, 30679033 - 30678935
Alignment:
Q  7 aaaatcaatgtatgtcccaccattttgtgggggttcagttttcaaagtgtagacccacaatgatttaaaccaataagagattgagtattagagagagtg 105  Q
    |||||||||||||||||||||| |||||| ||||||| |||||||||||||||| ||||||||||||| ||||||||||| ||||| ||||||||||||    
T  30679033 aaaatcaatgtatgtcccaccactttgtgtgggttcaattttcaaagtgtagactcacaatgatttaagccaataagagagtgagtgttagagagagtg 30678935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 68; E-Value: 8e-31
Query Start/End: Original strand, 7 - 122
Target Start/End: Original strand, 29673533 - 29673648
Alignment:
Q  7 aaaatcaatgtatgtcccaccattttgtgggggttcagttttcaaagtgtagacccacaatgatttaaaccaataagagattgagtattagagagagtgt 106  Q
    ||||||||| |||||||||||||||||||  | |||| ||||||||||||||| | ||||| |||||||||||||| | | |||||||||||||||||||    
T  29673533 aaaatcaatatatgtcccaccattttgtgtagtttcaattttcaaagtgtagaactacaattatttaaaccaataaaaaagtgagtattagagagagtgt 29673632  T
Q  107 tgctagcattcctctt 122  Q
    |||||||||| |||||    
T  29673633 tgctagcattactctt 29673648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 61; E-Value: 1e-26
Query Start/End: Original strand, 8 - 108
Target Start/End: Complemental strand, 26980383 - 26980283
Alignment:
Q  8 aaatcaatgtatgtcccaccattttgtgggggttcagttttcaaagtgtagacccacaatgatttaaaccaataagagattgagtattagagagagtgtt 107  Q
    |||||||||||||||||||||||||||| | ||||| |||||||| | || | ||||||||||||||| |||||||||| ||||||||| ||||||||||    
T  26980383 aaatcaatgtatgtcccaccattttgtgtgagttcaattttcaaaatatacatccacaatgatttaaatcaataagagagtgagtattatagagagtgtt 26980284  T
Q  108 g 108  Q
    |    
T  26980283 g 26980283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 60; E-Value: 5e-26
Query Start/End: Original strand, 16 - 107
Target Start/End: Original strand, 8899081 - 8899172
Alignment:
Q  16 gtatgtcccaccattttgtgggggttcagttttcaaagtgtagacccacaatgatttaaaccaataagagattgagtattagagagagtgtt 107  Q
    ||||||||||||  |||||| ||||||| ||||||||||||||  ||||||| |||||||||||||||||| ||||||||||||||||||||    
T  8899081 gtatgtcccacccctttgtgtgggttcaattttcaaagtgtaggtccacaataatttaaaccaataagagagtgagtattagagagagtgtt 8899172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 58; E-Value: 7e-25
Query Start/End: Original strand, 8 - 101
Target Start/End: Complemental strand, 6133745 - 6133653
Alignment:
Q  8 aaatcaatgtatgtcccaccattttgtgggggttcagttttcaaagtgtagacccacaatgatttaaaccaataagagattgagtattagagag 101  Q
    |||||||| ||||||||||||| ||||| ||||||| |||||||||| || ||||||||||| |||||||||||||||| ||||||||||||||    
T  6133745 aaatcaatatatgtcccaccatattgtgtgggttcaattttcaaagtctacacccacaatga-ttaaaccaataagagagtgagtattagagag 6133653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 57; E-Value: 3e-24
Query Start/End: Original strand, 8 - 116
Target Start/End: Original strand, 44271977 - 44272085
Alignment:
Q  8 aaatcaatgtatgtcccaccattttgtgggggttcagttttcaaagtgtagacccacaatgatttaaaccaataagagattgagtattagagagagtgtt 107  Q
    |||||||||||||| |||||||||| ||  |||||| ||||||||||||||| | ||||||||||||| |||||| | | ||||||||||| ||||||||    
T  44271977 aaatcaatgtatgttccaccattttttgtaggttcaattttcaaagtgtagaacaacaatgatttaaatcaataaaaaaatgagtattagaaagagtgtt 44272076  T
Q  108 gctagcatt 116  Q
    | |||||||    
T  44272077 gttagcatt 44272085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 56; E-Value: 1e-23
Query Start/End: Original strand, 8 - 107
Target Start/End: Complemental strand, 10659889 - 10659791
Alignment:
Q  8 aaatcaatgtatgtcccaccattttgtgggggttcagttttcaaagtgtagacccacaatgatttaaaccaataagagattgagtattagagagagtgtt 107  Q
    ||||||||| |||||| |||| ||||||  |||||| |||||||||||||||||||| ||||||||||||||||||||| || |||||||||| ||||||    
T  10659889 aaatcaatggatgtccgaccactttgtgtaggttcaattttcaaagtgtagacccacgatgatttaaaccaataagagagtg-gtattagagaaagtgtt 10659791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 56; E-Value: 1e-23
Query Start/End: Original strand, 8 - 107
Target Start/End: Original strand, 11987685 - 11987784
Alignment:
Q  8 aaatcaatgtatgtcccaccattttgtgggggttcagttttcaaagtgtagacccacaatgatttaaaccaataagagattgagtattagagagagtgtt 107  Q
    |||| ||||||||| |||||| || ||| ||||||| |||||||||||||||||||||||||||||||||| ||||||| ||  ||||||| ||||||||    
T  11987685 aaattaatgtatgttccaccacttagtgcgggttcaattttcaaagtgtagacccacaatgatttaaaccattaagagagtggatattagaaagagtgtt 11987784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 56; E-Value: 1e-23
Query Start/End: Original strand, 8 - 107
Target Start/End: Complemental strand, 19101722 - 19101623
Alignment:
Q  8 aaatcaatgtatgtcccaccattttgtgggggttcagttttcaaagtgtagacccacaatgatttaaaccaataagagattgagtattagagagagtgtt 107  Q
    ||||||||||||||||||||| ||| || | ||||  ||||||||||||||| |  ||||||||||||||||||||| | ||||||||||||||||||||    
T  19101722 aaatcaatgtatgtcccaccactttatgcgagttctattttcaaagtgtagatctgcaatgatttaaaccaataagaaagtgagtattagagagagtgtt 19101623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 55; E-Value: 5e-23
Query Start/End: Original strand, 8 - 94
Target Start/End: Original strand, 2225283 - 2225369
Alignment:
Q  8 aaatcaatgtatgtcccaccattttgtgggggttcagttttcaaagtgtagacccacaatgatttaaaccaataagagattgagtat 94  Q
    ||||||||||||||||||||| |||||| |||||| |||| ||||||||||||| ||| |||||||||||||||||| | |||||||    
T  2225283 aaatcaatgtatgtcccaccactttgtgtgggttcggtttacaaagtgtagaccgacagtgatttaaaccaataagaaagtgagtat 2225369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 53; E-Value: 7e-22
Query Start/End: Original strand, 8 - 100
Target Start/End: Complemental strand, 8741344 - 8741252
Alignment:
Q  8 aaatcaatgtatgtcccaccattttgtgggggttcagttttcaaagtgtagacccacaatgatttaaaccaataagagattgagtattagaga 100  Q
    ||||||||||||||| ||| | |||||| ||||||| |||||||||| || || ||||||||||||||| ||||||||| |||||||||||||    
T  8741344 aaatcaatgtatgtctcactaatttgtgtgggttcaattttcaaagtataaacacacaatgatttaaactaataagagagtgagtattagaga 8741252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 53; E-Value: 7e-22
Query Start/End: Original strand, 18 - 122
Target Start/End: Original strand, 35336929 - 35337033
Alignment:
Q  18 atgtcccaccattttgtgggggttcagttttcaaagtgtagacccacaatgatttaaaccaataagagattgagtattagagagagtgttgctagcattc 117  Q
    ||||| ||||| |||||| ||||||| |||||  | ||||||| |||||||||||||||||||||||||  |||||||||||||||||||| || ||||     
T  35336929 atgtctcaccactttgtgtgggttcaattttcttaatgtagacacacaatgatttaaaccaataagagaacgagtattagagagagtgttgataacatta 35337028  T
Q  118 ctctt 122  Q
    |||||    
T  35337029 ctctt 35337033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 53; E-Value: 7e-22
Query Start/End: Original strand, 7 - 107
Target Start/End: Complemental strand, 41948268 - 41948168
Alignment:
Q  7 aaaatcaatgtatgtcccaccattttgtgggggttcagttttcaaagtgtagacccacaatgatttaaaccaataagagattgagtattagagagagtgt 106  Q
    ||||||||||||| | | |||| ||||||  |||||| ||||||||||||| | ||||||||||||||| |||||||||| ||||| |||||||||||||    
T  41948268 aaaatcaatgtatattctaccactttgtgttggttcaattttcaaagtgtaaatccacaatgatttaaatcaataagagagtgagtgttagagagagtgt 41948169  T
Q  107 t 107  Q
    |    
T  41948168 t 41948168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 51; E-Value: 1e-20
Query Start/End: Original strand, 8 - 122
Target Start/End: Original strand, 31866375 - 31866488
Alignment:
Q  8 aaatcaatgtatgtcccaccattttgtgggggttcagttttcaaagtgtagacccacaatgatttaaaccaataagagattgagtattagagagagtgtt 107  Q
    ||||||||||||||||||| ||||| ||  |||||| |||| |||||||| | |||||||||||||||| ||||||| | ||||||||| ||||||| ||    
T  31866375 aaatcaatgtatgtcccactattttttgaaggttcaatttttaaagtgta-atccacaatgatttaaactaataagaaagtgagtattaaagagagtatt 31866473  T
Q  108 gctagcattcctctt 122  Q
    |||| |||| |||||    
T  31866474 gctaacattactctt 31866488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 51; E-Value: 1e-20
Query Start/End: Original strand, 7 - 105
Target Start/End: Complemental strand, 45179368 - 45179270
Alignment:
Q  7 aaaatcaatgtatgtcccaccattttgtgggggttcagttttcaaagtgtagacccacaatgatttaaaccaataagagattgagtattagagagagtg 105  Q
    ||||||||||||||| ||| || |||||| ||||||| ||||||||||||| ||||||||| | |||||  ||||||| | ||||||||||||||||||    
T  45179368 aaaatcaatgtatgttccatcactttgtgagggttcaattttcaaagtgtaaacccacaataacttaaattaataagaaaatgagtattagagagagtg 45179270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 49; E-Value: 2e-19
Query Start/End: Original strand, 8 - 108
Target Start/End: Complemental strand, 32211905 - 32211805
Alignment:
Q  8 aaatcaatgtatgtcccaccattttgtgggggttcagttttcaaagtgtagacccacaatgatttaaaccaataagagattgagtattagagagagtgtt 107  Q
    |||||||||||||||| || | |||||| | ||||| |||| || |||||||||||||||||||||||||||||||||| |||  |||| ||| ||||||    
T  32211905 aaatcaatgtatgtccaactactttgtgtgagttcaatttttaaggtgtagacccacaatgatttaaaccaataagagagtgatcattaaagaaagtgtt 32211806  T
Q  108 g 108  Q
    |    
T  32211805 g 32211805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 48; E-Value: 7e-19
Query Start/End: Original strand, 12 - 107
Target Start/End: Original strand, 931437 - 931532
Alignment:
Q  12 caatgtatgtcccaccattttgtgggggttcagttttcaaagtgtagacccacaatgatttaaaccaataagagattgagtattagagagagtgtt 107  Q
    |||||||||||||| |||||| || ||||||| |||||||| | || |||||||||||||||||||||||| ||| ||| ||||||| | ||||||    
T  931437 caatgtatgtcccatcattttttgtgggttcaattttcaaaatatacacccacaatgatttaaaccaataaaagagtgaatattagaaaaagtgtt 931532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 48; E-Value: 7e-19
Query Start/End: Original strand, 8 - 107
Target Start/End: Original strand, 33114030 - 33114129
Alignment:
Q  8 aaatcaatgtatgtcccaccattttgtgggggttcagttttcaaagtgtagacccacaatgatttaaaccaataagagattgagtattagagagagtgtt 107  Q
    |||||| |||||||||||||||||| ||  |||||| ||||||||||||||| ||| |||||||||||||||||| | | |||||  || ||||||||||    
T  33114030 aaatcattgtatgtcccaccattttatgtaggttcaattttcaaagtgtagatccagaatgatttaaaccaataaaaaagtgagtcctatagagagtgtt 33114129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 46; E-Value: 1e-17
Query Start/End: Original strand, 7 - 84
Target Start/End: Complemental strand, 6325934 - 6325858
Alignment:
Q  7 aaaatcaatgtatgtcccaccattttgtgggggttcagttttcaaagtgtagacccacaatgatttaaaccaataaga 84  Q
    ||||||||||||||||||||||||||||| | ||||  ||||||||||||| |||||||||||| |||||||| ||||    
T  6325934 aaaatcaatgtatgtcccaccattttgtgtgagttc-tttttcaaagtgtaaacccacaatgatgtaaaccaacaaga 6325858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 44; E-Value: 2e-16
Query Start/End: Original strand, 14 - 101
Target Start/End: Original strand, 15928620 - 15928707
Alignment:
Q  14 atgtatgtcccaccattttgtgggggttcagttttcaaagtgtagacccacaatgatttaaaccaataagagattgagtattagagag 101  Q
    ||||||||| |||||||||||| | ||||  ||||||| ||||||||  ||| |||||||||||||||| ||| ||||||||||||||    
T  15928620 atgtatgtctcaccattttgtgtgagttctattttcaaggtgtagacttacagtgatttaaaccaataaaagagtgagtattagagag 15928707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 44; E-Value: 2e-16
Query Start/End: Original strand, 8 - 99
Target Start/End: Complemental strand, 28218169 - 28218078
Alignment:
Q  8 aaatcaatgtatgtcccaccattttgtgggggttcagttttcaaagtgtagacccacaatgatttaaaccaataagagattgagtattagag 99  Q
    ||||||||||||||| ||||| |||||| || |||| ||||||||||||||| ||||| | |||||||  ||||||| | ||||||||||||    
T  28218169 aaatcaatgtatgtctcaccactttgtgtggattcaattttcaaagtgtagaaccacagtaatttaaattaataagatagtgagtattagag 28218078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 44; E-Value: 2e-16
Query Start/End: Original strand, 17 - 80
Target Start/End: Original strand, 49730932 - 49730995
Alignment:
Q  17 tatgtcccaccattttgtgggggttcagttttcaaagtgtagacccacaatgatttaaaccaat 80  Q
    |||||| ||| | |||||| ||||||| ||||||||||||||||||||||||||||||||||||    
T  49730932 tatgtcacactactttgtgtgggttcaattttcaaagtgtagacccacaatgatttaaaccaat 49730995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 43; E-Value: 7e-16
Query Start/End: Original strand, 8 - 82
Target Start/End: Complemental strand, 3872755 - 3872681
Alignment:
Q  8 aaatcaatgtatgtcccaccattttgtgggggttcagttttcaaagtgtagacccacaatgatttaaaccaataa 82  Q
    |||||||| |||||| ||||| ||||||  |||||| ||| ||||||||||||||||||||||| ||||||||||    
T  3872755 aaatcaatatatgtcacaccactttgtgtaggttcaatttccaaagtgtagacccacaatgattcaaaccaataa 3872681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 41; E-Value: 0.00000000000001
Query Start/End: Original strand, 14 - 86
Target Start/End: Original strand, 37525594 - 37525666
Alignment:
Q  14 atgtatgtcccaccattttgtgggggttcagttttcaaagtgtagacccacaatgatttaaaccaataagaga 86  Q
    |||||||| |||||||||| || ||||||| |||||||||| |||| | |||||||||||||| |||||||||    
T  37525594 atgtatgttccaccattttatgtgggttcaattttcaaagtctagatctacaatgatttaaactaataagaga 37525666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 41; E-Value: 0.00000000000001
Query Start/End: Original strand, 45 - 101
Target Start/End: Complemental strand, 37553033 - 37552977
Alignment:
Q  45 ttttcaaagtgtagacccacaatgatttaaaccaataagagattgagtattagagag 101  Q
    ||||||||||||||| ||||||||||||||| |||||||||| ||||||||| ||||    
T  37553033 ttttcaaagtgtagatccacaatgatttaaatcaataagagagtgagtattaaagag 37552977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 40; E-Value: 0.00000000000004
Query Start/End: Original strand, 8 - 83
Target Start/End: Original strand, 22540427 - 22540502
Alignment:
Q  8 aaatcaatgtatgtcccaccattttgtgggggttcagttttcaaagtgtagacccacaatgatttaaaccaataag 83  Q
    ||||||||||||||||||||| ||| || | ||||  ||| ||||||||||| || ||||||||||||||||||||    
T  22540427 aaatcaatgtatgtcccaccactttatgcgagttctatttccaaagtgtagatccgcaatgatttaaaccaataag 22540502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 39; E-Value: 0.0000000000002
Query Start/End: Original strand, 9 - 107
Target Start/End: Original strand, 15468280 - 15468378
Alignment:
Q  9 aatcaatgtatgtcccaccattttgtgggggttcagttttcaaagtgtagacccacaatgatttaaaccaataagagattgagtattagagagagtgtt 107  Q
    |||||||||||||| ||  | |||||| ||||||| |||||| |||||||||||||||| |||||||  ||||| ||| | |||||| |||| ||||||    
T  15468280 aatcaatgtatgtctcattactttgtgtgggttcaattttcatagtgtagacccacaataatttaaattaataaaagagtaagtatttgagatagtgtt 15468378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 39; E-Value: 0.0000000000002
Query Start/End: Original strand, 8 - 107
Target Start/End: Original strand, 15523269 - 15523364
Alignment:
Q  8 aaatcaatgtatgtcccaccattttgtgggggttcagttttcaaagtgtagacccacaatgatttaaaccaataagagattgagtattagagagagtgtt 107  Q
    ||||||||||||||||||||| ||| || | ||||  |||  |||||||||| || ||||||||||||||||||||    | ||||||||||||||||||    
T  15523269 aaatcaatgtatgtcccaccactttatgcgagttctatttctaaagtgtagatccgcaatgatttaaaccaataag----ttagtattagagagagtgtt 15523364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 39; E-Value: 0.0000000000002
Query Start/End: Original strand, 8 - 107
Target Start/End: Original strand, 15531263 - 15531358
Alignment:
Q  8 aaatcaatgtatgtcccaccattttgtgggggttcagttttcaaagtgtagacccacaatgatttaaaccaataagagattgagtattagagagagtgtt 107  Q
    ||||||||||||||||||||| ||| || | ||||  |||  |||||||||| || ||||||||||||||||||||    | ||||||||||||||||||    
T  15531263 aaatcaatgtatgtcccaccactttatgcgagttctatttctaaagtgtagatccgcaatgatttaaaccaataag----ttagtattagagagagtgtt 15531358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 39; E-Value: 0.0000000000002
Query Start/End: Original strand, 27 - 114
Target Start/End: Complemental strand, 47644399 - 47644310
Alignment:
Q  27 cattttgtgggggttcagttttcaaagtgtagacccacaatgatttaaaccaataagagattgagtatt--agagagagtgttgctagca 114  Q
    ||||||||| ||||||  ||||||| ||||| ||||||||||||||||| ||||||||||  |||||||  | ||||||||||| |||||    
T  47644399 cattttgtgtgggttctattttcaatgtgtaaacccacaatgatttaaatcaataagagagcgagtatttaaaagagagtgttgttagca 47644310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 38; E-Value: 0.0000000000006
Query Start/End: Original strand, 62 - 107
Target Start/End: Original strand, 25543452 - 25543497
Alignment:
Q  62 cacaatgatttaaaccaataagagattgagtattagagagagtgtt 107  Q
    ||||||||||||||||||||||| | ||||||||||||||||||||    
T  25543452 cacaatgatttaaaccaataagatagtgagtattagagagagtgtt 25543497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 37; E-Value: 0.000000000003
Query Start/End: Original strand, 45 - 101
Target Start/End: Complemental strand, 12767412 - 12767356
Alignment:
Q  45 ttttcaaagtgtagacccacaatgatttaaaccaataagagattgagtattagagag 101  Q
    |||| ||||||||||| || |||||||||||||||||| ||| ||||||||||||||    
T  12767412 tttttaaagtgtagactcataatgatttaaaccaataaaagagtgagtattagagag 12767356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 36; E-Value: 0.00000000001
Query Start/End: Original strand, 45 - 100
Target Start/End: Original strand, 51732373 - 51732428
Alignment:
Q  45 ttttcaaagtgtagacccacaatgatttaaaccaataagagattgagtattagaga 100  Q
    |||||||||| || ||||||||| |||||||||||||| ||| |||||||||||||    
T  51732373 ttttcaaagtataaacccacaataatttaaaccaataaaagagtgagtattagaga 51732428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 35; E-Value: 0.00000000004
Query Start/End: Original strand, 17 - 107
Target Start/End: Original strand, 27570293 - 27570383
Alignment:
Q  17 tatgtcccaccattttgtgggggttcagttttcaaagtgtagacccacaatgatttaaaccaataagagattgagtattagagagagtgtt 107  Q
    |||||||||||| |||||| | ||| | |||| |||||||| |||||||||||||| ||| ||||||| | ||| | | ||||||||||||    
T  27570293 tatgtcccaccaatttgtgtgagtttaatttttaaagtgtaaacccacaatgatttgaactaataagaaagtgaatttgagagagagtgtt 27570383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 34; E-Value: 0.0000000002
Query Start/End: Original strand, 55 - 100
Target Start/End: Complemental strand, 16948603 - 16948558
Alignment:
Q  55 gtagacccacaatgatttaaaccaataagagattgagtattagaga 100  Q
    ||||| ||||||||||||||| |||||||||| |||||||||||||    
T  16948603 gtagatccacaatgatttaaatcaataagagagtgagtattagaga 16948558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 34; E-Value: 0.0000000002
Query Start/End: Original strand, 53 - 122
Target Start/End: Original strand, 29673678 - 29673747
Alignment:
Q  53 gtgtagacccacaatgatttaaaccaataagagattgagtattagagagagtgttgctagcattcctctt 122  Q
    ||||||| | ||||| |||||||||||||| | | ||| |||||||||||||||| |||||||| |||||    
T  29673678 gtgtagaactacaattatttaaaccaataaaaaagtgaatattagagagagtgttactagcattactctt 29673747  T

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Target: chr1; HSP #39
Raw Score: 33; E-Value: 0.0000000006
Query Start/End: Original strand, 63 - 107
Target Start/End: Complemental strand, 39974266 - 39974222
Alignment:
Q  63 acaatgatttaaaccaataagagattgagtattagagagagtgtt 107  Q
    |||||||||||||||||||||||| ||||||||||| ||| ||||    
T  39974266 acaatgatttaaaccaataagagagtgagtattagaaagaatgtt 39974222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 31; E-Value: 0.00000001
Query Start/End: Original strand, 8 - 82
Target Start/End: Original strand, 50539183 - 50539257
Alignment:
Q  8 aaatcaatgtatgtcccaccattttgtgggggttcagttttcaaagtgtagacccacaatgatttaaaccaataa 82  Q
    ||||||| |||||| |||||| ||| || ||||||| |||||  ||||||||| | ||||||||||||| |||||    
T  50539183 aaatcaaagtatgttccaccactttatgtgggttcaattttctcagtgtagacacgcaatgatttaaactaataa 50539257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 30; E-Value: 0.00000004
Query Start/End: Original strand, 8 - 104
Target Start/End: Original strand, 11135798 - 11135895
Alignment:
Q  8 aaatcaatgtatgtcccaccattttgtgggggttcagttttcaaagtgta-gacccacaatgatttaaaccaataagagattgagtattagagagagt 104  Q
    ||||||||||||||||||||| ||| || ||||||  ||| ||||||||| | || ||| |||||| | ||||||| ||| |||||  ||||||||||    
T  11135798 aaatcaatgtatgtcccaccactttatgtgggttccatttccaaagtgtaggtcctacattgatttcacccaataaaagagtgagtgctagagagagt 11135895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 30; E-Value: 0.00000004
Query Start/End: Original strand, 7 - 84
Target Start/End: Original strand, 39499452 - 39499529
Alignment:
Q  7 aaaatcaatgtatgtcccaccattttgtgggggttcagttttcaaagtgtagacccacaatgatttaaaccaataaga 84  Q
    ||||||||||||||||  | || ||| || | ||||| |||||||| |||||| ||||||||||||||  ||||||||    
T  39499452 aaaatcaatgtatgtcatatcactttttgtgagttcaattttcaaaatgtagatccacaatgatttaattcaataaga 39499529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 29; E-Value: 0.0000002
Query Start/End: Original strand, 8 - 84
Target Start/End: Complemental strand, 1093194 - 1093118
Alignment:
Q  8 aaatcaatgtatgtcccaccattttgtgggggttcagttttcaaagtgtagacccacaatgatttaaaccaataaga 84  Q
    |||||||||||||| |||||| |||||  | |||   ||| ||||||||||  |||||||||||||||| |||||||    
T  1093194 aaatcaatgtatgttccaccactttgtatgagttatatttccaaagtgtagttccacaatgatttaaactaataaga 1093118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 29; E-Value: 0.0000002
Query Start/End: Original strand, 45 - 97
Target Start/End: Original strand, 31074812 - 31074863
Alignment:
Q  45 ttttcaaagtgtagacccacaatgatttaaaccaataagagattgagtattag 97  Q
    |||||||| |||||||||||||||| ||| |||||||||||| || |||||||    
T  31074812 ttttcaaaatgtagacccacaatga-ttagaccaataagagagtgggtattag 31074863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 80; Significance: 6e-38; HSPs: 47)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 80; E-Value: 6e-38
Query Start/End: Original strand, 8 - 107
Target Start/End: Complemental strand, 18427271 - 18427172
Alignment:
Q  8 aaatcaatgtatgtcccaccattttgtgggggttcagttttcaaagtgtagacccacaatgatttaaaccaataagagattgagtattagagagagtgtt 107  Q
    |||||||||||||||||||||||||||| ||||||  |||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |||||    
T  18427271 aaatcaatgtatgtcccaccattttgtgtgggttctattttcaaagtgtagacccacaatgatttaaaccaataagagagtgagtattagagagggtgtt 18427172  T

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Target: chr3; HSP #2
Raw Score: 80; E-Value: 6e-38
Query Start/End: Original strand, 8 - 107
Target Start/End: Complemental strand, 52124077 - 52123978
Alignment:
Q  8 aaatcaatgtatgtcccaccattttgtgggggttcagttttcaaagtgtagacccacaatgatttaaaccaataagagattgagtattagagagagtgtt 107  Q
    |||| |||||||||||||| |||||||||||||||| |||||||||||||||||||||||||||||||||||||||| | ||||||||||||||||||||    
T  52124077 aaattaatgtatgtcccactattttgtgggggttcaattttcaaagtgtagacccacaatgatttaaaccaataagaaagtgagtattagagagagtgtt 52123978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 76; E-Value: 1e-35
Query Start/End: Original strand, 8 - 107
Target Start/End: Complemental strand, 20493566 - 20493467
Alignment:
Q  8 aaatcaatgtatgtcccaccattttgtgggggttcagttttcaaagtgtagacccacaatgatttaaaccaataagagattgagtattagagagagtgtt 107  Q
    |||||||||||||||| |||| |||||||||||||| | |||||||||||||||||||||||||||||||||||||||| |||||| |||||||||||||    
T  20493566 aaatcaatgtatgtcctaccactttgtgggggttcaatattcaaagtgtagacccacaatgatttaaaccaataagagagtgagtaatagagagagtgtt 20493467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 76; E-Value: 1e-35
Query Start/End: Original strand, 8 - 107
Target Start/End: Complemental strand, 41452016 - 41451917
Alignment:
Q  8 aaatcaatgtatgtcccaccattttgtgggggttcagttttcaaagtgtagacccacaatgatttaaaccaataagagattgagtattagagagagtgtt 107  Q
    ||||||| ||||||||||||| |||||| ||||||| ||||||||| |||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  41452016 aaatcaaagtatgtcccaccactttgtgtgggttcaattttcaaagagtagacccacaatgatttaaaccaataagagagtgagtattagagagagtgtt 41451917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 72; E-Value: 3e-33
Query Start/End: Original strand, 8 - 107
Target Start/End: Original strand, 24734764 - 24734863
Alignment:
Q  8 aaatcaatgtatgtcccaccattttgtgggggttcagttttcaaagtgtagacccacaatgatttaaaccaataagagattgagtattagagagagtgtt 107  Q
    ||||||| ||||||||||||| |||||| ||||||| ||||||||| |||| ||||||||||||||||||||||||||| ||||||||||||||||||||    
T  24734764 aaatcaaagtatgtcccaccactttgtgtgggttcaattttcaaagagtaggcccacaatgatttaaaccaataagagagtgagtattagagagagtgtt 24734863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 72; E-Value: 3e-33
Query Start/End: Original strand, 9 - 107
Target Start/End: Original strand, 46450125 - 46450224
Alignment:
Q  9 aatcaatgtatgtcccacca-ttttgtgggggttcagttttcaaagtgtagacccacaatgatttaaaccaataagagattgagtattagagagagtgtt 107  Q
    |||||||||||||||||||| ||||||| ||||||  ||| |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  46450125 aatcaatgtatgtcccaccacttttgtgtgggttctatttgcaaagtgtagacccacaatgatttaaaccaataagagagtgagtattagagagagtgtt 46450224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 69; E-Value: 2e-31
Query Start/End: Original strand, 8 - 107
Target Start/End: Original strand, 28529312 - 28529409
Alignment:
Q  8 aaatcaatgtatgtcccaccattttgtgggggttcagttttcaaagtgtagacccacaatgatttaaaccaataagagattgagtattagagagagtgtt 107  Q
    ||||||||||||||||||||| | ||||||  |||| |||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |||||    
T  28529312 aaatcaatgtatgtcccaccactgtgtggg--ttcaattttcaaagtgtagacccacaatgatttaaaccaataagagagtgagtattagagagggtgtt 28529409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 68; E-Value: 8e-31
Query Start/End: Original strand, 8 - 107
Target Start/End: Complemental strand, 37776824 - 37776725
Alignment:
Q  8 aaatcaatgtatgtcccaccattttgtgggggttcagttttcaaagtgtagacccacaatgatttaaaccaataagagattgagtattagagagagtgtt 107  Q
    |||||||||||||||| |||| |||||| ||||||| ||||||||||||||||| |||||||||||||||| ||||||| |||||||||||||| |||||    
T  37776824 aaatcaatgtatgtcctaccactttgtgtgggttcaattttcaaagtgtagacctacaatgatttaaaccactaagagagtgagtattagagagggtgtt 37776725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 67; E-Value: 3e-30
Query Start/End: Original strand, 14 - 120
Target Start/End: Complemental strand, 55452130 - 55452024
Alignment:
Q  14 atgtatgtcccaccattttgtgggggttcagttttcaaagtgtagacccacaatgatttaaaccaataagagattgagtattagagagagtgttgctagc 113  Q
    ||||||||||||||| |||||| ||||||  ||| |||||||||||| || |||||||||||||||| | ||| ||||||||||||||||||||||||||    
T  55452130 atgtatgtcccaccactttgtgtgggttctatttccaaagtgtagactcataatgatttaaaccaatgaaagagtgagtattagagagagtgttgctagc 55452031  T
Q  114 attcctc 120  Q
    |||||||    
T  55452030 attcctc 55452024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 60; E-Value: 5e-26
Query Start/End: Original strand, 8 - 107
Target Start/End: Complemental strand, 8825100 - 8825001
Alignment:
Q  8 aaatcaatgtatgtcccaccattttgtgggggttcagttttcaaagtgtagacccacaatgatttaaaccaataagagattgagtattagagagagtgtt 107  Q
    |||||||| |||||||||||||||| || ||||||| |||||||||| || || |||||| |||||||||||||||||| ||||||||| ||||||||||    
T  8825100 aaatcaatatatgtcccaccattttatgcgggttcaattttcaaagtctacactcacaataatttaaaccaataagagagtgagtattaaagagagtgtt 8825001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 60; E-Value: 5e-26
Query Start/End: Original strand, 8 - 111
Target Start/End: Original strand, 41387620 - 41387723
Alignment:
Q  8 aaatcaatgtatgtcccaccattttgtgggggttcagttttcaaagtgtagacccacaatgatttaaaccaataagagattgagtattagagagagtgtt 107  Q
    ||||| |||||| || ||| |||||||| ||||| | ||||||||||| |||||||||||||||||| | |||||||||||||||||| |||||||||||    
T  41387620 aaatcgatgtatatcacactattttgtgtgggtttaattttcaaagtgcagacccacaatgatttaatcaaataagagattgagtattggagagagtgtt 41387719  T
Q  108 gcta 111  Q
    ||||    
T  41387720 gcta 41387723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 60; E-Value: 5e-26
Query Start/End: Original strand, 8 - 107
Target Start/End: Complemental strand, 50156781 - 50156682
Alignment:
Q  8 aaatcaatgtatgtcccaccattttgtgggggttcagttttcaaagtgtagacccacaatgatttaaaccaataagagattgagtattagagagagtgtt 107  Q
    |||| ||||||||| |||| | |||| ||||||||| |||| ||||||||||||||||||||||||||||||||||||| ||||||||| | ||||||||    
T  50156781 aaattaatgtatgttccacaactttgcgggggttcaattttaaaagtgtagacccacaatgatttaaaccaataagagagtgagtattacaaagagtgtt 50156682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 58; E-Value: 7e-25
Query Start/End: Original strand, 8 - 97
Target Start/End: Complemental strand, 19345121 - 19345032
Alignment:
Q  8 aaatcaatgtatgtcccaccattttgtgggggttcagttttcaaagtgtagacccacaatgatttaaaccaataagagattgagtattag 97  Q
    ||||||||||||||||||||| ||||| |||||||| |||||||| ||||||| ||||||||||||||||||||| ||| | ||||||||    
T  19345121 aaatcaatgtatgtcccaccactttgttggggttcaattttcaaattgtagactcacaatgatttaaaccaataaaagaataagtattag 19345032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 58; E-Value: 7e-25
Query Start/End: Original strand, 29 - 122
Target Start/End: Complemental strand, 24429125 - 24429032
Alignment:
Q  29 ttttgtgggggttcagttttcaaagtgtagacccacaatgatttaaaccaataagagattgagtattagagagagtgttgctagcattcctctt 122  Q
    ||||||| ||||||| |||| |||||||||| |||||||||||||||||||||| | | ||||||||||||||||| ||||||||||| |||||    
T  24429125 ttttgtgagggttcaatttttaaagtgtagatccacaatgatttaaaccaataaaatagtgagtattagagagagtattgctagcattactctt 24429032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 57; E-Value: 3e-24
Query Start/End: Original strand, 7 - 99
Target Start/End: Original strand, 22604618 - 22604710
Alignment:
Q  7 aaaatcaatgtatgtcccaccattttgtgggggttcagttttcaaagtgtagacccacaatgatttaaaccaataagagattgagtattagag 99  Q
    ||||| ||||||||||||||||||||||||| ||||| |||||||| ||||||| |||||||||||||||  |||||||| |||| |||||||    
T  22604618 aaaattaatgtatgtcccaccattttgtgggagttcaattttcaaaatgtagactcacaatgatttaaacttataagagagtgagaattagag 22604710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 56; E-Value: 1e-23
Query Start/End: Original strand, 8 - 107
Target Start/End: Original strand, 20791355 - 20791454
Alignment:
Q  8 aaatcaatgtatgtcccaccattttgtgggggttcagttttcaaagtgtagacccacaatgatttaaaccaataagagattgagtattagagagagtgtt 107  Q
    ||||||||||||||||||||| ||| || | ||||  ||| ||||||||||| || ||||||||||||||||||||| | ||||||||||||||||||||    
T  20791355 aaatcaatgtatgtcccaccactttatgcgagttctatttccaaagtgtagatccgcaatgatttaaaccaataagaaagtgagtattagagagagtgtt 20791454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 53; E-Value: 7e-22
Query Start/End: Original strand, 8 - 80
Target Start/End: Complemental strand, 26310567 - 26310495
Alignment:
Q  8 aaatcaatgtatgtcccaccattttgtgggggttcagttttcaaagtgtagacccacaatgatttaaaccaat 80  Q
    ||||||||||||||||||||||||| ||  |||||| ||||||||||||||||||| ||||||||||||||||    
T  26310567 aaatcaatgtatgtcccaccattttttgttggttcaattttcaaagtgtagacccataatgatttaaaccaat 26310495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 53; E-Value: 7e-22
Query Start/End: Original strand, 7 - 107
Target Start/End: Complemental strand, 29588855 - 29588755
Alignment:
Q  7 aaaatcaatgtatgtcccaccattttgtgggggttcagttttcaaagtgtagacccacaatgatttaaaccaataagagattgagtattagagagagtgt 106  Q
    |||||||||||||||||   || ||| || | ||||| ||||||||||||||||||||||||||||||| |||||||||| ||||| ||| |||||||||    
T  29588855 aaaatcaatgtatgtcctttcactttatgtgagttcaattttcaaagtgtagacccacaatgatttaaatcaataagagagtgagtgttatagagagtgt 29588756  T
Q  107 t 107  Q
    |    
T  29588755 t 29588755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 53; E-Value: 7e-22
Query Start/End: Original strand, 10 - 102
Target Start/End: Original strand, 38414708 - 38414800
Alignment:
Q  10 atcaatgtatgtcccaccattttgtgggggttcagttttcaaagtgtagacccacaatgatttaaaccaataagagattgagtattagagaga 102  Q
    |||||||||||||||||||||||||| ||||| | |||| |||||||||| |||| || |||||||||||||||||| ||||| ||| |||||    
T  38414708 atcaatgtatgtcccaccattttgtgtgggtttaatttttaaagtgtagatccacgataatttaaaccaataagagagtgagtgttaaagaga 38414800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 52; E-Value: 3e-21
Query Start/End: Original strand, 7 - 102
Target Start/End: Complemental strand, 15790491 - 15790397
Alignment:
Q  7 aaaatcaatgtatgtcccaccattttgtgggggttcagttttcaaagtgtagacccacaatgatttaaaccaataagagattgagtattagagaga 102  Q
    |||||||||||||||| ||||||||| ||| ||  || |||||||||||||| || | |||||||||||||||||||||| |||||||||||||||    
T  15790491 aaaatcaatgtatgtctcaccattttatggtgggacaattttcaaagtgtaggcc-ataatgatttaaaccaataagagagtgagtattagagaga 15790397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 51; E-Value: 1e-20
Query Start/End: Original strand, 8 - 106
Target Start/End: Original strand, 46161006 - 46161104
Alignment:
Q  8 aaatcaatgtatgtcccaccattttgtgggggttcagttttcaaagtgtagacccacaatgatttaaaccaataagagattgagtattagagagagtgt 106  Q
    ||||||||  |||||| |||| ||||||  |||||  ||| ||||||||||| ||| |||||||||||||||||||||| |||||||||||||||||||    
T  46161006 aaatcaatacatgtccgaccactttgtgttggttctatttccaaagtgtagatccataatgatttaaaccaataagagagtgagtattagagagagtgt 46161104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 47; E-Value: 3e-18
Query Start/End: Original strand, 18 - 96
Target Start/End: Original strand, 752461 - 752539
Alignment:
Q  18 atgtcccaccattttgtgggggttcagttttcaaagtgtagacccacaatgatttaaaccaataagagattgagtatta 96  Q
    ||||||||||| |||||| ||||||  |||  ||||||||||||||||||||||||||| ||||||||| |||||||||    
T  752461 atgtcccaccactttgtgtgggttctatttctaaagtgtagacccacaatgatttaaactaataagagaatgagtatta 752539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 46; E-Value: 1e-17
Query Start/End: Original strand, 7 - 107
Target Start/End: Original strand, 27243103 - 27243204
Alignment:
Q  7 aaaatcaatgtatgtcccaccattttgtgggggttcagttttcaaagtgta-gacccacaatgatttaaaccaataagagattgagtattagagagagtg 105  Q
    |||||||||| ||||||||||| ||| || ||||||  ||| ||||||||| |||||||| |||||||| ||||| ||||| ||||||||||| ||||||    
T  27243103 aaaatcaatgcatgtcccaccactttatgtgggttccatttccaaagtgtatgacccacattgatttaacccaatgagagagtgagtattagaaagagtg 27243202  T
Q  106 tt 107  Q
    ||    
T  27243203 tt 27243204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 46; E-Value: 1e-17
Query Start/End: Original strand, 7 - 100
Target Start/End: Original strand, 48351494 - 48351587
Alignment:
Q  7 aaaatcaatgtatgtcccaccattttgtgggggttcagttttcaaagtgtagacccacaatgatttaaaccaataagagattgagtattagaga 100  Q
    ||||||||| |||||| ||| | |||||| ||||||| ||||||||||||| | ||| ||||||||||| ||||||||||  ||||||||||||    
T  48351494 aaaatcaatatatgtctcactactttgtgtgggttcaattttcaaagtgtatatccataatgatttaaatcaataagagaaagagtattagaga 48351587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 45; E-Value: 4e-17
Query Start/End: Original strand, 8 - 107
Target Start/End: Complemental strand, 5452181 - 5452084
Alignment:
Q  8 aaatcaatgtatgtcccaccattttgtgggggttcagttttcaaagtgtagacccacaatgatttaaaccaataagagattgagtattagagagagtgtt 107  Q
    |||||||||||| |||||||| |||||| || |||| ||||| |||||||||||  ||| |||||||| ||||||||||  ||||||| |||||||||||    
T  5452181 aaatcaatgtatttcccaccactttgtgtggattcaattttctaagtgtagacc--caaggatttaaatcaataagagagcgagtattggagagagtgtt 5452084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 45; E-Value: 4e-17
Query Start/End: Original strand, 13 - 101
Target Start/End: Complemental strand, 10948676 - 10948588
Alignment:
Q  13 aatgtatgtcccaccattttgtgggggttcagttttcaaagtgtagacccacaatgatttaaaccaataagagattgagtattagagag 101  Q
    ||||||||| |||||| ||||||   ||||| |||| |||||||| |||||||||||||||||||||||| ||| ||||||||| ||||    
T  10948676 aatgtatgttccaccactttgtgtttgttcaatttttaaagtgtaaacccacaatgatttaaaccaataaaagagtgagtattaaagag 10948588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 45; E-Value: 4e-17
Query Start/End: Original strand, 7 - 106
Target Start/End: Original strand, 44844039 - 44844139
Alignment:
Q  7 aaaatcaatgtatgtcccaccattttgtgggggttcagttttcaaagtgta-gacccacaatgatttaaaccaataagagattgagtattagagagagtg 105  Q
    ||||| |||||||||||||||||||  || | ||||| |||| |||||||| ||||||||||||||||| ||||||| | | ||||| ||||||||||||    
T  44844039 aaaataaatgtatgtcccaccatttcatgtgagttcaatttttaaagtgtatgacccacaatgatttaatccaataaaaaagtgagtgttagagagagtg 44844138  T
Q  106 t 106  Q
    |    
T  44844139 t 44844139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 43; E-Value: 7e-16
Query Start/End: Original strand, 18 - 96
Target Start/End: Original strand, 742025 - 742103
Alignment:
Q  18 atgtcccaccattttgtgggggttcagttttcaaagtgtagacccacaatgatttaaaccaataagagattgagtatta 96  Q
    ||||||||||| |||||| || |||  |||  ||||||||||||||||||||||||||| ||||||||| |||||||||    
T  742025 atgtcccaccactttgtgtggattctatttctaaagtgtagacccacaatgatttaaactaataagagaatgagtatta 742103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 43; E-Value: 7e-16
Query Start/End: Original strand, 37 - 107
Target Start/End: Complemental strand, 29388686 - 29388616
Alignment:
Q  37 gggttcagttttcaaagtgtagacccacaatgatttaaaccaataagagattgagtattagagagagtgtt 107  Q
    ||||||| |||||||||||||||| |||||||||||||  |||||||||| || || ||||||||||||||    
T  29388686 gggttcaattttcaaagtgtagactcacaatgatttaagtcaataagagagtgggtgttagagagagtgtt 29388616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 43; E-Value: 7e-16
Query Start/End: Original strand, 9 - 107
Target Start/End: Original strand, 29755560 - 29755658
Alignment:
Q  9 aatcaatgtatgtcccaccattttgtgggggttcagttttcaaagtgtagacccacaatgatttaaaccaataagagattgagtattagagagagtgtt 107  Q
    ||||||| |||||  ||| | |||||| ||||||| ||||||||||||||| | |||||||||||||||||||||||  |  ||||||||| |||||||    
T  29755560 aatcaatatatgtttcactactttgtgtgggttcaattttcaaagtgtagatcaacaatgatttaaaccaataagagggtaggtattagagggagtgtt 29755658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 41; E-Value: 0.00000000000001
Query Start/End: Original strand, 7 - 106
Target Start/End: Original strand, 13809139 - 13809239
Alignment:
Q  7 aaaatcaatgtatgtcccaccattttgtgggggttcagttttcaaagtgta-gacccacaatgatttaaaccaataagagattgagtattagagagagtg 105  Q
    |||||||||||||||||||||||||| || ||||||  ||| |||||| || |||||||| || ||||| ||||||||||| ||| | ||||||| ||||    
T  13809139 aaaatcaatgtatgtcccaccattttatgtgggttccatttccaaagtatatgacccacattgttttaacccaataagagaatgaatgttagagaaagtg 13809238  T
Q  106 t 106  Q
    |    
T  13809239 t 13809239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 40; E-Value: 0.00000000000004
Query Start/End: Original strand, 8 - 107
Target Start/End: Original strand, 14236078 - 14236177
Alignment:
Q  8 aaatcaatgtatgtcccaccattttgtgggggttcagttttcaaagtgtagacccacaatgatttaaaccaataagagattgagtattagagagagtgtt 107  Q
    |||||||| |||||||||||| ||| || | ||||  ||| ||||||||||| ||||||| ||||| |||||||| | | ||||||||||| ||||||||    
T  14236078 aaatcaatatatgtcccaccactttatgcgagttctatttccaaagtgtagatccacaataatttagaccaataaaaaagtgagtattagaaagagtgtt 14236177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 39; E-Value: 0.0000000000002
Query Start/End: Original strand, 53 - 107
Target Start/End: Complemental strand, 2419540 - 2419486
Alignment:
Q  53 gtgtagacccacaatgatttaaaccaataagagattgagtattagagagagtgtt 107  Q
    |||||||||||||||||||||||||||||||| | ||||||||| ||| ||||||    
T  2419540 gtgtagacccacaatgatttaaaccaataagaaagtgagtattaaagaaagtgtt 2419486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 38; E-Value: 0.0000000000006
Query Start/End: Original strand, 12 - 108
Target Start/End: Original strand, 46576011 - 46576108
Alignment:
Q  12 caatgtatgtcccaccattttgtgggggttcagttttcaaagtgta-gacccacaatgatttaaaccaataagagattgagtattagagagagtgttg 108  Q
    ||||||||||||||||| ||| || ||||||  |||||||| |||| | |||||| |||||||| || || ||||| ||||||||| |||||||||||    
T  46576011 caatgtatgtcccaccactttttgtgggttccattttcaaaatgtacgccccacattgatttaaccctattagagagtgagtattaaagagagtgttg 46576108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 37; E-Value: 0.000000000003
Query Start/End: Original strand, 16 - 96
Target Start/End: Complemental strand, 38138695 - 38138615
Alignment:
Q  16 gtatgtcccaccattttgtgggggttcagttttcaaagtgtagacccacaatgatttaaaccaataagagattgagtatta 96  Q
    |||| |||||||||||||||  | |||  | |||||||| |||| |||||||||||||||||||||||||| | |||||||    
T  38138695 gtatatcccaccattttgtgtagtttctatcttcaaagtatagatccacaatgatttaaaccaataagagagtaagtatta 38138615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 37; E-Value: 0.000000000003
Query Start/End: Original strand, 7 - 107
Target Start/End: Complemental strand, 41707561 - 41707462
Alignment:
Q  7 aaaatcaatgtatgtcccaccattttgtgggggttcagttttcaaagtgtagacccacaatgatttaaaccaataagagattgagtattagagagagtgt 106  Q
    |||||||||||||||  || || |||||| ||||||| |||| ||||| |||||||||||| ||||||||| |||||| | | ||| ||| |||||||||    
T  41707561 aaaatcaatgtatgtttcatcactttgtgtgggttcaatttttaaagtatagacccacaataatttaaacc-ataagaaaataagtgttaaagagagtgt 41707463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 34; E-Value: 0.0000000002
Query Start/End: Original strand, 45 - 82
Target Start/End: Original strand, 49072101 - 49072138
Alignment:
Q  45 ttttcaaagtgtagacccacaatgatttaaaccaataa 82  Q
    ||||||||||||||||||||||| ||||||||||||||    
T  49072101 ttttcaaagtgtagacccacaataatttaaaccaataa 49072138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 33; E-Value: 0.0000000006
Query Start/End: Original strand, 10 - 105
Target Start/End: Complemental strand, 24749029 - 24748933
Alignment:
Q  10 atcaatgtatgtcccaccattttgtgggggttcagttttcaaagtgta-gacccacaatgatttaaaccaataagagattgagtattagagagagtg 105  Q
    ||||||||||||||||||||||| || ||||||  |||  |||||||| | || ||| |||||| | ||||||| ||| ||||| ||||||||||||    
T  24749029 atcaatgtatgtcccaccattttatgtgggttccatttctaaagtgtaggtcctacattgatttcatccaataaaagagtgagtgttagagagagtg 24748933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 32; E-Value: 0.000000002
Query Start/End: Original strand, 8 - 107
Target Start/End: Original strand, 138822 - 138921
Alignment:
Q  8 aaatcaatgtatgtcccaccattttgtgggggttcagttttcaaagtgtagacccacaatgatttaaaccaataagagattgagtattagagagagtgtt 107  Q
    ||||||||||||||| |||||||||||  |  |||| |||| ||| |||| ||  ||||||||||||| |||||| ||| | ||||||| |||| |||||    
T  138822 aaatcaatgtatgtctcaccattttgtatgtattcaatttttaaaatgtaaacttacaatgatttaaatcaataaaagagtaagtattaaagagggtgtt 138921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 32; E-Value: 0.000000002
Query Start/End: Original strand, 14 - 101
Target Start/End: Original strand, 37285348 - 37285435
Alignment:
Q  14 atgtatgtcccaccattttgtgggggttcagttttcaaagtgtagacccacaatgatttaaaccaataagagattgagtattagagag 101  Q
    ||||||||| ||||||||| |  |||||   |||| |||||| ||||||||||| |||||||||||||| | | | ||||||||||||    
T  37285348 atgtatgtcgcaccattttttatgggttttatttttaaagtgcagacccacaataatttaaaccaataaaaaagtaagtattagagag 37285435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 31; E-Value: 0.00000001
Query Start/End: Original strand, 7 - 121
Target Start/End: Complemental strand, 50661644 - 50661527
Alignment:
Q  7 aaaatcaatgtatgtcccaccattttgtgggggttcagttttcaaagtgta-gacccacaatgatttaaaccaataagagattgagtatt--agagagag 103  Q
    |||||||||| ||||||||||| ||| || ||||||  ||| |||| |||| |||||||| |||||||| ||||||| |||  |||| ||  | ||||||    
T  50661644 aaaatcaatgcatgtcccaccactttatgtgggttccatttccaaaatgtatgacccacattgatttaacccaataaaagaaagagtgttcaaaagagag 50661545  T
Q  104 tgttgctagcattcctct 121  Q
    ||||| ||||| ||||||    
T  50661544 tgttgatagcagtcctct 50661527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 30; E-Value: 0.00000004
Query Start/End: Original strand, 40 - 101
Target Start/End: Original strand, 2009085 - 2009146
Alignment:
Q  40 ttcagttttcaaagtgtagacccacaatgatttaaaccaataagagattgagtattagagag 101  Q
    ||||||||| ||||||||||| |||||| ||||||| |||||| | | ||| ||||||||||    
T  2009085 ttcagtttttaaagtgtagactcacaataatttaaatcaataaaaaaatgaatattagagag 2009146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 30; E-Value: 0.00000004
Query Start/End: Original strand, 9 - 82
Target Start/End: Original strand, 41607471 - 41607544
Alignment:
Q  9 aatcaatgtatgtcccaccattttgtgggggttcagttttcaaagtgtagacccacaatgatttaaaccaataa 82  Q
    ||||||| |||||| ||| |||||||| | ||| | ||||||||||||||| ||||| | ||||||| ||||||    
T  41607471 aatcaatatatgtctcactattttgtgtgagtttaattttcaaagtgtagatccacagttatttaaatcaataa 41607544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 29; E-Value: 0.0000002
Query Start/End: Original strand, 45 - 81
Target Start/End: Complemental strand, 22856318 - 22856282
Alignment:
Q  45 ttttcaaagtgtagacccacaatgatttaaaccaata 81  Q
    ||||||||||||||| ||||||| |||||||||||||    
T  22856318 ttttcaaagtgtagatccacaattatttaaaccaata 22856282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 29; E-Value: 0.0000002
Query Start/End: Original strand, 8 - 96
Target Start/End: Complemental strand, 40715983 - 40715895
Alignment:
Q  8 aaatcaatgtatgtcccaccattttgtgggggttcagttttcaaagtgtagacccacaatgatttaaaccaataagagattgagtatta 96  Q
    |||| |||||||| | || || |||||| ||||||| |||| ||| ||| |||  |||||||||||||| |||| |||||||| |||||    
T  40715983 aaattaatgtatgactcatcactttgtgtgggttcaatttttaaaatgttgacatacaatgatttaaactaataggagattgaatatta 40715895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 28; E-Value: 0.0000006
Query Start/End: Original strand, 13 - 104
Target Start/End: Original strand, 39186028 - 39186119
Alignment:
Q  13 aatgtatgtcccaccattttgtgggggttcagttttcaaagtgtagacccacaatgatttaaaccaataagagattgagtattagagagagt 104  Q
    |||||||||| ||||| ||| || | ||||  ||| ||||||||||| |  |||||||||||| ||||||||||  | ||||| ||||||||    
T  39186028 aatgtatgtctcaccactttatgcgagttctatttccaaagtgtagatctgcaatgatttaaatcaataagagagagggtattggagagagt 39186119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 28; E-Value: 0.0000006
Query Start/End: Original strand, 45 - 76
Target Start/End: Original strand, 42340927 - 42340958
Alignment:
Q  45 ttttcaaagtgtagacccacaatgatttaaac 76  Q
    ||||||||||| ||||||||||||||||||||    
T  42340927 ttttcaaagtgcagacccacaatgatttaaac 42340958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 78; Significance: 9e-37; HSPs: 43)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 78; E-Value: 9e-37
Query Start/End: Original strand, 7 - 120
Target Start/End: Original strand, 8914829 - 8914942
Alignment:
Q  7 aaaatcaatgtatgtcccaccattttgtgggggttcagttttcaaagtgtagacccacaatgatttaaaccaataagagattgagtattagagagagtgt 106  Q
    |||| ||||||||||||||||| |||||| ||||||| |||||||||||||||||||||||||||||||||||||||||| || ||   |||||||||||    
T  8914829 aaaaccaatgtatgtcccaccactttgtgtgggttcatttttcaaagtgtagacccacaatgatttaaaccaataagagagtgggtgacagagagagtgt 8914928  T
Q  107 tgctagcattcctc 120  Q
    ||||||||||||||    
T  8914929 tgctagcattcctc 8914942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 73; E-Value: 8e-34
Query Start/End: Original strand, 7 - 107
Target Start/End: Original strand, 16983452 - 16983552
Alignment:
Q  7 aaaatcaatgtatgtcccaccattttgtgggggttcagttttcaaagtgtagacccacaatgatttaaaccaataagagattgagtattagagagagtgt 106  Q
    ||||||| | ||||||||| || |||||||||||||| |||||||||||||||| ||||||||||||||||||||||||| |||||||||||||||||||    
T  16983452 aaaatcattttatgtcccatcactttgtgggggttcaattttcaaagtgtagactcacaatgatttaaaccaataagagagtgagtattagagagagtgt 16983551  T
Q  107 t 107  Q
    |    
T  16983552 t 16983552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 73; E-Value: 8e-34
Query Start/End: Original strand, 8 - 104
Target Start/End: Complemental strand, 17499354 - 17499258
Alignment:
Q  8 aaatcaatgtatgtcccaccattttgtgggggttcagttttcaaagtgtagacccacaatgatttaaaccaataagagattgagtattagagagagt 104  Q
    |||||||| |||||||||||||||||||  |||||| ||||||||||||||| |||||||||||||||||||||||||| |||||||||||||||||    
T  17499354 aaatcaatatatgtcccaccattttgtgttggttcaattttcaaagtgtagatccacaatgatttaaaccaataagagagtgagtattagagagagt 17499258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 71; E-Value: 1e-32
Query Start/End: Original strand, 8 - 122
Target Start/End: Original strand, 32072156 - 32072270
Alignment:
Q  8 aaatcaatgtatgtcccaccattttgtgggggttcagttttcaaagtgtagacccacaatgatttaaaccaataagagattgagtattagagagagtgtt 107  Q
    |||| |||||||||||||||| |||||| ||||||| |||| |||||||||||||||||| ||||||| |||||||||| || | |||||||||||||||    
T  32072156 aaatgaatgtatgtcccaccactttgtgtgggttcaatttttaaagtgtagacccacaattatttaaatcaataagagaatgggcattagagagagtgtt 32072255  T
Q  108 gctagcattcctctt 122  Q
    ||||||||| |||||    
T  32072256 gctagcattactctt 32072270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 68; E-Value: 8e-31
Query Start/End: Original strand, 8 - 107
Target Start/End: Complemental strand, 1977294 - 1977195
Alignment:
Q  8 aaatcaatgtatgtcccaccattttgtgggggttcagttttcaaagtgtagacccacaatgatttaaaccaataagagattgagtattagagagagtgtt 107  Q
    |||||||||||||||| |||| |||||| ||||||| ||||||||||||||| |||||||||||||||||||||| ||| |||||||||||||| |||||    
T  1977294 aaatcaatgtatgtccaaccactttgtgtgggttcaattttcaaagtgtagatccacaatgatttaaaccaataaaagagtgagtattagagagtgtgtt 1977195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 64; E-Value: 2e-28
Query Start/End: Original strand, 7 - 114
Target Start/End: Original strand, 41727488 - 41727595
Alignment:
Q  7 aaaatcaatgtatgtcccaccattttgtgggggttcagttttcaaagtgtagacccacaatgatttaaaccaataagagattgagtattagagagagtgt 106  Q
    |||||||||||||||||||||  ||||||  ||||| ||||| || |||||||| || ||||||||||||||| |||||| |||||||||||||||||||    
T  41727488 aaaatcaatgtatgtcccaccgctttgtgtaggttctgtttttaatgtgtagactcataatgatttaaaccaacaagagagtgagtattagagagagtgt 41727587  T
Q  107 tgctagca 114  Q
    ||||||||    
T  41727588 tgctagca 41727595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 63; E-Value: 8e-28
Query Start/End: Original strand, 8 - 86
Target Start/End: Original strand, 8903911 - 8903989
Alignment:
Q  8 aaatcaatgtatgtcccaccattttgtgggggttcagttttcaaagtgtagacccacaatgatttaaaccaataagaga 86  Q
    ||||||||||||||||||||| ||||||  |||||| ||||||||||||||||||||||||||||||||||||||||||    
T  8903911 aaatcaatgtatgtcccaccactttgtgtcggttcaattttcaaagtgtagacccacaatgatttaaaccaataagaga 8903989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 63; E-Value: 8e-28
Query Start/End: Original strand, 8 - 122
Target Start/End: Complemental strand, 17741648 - 17741534
Alignment:
Q  8 aaatcaatgtatgtcccaccattttgtgggggttcagttttcaaagtgtagacccacaatgatttaaaccaataagagattgagtattagagagagtgtt 107  Q
    |||||||||||||||||||||||||||| | ||||| ||||||||||||||||| | |||| |||||||||||||   | ||||||||||||||||| |     
T  17741648 aaatcaatgtatgtcccaccattttgtgagagttcaattttcaaagtgtagacctataatggtttaaaccaataaagaaatgagtattagagagagtatc 17741549  T
Q  108 gctagcattcctctt 122  Q
    ||||||||| |||||    
T  17741548 gctagcattactctt 17741534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 60; E-Value: 5e-26
Query Start/End: Original strand, 8 - 107
Target Start/End: Complemental strand, 9952878 - 9952779
Alignment:
Q  8 aaatcaatgtatgtcccaccattttgtgggggttcagttttcaaagtgtagacccacaatgatttaaaccaataagagattgagtattagagagagtgtt 107  Q
    ||||||||| ||||||||||| |||||| | ||||| ||||||||||||| |||||||||||||||||||||||||| | ||||||||  ||||||||||    
T  9952878 aaatcaatgcatgtcccaccactttgtgtgagttcaattttcaaagtgtaaacccacaatgatttaaaccaataagataatgagtatttaagagagtgtt 9952779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 60; E-Value: 5e-26
Query Start/End: Original strand, 8 - 107
Target Start/End: Complemental strand, 24056046 - 24055947
Alignment:
Q  8 aaatcaatgtatgtcccaccattttgtgggggttcagttttcaaagtgtagacccacaatgatttaaaccaataagagattgagtattagagagagtgtt 107  Q
    |||| |||||||||||||||| ||||||   ||||| ||||||||||||||||||||||| |||||||||||||||||| ||||| ||||||| ||||||    
T  24056046 aaattaatgtatgtcccaccactttgtgtaagttcaattttcaaagtgtagacccacaattatttaaaccaataagagagtgagtgttagagaaagtgtt 24055947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 59; E-Value: 2e-25
Query Start/End: Original strand, 9 - 114
Target Start/End: Original strand, 43506595 - 43506698
Alignment:
Q  9 aatcaatgtatgtcccaccattttgtgggggttcagttttcaaagtgtagacccacaatgatttaaaccaataagagattgagtattagagagagtgttg 108  Q
    ||||||||||||| |||||| |||||| ||||||   |||||| |||||||||||||||||||||| ||||||||||| ||||||||  |||||||||||    
T  43506595 aatcaatgtatgttccaccactttgtgtgggttctactttcaatgtgtagacccacaatgatttaagccaataagagagtgagtatt--agagagtgttg 43506692  T
Q  109 ctagca 114  Q
    ||||||    
T  43506693 ctagca 43506698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 58; E-Value: 7e-25
Query Start/End: Original strand, 10 - 107
Target Start/End: Original strand, 5979941 - 5980037
Alignment:
Q  10 atcaatgtatgtcccaccattttgtgggggttcagttttcaaagtgtagacccacaatgatttaaaccaataagagattgagtattagagagagtgtt 107  Q
    ||||||||||||||||||| |||||| ||||||| ||||||||||||  || ||||||| ||| ||||||||||||| ||||||||||||||||||||    
T  5979941 atcaatgtatgtcccaccactttgtgtgggttcaattttcaaagtgtgaactcacaatggttt-aaccaataagagagtgagtattagagagagtgtt 5980037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 58; E-Value: 7e-25
Query Start/End: Original strand, 8 - 97
Target Start/End: Complemental strand, 28413990 - 28413901
Alignment:
Q  8 aaatcaatgtatgtcccaccattttgtgggggttcagttttcaaagtgtagacccacaatgatttaaaccaataagagattgagtattag 97  Q
    ||||||||||||||||||||| |||||| | ||||| |||||||||| |||||||| |||||||||||||||||| ||| ||||||||||    
T  28413990 aaatcaatgtatgtcccaccactttgtgtgagttcaattttcaaagtatagacccataatgatttaaaccaataaaagaatgagtattag 28413901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 56; E-Value: 1e-23
Query Start/End: Original strand, 8 - 107
Target Start/End: Complemental strand, 35151850 - 35151751
Alignment:
Q  8 aaatcaatgtatgtcccaccattttgtgggggttcagttttcaaagtgtagacccacaatgatttaaaccaataagagattgagtattagagagagtgtt 107  Q
    ||||||||||||||||||||||||||||||| |||| |||| |||||||||||||||||| ||| |||| ||||||| | ||| ||||| | ||||||||    
T  35151850 aaatcaatgtatgtcccaccattttgtggggattcaatttttaaagtgtagacccacaataattcaaactaataagaaagtgaatattaaatagagtgtt 35151751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 56; E-Value: 1e-23
Query Start/End: Original strand, 9 - 108
Target Start/End: Complemental strand, 36804959 - 36804860
Alignment:
Q  9 aatcaatgtatgtcccaccattttgtgggggttcagttttcaaagtgtagacccacaatgatttaaaccaataagagattgagtattagagagagtgttg 108  Q
    ||||||||||||||||||||||||||| ||||||| |||||||| | || | ||||||| ||||||| |||||||||| | ||||||||||||| |||||    
T  36804959 aatcaatgtatgtcccaccattttgtgtgggttcaattttcaaaatatacatccacaataatttaaatcaataagagagtaagtattagagagaatgttg 36804860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 54; E-Value: 2e-22
Query Start/End: Original strand, 7 - 107
Target Start/End: Complemental strand, 13407446 - 13407345
Alignment:
Q  7 aaaatcaatgtatgtcccaccattttgtgggggttcagttttcaaagtgta-gacccacaatgatttaaaccaataagagattgagtattagagagagtg 105  Q
    ||||||||||||||||||||||||||  | ||||||  ||||||||||||| |||||||| |||||||| ||||| ||||| ||||| ||||||||||||    
T  13407446 aaaatcaatgtatgtcccaccattttaagtgggttctattttcaaagtgtatgacccacattgatttaacccaatgagagaatgagtgttagagagagtg 13407347  T
Q  106 tt 107  Q
    ||    
T  13407346 tt 13407345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 53; E-Value: 7e-22
Query Start/End: Original strand, 17 - 121
Target Start/End: Original strand, 14236406 - 14236510
Alignment:
Q  17 tatgtcccaccattttgtgggggttcagttttcaaagtgtagacccacaatgatttaaaccaataagagattgagtattagagagagtgttgctagcatt 116  Q
    |||||||||||| ||||||   ||||| |||| ||||||||| | |||||| ||||||||||| |||||| |||||||||||||||||||||||| ||||    
T  14236406 tatgtcccaccactttgtgtaagttcaattttgaaagtgtaggcgcacaataatttaaaccaacaagagagtgagtattagagagagtgttgctaacatt 14236505  T
Q  117 cctct 121  Q
     ||||    
T  14236506 gctct 14236510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 53; E-Value: 7e-22
Query Start/End: Original strand, 7 - 122
Target Start/End: Original strand, 35797453 - 35797566
Alignment:
Q  7 aaaatcaatgtatgtcccaccattttgtgggggttcagttttcaaagtgtagacccacaatgatttaaaccaataagagattgagtattagagagagtgt 106  Q
    ||||||||||||||| |||||| |||||| | ||||| |||| |||||||| | ||||||||||||||| |||||||||  ||||||||  |||||||||    
T  35797453 aaaatcaatgtatgttccaccactttgtgcgagttcaatttttaaagtgtaaatccacaatgatttaaatcaataagag--tgagtattgtagagagtgt 35797550  T
Q  107 tgctagcattcctctt 122  Q
    || ||||||| |||||    
T  35797551 tgttagcattactctt 35797566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 51; E-Value: 1e-20
Query Start/End: Original strand, 45 - 107
Target Start/End: Complemental strand, 7493426 - 7493364
Alignment:
Q  45 ttttcaaagtgtagacccacaatgatttaaaccaataagagattgagtattagagagagtgtt 107  Q
    |||||||||||||||| ||||||||||||||||||||||||| ||||||||||| ||||||||    
T  7493426 ttttcaaagtgtagactcacaatgatttaaaccaataagagagtgagtattagaaagagtgtt 7493364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 50; E-Value: 4e-20
Query Start/End: Original strand, 10 - 107
Target Start/End: Original strand, 34952504 - 34952601
Alignment:
Q  10 atcaatgtatgtcccaccattttgtgggggttcagttttcaaagtgtagacccacaatgatttaaaccaataagagattgagtattagagagagtgtt 107  Q
    ||||||||||||||||||||||||||||  |||| |||||||  ||||||||| |||||||||||||||| |  | | | ||||||||||||||||||    
T  34952504 atcaatgtatgtcccaccattttgtgggatttcaattttcaatatgtagacccgcaatgatttaaaccaagagaaaaataagtattagagagagtgtt 34952601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 49; E-Value: 2e-19
Query Start/End: Original strand, 7 - 106
Target Start/End: Original strand, 6387619 - 6387719
Alignment:
Q  7 aaaatcaatgtatgtcccaccattttgtgggggttcagttttcaaagtgta-gacccacaatgatttaaaccaataagagattgagtattagagagagtg 105  Q
    |||||||||||||||||||||||||| || ||||||  ||| |||||| || |||||||| || ||||| ||||||||||| ||||| ||||||||||||    
T  6387619 aaaatcaatgtatgtcccaccattttatgtgggttccatttccaaagtatacgacccacattgttttaacccaataagagaatgagtgttagagagagtg 6387718  T
Q  106 t 106  Q
    |    
T  6387719 t 6387719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 48; E-Value: 7e-19
Query Start/End: Original strand, 16 - 107
Target Start/End: Complemental strand, 6098890 - 6098799
Alignment:
Q  16 gtatgtcccaccattttgtgggggttcagttttcaaagtgtagacccacaatgatttaaaccaataagagattgagtattagagagagtgtt 107  Q
    |||| |||||||| ||||||   ||||| ||||||||||||||| ||||||| ||||||| |||||||||| ||||||||||||||| ||||    
T  6098890 gtatatcccaccactttgtgcatgttcaattttcaaagtgtagatccacaataatttaaatcaataagagagtgagtattagagagaatgtt 6098799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 48; E-Value: 7e-19
Query Start/End: Original strand, 8 - 107
Target Start/End: Complemental strand, 34861308 - 34861214
Alignment:
Q  8 aaatcaatgtatgtcccaccattttgtgggggttcagttttcaaagtgtagacccacaatgatttaaaccaataagagattgagtattagagagagtgtt 107  Q
    ||||||||||||||||||||| ||||||  |||||| ||||||||||     |||||||| |||||||||||||||||| |||||||||| ||| |||||    
T  34861308 aaatcaatgtatgtcccaccactttgtgtaggttcaattttcaaagt-----cccacaataatttaaaccaataagagagtgagtattagggagggtgtt 34861214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 48; E-Value: 7e-19
Query Start/End: Original strand, 15 - 82
Target Start/End: Original strand, 35819198 - 35819265
Alignment:
Q  15 tgtatgtcccaccattttgtgggggttcagttttcaaagtgtagacccacaatgatttaaaccaataa 82  Q
    ||||||||||||||||||||| ||| ||| |||||||||| ||||||||||||||||||||| |||||    
T  35819198 tgtatgtcccaccattttgtgtgggctcaattttcaaagtatagacccacaatgatttaaactaataa 35819265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 47; E-Value: 3e-18
Query Start/End: Original strand, 13 - 107
Target Start/End: Original strand, 13214559 - 13214653
Alignment:
Q  13 aatgtatgtcccaccattttgtgggggttcagttttcaaagtgtagacccacaatgatttaaaccaataagagattgagtattagagagagtgtt 107  Q
    ||||||||||||| |||||||||  | |||| |||||||||||||||||||||||  | ||||| |||||||||  ||||||||| |||||||||    
T  13214559 aatgtatgtcccatcattttgtgtagattcaattttcaaagtgtagacccacaatattataaactaataagagagcgagtattagggagagtgtt 13214653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 40; E-Value: 0.00000000000004
Query Start/End: Original strand, 7 - 74
Target Start/End: Original strand, 9192059 - 9192126
Alignment:
Q  7 aaaatcaatgtatgtcccaccattttgtgggggttcagttttcaaagtgtagacccacaatgatttaa 74  Q
    ||||||||||||| |||||||| |||||| ||||||| |||| ||| ||||||| |||||||||||||    
T  9192059 aaaatcaatgtatatcccaccactttgtgtgggttcaatttttaaattgtagactcacaatgatttaa 9192126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 40; E-Value: 0.00000000000004
Query Start/End: Original strand, 7 - 82
Target Start/End: Complemental strand, 11962803 - 11962729
Alignment:
Q  7 aaaatcaatgtatgtcccaccattttgtgggggttcagttttcaaagtgtagacccacaatgatttaaaccaataa 82  Q
    |||||||| |||| |||||||||||| ||  |||||| ||||||||||||||| ||| ||||||||||||||||||    
T  11962803 aaaatcaaagtatatcccaccattttatgtaggttcaattttcaaagtgtagatcca-aatgatttaaaccaataa 11962729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 40; E-Value: 0.00000000000004
Query Start/End: Original strand, 8 - 75
Target Start/End: Original strand, 17716910 - 17716977
Alignment:
Q  8 aaatcaatgtatgtcccaccattttgtgggggttcagttttcaaagtgtagacccacaatgatttaaa 75  Q
    |||||||| |||||||||| ||||| || ||||| | ||||||||||||||||||||||||| |||||    
T  17716910 aaatcaatatatgtcccactattttatgtgggtttaattttcaaagtgtagacccacaatgagttaaa 17716977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 39; E-Value: 0.0000000000002
Query Start/End: Original strand, 8 - 107
Target Start/End: Original strand, 23685190 - 23685285
Alignment:
Q  8 aaatcaatgtatgtcccaccattttgtgggggttcagttttcaaagtgtagacccacaatgatttaaaccaataagagattgagtattagagagagtgtt 107  Q
    ||||||||||||||||||||| ||| || | ||||  ||| |||||||||||  | ||||||||||||||||||||    | ||||||||||||||||||    
T  23685190 aaatcaatgtatgtcccaccactttatgcgagttctatttccaaagtgtagattcgcaatgatttaaaccaataag----ttagtattagagagagtgtt 23685285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 36; E-Value: 0.00000000001
Query Start/End: Original strand, 12 - 114
Target Start/End: Original strand, 9453525 - 9453628
Alignment:
Q  12 caatgtatgtcccaccattttgtgggggttcagttttcaaagtgta-gacccacaatgatttaaaccaataagagattgagtattagagagagtgttgct 110  Q
    ||||| |||||||| || |||  | ||||||  |||||||| |||| ||||||||  ||||||| ||||| ||||| ||||||||| |||||||||||||    
T  9453525 caatgcatgtcccatcactttacgtgggttcccttttcaaaatgtatgacccacatagatttaacccaattagagagtgagtattaaagagagtgttgct 9453624  T
Q  111 agca 114  Q
    ||||    
T  9453625 agca 9453628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 35; E-Value: 0.00000000004
Query Start/End: Original strand, 45 - 107
Target Start/End: Original strand, 4675002 - 4675064
Alignment:
Q  45 ttttcaaagtgtagacccacaatgatttaaaccaataagagattgagtattagagagagtgtt 107  Q
    |||||||||||||| | ||||||||||||||||||||| | | ||| ||||||| ||||||||    
T  4675002 ttttcaaagtgtagtcacacaatgatttaaaccaataaaaaaatgaatattagaaagagtgtt 4675064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 35; E-Value: 0.00000000004
Query Start/End: Original strand, 63 - 101
Target Start/End: Complemental strand, 5095826 - 5095788
Alignment:
Q  63 acaatgatttaaaccaataagagattgagtattagagag 101  Q
    |||||||||||||||||||||||| ||||||||||||||    
T  5095826 acaatgatttaaaccaataagagagtgagtattagagag 5095788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 33; E-Value: 0.0000000006
Query Start/End: Original strand, 7 - 67
Target Start/End: Original strand, 1961340 - 1961400
Alignment:
Q  7 aaaatcaatgtatgtcccaccattttgtgggggttcagttttcaaagtgtagacccacaat 67  Q
    |||||||| ||| ||||||||| |||| | ||||||| ||||||||||||||||| |||||    
T  1961340 aaaatcaaggtacgtcccaccactttgcgtgggttcaattttcaaagtgtagaccaacaat 1961400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 33; E-Value: 0.0000000006
Query Start/End: Original strand, 8 - 100
Target Start/End: Original strand, 31301174 - 31301265
Alignment:
Q  8 aaatcaatgtatgtcccaccattttgtgggggttcagttttcaaagtgtagacccacaatgatttaaaccaataagagattgagtattagaga 100  Q
    |||||||||||||| |||||| |||||| | ||||  ||||||| |||||||  || ||| |||||||||||||||||| ||| |||| ||||    
T  31301174 aaatcaatgtatgttccaccactttgtgtgagttctattttcaatgtgtaga-tcataataatttaaaccaataagagaatgaatatttgaga 31301265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 32; E-Value: 0.000000002
Query Start/End: Original strand, 7 - 86
Target Start/End: Original strand, 45246492 - 45246571
Alignment:
Q  7 aaaatcaatgtatgtcccaccattttgtgggggttcagttttcaaagtgtagacccacaatgatttaaaccaataagaga 86  Q
    |||||||||||||||| ||||| ||| || | ||||  ||| ||||||||||| |  |||||||||||| ||||||||||    
T  45246492 aaaatcaatgtatgtctcaccactttatgcgagttctatttccaaagtgtagatctgcaatgatttaaatcaataagaga 45246571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 30; E-Value: 0.00000004
Query Start/End: Original strand, 32 - 108
Target Start/End: Original strand, 36629740 - 36629817
Alignment:
Q  32 tgtgggggttcagttttcaaagtgtagacccacaatgatttaaaccaat-aagagattgagtattagagagagtgttg 108  Q
    |||| ||||||  ||| ||| |||||||||| ||||||| ||||||||| || | | |||||||||||||||||||||    
T  36629740 tgtgtgggttctatttccaatgtgtagacccgcaatgatctaaaccaataaaaaaaatgagtattagagagagtgttg 36629817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 29; E-Value: 0.0000002
Query Start/End: Original strand, 63 - 107
Target Start/End: Original strand, 17915926 - 17915970
Alignment:
Q  63 acaatgatttaaaccaataagagattgagtattagagagagtgtt 107  Q
    |||||||||||||| ||||| | | ||||||||||||||||||||    
T  17915926 acaatgatttaaactaataataaagtgagtattagagagagtgtt 17915970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 29; E-Value: 0.0000002
Query Start/End: Original strand, 7 - 122
Target Start/End: Complemental strand, 45524998 - 45524882
Alignment:
Q  7 aaaatcaatgtatgtcccaccattttgtgggggttcagttttcaaagtgt-agacccacaatgatttaaaccaataagagattgagtattagagagagtg 105  Q
    |||||||||||||| ||||||| |||| | ||   |  ||| |||||||| | |||||| ||||||||| ||||| | | | ||||| || |||||||||    
T  45524998 aaaatcaatgtatgacccaccactttgagtggaacccatttccaaagtgtgaaacccaccatgatttaagccaattaaaaagtgagtgttggagagagtg 45524899  T
Q  106 ttgctagcattcctctt 122  Q
    ||||||||||| |||||    
T  45524898 ttgctagcatttctctt 45524882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 28; E-Value: 0.0000006
Query Start/End: Original strand, 7 - 69
Target Start/End: Original strand, 1423804 - 1423869
Alignment:
Q  7 aaaatcaatgtatgtcccaccattttgtgggggttcagttttcaaagtgtag---acccacaatga 69  Q
    ||||||||||||||||| |||| |||||  | ||||| ||||||||||||||   |||||||||||    
T  1423804 aaaatcaatgtatgtccaaccactttgtaagagttcaattttcaaagtgtagtagacccacaatga 1423869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 28; E-Value: 0.0000006
Query Start/End: Original strand, 9 - 80
Target Start/End: Complemental strand, 3099762 - 3099691
Alignment:
Q  9 aatcaatgtatgtcccaccattttgtgggggttcagttttcaaagtgtagacccacaatgatttaaaccaat 80  Q
    ||||||||||||| ||||||||||||| | |||   ||| |||||| ||| | |||||| ||||||||||||    
T  3099762 aatcaatgtatgttccaccattttgtgtgagttatatttccaaagtatagtctcacaataatttaaaccaat 3099691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 28; E-Value: 0.0000006
Query Start/End: Original strand, 39 - 82
Target Start/End: Original strand, 9193472 - 9193515
Alignment:
Q  39 gttcagttttcaaagtgtagacccacaatgatttaaaccaataa 82  Q
    ||||| ||||||||||||||||| ||||| ||| ||||||||||    
T  9193472 gttcaattttcaaagtgtagacctacaataattaaaaccaataa 9193515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 28; E-Value: 0.0000006
Query Start/End: Original strand, 65 - 104
Target Start/End: Complemental strand, 31895363 - 31895324
Alignment:
Q  65 aatgatttaaaccaataagagattgagtattagagagagt 104  Q
    |||||||||||||||||| | | |||||||||||||||||    
T  31895363 aatgatttaaaccaataaaataatgagtattagagagagt 31895324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 28; E-Value: 0.0000006
Query Start/End: Original strand, 90 - 121
Target Start/End: Original strand, 36804978 - 36805009
Alignment:
Q  90 agtattagagagagtgttgctagcattcctct 121  Q
    ||||||||||||||||||| ||||||||||||    
T  36804978 agtattagagagagtgttgttagcattcctct 36805009  T

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Target: chr4 (Bit Score: 77; Significance: 3e-36; HSPs: 51)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 77; E-Value: 3e-36
Query Start/End: Original strand, 7 - 107
Target Start/End: Original strand, 50164453 - 50164553
Alignment:
Q  7 aaaatcaatgtatgtcccaccattttgtgggggttcagttttcaaagtgtagacccacaatgatttaaaccaataagagattgagtattagagagagtgt 106  Q
    ||||||||||||| ||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||| | |||| ||||||||||||||    
T  50164453 aaaatcaatgtatctcccaccattttgtgggggttcaattttcaaagtgtagactcacaatgatttaaaccaataagaaagtgagcattagagagagtgt 50164552  T
Q  107 t 107  Q
    |    
T  50164553 t 50164553  T

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Target: chr4; HSP #2
Raw Score: 75; E-Value: 5e-35
Query Start/End: Original strand, 9 - 103
Target Start/End: Original strand, 24834638 - 24834732
Alignment:
Q  9 aatcaatgtatgtcccaccattttgtgggggttcagttttcaaagtgtagacccacaatgatttaaaccaataagagattgagtattagagagag 103  Q
    ||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||| |||||||||||||||||| ||| ||||||||||||    
T  24834638 aatcaatgtatgtcccaccattttgtgtgggttcaattttcaaagtgtagacccacaataatttaaaccaataagagagtgactattagagagag 24834732  T

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Target: chr4; HSP #3
Raw Score: 75; E-Value: 5e-35
Query Start/End: Original strand, 8 - 122
Target Start/End: Complemental strand, 33653610 - 33653496
Alignment:
Q  8 aaatcaatgtatgtcccaccattttgtgggggttcagttttcaaagtgtagacccacaatgatttaaaccaataagagattgagtattagagagagtgtt 107  Q
    ||||||||||||||||||||||||||||||| |||| |||||||| | | || |||||||||||||||||||||||| | ||||||||||||||||||||    
T  33653610 aaatcaatgtatgtcccaccattttgtggggtttcaattttcaaaatattgatccacaatgatttaaaccaataagaaagtgagtattagagagagtgtt 33653511  T
Q  108 gctagcattcctctt 122  Q
    | ||||||| |||||    
T  33653510 ggtagcattactctt 33653496  T

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Target: chr4; HSP #4
Raw Score: 72; E-Value: 3e-33
Query Start/End: Original strand, 8 - 107
Target Start/End: Original strand, 39471216 - 39471315
Alignment:
Q  8 aaatcaatgtatgtcccaccattttgtgggggttcagttttcaaagtgtagacccacaatgatttaaaccaataagagattgagtattagagagagtgtt 107  Q
    ||||||||||||||||||||| ||||||  |||||| | |||||||||||||||||||||||||||||||||||||||| ||||||||||||||| ||||    
T  39471216 aaatcaatgtatgtcccaccactttgtgttggttcaatcttcaaagtgtagacccacaatgatttaaaccaataagagagtgagtattagagagaatgtt 39471315  T

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Target: chr4; HSP #5
Raw Score: 72; E-Value: 3e-33
Query Start/End: Original strand, 8 - 107
Target Start/End: Original strand, 43771185 - 43771284
Alignment:
Q  8 aaatcaatgtatgtcccaccattttgtgggggttcagttttcaaagtgtagacccacaatgatttaaaccaataagagattgagtattagagagagtgtt 107  Q
    ||||||||||||||||||||| | |||| ||||||| |||||||||||||||||||||||||||||||||||||||||| ||||||||| |||| |||||    
T  43771185 aaatcaatgtatgtcccaccactctgtgtgggttcaattttcaaagtgtagacccacaatgatttaaaccaataagagagtgagtattaaagagggtgtt 43771284  T

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Target: chr4; HSP #6
Raw Score: 68; E-Value: 8e-31
Query Start/End: Original strand, 8 - 107
Target Start/End: Original strand, 722216 - 722315
Alignment:
Q  8 aaatcaatgtatgtcccaccattttgtgggggttcagttttcaaagtgtagacccacaatgatttaaaccaataagagattgagtattagagagagtgtt 107  Q
    ||||||| ||||||||||||| ||||||   ||||| |||| ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  722216 aaatcaaagtatgtcccaccactttgtgtaagttcaatttttaaagtgtagacccacaatgatttaaaccaataagagagtgagtattagagagagtgtt 722315  T

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Target: chr4; HSP #7
Raw Score: 68; E-Value: 8e-31
Query Start/End: Original strand, 8 - 107
Target Start/End: Original strand, 8109015 - 8109114
Alignment:
Q  8 aaatcaatgtatgtcccaccattttgtgggggttcagttttcaaagtgtagacccacaatgatttaaaccaataagagattgagtattagagagagtgtt 107  Q
    ||||||||||||||||||| | ||||||   ||||| |||||||||||||||||||||||||||||||||||||||| | ||||||||||||||||||||    
T  8109015 aaatcaatgtatgtcccactaatttgtgtttgttcaattttcaaagtgtagacccacaatgatttaaaccaataagaaagtgagtattagagagagtgtt 8109114  T

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Target: chr4; HSP #8
Raw Score: 65; E-Value: 5e-29
Query Start/End: Original strand, 11 - 107
Target Start/End: Complemental strand, 754698 - 754602
Alignment:
Q  11 tcaatgtatgtcccaccattttgtgggggttcagttttcaaagtgtagacccacaatgatttaaaccaataagagattgagtattagagagagtgtt 107  Q
    |||| ||||||||||||| ||||||   ||||| |||| ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  754698 tcaaagtatgtcccaccactttgtgtaagttcaatttttaaagtgtagacccacaatgatttaaaccaataagagagtgagtattagagagagtgtt 754602  T

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Target: chr4; HSP #9
Raw Score: 65; E-Value: 5e-29
Query Start/End: Original strand, 11 - 107
Target Start/End: Complemental strand, 26361426 - 26361330
Alignment:
Q  11 tcaatgtatgtcccaccattttgtgggggttcagttttcaaagtgtagacccacaatgatttaaaccaataagagattgagtattagagagagtgtt 107  Q
    |||||||||| |||||||||||||| ||||||| | ||||||||||||||||| ||||||||||||||||||| || |||||||||||||| |||||    
T  26361426 tcaatgtatgacccaccattttgtgtgggttcaatattcaaagtgtagacccataatgatttaaaccaataagtgagtgagtattagagagggtgtt 26361330  T

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Target: chr4; HSP #10
Raw Score: 64; E-Value: 2e-28
Query Start/End: Original strand, 9 - 108
Target Start/End: Complemental strand, 24938535 - 24938436
Alignment:
Q  9 aatcaatgtatgtcccaccattttgtgggggttcagttttcaaagtgtagacccacaatgatttaaaccaataagagattgagtattagagagagtgttg 108  Q
    ||||||||||||||||||||||||||  || |||| |||| |||||||||||| |||||||||||||||||||||||| | ||||||||||| |||||||    
T  24938535 aatcaatgtatgtcccaccattttgtttggattcaatttttaaagtgtagacctacaatgatttaaaccaataagagagtaagtattagagaaagtgttg 24938436  T

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Target: chr4; HSP #11
Raw Score: 59; E-Value: 2e-25
Query Start/End: Original strand, 7 - 93
Target Start/End: Original strand, 49077307 - 49077393
Alignment:
Q  7 aaaatcaatgtatgtcccaccattttgtgggggttcagttttcaaagtgtagacccacaatgatttaaaccaataagagattgagta 93  Q
    ||||| ||| |||||||||||| |||||| ||||||| |||| |||||||||||||||||||||||||||||||||||| |||||||    
T  49077307 aaaattaatatatgtcccaccactttgtgtgggttcaatttttaaagtgtagacccacaatgatttaaaccaataagagtttgagta 49077393  T

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Target: chr4; HSP #12
Raw Score: 56; E-Value: 1e-23
Query Start/End: Original strand, 8 - 107
Target Start/End: Original strand, 49242229 - 49242328
Alignment:
Q  8 aaatcaatgtatgtcccaccattttgtgggggttcagttttcaaagtgtagacccacaatgatttaaaccaataagagattgagtattagagagagtgtt 107  Q
    |||||||| ||||||||| || |||||| ||||||| ||||||| |||||||  ||||||||||||||||||||||||| ||||||| | ||||||||||    
T  49242229 aaatcaatatatgtcccatcactttgtgtgggttcaattttcaatgtgtagattcacaatgatttaaaccaataagagaatgagtatcatagagagtgtt 49242328  T

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Target: chr4; HSP #13
Raw Score: 54; E-Value: 2e-22
Query Start/End: Original strand, 8 - 101
Target Start/End: Complemental strand, 45311069 - 45310976
Alignment:
Q  8 aaatcaatgtatgtcccaccattttgtgggggttcagttttcaaagtgtagacccacaatgatttaaaccaataagagattgagtattagagag 101  Q
    |||||||| |||||||||||| ||||||||| |||| ||||||||||| ||||  ||||||||||||| |||||||||| | ||||||||||||    
T  45311069 aaatcaatatatgtcccaccactttgtggggattcaattttcaaagtgaagacttacaatgatttaaatcaataagagagtaagtattagagag 45310976  T

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Target: chr4; HSP #14
Raw Score: 52; E-Value: 3e-21
Query Start/End: Original strand, 8 - 107
Target Start/End: Original strand, 22542440 - 22542539
Alignment:
Q  8 aaatcaatgtatgtcccaccattttgtgggggttcagttttcaaagtgtagacccacaatgatttaaaccaataagagattgagtattagagagagtgtt 107  Q
    ||||||| |||||| |||||| |||||| ||||||| |||||||||  ||| ||||||||||||||||| ||||||||| ||||||||| | ||||||||    
T  22542440 aaatcaaagtatgttccaccactttgtgtgggttcaattttcaaagaatagtcccacaatgatttaaactaataagagagtgagtattaaaaagagtgtt 22542539  T

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Target: chr4; HSP #15
Raw Score: 51; E-Value: 1e-20
Query Start/End: Original strand, 8 - 82
Target Start/End: Complemental strand, 31251004 - 31250930
Alignment:
Q  8 aaatcaatgtatgtcccaccattttgtgggggttcagttttcaaagtgtagacccacaatgatttaaaccaataa 82  Q
    ||||||||||||||||||||||||| |||  ||||| |||||||| |||||||||||||||||||||| ||||||    
T  31251004 aaatcaatgtatgtcccaccattttatggacgttcaattttcaaaatgtagacccacaatgatttaaatcaataa 31250930  T

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Target: chr4; HSP #16
Raw Score: 51; E-Value: 1e-20
Query Start/End: Original strand, 10 - 100
Target Start/End: Complemental strand, 34129519 - 34129429
Alignment:
Q  10 atcaatgtatgtcccaccattttgtgggggttcagttttcaaagtgtagacccacaatgatttaaaccaataagagattgagtattagaga 100  Q
    |||||||||| |||||||| |||||| | ||||| |||||||||||| ||| ||||||| ||||||||||||| ||| |||||||||||||    
T  34129519 atcaatgtatatcccaccactttgtgtgtgttcaattttcaaagtgtggactcacaatggtttaaaccaataaaagagtgagtattagaga 34129429  T

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Target: chr4; HSP #17
Raw Score: 50; E-Value: 4e-20
Query Start/End: Original strand, 7 - 84
Target Start/End: Original strand, 13520007 - 13520084
Alignment:
Q  7 aaaatcaatgtatgtcccaccattttgtgggggttcagttttcaaagtgtagacccacaatgatttaaaccaataaga 84  Q
    ||||||||||||||| |||||| |||||| |||||| |||| ||| ||||| ||||||||||||||||||||||||||    
T  13520007 aaaatcaatgtatgttccaccactttgtgcgggttctgtttccaatgtgtatacccacaatgatttaaaccaataaga 13520084  T

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Target: chr4; HSP #18
Raw Score: 50; E-Value: 4e-20
Query Start/End: Original strand, 7 - 107
Target Start/End: Original strand, 20454598 - 20454696
Alignment:
Q  7 aaaatcaatgtatgtcccaccattttgtgggggttcagttttcaaagtgtagacccacaatgatttaaaccaataagagattgagtattagagagagtgt 106  Q
    |||||||||||||||||   || ||||||  |||||| ||||||||||||||| ||||||||||||||| |||||| ||| ||||| |||||||||||||    
T  20454598 aaaatcaatgtatgtcca--cactttgtgttggttcaattttcaaagtgtagatccacaatgatttaaatcaataacagagtgagtgttagagagagtgt 20454695  T

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Target: chr4; HSP #19
Raw Score: 49; E-Value: 2e-19
Query Start/End: Original strand, 7 - 107
Target Start/End: Original strand, 47009247 - 47009347
Alignment:
Q  7 aaaatcaatgtatgtcccaccattttgtgggggttcagttttcaaagtgtagacccacaatgatttaaaccaataagagattgagtattagagagagtgt 106  Q
    ||||| ||||| |||| ||||  |||||| | ||||| |||||||||||||||  ||||||||||||||||||||||| | |||||||||||||| ||||    
T  47009247 aaaattaatgtttgtctcaccgctttgtgtgagttcaattttcaaagtgtagatacacaatgatttaaaccaataagaaagtgagtattagagagggtgt 47009346  T
Q  107 t 107  Q
    |    
T  47009347 t 47009347  T

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Target: chr4; HSP #20
Raw Score: 47; E-Value: 3e-18
Query Start/End: Original strand, 8 - 82
Target Start/End: Complemental strand, 48339461 - 48339387
Alignment:
Q  8 aaatcaatgtatgtcccaccattttgtgggggttcagttttcaaagtgtagacccacaatgatttaaaccaataa 82  Q
    |||||||||||||| |||||| |||||| ||||||| ||||||||| ||||||||| |||| |||||||||||||    
T  48339461 aaatcaatgtatgttccaccactttgtgtgggttcaattttcaaagcgtagacccataatgctttaaaccaataa 48339387  T

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Target: chr4; HSP #21
Raw Score: 46; E-Value: 1e-17
Query Start/End: Original strand, 8 - 101
Target Start/End: Complemental strand, 5044661 - 5044568
Alignment:
Q  8 aaatcaatgtatgtcccaccattttgtgggggttcagttttcaaagtgtagacccacaatgatttaaaccaataagagattgagtattagagag 101  Q
    |||||||| |||||| ||| |||||||| | ||||| |||| ||| ||||||||||||| ||||||||||||||| ||| ||| ||||||||||    
T  5044661 aaatcaatatatgtcacactattttgtgtgagttcaatttttaaaatgtagacccacaacgatttaaaccaataaaagaatgaatattagagag 5044568  T

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Target: chr4; HSP #22
Raw Score: 45; E-Value: 4e-17
Query Start/End: Original strand, 51 - 107
Target Start/End: Complemental strand, 40991667 - 40991611
Alignment:
Q  51 aagtgtagacccacaatgatttaaaccaataagagattgagtattagagagagtgtt 107  Q
    |||||||||||||||||||||||||||||||| ||| ||||||| ||||||||||||    
T  40991667 aagtgtagacccacaatgatttaaaccaataaaagagtgagtatcagagagagtgtt 40991611  T

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Target: chr4; HSP #23
Raw Score: 44; E-Value: 2e-16
Query Start/End: Original strand, 8 - 114
Target Start/End: Complemental strand, 50481666 - 50481562
Alignment:
Q  8 aaatcaatgtatgtcccaccattttgtgggggttcagttttcaaagtgtagacccacaatgatttaaaccaataagagattgagtattagagagagtgtt 107  Q
    ||||||| ||||||| ||||| |||||  || |||  |||||||||||||||| |||||| |||||||||||||||||| |||    |||||||||||||    
T  50481666 aaatcaaagtatgtctcaccactttgtatggtttctattttcaaagtgtagacacacaatcatttaaaccaataagagagtga--tctagagagagtgtt 50481569  T
Q  108 gctagca 114  Q
    |||||||    
T  50481568 gctagca 50481562  T

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Target: chr4; HSP #24
Raw Score: 42; E-Value: 0.000000000000003
Query Start/End: Original strand, 9 - 86
Target Start/End: Complemental strand, 20225461 - 20225384
Alignment:
Q  9 aatcaatgtatgtcccaccattttgtgggggttcagttttcaaagtgtagacccacaatgatttaaaccaataagaga 86  Q
    |||| ||| ||||||||||| ||| || ||||||  ||| |||||||||||| |||||||||||||||||||||||||    
T  20225461 aatccatgcatgtcccaccactttttgtgggttctatttccaaagtgtagactcacaatgatttaaaccaataagaga 20225384  T

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Target: chr4; HSP #25
Raw Score: 42; E-Value: 0.000000000000003
Query Start/End: Original strand, 8 - 100
Target Start/End: Complemental strand, 25719234 - 25719141
Alignment:
Q  8 aaatcaatgtatgtcccaccattttgtgggggttcagttttcaaagtgtag-acccacaatgatttaaaccaataagagattgagtattagaga 100  Q
    ||||||||||||||||||||| ||| || |||||   ||| |||| ||||| |||||||||||||||| ||||| ||||| |||||||||||||    
T  25719234 aaatcaatgtatgtcccaccactttatgtgggtttcatttccaaaatgtaggacccacaatgatttaacccaatcagagagtgagtattagaga 25719141  T

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Target: chr4; HSP #26
Raw Score: 42; E-Value: 0.000000000000003
Query Start/End: Original strand, 8 - 73
Target Start/End: Complemental strand, 46242065 - 46242000
Alignment:
Q  8 aaatcaatgtatgtcccaccattttgtgggggttcagttttcaaagtgtagacccacaatgattta 73  Q
    |||||| |||||||||||||||||||||  |||||| |||||||| | ||||||||||||||||||    
T  46242065 aaatcattgtatgtcccaccattttgtgtaggttcaattttcaaaatatagacccacaatgattta 46242000  T

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Target: chr4; HSP #27
Raw Score: 40; E-Value: 0.00000000000004
Query Start/End: Original strand, 45 - 100
Target Start/End: Complemental strand, 37451097 - 37451042
Alignment:
Q  45 ttttcaaagtgtagacccacaatgatttaaaccaataagagattgagtattagaga 100  Q
    |||||||||||||||| | ||||||||||||||||||| ||| |||||||||||||    
T  37451097 ttttcaaagtgtagactcgcaatgatttaaaccaataaaagagtgagtattagaga 37451042  T

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Target: chr4; HSP #28
Raw Score: 40; E-Value: 0.00000000000004
Query Start/End: Original strand, 8 - 107
Target Start/End: Complemental strand, 43124635 - 43124536
Alignment:
Q  8 aaatcaatgtatgtcccaccattttgtgggggttcagttttcaaagtgtagacccacaatgatttaaaccaataagagattgagtattagagagagtgtt 107  Q
    ||||||||||||||||||||||||||||  || |   |||||||| |||| |||||  | ||||||||||||||||||| || |||||| | ||||||||    
T  43124635 aaatcaatgtatgtcccaccattttgtgtaggctttattttcaaactgtatacccatgaagatttaaaccaataagagagtgcgtattataaagagtgtt 43124536  T

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Target: chr4; HSP #29
Raw Score: 40; E-Value: 0.00000000000004
Query Start/End: Original strand, 8 - 107
Target Start/End: Original strand, 52671889 - 52671988
Alignment:
Q  8 aaatcaatgtatgtcccaccattttgtgggggttcagttttcaaagtgtagacccacaatgatttaaaccaataagagattgagtattagagagagtgtt 107  Q
    |||| |||||||||||||||||||| ||   ||||| |||| |||||||| |  | ||||||||||||| ||||||| | ||||||||| ||||||||||    
T  52671889 aaataaatgtatgtcccaccattttatgtaagttcaatttttaaagtgtaaattctcaatgatttaaactaataagatagtgagtattaaagagagtgtt 52671988  T

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Target: chr4; HSP #30
Raw Score: 39; E-Value: 0.0000000000002
Query Start/End: Original strand, 8 - 121
Target Start/End: Original strand, 16178642 - 16178756
Alignment:
Q  8 aaatcaatgtatgtcccaccattttgtgggggttcagttttcaaagtgta-gacccacaatgatttaaaccaataagagattgagtattagagagagtgt 106  Q
    ||||||||||||||||||||| ||| || ||||||  ||| ||||||||| |  | ||| |||||| | ||||||| ||| ||||  |||||||||||||    
T  16178642 aaatcaatgtatgtcccaccactttatgtgggttccatttccaaagtgtaggttctacattgatttcatccaataaaagagtgagagttagagagagtgt 16178741  T
Q  107 tgctagcattcctct 121  Q
    |||||||| ||||||    
T  16178742 tgctagcactcctct 16178756  T

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Target: chr4; HSP #31
Raw Score: 39; E-Value: 0.0000000000002
Query Start/End: Original strand, 9 - 107
Target Start/End: Complemental strand, 19937292 - 19937194
Alignment:
Q  9 aatcaatgtatgtcccaccattttgtgggggttcagttttcaaagtgtagacccacaatgatttaaaccaataagagattgagtattagagagagtgtt 107  Q
    |||||||||||||||||||||| | || | ||||  |||||||||| |||| | ||||||||| ||||||| || ||| |||| |||| ||||||||||    
T  19937292 aatcaatgtatgtcccaccattatatgtgagttctattttcaaagtatagatcgacaatgattcaaaccaacaaaagagtgagaattaaagagagtgtt 19937194  T

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Target: chr4; HSP #32
Raw Score: 39; E-Value: 0.0000000000002
Query Start/End: Original strand, 7 - 118
Target Start/End: Complemental strand, 50652458 - 50652343
Alignment:
Q  7 aaaatcaatgtatgtcccaccattttgtgggggttcagttttcaaagtgtagacccacaatgatttaaaccaataagagattgagt----attagagaga 102  Q
    ||||||||||||| || ||||| ||||||  |||||| |||||||| |||||||  ||||| ||||||| |||||||| | ||| |    ||||||||||    
T  50652458 aaaatcaatgtatatctcaccactttgtgtaggttcaattttcaaaatgtagacgtacaataatttaaatcaataagaaagtgaatattaattagagaga 50652359  T
Q  103 gtgttgctagcattcc 118  Q
    |||||||||| |||||    
T  50652358 gtgttgctagtattcc 50652343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 37; E-Value: 0.000000000003
Query Start/End: Original strand, 8 - 96
Target Start/End: Complemental strand, 10169766 - 10169678
Alignment:
Q  8 aaatcaatgtatgtcccaccattttgtgggggttcagttttcaaagtgtagacccacaatgatttaaaccaataagagattgagtatta 96  Q
    |||||||| ||||||| |||| |||||| | ||||| ||||||||   |||| ||||||| |||||||||||||||||| ||| |||||    
T  10169766 aaatcaatatatgtcctaccactttgtgtgagttcaattttcaaaacatagatccacaattatttaaaccaataagagagtgaatatta 10169678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 37; E-Value: 0.000000000003
Query Start/End: Original strand, 46 - 98
Target Start/End: Original strand, 11895134 - 11895186
Alignment:
Q  46 tttcaaagtgtagacccacaatgatttaaaccaataagagattgagtattaga 98  Q
    ||||||||||||||||||||||||||| ||| ||||||||| |||||| ||||    
T  11895134 tttcaaagtgtagacccacaatgatttgaacgaataagagagtgagtaataga 11895186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 37; E-Value: 0.000000000003
Query Start/End: Original strand, 12 - 107
Target Start/End: Original strand, 19447194 - 19447290
Alignment:
Q  12 caatgtatgtcccaccattttgtgggggttcagttttcaaagtgtag-acccacaatgatttaaaccaataagagattgagtattagagagagtgtt 107  Q
    ||||||||||||||||| ||| || ||||||  |||||||| || || ||| ||||||||||||  |||| ||||| ||||||||| ||||||||||    
T  19447194 caatgtatgtcccaccactttatgtgggttccattttcaaaatgcaggaccgacaatgatttaactcaattagagagtgagtattaaagagagtgtt 19447290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 36; E-Value: 0.00000000001
Query Start/End: Original strand, 40 - 107
Target Start/End: Complemental strand, 52279348 - 52279281
Alignment:
Q  40 ttcagttttcaaagtgtagacccacaatgatttaaaccaataagagattgagtattagagagagtgtt 107  Q
    |||| |||||||||| |||||||||||||||||| | ||||| |||| ||| ||||||| ||||||||    
T  52279348 ttcaattttcaaagtttagacccacaatgatttagatcaataggagagtgaatattagatagagtgtt 52279281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 35; E-Value: 0.00000000004
Query Start/End: Original strand, 8 - 106
Target Start/End: Original strand, 29699548 - 29699645
Alignment:
Q  8 aaatcaatgtatgtcccaccattttgtgggggttcagttttcaaagtgtagacccacaatgatttaaaccaataagagattgagtattagagagagtgt 106  Q
    ||||||||  ||||||||||| ||||||  |||||  ||| |||||| ||| || ||||||||||||| |||||||||| ||| ||||||| |||||||    
T  29699548 aaatcaatacatgtcccaccactttgtgttggttctattt-caaagtatagcccgacaatgatttaaaacaataagagagtgaatattagatagagtgt 29699645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 34; E-Value: 0.0000000002
Query Start/End: Original strand, 25 - 98
Target Start/End: Complemental strand, 45081846 - 45081773
Alignment:
Q  25 accattttgtgggggttcagttttcaaagtgtagacccacaatgatttaaaccaataagagattgagtattaga 98  Q
    ||||||||||| |||| |  ||| ||||||||| || |||||| |||||||||||||| ||| |||||||||||    
T  45081846 accattttgtgtgggtcctatttccaaagtgtacactcacaataatttaaaccaataaaagagtgagtattaga 45081773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 34; E-Value: 0.0000000002
Query Start/End: Original strand, 65 - 114
Target Start/End: Original strand, 54543454 - 54543503
Alignment:
Q  65 aatgatttaaaccaataagagattgagtattagagagagtgttgctagca 114  Q
    |||||||||||||||||| | |  ||||||||||||||||||||||||||    
T  54543454 aatgatttaaaccaataaaaaaaagagtattagagagagtgttgctagca 54543503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 32; E-Value: 0.000000002
Query Start/End: Original strand, 8 - 79
Target Start/End: Complemental strand, 33996056 - 33995985
Alignment:
Q  8 aaatcaatgtatgtcccaccattttgtgggggttcagttttcaaagtgtagacccacaatgatttaaaccaa 79  Q
    ||||||||||||||| ||||| ||| || ||||||| |||||||| | || || ||||||| ||||||||||    
T  33996056 aaatcaatgtatgtctcaccactttttgtgggttcaattttcaaaatttaaactcacaatggtttaaaccaa 33995985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 31; E-Value: 0.00000001
Query Start/End: Original strand, 53 - 107
Target Start/End: Complemental strand, 1559990 - 1559936
Alignment:
Q  53 gtgtagacccacaatgatttaaaccaataagagattgagtattagagagagtgtt 107  Q
    |||||||| || |||||||||||||||||||| ||| | |||||| |||||||||    
T  1559990 gtgtagactcaaaatgatttaaaccaataagaaattcaatattagtgagagtgtt 1559936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 31; E-Value: 0.00000001
Query Start/End: Original strand, 8 - 86
Target Start/End: Original strand, 4138924 - 4139002
Alignment:
Q  8 aaatcaatgtatgtcccaccattttgtgggggttcagttttcaaagtgtagacccacaatgatttaaaccaataagaga 86  Q
    |||||||||||||||||||||| || |  || |||  ||| |||||||||||| | |||| ||||||| ||||||||||    
T  4138924 aaatcaatgtatgtcccaccatattttatggattctatttccaaagtgtagactcgcaataatttaaatcaataagaga 4139002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 31; E-Value: 0.00000001
Query Start/End: Original strand, 58 - 104
Target Start/End: Complemental strand, 19321947 - 19321901
Alignment:
Q  58 gacccacaatgatttaaaccaataagagattgagtattagagagagt 104  Q
    ||||| |||||||| |||||||||||||| | |||||||||||||||    
T  19321947 gacccgcaatgattcaaaccaataagagagtaagtattagagagagt 19321901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 31; E-Value: 0.00000001
Query Start/End: Original strand, 49 - 107
Target Start/End: Complemental strand, 38537593 - 38537535
Alignment:
Q  49 caaagtgtagacccacaatgatttaaaccaataagagattgagtattagagagagtgtt 107  Q
    |||||||||||  || ||||||||||| |||||| ||| ||| ||||||||||||||||    
T  38537593 caaagtgtagattcataatgatttaaatcaataaaagaatgattattagagagagtgtt 38537535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 31; E-Value: 0.00000001
Query Start/End: Original strand, 7 - 101
Target Start/End: Original strand, 38636395 - 38636489
Alignment:
Q  7 aaaatcaatgtatgtcccaccattttgtgggggttcagttttcaaagtgtagacccacaatgatttaaaccaataagagattgagtattagagag 101  Q
    |||||||||||||||| ||| | ||| || ||||  | |||| |||||||||| ||||||||||||| | |||||||| | | | ||||||||||    
T  38636395 aaaatcaatgtatgtctcactactttatgtgggtctaatttttaaagtgtagatccacaatgatttatatcaataagaaaataaatattagagag 38636489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 31; E-Value: 0.00000001
Query Start/End: Original strand, 8 - 70
Target Start/End: Original strand, 50571923 - 50571985
Alignment:
Q  8 aaatcaatgtatgtcccaccattttgtgggggttcagttttcaaagtgtagacccacaatgat 70  Q
    ||||||||||||| |||| || ||| || || |||| |||||||||||||||||| |||||||    
T  50571923 aaatcaatgtatgccccatcaatttatgtggcttcaattttcaaagtgtagacccgcaatgat 50571985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 30; E-Value: 0.00000004
Query Start/End: Original strand, 40 - 81
Target Start/End: Original strand, 46287532 - 46287573
Alignment:
Q  40 ttcagttttcaaagtgtagacccacaatgatttaaaccaata 81  Q
    |||| |||||||||||| ||| ||||||||||||||||||||    
T  46287532 ttcaattttcaaagtgttgactcacaatgatttaaaccaata 46287573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 29; E-Value: 0.0000002
Query Start/End: Original strand, 8 - 107
Target Start/End: Complemental strand, 30867053 - 30866953
Alignment:
Q  8 aaatcaatgtatgtcccaccattttgtgggggttcagttttcaaagtgtaga-cccacaatgatttaaaccaataagagattgagtattagagagagtgt 106  Q
    |||| |||||||||||||||| ||| || ||||||  ||||||||||||||| |||||| || ||| | | ||||| | | |||||  ||||||||||||    
T  30867053 aaattaatgtatgtcccaccactttatgtgggttccattttcaaagtgtagatcccacattgttttcacctaataaaaaaatgagtgctagagagagtgt 30866954  T
Q  107 t 107  Q
    |    
T  30866953 t 30866953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 29; E-Value: 0.0000002
Query Start/End: Original strand, 8 - 56
Target Start/End: Complemental strand, 42862542 - 42862494
Alignment:
Q  8 aaatcaatgtatgtcccaccattttgtgggggttcagttttcaaagtgt 56  Q
    ||||||||||||||||||||| ||| || ||||||  ||||||||||||    
T  42862542 aaatcaatgtatgtcccaccactttatgtgggttccattttcaaagtgt 42862494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 29; E-Value: 0.0000002
Query Start/End: Original strand, 8 - 96
Target Start/End: Complemental strand, 46536383 - 46536295
Alignment:
Q  8 aaatcaatgtatgtcccaccattttgtgggggttcagttttcaaagtgtagacccacaatgatttaaaccaataagagattgagtatta 96  Q
    |||||||| ||||||  |||| ||||||   ||||| ||||||||||||| ||||||| |  |||||| |||||||||| ||| |||||    
T  46536383 aaatcaatatatgtcataccactttgtgtatgttcaattttcaaagtgtaaacccacactattttaaagcaataagagagtgaatatta 46536295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 28; E-Value: 0.0000006
Query Start/End: Original strand, 13 - 107
Target Start/End: Original strand, 5545642 - 5545737
Alignment:
Q  13 aatgtatgtcccaccattttgtgggggttcagttttcaaagtgta-gacccacaatgatttaaaccaataagagattgagtattagagagagtgtt 107  Q
    |||||||||||||||| ||| || ||| ||  |||||||| |||| |||||||| |||||||| | ||| | | | | ||||||||||||||||||    
T  5545642 aatgtatgtcccaccactttatgtgggctccattttcaaaatgtaagacccacattgatttaagcaaattaaaaagtaagtattagagagagtgtt 5545737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 76; Significance: 1e-35; HSPs: 27)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 76; E-Value: 1e-35
Query Start/End: Original strand, 8 - 107
Target Start/End: Original strand, 34905395 - 34905494
Alignment:
Q  8 aaatcaatgtatgtcccaccattttgtgggggttcagttttcaaagtgtagacccacaatgatttaaaccaataagagattgagtattagagagagtgtt 107  Q
    ||||||||||||||||||||| |||||  ||||||| |||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |||||    
T  34905395 aaatcaatgtatgtcccaccactttgtttgggttcaattttcaaagtgtagacccacaatgatttaaaccaataagagagtgagtattagagagggtgtt 34905494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 73; E-Value: 8e-34
Query Start/End: Original strand, 8 - 112
Target Start/End: Original strand, 445877 - 445981
Alignment:
Q  8 aaatcaatgtatgtcccaccattttgtgggggttcagttttcaaagtgtagacccacaatgatttaaaccaataagagattgagtattagagagagtgtt 107  Q
    ||||||||||||||| ||||| |||||| ||||||| |||||||||| ||||  ||||||||||||||||||||||||| ||||||||||||||||||||    
T  445877 aaatcaatgtatgtcacaccactttgtgtgggttcaattttcaaagtctagagtcacaatgatttaaaccaataagagaatgagtattagagagagtgtt 445976  T
Q  108 gctag 112  Q
    |||||    
T  445977 gctag 445981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 71; E-Value: 1e-32
Query Start/End: Original strand, 8 - 122
Target Start/End: Complemental strand, 31116245 - 31116131
Alignment:
Q  8 aaatcaatgtatgtcccaccattttgtgggggttcagttttcaaagtgtagacccacaatgatttaaaccaataagagattgagtattagagagagtgtt 107  Q
    ||||||||||||||||||| | |||||| | ||||  ||| ||| ||||| |||||||||||||||||||||||||||| ||||||||||||||||||||    
T  31116245 aaatcaatgtatgtcccactactttgtgtgtgttctatttccaatgtgtaaacccacaatgatttaaaccaataagagagtgagtattagagagagtgtt 31116146  T
Q  108 gctagcattcctctt 122  Q
    ||||||| |||||||    
T  31116145 gctagcactcctctt 31116131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 71; E-Value: 1e-32
Query Start/End: Original strand, 8 - 122
Target Start/End: Original strand, 32122854 - 32122968
Alignment:
Q  8 aaatcaatgtatgtcccaccattttgtgggggttcagttttcaaagtgtagacccacaatgatttaaaccaataagagattgagtattagagagagtgtt 107  Q
    |||||||| ||||||||||||||||||||| ||||| |||||||||||||||||||||||||||||| ||||||| | | ||| || |||||| ||||||    
T  32122854 aaatcaatatatgtcccaccattttgtgggagttcaattttcaaagtgtagacccacaatgatttaagccaataaaaaagtgaataatagagatagtgtt 32122953  T
Q  108 gctagcattcctctt 122  Q
    ||||||||| |||||    
T  32122954 gctagcattactctt 32122968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 66; E-Value: 1e-29
Query Start/End: Original strand, 8 - 97
Target Start/End: Complemental strand, 16852094 - 16852005
Alignment:
Q  8 aaatcaatgtatgtcccaccattttgtgggggttcagttttcaaagtgtagacccacaatgatttaaaccaataagagattgagtattag 97  Q
    |||| |||||||||||||||| ||||| |||||||| |||||||||||||||||||||||||||||||||||||||||| || |||||||    
T  16852094 aaataaatgtatgtcccaccactttgtaggggttcaattttcaaagtgtagacccacaatgatttaaaccaataagagagtgggtattag 16852005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 63; E-Value: 8e-28
Query Start/End: Original strand, 11 - 121
Target Start/End: Original strand, 2675957 - 2676067
Alignment:
Q  11 tcaatgtatgtcccaccattttgtgggggttcagttttcaaagtgtagacccacaatgatttaaaccaataagagattgagtattagagagagtgttgct 110  Q
    |||||||||||||||||| |||||   |||| | |||||||| ||||||||||||||| ||||||||||||| | | |||||||||||||||||||||||    
T  2675957 tcaatgtatgtcccaccactttgtttaggtttaattttcaaaatgtagacccacaatggtttaaaccaataaaaaagtgagtattagagagagtgttgct 2676056  T
Q  111 agcattcctct 121  Q
    |||||| ||||    
T  2676057 agcattactct 2676067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 61; E-Value: 1e-26
Query Start/End: Original strand, 7 - 107
Target Start/End: Original strand, 5106356 - 5106456
Alignment:
Q  7 aaaatcaatgtatgtcccaccattttgtgggggttcagttttcaaagtgtagacccacaatgatttaaaccaataagagattgagtattagagagagtgt 106  Q
    |||||||||||||||||||||| |||||| ||| ||| ||||||||||||| |||||||| ||||||||||||||| ||| ||| |||||||||| ||||    
T  5106356 aaaatcaatgtatgtcccaccactttgtgtgggatcaattttcaaagtgtacacccacaaggatttaaaccaataatagagtgaatattagagagtgtgt 5106455  T
Q  107 t 107  Q
    |    
T  5106456 t 5106456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 58; E-Value: 7e-25
Query Start/End: Original strand, 15 - 96
Target Start/End: Complemental strand, 10133272 - 10133191
Alignment:
Q  15 tgtatgtcccaccattttgtgggggttcagttttcaaagtgtagacccacaatgatttaaaccaataagagattgagtatta 96  Q
    |||||||||||||| ||| |||||||||| ||||||||||||||| |||||||||||||||||||||| ||| |||||||||    
T  10133272 tgtatgtcccaccactttatgggggttcaattttcaaagtgtagaaccacaatgatttaaaccaataaaagagtgagtatta 10133191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 56; E-Value: 1e-23
Query Start/End: Original strand, 8 - 107
Target Start/End: Complemental strand, 32112838 - 32112739
Alignment:
Q  8 aaatcaatgtatgtcccaccattttgtgggggttcagttttcaaagtgtagacccacaatgatttaaaccaataagagattgagtattagagagagtgtt 107  Q
    ||||||||| ||||| |||||||||||| |||||   ||||||||||||||| ||||||||||||||| |||||||||| ||| ||||||||||| ||||    
T  32112838 aaatcaatgcatgtcacaccattttgtgtgggttttattttcaaagtgtagatccacaatgatttaaaacaataagagagtgaatattagagagaatgtt 32112739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 55; E-Value: 5e-23
Query Start/End: Original strand, 9 - 107
Target Start/End: Complemental strand, 12780879 - 12780781
Alignment:
Q  9 aatcaatgtatgtcccaccattttgtgggggttcagttttcaaagtgtagacccacaatgatttaaaccaataagagattgagtattagagagagtgtt 107  Q
    |||||||||||||| ||| | ||||||  |||||| ||||||||||||||| ||||||||||||||||||||||| || ||| |||||||||| |||||    
T  12780879 aatcaatgtatgtctcactactttgtgttggttcaattttcaaagtgtagatccacaatgatttaaaccaataagggaatgaatattagagagggtgtt 12780781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 52; E-Value: 3e-21
Query Start/End: Original strand, 8 - 107
Target Start/End: Original strand, 21987351 - 21987450
Alignment:
Q  8 aaatcaatgtatgtcccaccattttgtgggggttcagttttcaaagtgtagacccacaatgatttaaaccaataagagattgagtattagagagagtgtt 107  Q
    |||||||||||| |||||||| ||| || | ||||  ||| ||||||||||| || ||||||||||||||||||||| | ||||||||||||||||||||    
T  21987351 aaatcaatgtatatcccaccactttatgcgagttctatttccaaagtgtagatccgcaatgatttaaaccaataagaaagtgagtattagagagagtgtt 21987450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 51; E-Value: 1e-20
Query Start/End: Original strand, 8 - 101
Target Start/End: Complemental strand, 16187551 - 16187460
Alignment:
Q  8 aaatcaatgtatgtcccaccattttgtgggggttcagttttcaaagtgtagacccacaatgatttaaaccaataagagattgagtattagagag 101  Q
    ||||||||||||  ||||||||||||||   ||||| ||||||||||||||||| ||||| ||||||||||||||| || ||||||||||||||    
T  16187551 aaatcaatgtat--cccaccattttgtgtaagttcaattttcaaagtgtagacctacaattatttaaaccaataagcgagtgagtattagagag 16187460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 51; E-Value: 1e-20
Query Start/End: Original strand, 8 - 101
Target Start/End: Complemental strand, 16187769 - 16187678
Alignment:
Q  8 aaatcaatgtatgtcccaccattttgtgggggttcagttttcaaagtgtagacccacaatgatttaaaccaataagagattgagtattagagag 101  Q
    ||||||||||||  ||||||||||||||   ||||| ||||||||||||||||| ||||| ||||||||||||||| || ||||||||||||||    
T  16187769 aaatcaatgtat--cccaccattttgtgtaagttcaattttcaaagtgtagacctacaattatttaaaccaataagcgagtgagtattagagag 16187678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 46; E-Value: 1e-17
Query Start/End: Original strand, 30 - 107
Target Start/End: Complemental strand, 8441948 - 8441871
Alignment:
Q  30 tttgtgggggttcagttttcaaagtgtagacccacaatgatttaaaccaataagagattgagtattagagagagtgtt 107  Q
    |||||||| ||||| |||||||||||||||||  |||| || ||||||||||| ||| ||||||||||||||||||||    
T  8441948 tttgtgggagttcaattttcaaagtgtagaccttcaataatctaaaccaataaaagagtgagtattagagagagtgtt 8441871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 46; E-Value: 1e-17
Query Start/End: Original strand, 30 - 107
Target Start/End: Complemental strand, 8450752 - 8450675
Alignment:
Q  30 tttgtgggggttcagttttcaaagtgtagacccacaatgatttaaaccaataagagattgagtattagagagagtgtt 107  Q
    |||||||| ||||| |||||||||||||||||  |||| || ||||||||||| ||| ||||||||||||||||||||    
T  8450752 tttgtgggagttcaattttcaaagtgtagaccttcaataatctaaaccaataaaagagtgagtattagagagagtgtt 8450675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 46; E-Value: 1e-17
Query Start/End: Original strand, 8 - 105
Target Start/End: Complemental strand, 17144792 - 17144695
Alignment:
Q  8 aaatcaatgtatgtcccaccattttgtgggggttcagttttcaaagtgtagacccacaatgatttaaaccaataagagattgagtattagagagagtg 105  Q
    |||||||| ||||| ||||| |||||||  |||| | |||||||||||||||||||||||||||||||| |||||  || | ||||||| ||||||||    
T  17144792 aaatcaatatatgttccaccgttttgtgtaggttaaattttcaaagtgtagacccacaatgatttaaactaataaaggagtaagtattaaagagagtg 17144695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 44; E-Value: 2e-16
Query Start/End: Original strand, 8 - 107
Target Start/End: Original strand, 1392687 - 1392785
Alignment:
Q  8 aaatcaatgtatgtcccaccattttgtgggggttcagttttcaaagtgtagacccacaatgatttaaaccaataagagattgagtattagagagagtgtt 107  Q
    ||||||||||||||| ||| | |||||  | ||||| |||| ||| ||||| ||||||||||||||||||||||||||| ||||||||||| || |||||    
T  1392687 aaatcaatgtatgtctcactactttgtatgtgttcaatttttaaaatgtag-cccacaatgatttaaaccaataagagagtgagtattagatagggtgtt 1392785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 43; E-Value: 7e-16
Query Start/End: Original strand, 18 - 108
Target Start/End: Complemental strand, 12753871 - 12753781
Alignment:
Q  18 atgtcccaccattttgtgggggttcagttttcaaagtgtagacccacaatgatttaaaccaataagagattgagtattagagagagtgttg 108  Q
    ||||||||||| |||||| ||||||  ||||||  ||||| || ||||||||||||||| ||||| |||  ||||||||||||||||||||    
T  12753871 atgtcccaccactttgtgtgggttctattttcagggtgtacactcacaatgatttaaactaataaaagagcgagtattagagagagtgttg 12753781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 40; E-Value: 0.00000000000004
Query Start/End: Original strand, 8 - 107
Target Start/End: Original strand, 16436124 - 16436222
Alignment:
Q  8 aaatcaatgtatgtcccaccattttgtgggggttcagttttcaaagtgtagacccacaatgatttaaaccaataagagattgagtattagagagagtgtt 107  Q
    ||||||||||||| |||||||||||||| ||||||  |||  |||||||||||||| || |||||||||||||||  || ||| ||||| | ||||||||    
T  16436124 aaatcaatgtatg-cccaccattttgtgtgggttctatttctaaagtgtagacccaaaaagatttaaaccaataatcgactgaatattaaaaagagtgtt 16436222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 38; E-Value: 0.0000000000006
Query Start/End: Original strand, 14 - 107
Target Start/End: Complemental strand, 32599063 - 32598970
Alignment:
Q  14 atgtatgtcccaccattttgtgggggttcagttttcaaagtgtagacccacaatgatttaaaccaataagagattgagtattagagagagtgtt 107  Q
    ||||||||||| ||| |||||| |||| |  ||| |||||||||||  |||||||||||||| |||||| ||| ||||||||| ||||| ||||    
T  32599063 atgtatgtcccgccactttgtgtgggtgctatttccaaagtgtagattcacaatgatttaaatcaataaaagagtgagtattaaagagaatgtt 32598970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 37; E-Value: 0.000000000003
Query Start/End: Original strand, 61 - 122
Target Start/End: Complemental strand, 34882298 - 34882235
Alignment:
Q  61 ccacaatgatttaaaccaataagagattgagtatt--agagagagtgttgctagcattcctctt 122  Q
    |||||||||||||||||||||||||| ||||| ||  | ||||||||||||||||||| |||||    
T  34882298 ccacaatgatttaaaccaataagagagtgagtgttgaaaagagagtgttgctagcatttctctt 34882235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 36; E-Value: 0.00000000001
Query Start/End: Original strand, 39 - 86
Target Start/End: Complemental strand, 12785029 - 12784982
Alignment:
Q  39 gttcagttttcaaagtgtagacccacaatgatttaaaccaataagaga 86  Q
    ||||| ||||||||||||||| ||| ||||||||||||||||||||||    
T  12785029 gttcaattttcaaagtgtagatccataatgatttaaaccaataagaga 12784982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 32; E-Value: 0.000000002
Query Start/End: Original strand, 8 - 75
Target Start/End: Original strand, 31444018 - 31444085
Alignment:
Q  8 aaatcaatgtatgtcccaccattttgtgggggttcagttttcaaagtgtagacccacaatgatttaaa 75  Q
    |||| ||| ||||| |||||||||||||  |||||| |||||||||||| ||| ||||| ||||||||    
T  31444018 aaattaatttatgttccaccattttgtgtcggttcaattttcaaagtgttgactcacaaggatttaaa 31444085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 32; E-Value: 0.000000002
Query Start/End: Original strand, 7 - 58
Target Start/End: Complemental strand, 35128845 - 35128794
Alignment:
Q  7 aaaatcaatgtatgtcccaccattttgtgggggttcagttttcaaagtgtag 58  Q
    |||||||||||||||||||||| ||| || ||||||  ||||||||||||||    
T  35128845 aaaatcaatgtatgtcccaccactttatgtgggttccattttcaaagtgtag 35128794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 31; E-Value: 0.00000001
Query Start/End: Original strand, 8 - 82
Target Start/End: Original strand, 899952 - 900026
Alignment:
Q  8 aaatcaatgtatgtcccaccattttgtgggggttcagttttcaaagtgtagacccacaatgatttaaaccaataa 82  Q
    |||||||  ||||| |||| |||||  ||||||||| |||||| | | |||||||||||||| ||||||||||||    
T  899952 aaatcaacatatgttccactattttacgggggttcaattttcataatatagacccacaatgaattaaaccaataa 900026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 31; E-Value: 0.00000001
Query Start/End: Original strand, 8 - 105
Target Start/End: Complemental strand, 19090336 - 19090238
Alignment:
Q  8 aaatcaatgtatgtcccaccattttgtgggggttcagttttcaaagtgta-gacccacaatgatttaaaccaataagagattgagtattagagagagtg 105  Q
    ||||||||||||||||||||| ||| || ||||||  ||| ||||||||| | || ||| ||| || ||||||||| ||| |||||  |||||||||||    
T  19090336 aaatcaatgtatgtcccaccactttatgtgggttccatttccaaagtgtaggtcctacattgaattcaaccaataaaagagtgagtgctagagagagtg 19090238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 29; E-Value: 0.0000002
Query Start/End: Original strand, 8 - 48
Target Start/End: Original strand, 2931620 - 2931660
Alignment:
Q  8 aaatcaatgtatgtcccaccattttgtgggggttcagtttt 48  Q
    |||||||||||||||| |||||||||||| |||||| ||||    
T  2931620 aaatcaatgtatgtcctaccattttgtggtggttcaatttt 2931660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 75; Significance: 5e-35; HSPs: 47)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 75; E-Value: 5e-35
Query Start/End: Original strand, 7 - 105
Target Start/End: Original strand, 27888340 - 27888438
Alignment:
Q  7 aaaatcaatgtatgtcccaccattttgtgggggttcagttttcaaagtgtagacccacaatgatttaaaccaataagagattgagtattagagagagtg 105  Q
    |||||||||||||||||||||| |||||| ||||||| |||| ||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||    
T  27888340 aaaatcaatgtatgtcccaccactttgtgtgggttcaatttttaaagtgtagacccacaatgatttaaaccaataagagagtgagtgttagagagagtg 27888438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 75; E-Value: 5e-35
Query Start/End: Original strand, 7 - 101
Target Start/End: Original strand, 46517349 - 46517443
Alignment:
Q  7 aaaatcaatgtatgtcccaccattttgtgggggttcagttttcaaagtgtagacccacaatgatttaaaccaataagagattgagtattagagag 101  Q
    ||||||||||||| |||||||||| |||||||||||| |||||||||||||||| ||||||||||||||||||||||||| ||||||||||||||    
T  46517349 aaaatcaatgtatatcccaccattctgtgggggttcaattttcaaagtgtagactcacaatgatttaaaccaataagagaatgagtattagagag 46517443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 72; E-Value: 3e-33
Query Start/End: Original strand, 8 - 107
Target Start/End: Original strand, 6442224 - 6442323
Alignment:
Q  8 aaatcaatgtatgtcccaccattttgtgggggttcagttttcaaagtgtagacccacaatgatttaaaccaataagagattgagtattagagagagtgtt 107  Q
    |||||||||||||| |||||||||||||||| |||| |||||||||||||||||||||||||||||||||||||| ||| ||||||||| ||| ||||||    
T  6442224 aaatcaatgtatgttccaccattttgtggggattcaattttcaaagtgtagacccacaatgatttaaaccaataaaagagtgagtattaaagatagtgtt 6442323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 72; E-Value: 3e-33
Query Start/End: Original strand, 9 - 116
Target Start/End: Complemental strand, 12263556 - 12263449
Alignment:
Q  9 aatcaatgtatgtcccaccattttgtgggggttcagttttcaaagtgtagacccacaatgatttaaaccaataagagattgagtattagagagagtgttg 108  Q
    ||||||||||||||||| || ||||||  || ||| |||||||||||||||||||||||||||||||||||||||| | |||||||||||||||||||||    
T  12263556 aatcaatgtatgtcccatcactttgtgtaggatcaattttcaaagtgtagacccacaatgatttaaaccaataagatagtgagtattagagagagtgttg 12263457  T
Q  109 ctagcatt 116  Q
     |||||||    
T  12263456 ttagcatt 12263449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 64; E-Value: 2e-28
Query Start/End: Original strand, 8 - 107
Target Start/End: Original strand, 22189998 - 22190097
Alignment:
Q  8 aaatcaatgtatgtcccaccattttgtgggggttcagttttcaaagtgtagacccacaatgatttaaaccaataagagattgagtattagagagagtgtt 107  Q
    ||||||||||||| ||||||| |||||| ||||||| |||||||||||||||||| |||||||||||||||||||  || |||||||||||||| |||||    
T  22189998 aaatcaatgtatggcccaccactttgtgtgggttcaattttcaaagtgtagacccgcaatgatttaaaccaataaacgagtgagtattagagagggtgtt 22190097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 64; E-Value: 2e-28
Query Start/End: Original strand, 8 - 107
Target Start/End: Original strand, 27949332 - 27949431
Alignment:
Q  8 aaatcaatgtatgtcccaccattttgtgggggttcagttttcaaagtgtagacccacaatgatttaaaccaataagagattgagtattagagagagtgtt 107  Q
    |||||||  ||||||| ||||||||||| | |||||  ||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||||    
T  27949332 aaatcaagttatgtcctaccattttgtgtgagttcaaatttcaaagtgtagacccacaatgatttaaactaataagagagtgagtattagagagagtgtt 27949431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 62; E-Value: 3e-27
Query Start/End: Original strand, 8 - 101
Target Start/End: Original strand, 11824130 - 11824223
Alignment:
Q  8 aaatcaatgtatgtcccaccattttgtgggggttcagttttcaaagtgtagacccacaatgatttaaaccaataagagattgagtattagagag 101  Q
    ||||||||||||||||||||||||||||  | |||| ||||||||||||| ||||||||||||||||| |||||||| | ||||||||||||||    
T  11824130 aaatcaatgtatgtcccaccattttgtgtagcttcaattttcaaagtgtaaacccacaatgatttaaatcaataagaaagtgagtattagagag 11824223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 62; E-Value: 3e-27
Query Start/End: Original strand, 8 - 116
Target Start/End: Complemental strand, 31502585 - 31502479
Alignment:
Q  8 aaatcaatgtatgtcccaccattttgtgggggttcagttttcaaagtgtagacccacaatgatttaaaccaataagagattgagtattagagagagtgtt 107  Q
    ||||||| |||||||||||||||||||| | ||||| |||||||||||||||| |||||||||||||||||||||||||  | || | | ||||||||||    
T  31502585 aaatcaaggtatgtcccaccattttgtgtgcgttcaattttcaaagtgtagactcacaatgatttaaaccaataagaga--gtgtttaaaagagagtgtt 31502488  T
Q  108 gctagcatt 116  Q
    |||||||||    
T  31502487 gctagcatt 31502479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 56; E-Value: 1e-23
Query Start/End: Original strand, 8 - 107
Target Start/End: Complemental strand, 25686956 - 25686857
Alignment:
Q  8 aaatcaatgtatgtcccaccattttgtgggggttcagttttcaaagtgtagacccacaatgatttaaaccaataagagattgagtattagagagagtgtt 107  Q
    |||||||||||||||  |||| ||| |  ||||||| |||||||||||||||||||||||||||||||||||||||| | ||||||||||| ||| ||||    
T  25686956 aaatcaatgtatgtcataccactttttatgggttcaattttcaaagtgtagacccacaatgatttaaaccaataagataatgagtattagaaagaatgtt 25686857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 54; E-Value: 2e-22
Query Start/End: Original strand, 8 - 101
Target Start/End: Original strand, 32205135 - 32205228
Alignment:
Q  8 aaatcaatgtatgtcccaccattttgtgggggttcagttttcaaagtgtagacccacaatgatttaaaccaataagagattgagtattagagag 101  Q
    |||||||||||||||| ||||||||||| ||||||| |||| ||||| |||  | |||||||||||||| ||||||||| ||||||||||||||    
T  32205135 aaatcaatgtatgtcctaccattttgtgtgggttcaatttttaaagtataggtctacaatgatttaaactaataagagagtgagtattagagag 32205228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 53; E-Value: 7e-22
Query Start/End: Original strand, 11 - 107
Target Start/End: Complemental strand, 6580120 - 6580024
Alignment:
Q  11 tcaatgtatgtcccaccattttgtgggggttcagttttcaaagtgtagacccacaatgatttaaaccaataagagattgagtattagagagagtgtt 107  Q
    |||||||||||| ||| | ||||||  |||||| |||||||| | | |||||||||| |||||||||||||||||| ||||||||||||||||||||    
T  6580120 tcaatgtatgtctcactactttgtgtaggttcaattttcaaaatatggacccacaataatttaaaccaataagagagtgagtattagagagagtgtt 6580024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 52; E-Value: 3e-21
Query Start/End: Original strand, 8 - 107
Target Start/End: Original strand, 7775059 - 7775157
Alignment:
Q  8 aaatcaatgtatgtcccaccattttgtgggggttcagttttcaaagtgtagacccacaatgatttaaaccaataagagattgagtattagagagagtgtt 107  Q
    ||||||||||||||||||||| |||||| | ||||| |||||||||||| || ||| |||||||||||| |||||| || ||| ||||||||||||||||    
T  7775059 aaatcaatgtatgtcccaccactttgtgtgagttcaattttcaaagtgtgga-ccagaatgatttaaacaaataagtgagtgaatattagagagagtgtt 7775157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 52; E-Value: 3e-21
Query Start/End: Original strand, 8 - 107
Target Start/End: Original strand, 11692238 - 11692337
Alignment:
Q  8 aaatcaatgtatgtcccaccattttgtgggggttcagttttcaaagtgtagacccacaatgatttaaaccaataagagattgagtattagagagagtgtt 107  Q
    |||||||||||||||| |||| ||||||  |||||| ||||||||||||| || |||| |||||||||| |||| |||| |||||||||||||| |||||    
T  11692238 aaatcaatgtatgtcctaccactttgtgtaggttcaattttcaaagtgtaaactcacagtgatttaaactaatatgagagtgagtattagagagtgtgtt 11692337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 52; E-Value: 3e-21
Query Start/End: Original strand, 8 - 107
Target Start/End: Original strand, 14795190 - 14795289
Alignment:
Q  8 aaatcaatgtatgtcccaccattttgtgggggttcagttttcaaagtgtagacccacaatgatttaaaccaataagagattgagtattagagagagtgtt 107  Q
    ||||||||||||||||||||| ||| ||  |||||| |||| |||||||| | ||| |||||||||||| ||||||||| ||||||| ||||||||||||    
T  14795190 aaatcaatgtatgtcccaccaatttttgttggttcaatttttaaagtgtatatccataatgatttaaactaataagagagtgagtataagagagagtgtt 14795289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 52; E-Value: 3e-21
Query Start/End: Original strand, 8 - 107
Target Start/End: Original strand, 15242182 - 15242281
Alignment:
Q  8 aaatcaatgtatgtcccaccattttgtgggggttcagttttcaaagtgtagacccacaatgatttaaaccaataagagattgagtattagagagagtgtt 107  Q
    ||||||||||||||||||||| ||| ||  |||||| |||| |||||||| | ||| |||||||||||| ||||||||| ||||||| ||||||||||||    
T  15242182 aaatcaatgtatgtcccaccaatttttgttggttcaatttttaaagtgtatatccataatgatttaaactaataagagagtgagtataagagagagtgtt 15242281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 50; E-Value: 4e-20
Query Start/End: Original strand, 7 - 84
Target Start/End: Original strand, 9648982 - 9649059
Alignment:
Q  7 aaaatcaatgtatgtcccaccattttgtgggggttcagttttcaaagtgtagacccacaatgatttaaaccaataaga 84  Q
    ||||||||||||||| |||||| |||||| |||||| |||| ||| ||||| ||||||||||||||||||||||||||    
T  9648982 aaaatcaatgtatgttccaccactttgtgcgggttctgtttccaatgtgtatacccacaatgatttaaaccaataaga 9649059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 49; E-Value: 2e-19
Query Start/End: Original strand, 50 - 122
Target Start/End: Original strand, 31874117 - 31874189
Alignment:
Q  50 aaagtgtagacccacaatgatttaaaccaataagagattgagtattagagagagtgttgctagcattcctctt 122  Q
    ||||||||||| |||||||||||||||| |||||||| |||||||| ||||||||||| |||||||| |||||    
T  31874117 aaagtgtagactcacaatgatttaaacctataagagagtgagtattcgagagagtgttactagcattactctt 31874189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 49; E-Value: 2e-19
Query Start/End: Original strand, 8 - 96
Target Start/End: Original strand, 33008163 - 33008251
Alignment:
Q  8 aaatcaatgtatgtcccaccattttgtgggggttcagttttcaaagtgtagacccacaatgatttaaaccaataagagattgagtatta 96  Q
    |||||| |||||||||||||| |||||| ||||||  ||| ||| |||||||||||||||||||||||||||||| |||  ||||||||    
T  33008163 aaatcattgtatgtcccaccactttgtgtgggttctatttccaatgtgtagacccacaatgatttaaaccaataaaagagagagtatta 33008251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 45; E-Value: 4e-17
Query Start/End: Original strand, 16 - 104
Target Start/End: Original strand, 27320441 - 27320529
Alignment:
Q  16 gtatgtcccaccattttgtgggggttcagttttcaaagtgtagacccacaatgatttaaaccaataagagattgagtattagagagagt 104  Q
    |||| |||||||||||||||  |||||| |||| |||||||||||||||||| |||||||  ||||||| | |||||| ||||||||||    
T  27320441 gtatatcccaccattttgtgtaggttcaatttttaaagtgtagacccacaattatttaaatgaataagaaagtgagtagtagagagagt 27320529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 45; E-Value: 4e-17
Query Start/End: Original strand, 24 - 84
Target Start/End: Complemental strand, 36845627 - 36845567
Alignment:
Q  24 caccattttgtgggggttcagttttcaaagtgtagacccacaatgatttaaaccaataaga 84  Q
    ||||| |||||| ||||||| |||||||||| |||||||||||||||||||||||||||||    
T  36845627 caccaatttgtgtgggttcaattttcaaagtatagacccacaatgatttaaaccaataaga 36845567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 45; E-Value: 4e-17
Query Start/End: Original strand, 7 - 107
Target Start/End: Original strand, 39254141 - 39254241
Alignment:
Q  7 aaaatcaatgtatgtcccaccattttgtgggggttcagttttcaaagtgtagacccacaatgatttaaaccaataagagattgagtattagagagagtgt 106  Q
    ||||| |||||||||  ||||| ||||||  |||||| |||| ||| |||||||||||||| ||||||| |||||||||| ||||| ||| |||||||||    
T  39254141 aaaattaatgtatgtttcaccactttgtgttggttcaatttttaaaatgtagacccacaataatttaaatcaataagagagtgagtgttaaagagagtgt 39254240  T
Q  107 t 107  Q
    |    
T  39254241 t 39254241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 45; E-Value: 4e-17
Query Start/End: Original strand, 8 - 100
Target Start/End: Complemental strand, 44350923 - 44350831
Alignment:
Q  8 aaatcaatgtatgtcccaccattttgtgggggttcagttttcaaagtgtagacccacaatgatttaaaccaataagagattgagtattagaga 100  Q
    ||||||||||||||| |  || |||||   |||||| |||||||||||||||| |||||||||||||||||| || ||| |||||||||||||    
T  44350923 aaatcaatgtatgtctcgtcactttgtttaggttcaattttcaaagtgtagactcacaatgatttaaaccaacaaaagagtgagtattagaga 44350831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 42; E-Value: 0.000000000000003
Query Start/End: Original strand, 57 - 122
Target Start/End: Original strand, 12167315 - 12167380
Alignment:
Q  57 agacccacaatgatttaaaccaataagagattgagtattagagagagtgttgctagcattcctctt 122  Q
    |||||||||||||||||||||||||||| | ||||||||| ||||||||||| || |||| |||||    
T  12167315 agacccacaatgatttaaaccaataagaaagtgagtattaaagagagtgttgttaacattactctt 12167380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 42; E-Value: 0.000000000000003
Query Start/End: Original strand, 18 - 107
Target Start/End: Complemental strand, 48374550 - 48374461
Alignment:
Q  18 atgtcccaccattttgtgggggttcagttttcaaagtgtagacccacaatgatttaaaccaataagagattgagtattagagagagtgtt 107  Q
    ||||||||||| ||| |  ||||||  ||| ||||||||| || |||||| ||||||||||| |||||| ||||||||||||||||||||    
T  48374550 atgtcccaccactttctatgggttctatttccaaagtgtatactcacaataatttaaaccaacaagagagtgagtattagagagagtgtt 48374461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 41; E-Value: 0.00000000000001
Query Start/End: Original strand, 8 - 96
Target Start/End: Complemental strand, 32212990 - 32212903
Alignment:
Q  8 aaatcaatgtatgtcccaccattttgtgggggttcagttttcaaagtgtagacccacaatgatttaaaccaataagagattgagtatta 96  Q
    ||||||||||||||| ||| | |||||  | ||||| |||| ||| ||||| ||||||||||||||||||||||||||| |||||||||    
T  32212990 aaatcaatgtatgtctcactactttgtatgtgttcaatttttaaaatgtag-cccacaatgatttaaaccaataagagagtgagtatta 32212903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 39; E-Value: 0.0000000000002
Query Start/End: Original strand, 45 - 107
Target Start/End: Complemental strand, 19422918 - 19422856
Alignment:
Q  45 ttttcaaagtgtagacccacaatgatttaaaccaataagagattgagtattagagagagtgtt 107  Q
    ||||| ||||||||| |||||||||||||||||||||| ||| ||||||| ||||| ||||||    
T  19422918 ttttcgaagtgtagatccacaatgatttaaaccaataaaagagtgagtatcagagatagtgtt 19422856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 38; E-Value: 0.0000000000006
Query Start/End: Original strand, 7 - 104
Target Start/End: Original strand, 7459401 - 7459498
Alignment:
Q  7 aaaatcaatgtatgtcccaccattttgtgggggttcagttttcaaagtgtagacccacaatgatttaaaccaataagagattgagtattagagagagt 104  Q
    ||||||||||||| | |||||| ||| || | | ||| |||||||| | |||| ||||||| |||||||||||||| ||| ||||||||| |||||||    
T  7459401 aaaatcaatgtatattccaccactttatgtgagctcaattttcaaaatatagatccacaataatttaaaccaataaaagagtgagtattaaagagagt 7459498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 38; E-Value: 0.0000000000006
Query Start/End: Original strand, 7 - 96
Target Start/End: Complemental strand, 10934087 - 10933998
Alignment:
Q  7 aaaatcaatgtatgtcccaccattttgtgggggttcagttttcaaagtgtagacccacaatgatttaaaccaataagagattgagtatta 96  Q
    ||||| ||| |||||| ||||| |||||  || |||  ||| |||||| || |||||||||||||||||| |||||||||||||||||||    
T  10934087 aaaattaatatatgtctcaccactttgtatggtttctatttccaaagtataaacccacaatgatttaaactaataagagattgagtatta 10933998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 36; E-Value: 0.00000000001
Query Start/End: Original strand, 48 - 107
Target Start/End: Original strand, 7774944 - 7775002
Alignment:
Q  48 tcaaagtgtagacccacaatgatttaaaccaataagagattgagtattagagagagtgtt 107  Q
    ||||||||| |||| |||||||||||||||||||||||| | | ||||||||||||||||    
T  7774944 tcaaagtgtggacc-acaatgatttaaaccaataagagagtaaatattagagagagtgtt 7775002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 36; E-Value: 0.00000000001
Query Start/End: Original strand, 40 - 107
Target Start/End: Complemental strand, 32178893 - 32178826
Alignment:
Q  40 ttcagttttcaaagtgtagacccacaatgatttaaaccaataagagattgagtattagagagagtgtt 107  Q
    |||| ||||||||||||| || |||||||||||||| |||||||||| ||| ||| ||||||| ||||    
T  32178893 ttcaattttcaaagtgtatacacacaatgatttaaatcaataagagagtgattatcagagagattgtt 32178826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 35; E-Value: 0.00000000004
Query Start/End: Original strand, 54 - 104
Target Start/End: Complemental strand, 36845566 - 36845516
Alignment:
Q  54 tgtagacccacaatgatttaaaccaataagagattgagtattagagagagt 104  Q
    ||||||||||||||||||||||||||||||||| ||| ||||  |||||||    
T  36845566 tgtagacccacaatgatttaaaccaataagagagtgaatattctagagagt 36845516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 34; E-Value: 0.0000000002
Query Start/End: Original strand, 9 - 82
Target Start/End: Complemental strand, 25092781 - 25092708
Alignment:
Q  9 aatcaatgtatgtcccaccattttgtgggggttcagttttcaaagtgtagacccacaatgatttaaaccaataa 82  Q
    ||||||||||||||| || | |||||| | ||||| ||||| |||| ||||| |||||| ||||||||||||||    
T  25092781 aatcaatgtatgtcctactactttgtgtgagttcaattttctaagtatagacacacaataatttaaaccaataa 25092708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 33; E-Value: 0.0000000006
Query Start/End: Original strand, 7 - 106
Target Start/End: Complemental strand, 24539245 - 24539145
Alignment:
Q  7 aaaatcaatgtatgtcccaccattttgtgggggttcagttttcaaagtgta-gacccacaatgatttaaaccaataagagattgagtattagagagagtg 105  Q
    ||||||||| |||||||||||| ||| |  || |||  ||| |||| |||| |||||||| |||||||| ||||| ||||| ||||| ||||||||||||    
T  24539245 aaaatcaatatatgtcccaccactttatatggattccatttccaaaatgtatgacccacattgatttaacccaatgagagagtgagtgttagagagagtg 24539146  T
Q  106 t 106  Q
    |    
T  24539145 t 24539145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 32; E-Value: 0.000000002
Query Start/End: Original strand, 27 - 82
Target Start/End: Complemental strand, 3855912 - 3855857
Alignment:
Q  27 cattttgtgggggttcagttttcaaagtgtagacccacaatgatttaaaccaataa 82  Q
    |||||| || ||||||| ||||||||||  ||||| ||||||||||||||||||||    
T  3855912 cattttatgtgggttcaattttcaaagttcagacctacaatgatttaaaccaataa 3855857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 32; E-Value: 0.000000002
Query Start/End: Original strand, 8 - 59
Target Start/End: Complemental strand, 19494460 - 19494409
Alignment:
Q  8 aaatcaatgtatgtcccaccattttgtgggggttcagttttcaaagtgtaga 59  Q
    ||||||||||||||||||||| ||| || ||||||  |||||||||||||||    
T  19494460 aaatcaatgtatgtcccaccactttatgtgggttccattttcaaagtgtaga 19494409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 32; E-Value: 0.000000002
Query Start/End: Original strand, 7 - 111
Target Start/End: Complemental strand, 23564157 - 23564049
Alignment:
Q  7 aaaatcaatgtatgtcccaccattttgtgggggttcagttttcaaagtgtagacccacaatgatttaaaccaataagag----attgagtattagagaga 102  Q
    ||||| |||||||||| ||||| |||||  | ||||  ||||||||||||||| ||||  | |||||||||||||| ||    | ||||||| |||||||    
T  23564157 aaaattaatgtatgtcgcaccactttgtatgagttctattttcaaagtgtagatccactgtaatttaaaccaataaaagagtaagtgagtataagagaga 23564058  T
Q  103 gtgttgcta 111  Q
    |||||||||    
T  23564057 gtgttgcta 23564049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 32; E-Value: 0.000000002
Query Start/End: Original strand, 57 - 108
Target Start/End: Complemental strand, 38065398 - 38065347
Alignment:
Q  57 agacccacaatgatttaaaccaataagagattgagtattagagagagtgttg 108  Q
    ||||||||  |||||||||||||||||| | |||||||| ||||||||||||    
T  38065398 agacccaccttgatttaaaccaataagaaagtgagtatttgagagagtgttg 38065347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 31; E-Value: 0.00000001
Query Start/End: Original strand, 8 - 58
Target Start/End: Original strand, 13919839 - 13919889
Alignment:
Q  8 aaatcaatgtatgtcccaccattttgtgggggttcagttttcaaagtgtag 58  Q
    ||||||||||||||||||||| ||| || ||||||  ||||||||||||||    
T  13919839 aaatcaatgtatgtcccaccactttatgtgggttccattttcaaagtgtag 13919889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 30; E-Value: 0.00000004
Query Start/End: Original strand, 63 - 100
Target Start/End: Original strand, 1316387 - 1316424
Alignment:
Q  63 acaatgatttaaaccaataagagattgagtattagaga 100  Q
    |||||||||||||||||||| ||| |||||||||||||    
T  1316387 acaatgatttaaaccaataaaagagtgagtattagaga 1316424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 30; E-Value: 0.00000004
Query Start/End: Original strand, 54 - 107
Target Start/End: Complemental strand, 30742615 - 30742562
Alignment:
Q  54 tgtagacccacaatgatttaaaccaataagagattgagtattagagagagtgtt 107  Q
    |||||||| ||||||||||||| |||||||| | ||| |||||||| |||||||    
T  30742615 tgtagacctacaatgatttaaatcaataagaaaatgaatattagagtgagtgtt 30742562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 30; E-Value: 0.00000004
Query Start/End: Original strand, 50 - 107
Target Start/End: Original strand, 31628100 - 31628157
Alignment:
Q  50 aaagtgtagacccacaatgatttaaaccaataagagattgagtattagagagagtgtt 107  Q
    ||||||| |||| || ||||||||||||||||||||| | ||||||| ||| ||||||    
T  31628100 aaagtgttgacctacgatgatttaaaccaataagagagtaagtattaaagatagtgtt 31628157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 30; E-Value: 0.00000004
Query Start/End: Original strand, 8 - 85
Target Start/End: Original strand, 32605390 - 32605467
Alignment:
Q  8 aaatcaatgtatgtcccaccattttgtgggggttcagttttcaaagtgtagacccacaatgatttaaaccaataagag 85  Q
    ||||||||||||||| ||  | |||||| || |||| |||| ||||||||| | ||||||||||||||  ||||||||    
T  32605390 aaatcaatgtatgtctcattactttgtgtggattcaatttttaaagtgtaggctcacaatgatttaaattaataagag 32605467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 30; E-Value: 0.00000004
Query Start/End: Original strand, 8 - 104
Target Start/End: Original strand, 45909515 - 45909612
Alignment:
Q  8 aaatcaatgtatgtcccaccattttgtgggggttcagttttcaaagtgta-gacccacaatgatttaaaccaataagagattgagtattagagagagt 104  Q
    ||||||||||||||||||||| ||| || ||||||  ||| |||| |||| | || ||| |||||| | ||||||| ||| ||||| |||||||||||    
T  45909515 aaatcaatgtatgtcccaccactttatgtgggttccatttccaaattgtaggtcctacattgattttacccaataaaagagtgagtgttagagagagt 45909612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 29; E-Value: 0.0000002
Query Start/End: Original strand, 58 - 106
Target Start/End: Original strand, 17749804 - 17749852
Alignment:
Q  58 gacccacaatgatttaaaccaataagagattgagtattagagagagtgt 106  Q
    |||||||| |||||||| ||||| ||||| ||||| |||||||||||||    
T  17749804 gacccacattgatttaacccaatgagagagtgagtgttagagagagtgt 17749852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 28; E-Value: 0.0000006
Query Start/End: Original strand, 8 - 59
Target Start/End: Original strand, 12271045 - 12271095
Alignment:
Q  8 aaatcaatgtatgtcccaccattttgtgggggttcagttttcaaagtgtaga 59  Q
    ||||||||||||||||||||| ||||| | |||||  |||||||||||||||    
T  12271045 aaatcaatgtatgtcccaccactttgt-gtggttctattttcaaagtgtaga 12271095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 28; E-Value: 0.0000006
Query Start/End: Original strand, 50 - 101
Target Start/End: Original strand, 31759864 - 31759915
Alignment:
Q  50 aaagtgtagacccacaatgatttaaaccaataagagattgagtattagagag 101  Q
    ||||| ||||| | ||||||||||| ||||||||| | ||||||||||||||    
T  31759864 aaagtatagactcgcaatgatttaagccaataagaaaatgagtattagagag 31759915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 28; E-Value: 0.0000006
Query Start/End: Original strand, 61 - 108
Target Start/End: Complemental strand, 32943885 - 32943838
Alignment:
Q  61 ccacaatgatttaaaccaataagagattgagtattagagagagtgttg 108  Q
    |||||||||| ||||| ||||||| | || ||||||||||||||||||    
T  32943885 ccacaatgatataaactaataagatagtgggtattagagagagtgttg 32943838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0018 (Bit Score: 71; Significance: 1e-32; HSPs: 1)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 71; E-Value: 1e-32
Query Start/End: Original strand, 9 - 107
Target Start/End: Original strand, 27872 - 27970
Alignment:
Q  9 aatcaatgtatgtcccaccattttgtgggggttcagttttcaaagtgtagacccacaatgatttaaaccaataagagattgagtattagagagagtgtt 107  Q
    |||||||||||||||||||| |||||| ||||||  ||| |||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||    
T  27872 aatcaatgtatgtcccaccactttgtgtgggttctatttccaaagtgtagacccacaatgatttaaaccaataagagagtgagtattaaagagagtgtt 27970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 70; Significance: 5e-32; HSPs: 37)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 70; E-Value: 5e-32
Query Start/End: Original strand, 7 - 116
Target Start/End: Complemental strand, 10142098 - 10141989
Alignment:
Q  7 aaaatcaatgtatgtcccaccattttgtgggggttcagttttcaaagtgtagacccacaatgatttaaaccaataagagattgagtattagagagagtgt 106  Q
    |||||||||||||||||||||| ||||||  |||||  ||||||||||||||||| ||||| ||||||| |||||||||| ||||| |||||||||||||    
T  10142098 aaaatcaatgtatgtcccaccactttgtgttggttccattttcaaagtgtagaccaacaattatttaaatcaataagagagtgagtgttagagagagtgt 10141999  T
Q  107 tgctagcatt 116  Q
    ||||||||||    
T  10141998 tgctagcatt 10141989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 67; E-Value: 3e-30
Query Start/End: Original strand, 7 - 101
Target Start/End: Original strand, 37455407 - 37455500
Alignment:
Q  7 aaaatcaatgtatgtcccaccattttgtgggggttcagttttcaaagtgtagacccacaatgatttaaaccaataagagattgagtattagagag 101  Q
    ||||||||||||||| ||||||||||||||||||||| |||||||||||||||| |||||| | |||||||||||||||| ||||||||||||||    
T  37455407 aaaatcaatgtatgttccaccattttgtgggggttcaattttcaaagtgtagactcacaat-aattaaaccaataagagagtgagtattagagag 37455500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 64; E-Value: 2e-28
Query Start/End: Original strand, 8 - 107
Target Start/End: Complemental strand, 28490843 - 28490744
Alignment:
Q  8 aaatcaatgtatgtcccaccattttgtgggggttcagttttcaaagtgtagacccacaatgatttaaaccaataagagattgagtattagagagagtgtt 107  Q
    ||||||| ||||||||||||| ||||||   ||||| |||| |||||||||||||||||| |||||||||||||||||| ||||||||||||||||||||    
T  28490843 aaatcaaagtatgtcccaccactttgtgtaagttcaattttgaaagtgtagacccacaataatttaaaccaataagagagtgagtattagagagagtgtt 28490744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 61; E-Value: 1e-26
Query Start/End: Original strand, 7 - 91
Target Start/End: Original strand, 39246666 - 39246750
Alignment:
Q  7 aaaatcaatgtatgtcccaccattttgtgggggttcagttttcaaagtgtagacccacaatgatttaaaccaataagagattgag 91  Q
    |||||||||||||||||||||| |||||| | |||||||||||||||||||||||||||||  ||||||||||||||||| ||||    
T  39246666 aaaatcaatgtatgtcccaccactttgtgtgagttcagttttcaaagtgtagacccacaatactttaaaccaataagagagtgag 39246750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 60; E-Value: 5e-26
Query Start/End: Original strand, 7 - 86
Target Start/End: Original strand, 34368418 - 34368497
Alignment:
Q  7 aaaatcaatgtatgtcccaccattttgtgggggttcagttttcaaagtgtagacccacaatgatttaaaccaataagaga 86  Q
    |||| |||||||||| |||||| |||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  34368418 aaaaccaatgtatgttccaccactttgtgtgggttcatttttcaaagtgtagacccacaatgatttaaaccaataagaga 34368497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 58; E-Value: 7e-25
Query Start/End: Original strand, 8 - 121
Target Start/End: Complemental strand, 17537223 - 17537110
Alignment:
Q  8 aaatcaatgtatgtcccaccattttgtgggggttcagttttcaaagtgtagacccacaatgatttaaaccaataagagattgagtattagagagagtgtt 107  Q
    ||||||||||||||||||||| ||| ||  |||| | ||||||||||||||| ||| |||||||||||||||||||||| ||| ||| ||||||| ||||    
T  17537223 aaatcaatgtatgtcccaccaatttttgttggtttaattttcaaagtgtagatccataatgatttaaaccaataagagagtgaatataagagagattgtt 17537124  T
Q  108 gctagcattcctct 121  Q
    | ||||||| ||||    
T  17537123 gttagcattactct 17537110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 57; E-Value: 3e-24
Query Start/End: Original strand, 8 - 96
Target Start/End: Complemental strand, 5413858 - 5413770
Alignment:
Q  8 aaatcaatgtatgtcccaccattttgtgggggttcagttttcaaagtgtagacccacaatgatttaaaccaataagagattgagtatta 96  Q
    ||||||||||||||||||||| |||||| ||||||| ||| ||||||||||||||| |||||||||||||||||| | | |||||||||    
T  5413858 aaatcaatgtatgtcccaccactttgtgtgggttcaatttacaaagtgtagacccataatgatttaaaccaataaaaaagtgagtatta 5413770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 56; E-Value: 1e-23
Query Start/End: Original strand, 8 - 111
Target Start/End: Complemental strand, 25710593 - 25710490
Alignment:
Q  8 aaatcaatgtatgtcccaccattttgtgggggttcagttttcaaagtgtagacccacaatgatttaaaccaataagagattgagtattagagagagtgtt 107  Q
    |||||||||||||||| |||| || ||  | ||||  ||||||||||||||||||||||| |||||||||||||||||| ||| ||||| ||||||||||    
T  25710593 aaatcaatgtatgtcctaccacttcgtatgagttctattttcaaagtgtagacccacaataatttaaaccaataagagaatgaatattaaagagagtgtt 25710494  T
Q  108 gcta 111  Q
    ||||    
T  25710493 gcta 25710490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 54; E-Value: 2e-22
Query Start/End: Original strand, 8 - 105
Target Start/End: Complemental strand, 41105691 - 41105594
Alignment:
Q  8 aaatcaatgtatgtcccaccattttgtgggggttcagttttcaaagtgtagacccacaatgatttaaaccaataagagattgagtattagagagagtg 105  Q
    ||||||| | ||||||||| | |||||| ||||||| ||||||||||| | ||||||| ||||||||||||||||||||  |||||||||||||||||    
T  41105691 aaatcaagggatgtcccactactttgtgtgggttcaattttcaaagtgcatacccacagtgatttaaaccaataagagagcgagtattagagagagtg 41105594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 52; E-Value: 3e-21
Query Start/End: Original strand, 7 - 101
Target Start/End: Complemental strand, 28434938 - 28434846
Alignment:
Q  7 aaaatcaatgtatgtcccaccattttgtgggggttcagttttcaaagtgtagacccacaatgatttaaaccaataagagattgagtattagagag 101  Q
    ||||||||| |||||||||||| | ||| ||  |||| |||||||||| ||||||||||||||||||||||||||||| | ||||||||||||||    
T  28434938 aaaatcaatatatgtcccaccactgtgttgg--ttcaattttcaaagtttagacccacaatgatttaaaccaataagaaaatgagtattagagag 28434846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 52; E-Value: 3e-21
Query Start/End: Original strand, 8 - 107
Target Start/End: Complemental strand, 34384812 - 34384713
Alignment:
Q  8 aaatcaatgtatgtcccaccattttgtgggggttcagttttcaaagtgtagacccacaatgatttaaaccaataagagattgagtattagagagagtgtt 107  Q
    ||||||||||||||||||| |||||||| | ||||| |||||||| | ||||| |||||||||||| ||| |||| ||| ||||||||| ||||||||||    
T  34384812 aaatcaatgtatgtcccactattttgtgtgagttcaattttcaaattatagactcacaatgatttagaccgataaaagagtgagtattaaagagagtgtt 34384713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 52; E-Value: 3e-21
Query Start/End: Original strand, 8 - 107
Target Start/End: Complemental strand, 41330514 - 41330415
Alignment:
Q  8 aaatcaatgtatgtcccaccattttgtgggggttcagttttcaaagtgtagacccacaatgatttaaaccaataagagattgagtattagagagagtgtt 107  Q
    |||| ||||||||||||| || ||||||  |||||| |||||||||||||||| ||||||||||||||||||||||| ||  ||||||| |||| |||||    
T  41330514 aaattaatgtatgtcccatcactttgtgtaggttcaattttcaaagtgtagactcacaatgatttaaaccaataagaaatgtagtattaaagagtgtgtt 41330415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 51; E-Value: 1e-20
Query Start/End: Original strand, 8 - 82
Target Start/End: Original strand, 25919270 - 25919344
Alignment:
Q  8 aaatcaatgtatgtcccaccattttgtgggggttcagttttcaaagtgtagacccacaatgatttaaaccaataa 82  Q
    |||||||| |||||| |||||||||||| ||| ||| |||||||||||||||| |||||||||||||||||||||    
T  25919270 aaatcaatatatgtctcaccattttgtgtgggatcaattttcaaagtgtagactcacaatgatttaaaccaataa 25919344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 50; E-Value: 4e-20
Query Start/End: Original strand, 8 - 101
Target Start/End: Original strand, 10950145 - 10950238
Alignment:
Q  8 aaatcaatgtatgtcccaccattttgtgggggttcagttttcaaagtgtagacccacaatgatttaaaccaataagagattgagtattagagag 101  Q
    |||||||||||||||||||||||||||  || |||  |||||||||| ||||| || |||||||||||| ||||||||| ||| ||||||||||    
T  10950145 aaatcaatgtatgtcccaccattttgtatggattctattttcaaagtatagactcataatgatttaaactaataagagaatgaatattagagag 10950238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 49; E-Value: 2e-19
Query Start/End: Original strand, 10 - 102
Target Start/End: Original strand, 14553573 - 14553665
Alignment:
Q  10 atcaatgtatgtcccaccattttgtgggggttcagttttcaaagtgtagacccacaatgatttaaaccaataagagattgagtattagagaga 102  Q
    |||||||||||||| ||||||||  |  |||||| |||| |||||||||||||||||| | ||||||||| |||||| |||||||||||||||    
T  14553573 atcaatgtatgtcctaccattttacgttggttcaatttttaaagtgtagacccacaataaattaaaccaacaagagagtgagtattagagaga 14553665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 49; E-Value: 2e-19
Query Start/End: Original strand, 8 - 116
Target Start/End: Complemental strand, 28090350 - 28090242
Alignment:
Q  8 aaatcaatgtatgtcccaccattttgtgggggttcagttttcaaagtgtagacccacaatgatttaaaccaataagagattgagtattagagagagtgtt 107  Q
    ||||||||  ||||||||||| |||||| | ||||| |||||||||| |||| | |||||||||||||||||||| ||| ||| ||||| | ||||||||    
T  28090350 aaatcaattcatgtcccaccactttgtgtgagttcaattttcaaagtttagatcaacaatgatttaaaccaataaaagagtgaatattacatagagtgtt 28090251  T
Q  108 gctagcatt 116  Q
    | |||||||    
T  28090250 gttagcatt 28090242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 48; E-Value: 7e-19
Query Start/End: Original strand, 8 - 107
Target Start/End: Complemental strand, 30325995 - 30325896
Alignment:
Q  8 aaatcaatgtatgtcccaccattttgtgggggttcagttttcaaagtgtagacccacaatgatttaaaccaataagagattgagtattagagagagtgtt 107  Q
    ||||||||||||||| ||||| ||| || | ||||  | | ||||||||||| || ||||||||||||||||||||| | ||||||||||||||||||||    
T  30325995 aaatcaatgtatgtctcaccactttatgcgagttctatctccaaagtgtagatccgcaatgatttaaaccaataagaaagtgagtattagagagagtgtt 30325896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 47; E-Value: 3e-18
Query Start/End: Original strand, 12 - 82
Target Start/End: Complemental strand, 31885948 - 31885878
Alignment:
Q  12 caatgtatgtcccaccattttgtgggggttcagttttcaaagtgtagacccacaatgatttaaaccaataa 82  Q
    ||||| ||||||||||||||| ||| |||||| ||||||||||||||| | ||||||||||||||||||||    
T  31885948 caatggatgtcccaccattttctggaggttcaattttcaaagtgtagatctacaatgatttaaaccaataa 31885878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 46; E-Value: 1e-17
Query Start/End: Original strand, 28 - 101
Target Start/End: Complemental strand, 28223877 - 28223804
Alignment:
Q  28 attttgtgggggttcagttttcaaagtgtagacccacaatgatttaaaccaataagagattgagtattagagag 101  Q
    |||||||| ||| ||| |||||||||| |||||||| |||||||||||||||||| ||| ||||||||||||||    
T  28223877 attttgtgtgggctcaattttcaaagtatagacccataatgatttaaaccaataaaagagtgagtattagagag 28223804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 45; E-Value: 4e-17
Query Start/End: Original strand, 8 - 108
Target Start/End: Original strand, 43405452 - 43405552
Alignment:
Q  8 aaatcaatgtatgtcccaccattttgtgggggttcagttttcaaagtgtagacccacaatgatttaaaccaataagagattgagtattagagagagtgtt 107  Q
    ||||||||||||||| ||||| |||||    ||||  ||| ||||||||||||||||||||||||||| |||||||||| ||| ||| |||| |||||||    
T  43405452 aaatcaatgtatgtctcaccactttgtatatgttctatttccaaagtgtagacccacaatgatttaaatcaataagagagtgaatatcagagggagtgtt 43405551  T
Q  108 g 108  Q
    |    
T  43405552 g 43405552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 43; E-Value: 7e-16
Query Start/End: Original strand, 8 - 82
Target Start/End: Complemental strand, 36338011 - 36337937
Alignment:
Q  8 aaatcaatgtatgtcccaccattttgtgggggttcagttttcaaagtgtagacccacaatgatttaaaccaataa 82  Q
    |||| |||||||||||||  ||||||||   ||||| ||| ||||||||||||||||||||||||||||||||||    
T  36338011 aaattaatgtatgtcccataattttgtgtatgttcaatttccaaagtgtagacccacaatgatttaaaccaataa 36337937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 42; E-Value: 0.000000000000003
Query Start/End: Original strand, 7 - 80
Target Start/End: Original strand, 25630865 - 25630938
Alignment:
Q  7 aaaatcaatgtatgtcccaccattttgtgggggttcagttttcaaagtgtagacccacaatgatttaaaccaat 80  Q
    ||||| ||||||| |||||| |||||||   |||||| |||||||||||||||||||| |||||||||||||||    
T  25630865 aaaattaatgtatatcccactattttgtataggttcaattttcaaagtgtagacccacgatgatttaaaccaat 25630938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 40; E-Value: 0.00000000000004
Query Start/End: Original strand, 13 - 100
Target Start/End: Complemental strand, 1923668 - 1923581
Alignment:
Q  13 aatgtatgtcccaccattttgtgggggttcagttttcaaagtgtagacccacaatgatttaaaccaataagagattgagtattagaga 100  Q
    |||||||||| ||||| |||||| | ||||| |||| |||||||||    |||||||||||||||||||||| | |||||||||||||    
T  1923668 aatgtatgtcacaccactttgtgtgagttcaatttttaaagtgtagttttacaatgatttaaaccaataagataatgagtattagaga 1923581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 39; E-Value: 0.0000000000002
Query Start/End: Original strand, 8 - 98
Target Start/End: Complemental strand, 34480072 - 34479982
Alignment:
Q  8 aaatcaatgtatgtcccaccattttgtgggggttcagttttcaaagtgtagacccacaatgatttaaaccaataagagattgagtattaga 98  Q
    |||||||| ||| || |||||||||||| |  |||| |||| |||||| ||||||||||| ||||||| | |||||||||| |||||||||    
T  34480072 aaatcaatatatatctcaccattttgtgtgaattcaatttttaaagtgcagacccacaataatttaaatcgataagagattaagtattaga 34479982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 35; E-Value: 0.00000000004
Query Start/End: Original strand, 8 - 86
Target Start/End: Complemental strand, 27592573 - 27592495
Alignment:
Q  8 aaatcaatgtatgtcccaccattttgtgggggttcagttttcaaagtgtagacccacaatgatttaaaccaataagaga 86  Q
    ||||||||||||||| ||||| ||| || | ||||  ||| ||||||||||| |  |||||||||||||||||||||||    
T  27592573 aaatcaatgtatgtctcaccactttatgcgagttctatttccaaagtgtagatctgcaatgatttaaaccaataagaga 27592495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 33; E-Value: 0.0000000006
Query Start/End: Original strand, 50 - 102
Target Start/End: Complemental strand, 17434928 - 17434876
Alignment:
Q  50 aaagtgtagacccacaatgatttaaaccaataagagattgagtattagagaga 102  Q
    |||||||||||||||| |||||||||||||||| ||| |||  ||||||||||    
T  17434928 aaagtgtagacccacattgatttaaaccaataaaagagtgaacattagagaga 17434876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 33; E-Value: 0.0000000006
Query Start/End: Original strand, 68 - 116
Target Start/End: Complemental strand, 38607212 - 38607164
Alignment:
Q  68 gatttaaaccaataagagattgagtattagagagagtgttgctagcatt 116  Q
    ||||||||| ||||||||| | ||||||| |||||||||||||||||||    
T  38607212 gatttaaacaaataagagagtaagtattaaagagagtgttgctagcatt 38607164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 32; E-Value: 0.000000002
Query Start/End: Original strand, 19 - 82
Target Start/End: Original strand, 4714819 - 4714882
Alignment:
Q  19 tgtcccaccattttgtgggggttcagttttcaaagtgtagacccacaatgatttaaaccaataa 82  Q
    ||||||| ||||||||| ||||||  |||||||| ||||||  |||||||||||| ||||||||    
T  4714819 tgtcccatcattttgtgtgggttctattttcaaaatgtagatacacaatgatttataccaataa 4714882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 32; E-Value: 0.000000002
Query Start/End: Original strand, 56 - 107
Target Start/End: Complemental strand, 5465725 - 5465674
Alignment:
Q  56 tagacccacaatgatttaaaccaataagagattgagtattagagagagtgtt 107  Q
    |||||||| |||||||||||||||||||||| ||| ||||||| | ||||||    
T  5465725 tagacccataatgatttaaaccaataagagagtgaatattagaaaaagtgtt 5465674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 31; E-Value: 0.00000001
Query Start/End: Original strand, 8 - 58
Target Start/End: Complemental strand, 13456286 - 13456236
Alignment:
Q  8 aaatcaatgtatgtcccaccattttgtgggggttcagttttcaaagtgtag 58  Q
    |||||||||||| |||||||||||| || ||||||  ||||||||||||||    
T  13456286 aaatcaatgtatttcccaccattttatgtgggttccattttcaaagtgtag 13456236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 31; E-Value: 0.00000001
Query Start/End: Original strand, 8 - 85
Target Start/End: Complemental strand, 28155821 - 28155746
Alignment:
Q  8 aaatcaatgtatgtcccaccattttgtgggggttcagttttcaaagtgtagacccacaatgatttaaaccaataagag 85  Q
    |||||||||||||| | |||||||| |  ||||| | |||||||||||||||  ||||||| |||| |||||||||||    
T  28155821 aaatcaatgtatgttcaaccattttttatgggtttaattttcaaagtgtaga--cacaatgttttataccaataagag 28155746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 31; E-Value: 0.00000001
Query Start/End: Original strand, 67 - 121
Target Start/End: Original strand, 28434932 - 28434986
Alignment:
Q  67 tgatttaaaccaataagagattgagtattagagagagtgttgctagcattcctct 121  Q
    |||||| | ||||||| ||| | ||| ||||||||||||||||||||||||||||    
T  28434932 tgattttatccaataaaagaattagtgttagagagagtgttgctagcattcctct 28434986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 31; E-Value: 0.00000001
Query Start/End: Original strand, 15 - 105
Target Start/End: Complemental strand, 28611892 - 28611802
Alignment:
Q  15 tgtatgtcccaccattttgtgggggttcagttttcaaagtgtagacccacaatgatttaaaccaataagagattgagtattagagagagtg 105  Q
    ||||||||||| || |||||  | ||||  |||| ||||||||||| |||||||||||||| |||||| ||| |  || ||||||||||||    
T  28611892 tgtatgtcccatcactttgtatgagttccatttttaaagtgtagacgcacaatgatttaaatcaataaaagagttggtgttagagagagtg 28611802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 30; E-Value: 0.00000004
Query Start/End: Original strand, 45 - 82
Target Start/End: Original strand, 4427338 - 4427375
Alignment:
Q  45 ttttcaaagtgtagacccacaatgatttaaaccaataa 82  Q
    |||||||||||||||| ||||||||||||||| |||||    
T  4427338 ttttcaaagtgtagactcacaatgatttaaacaaataa 4427375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 30; E-Value: 0.00000004
Query Start/End: Original strand, 7 - 104
Target Start/End: Complemental strand, 10666810 - 10666713
Alignment:
Q  7 aaaatcaatgtatgtcccaccattttgtgggggttcagttttcaaagtgtagacccacaatgatttaaaccaataagagattgagtattagagagagt 104  Q
    ||||||| ||||| ||| |||| ||| || ||||||  |||| ||| ||||||| |||| | |||||||||||||||||| ||| | ||| |||||||    
T  10666810 aaaatcattgtatatcctaccactttatgtgggttccatttttaaattgtagactcacattaatttaaaccaataagagagtgaatgttaaagagagt 10666713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 29; E-Value: 0.0000002
Query Start/End: Original strand, 49 - 108
Target Start/End: Complemental strand, 25002086 - 25002026
Alignment:
Q  49 caaagtgt-agacccacaatgatttaaaccaataagagattgagtattagagagagtgttg 108  Q
    |||||||| |||||||| ||||||||||||||| ||| | ||||| || ||||||||||||    
T  25002086 caaagtgtgagacccactatgatttaaaccaattagaaagtgagtgttggagagagtgttg 25002026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 29; E-Value: 0.0000002
Query Start/End: Original strand, 65 - 101
Target Start/End: Original strand, 41511772 - 41511808
Alignment:
Q  65 aatgatttaaaccaataagagattgagtattagagag 101  Q
    ||||||||||| |||||||||||| ||||||||||||    
T  41511772 aatgatttaaatcaataagagattaagtattagagag 41511808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 70; Significance: 5e-32; HSPs: 38)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 70; E-Value: 5e-32
Query Start/End: Original strand, 8 - 101
Target Start/End: Original strand, 9470140 - 9470233
Alignment:
Q  8 aaatcaatgtatgtcccaccattttgtgggggttcagttttcaaagtgtagacccacaatgatttaaaccaataagagattgagtattagagag 101  Q
    ||||||||||||||||||||| |||||  ||||||| |||||||||||||||||||||||||||||||||||||||||| ||| ||||||||||    
T  9470140 aaatcaatgtatgtcccaccactttgtttgggttcaattttcaaagtgtagacccacaatgatttaaaccaataagagagtgaatattagagag 9470233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 68; E-Value: 8e-31
Query Start/End: Original strand, 8 - 107
Target Start/End: Complemental strand, 26767882 - 26767783
Alignment:
Q  8 aaatcaatgtatgtcccaccattttgtgggggttcagttttcaaagtgtagacccacaatgatttaaaccaataagagattgagtattagagagagtgtt 107  Q
    ||||||||||||||||||||| |||||| ||||||| |||||||| ||||||| ||||||||||||||||||||| ||| ||||||||||| ||||||||    
T  26767882 aaatcaatgtatgtcccaccactttgtgagggttcaattttcaaattgtagactcacaatgatttaaaccaataaaagagtgagtattagatagagtgtt 26767783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 68; E-Value: 8e-31
Query Start/End: Original strand, 8 - 107
Target Start/End: Original strand, 38464222 - 38464321
Alignment:
Q  8 aaatcaatgtatgtcccaccattttgtgggggttcagttttcaaagtgtagacccacaatgatttaaaccaataagagattgagtattagagagagtgtt 107  Q
    ||||||||||||||| || || |||| | ||||||| |||||||||||||||||||||||||||||||||||||||||| | ||||||||||||||||||    
T  38464222 aaatcaatgtatgtctcatcactttgcgtgggttcaattttcaaagtgtagacccacaatgatttaaaccaataagagagtaagtattagagagagtgtt 38464321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 64; E-Value: 2e-28
Query Start/End: Original strand, 8 - 107
Target Start/End: Original strand, 12989250 - 12989349
Alignment:
Q  8 aaatcaatgtatgtcccaccattttgtgggggttcagttttcaaagtgtagacccacaatgatttaaaccaataagagattgagtattagagagagtgtt 107  Q
    ||||||||||||||||||||| |||||  || |||  ||| | |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  12989250 aaatcaatgtatgtcccaccactttgtatggattctatttccgaagtgtagacccacaatgatttaaaccaataagagagtgagtattagagagagtgtt 12989349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 64; E-Value: 2e-28
Query Start/End: Original strand, 7 - 102
Target Start/End: Original strand, 44274292 - 44274387
Alignment:
Q  7 aaaatcaatgtatgtcccaccattttgtgggggttcagttttcaaagtgtagacccacaatgatttaaaccaataagagattgagtattagagaga 102  Q
    |||||||||||||||||||||| |||||| |||||||  |||||||||||||| |||||||||||||||||||||| ||| ||||| |||||||||    
T  44274292 aaaatcaatgtatgtcccaccactttgtgtgggttcaactttcaaagtgtagatccacaatgatttaaaccaataacagagtgagtgttagagaga 44274387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 63; E-Value: 8e-28
Query Start/End: Original strand, 13 - 107
Target Start/End: Original strand, 10981582 - 10981676
Alignment:
Q  13 aatgtatgtcccaccattttgtgggggttcagttttcaaagtgtagacccacaatgatttaaaccaataagagattgagtattagagagagtgtt 107  Q
    |||||||||||||||| |||||| ||||||  ||| ||| |||||||||||||||||||||||||||||||||| |||||||||||| |||||||    
T  10981582 aatgtatgtcccaccactttgtgtgggttctatttccaatgtgtagacccacaatgatttaaaccaataagagagtgagtattagagggagtgtt 10981676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 55; E-Value: 5e-23
Query Start/End: Original strand, 18 - 100
Target Start/End: Original strand, 15884498 - 15884580
Alignment:
Q  18 atgtcccaccattttgtgggggttcagttttcaaagtgtagacccacaatgatttaaaccaataagagattgagtattagaga 100  Q
    ||||||||||| |||||| ||||||| |||||||| |||||||||||||| |||||||||||||||| | |||||||||||||    
T  15884498 atgtcccaccactttgtgtgggttcaattttcaaaatgtagacccacaattatttaaaccaataagataatgagtattagaga 15884580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 52; E-Value: 3e-21
Query Start/End: Original strand, 8 - 107
Target Start/End: Complemental strand, 6980241 - 6980142
Alignment:
Q  8 aaatcaatgtatgtcccaccattttgtgggggttcagttttcaaagtgtagacccacaatgatttaaaccaataagagattgagtattagagagagtgtt 107  Q
    ||||||| |||||| | |||| |||||| | ||||| |||||||||| ||||||||||||||||| ||| ||||||||| ||||||||||||| ||||||    
T  6980241 aaatcaaggtatgttctaccactttgtgtgagttcaattttcaaagtatagacccacaatgatttcaactaataagagagtgagtattagagaaagtgtt 6980142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 52; E-Value: 3e-21
Query Start/End: Original strand, 17 - 117
Target Start/End: Complemental strand, 7919382 - 7919280
Alignment:
Q  17 tatgtcccaccattttgtgggggttcagttttcaaagtgtagacccacaatgatttaaaccaataagagattgagtatt--agagagagtgttgctagca 114  Q
    |||||||||||| |||||| || |||| ||||||||||||||| |||||||||||||||||||||||||| | |||  |  | |||||||||||||||||    
T  7919382 tatgtcccaccactttgtgtggattcaattttcaaagtgtagatccacaatgatttaaaccaataagagagtaagtgctcaaaagagagtgttgctagca 7919283  T
Q  115 ttc 117  Q
    |||    
T  7919282 ttc 7919280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 49; E-Value: 2e-19
Query Start/End: Original strand, 7 - 83
Target Start/End: Complemental strand, 18511331 - 18511255
Alignment:
Q  7 aaaatcaatgtatgtcccaccattttgtgggggttcagttttcaaagtgtagacccacaatgatttaaaccaataag 83  Q
    |||||||||||||||||||| ||||| || ||||||| ||||||||||| ||||| |||||| ||||||||||||||    
T  18511331 aaaatcaatgtatgtcccactattttatgtgggttcaattttcaaagtgaagacctacaatgttttaaaccaataag 18511255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 48; E-Value: 7e-19
Query Start/End: Original strand, 24 - 107
Target Start/End: Complemental strand, 32856240 - 32856157
Alignment:
Q  24 caccattttgtgggggttcagttttcaaagtgtagacccacaatgatttaaaccaataagagattgagtattagagagagtgtt 107  Q
    ||||| |||||| ||||| | ||||||||||||||| ||| | |||||||||||||||||||||||||||||||| || |||||    
T  32856240 caccactttgtgtgggttgaattttcaaagtgtagatccatagtgatttaaaccaataagagattgagtattagaaagggtgtt 32856157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 48; E-Value: 7e-19
Query Start/End: Original strand, 7 - 94
Target Start/End: Complemental strand, 35316523 - 35316436
Alignment:
Q  7 aaaatcaatgtatgtcccaccattttgtgggggttcagttttcaaagtgtagacccacaatgatttaaaccaataagagattgagtat 94  Q
    ||||| |||||||||||||||||||| ||  | |||| |||| ||| |||||||||||||||||||||| |||||||||| |||||||    
T  35316523 aaaattaatgtatgtcccaccattttatgttgattcaatttttaaattgtagacccacaatgatttaaatcaataagagagtgagtat 35316436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 47; E-Value: 3e-18
Query Start/End: Original strand, 45 - 107
Target Start/End: Original strand, 45554655 - 45554717
Alignment:
Q  45 ttttcaaagtgtagacccacaatgatttaaaccaataagagattgagtattagagagagtgtt 107  Q
    ||||| |||||||||||||||||||||||||||||||||| | ||||||||||||||| ||||    
T  45554655 ttttccaagtgtagacccacaatgatttaaaccaataagaaagtgagtattagagagaatgtt 45554717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 46; E-Value: 1e-17
Query Start/End: Original strand, 14 - 106
Target Start/End: Original strand, 11539490 - 11539583
Alignment:
Q  14 atgtatgtcccaccattttgtgggggttcagttttcaaagtgtagacccacaat-gatttaaaccaataagagattgagtattagagagagtgt 106  Q
    |||||||| ||| || |||||| | ||||  ||||||||||||||| ||| ||| ||||||||||||||||||| |||||||||||||||||||    
T  11539490 atgtatgttccatcactttgtgtgagttctattttcaaagtgtagatccagaattgatttaaaccaataagagagtgagtattagagagagtgt 11539583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 45; E-Value: 4e-17
Query Start/End: Original strand, 8 - 104
Target Start/End: Complemental strand, 36471959 - 36471863
Alignment:
Q  8 aaatcaatgtatgtcccaccattttgtgggggttcagttttcaaagtgtagacccacaatgatttaaaccaataagagattgagtattagagagagt 104  Q
    ||||||| ||||||| ||||| ||| |  || |||| |||||||| |||| || ||||||||||||||||||||| ||| |||||||||||||||||    
T  36471959 aaatcaaagtatgtctcaccactttttatggattcaattttcaaaatgtaaactcacaatgatttaaaccaataaaagagtgagtattagagagagt 36471863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 43; E-Value: 7e-16
Query Start/End: Original strand, 14 - 96
Target Start/End: Complemental strand, 34142254 - 34142172
Alignment:
Q  14 atgtatgtcccaccattttgtgggggttcagttttcaaagtgtagacccacaatgatttaaaccaataagagattgagtatta 96  Q
    ||||||||| ||| | |||||| ||||||| |||||||||||||||  ||||||| ||||||||||||||||| ||| |||||    
T  34142254 atgtatgtctcactactttgtgtgggttcaattttcaaagtgtagagtcacaatggtttaaaccaataagagagtgaatatta 34142172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 42; E-Value: 0.000000000000003
Query Start/End: Original strand, 45 - 94
Target Start/End: Complemental strand, 4552924 - 4552875
Alignment:
Q  45 ttttcaaagtgtagacccacaatgatttaaaccaataagagattgagtat 94  Q
    ||||||| |||||||||||||||||||||||||||||||||| |||||||    
T  4552924 ttttcaatgtgtagacccacaatgatttaaaccaataagagagtgagtat 4552875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 42; E-Value: 0.000000000000003
Query Start/End: Original strand, 8 - 81
Target Start/End: Complemental strand, 16719551 - 16719478
Alignment:
Q  8 aaatcaatgtatgtcccaccattttgtgggggttcagttttcaaagtgtagacccacaatgatttaaaccaata 81  Q
    |||||||||||| |||||||||||  ||  |||||| |||||||| ||||||||| ||||||||||||||||||    
T  16719551 aaatcaatgtatatcccaccatttcatgtaggttcaattttcaaaatgtagacccgcaatgatttaaaccaata 16719478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 42; E-Value: 0.000000000000003
Query Start/End: Original strand, 8 - 101
Target Start/End: Original strand, 19639152 - 19639245
Alignment:
Q  8 aaatcaatgtatgtcccaccattttgtgggggttcagttttcaaagtgtagacccacaatgatttaaaccaataagagattgagtattagagag 101  Q
    ||||||||||||||| || ||  | ||| | ||||| ||||||||||| ||||| |||||||||||||||||||||||| ||| ||||| ||||    
T  19639152 aaatcaatgtatgtctcatcacatagtgtgagttcaattttcaaagtgcagacctacaatgatttaaaccaataagagagtgaatattatagag 19639245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 42; E-Value: 0.000000000000003
Query Start/End: Original strand, 8 - 101
Target Start/End: Original strand, 19837745 - 19837838
Alignment:
Q  8 aaatcaatgtatgtcccaccattttgtgggggttcagttttcaaagtgtagacccacaatgatttaaaccaataagagattgagtattagagag 101  Q
    ||||||||||||||| || ||  | ||| | ||||| ||||||||||| ||||| |||||||||||||||||||||||| ||| ||||| ||||    
T  19837745 aaatcaatgtatgtctcatcacatagtgtgagttcaattttcaaagtgcagacctacaatgatttaaaccaataagagagtgaatattatagag 19837838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 42; E-Value: 0.000000000000003
Query Start/End: Original strand, 45 - 106
Target Start/End: Complemental strand, 30718411 - 30718350
Alignment:
Q  45 ttttcaaagtgtagacccacaatgatttaaaccaataagagattgagtattagagagagtgt 106  Q
    |||||||||||||||| ||||||||||||||||||||| | | ||| |||||||||||||||    
T  30718411 ttttcaaagtgtagactcacaatgatttaaaccaataaaaaagtgaatattagagagagtgt 30718350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 38; E-Value: 0.0000000000006
Query Start/End: Original strand, 7 - 107
Target Start/End: Complemental strand, 25238400 - 25238299
Alignment:
Q  7 aaaatcaatgtatgtcccaccattt-tgtgggggttcagttttcaaagtgtagacccacaatgatttaaaccaataagagattgagtattagagagagtg 105  Q
    |||||||||||||||| || || || | || ||||||  ||||||||||||||| |||||||||||||||||||||| | | |||||  |||||| ||||    
T  25238400 aaaatcaatgtatgtctcatcacttctttgtgggttctattttcaaagtgtagatccacaatgatttaaaccaataaaaaagtgagtgctagagaaagtg 25238301  T
Q  106 tt 107  Q
    ||    
T  25238300 tt 25238299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 37; E-Value: 0.000000000003
Query Start/End: Original strand, 13 - 101
Target Start/End: Original strand, 24497256 - 24497344
Alignment:
Q  13 aatgtatgtcccaccattttgtgggggttcagttttcaaagtgtagacccacaatgatttaaaccaataagagattgagtattagagag 101  Q
    ||||||||| ||| ||||||||| || ||   ||||||||||||||||| | | |||||||||| |||| |||| ||||||||||||||    
T  24497256 aatgtatgttccatcattttgtgtggattttattttcaaagtgtagaccaagagtgatttaaactaataggagagtgagtattagagag 24497344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 37; E-Value: 0.000000000003
Query Start/End: Original strand, 8 - 100
Target Start/End: Complemental strand, 27494572 - 27494480
Alignment:
Q  8 aaatcaatgtatgtcccaccattttgtgggggttcagttttcaaagtgtagacccacaatgatttaaaccaataagagattgagtattagaga 100  Q
    |||||||||| ||| |||||| ||| |   |||||| |||||||||  ||||||| |||||||||||| |||||| ||| |||||||||||||    
T  27494572 aaatcaatgtttgttccaccaatttatataggttcacttttcaaagcatagacccgcaatgatttaaatcaataaaagagtgagtattagaga 27494480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 36; E-Value: 0.00000000001
Query Start/End: Original strand, 30 - 105
Target Start/End: Complemental strand, 472262 - 472187
Alignment:
Q  30 tttgtgggggttcagttttcaaagtgtagacccacaatgatttaaaccaataagagattgagtattagagagagtg 105  Q
    |||||| | ||||| |||||||| | || | ||||||||||||||||||||||||||  |||||||| ||||||||    
T  472262 tttgtgtgagttcaattttcaaaatatatatccacaatgatttaaaccaataagagagcgagtattaaagagagtg 472187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 36; E-Value: 0.00000000001
Query Start/End: Original strand, 45 - 100
Target Start/End: Complemental strand, 14489623 - 14489568
Alignment:
Q  45 ttttcaaagtgtagacccacaatgatttaaaccaataagagattgagtattagaga 100  Q
    |||| |||||||||| ||||||| |||||||||||||| ||| |||||||||||||    
T  14489623 tttttaaagtgtagatccacaataatttaaaccaataaaagaatgagtattagaga 14489568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 35; E-Value: 0.00000000004
Query Start/End: Original strand, 8 - 101
Target Start/End: Complemental strand, 12098988 - 12098894
Alignment:
Q  8 aaatcaatgtatgtcccaccattttgtgggggttcagttttcaaagtgtagacccacaa-tgatttaaaccaataagagattgagtattagagag 101  Q
    ||||||| ||||||| | ||| |||||  | ||||| ||||||||||||| || ||||| |||||||||| ||||||||| ||||||||| ||||    
T  12098988 aaatcaaagtatgtctcgccactttgtatgagttcaattttcaaagtgtaaactcacaaatgatttaaactaataagagagtgagtattaaagag 12098894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 35; E-Value: 0.00000000004
Query Start/End: Original strand, 7 - 104
Target Start/End: Complemental strand, 24895389 - 24895291
Alignment:
Q  7 aaaatcaatgtatgtcccaccattttgtgggggttcagttttcaaagtgta-gacccacaatgatttaaaccaataagagattgagtattagagagagt 104  Q
    ||||||||||||| | |||||||||| || | ||||  ||| ||||||||| |||||||| |||||||| ||||| | ||| ||||| |||||||||||    
T  24895389 aaaatcaatgtatattccaccattttatgtgagttccatttccaaagtgtatgacccacattgatttaacccaatgaaagagtgagtgttagagagagt 24895291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 32; E-Value: 0.000000002
Query Start/End: Original strand, 8 - 114
Target Start/End: Original strand, 3804643 - 3804750
Alignment:
Q  8 aaatcaatgtatgtccc-accattttgtgggggttcagttttcaaagtgtagacccacaatgatttaaaccaataagagattgagtattagagagagtgt 106  Q
    ||||||||||||||||| | || ||| ||  |||| | ||||||||||||| ||||||||| |||||||  ||||| | | | ||||||| | |||||||    
T  3804643 aaatcaatgtatgtccccatcactttatgtaggtttaattttcaaagtgtacacccacaataatttaaattaataaaatagtaagtattataaagagtgt 3804742  T
Q  107 tgctagca 114  Q
    ||||||||    
T  3804743 tgctagca 3804750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 32; E-Value: 0.000000002
Query Start/End: Original strand, 8 - 59
Target Start/End: Original strand, 15508973 - 15509024
Alignment:
Q  8 aaatcaatgtatgtcccaccattttgtgggggttcagttttcaaagtgtaga 59  Q
    ||||||||||||||||||||||||| || ||||||  ||| |||||||||||    
T  15508973 aaatcaatgtatgtcccaccattttttgtgggttccatttccaaagtgtaga 15509024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 32; E-Value: 0.000000002
Query Start/End: Original strand, 8 - 95
Target Start/End: Original strand, 17188124 - 17188211
Alignment:
Q  8 aaatcaatgtatgtcccaccattttgtgggggttcagttttcaaagtgtagacccacaatgatttaaaccaataagagattgagtatt 95  Q
    |||||||||| | || ||||| |||||| |   ||| |||||||||||||| |||| |||||||||||||||||| | | ||||||||    
T  17188124 aaatcaatgtgtatctcaccactttgtgtgaactcaattttcaaagtgtaggcccagaatgatttaaaccaataaaataatgagtatt 17188211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 32; E-Value: 0.000000002
Query Start/End: Original strand, 8 - 107
Target Start/End: Complemental strand, 37652366 - 37652267
Alignment:
Q  8 aaatcaatgtatgtcccaccattttgtgggggttcagttttcaaagtgtagacccacaatgatttaaaccaataagagattgagtattagagagagtgtt 107  Q
    |||||||||||||| |||||  ||||||   ||||| ||| ||| |||||||  ||||||||||||||||||||| | | ||| ||| ||||||| ||||    
T  37652366 aaatcaatgtatgttccacccctttgtgtatgttcaatttccaacgtgtagattcacaatgatttaaaccaataaaaaagtgaatataagagagaatgtt 37652267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 30; E-Value: 0.00000004
Query Start/End: Original strand, 8 - 120
Target Start/End: Complemental strand, 31395566 - 31395453
Alignment:
Q  8 aaatcaatgtatgtcccaccattttgtgggggttcagttttcaaagtgtagaccc-acaatgatttaaaccaataagagattgagtattagagagagtgt 106  Q
    ||||||||||||||||| ||| ||| || || |||  ||| || |||||||  || ||| | |||| | ||||||| |||||||||  ||||||||||||    
T  31395566 aaatcaatgtatgtccctccactttatgtggattccatttccatagtgtaggtcctacatttatttcacccaataaaagattgagtgctagagagagtgt 31395467  T
Q  107 tgctagcattcctc 120  Q
    |||||||| |||||    
T  31395466 tgctagcactcctc 31395453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 30; E-Value: 0.00000004
Query Start/End: Original strand, 8 - 97
Target Start/End: Original strand, 43414414 - 43414503
Alignment:
Q  8 aaatcaatgtatgtcccaccattttgtgggggttcagttttcaaagtgtagacccacaatgatttaaaccaataagagattgagtattag 97  Q
    |||||||||||||| | ||||||||| |   || |  |||||| ||| |||| ||||||||||||||||||| |||||  ||||||||||    
T  43414414 aaatcaatgtatgttctaccattttgcgtaagtgctattttcagagtatagatccacaatgatttaaaccaagaagagggtgagtattag 43414503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 29; E-Value: 0.0000002
Query Start/End: Original strand, 8 - 84
Target Start/End: Original strand, 30849296 - 30849372
Alignment:
Q  8 aaatcaatgtatgtcccaccattttgtgggggttcagttttcaaagtgtagacccacaatgatttaaaccaataaga 84  Q
    ||||||||||| ||||||||| |||||  ||||||  |||| ||||  || | ||||||||||||||| ||||||||    
T  30849296 aaatcaatgtacgtcccaccaatttgtatgggttctatttttaaaggataaatccacaatgatttaaatcaataaga 30849372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 29; E-Value: 0.0000002
Query Start/End: Original strand, 7 - 55
Target Start/End: Original strand, 37228557 - 37228605
Alignment:
Q  7 aaaatcaatgtatgtcccaccattttgtgggggttcagttttcaaagtg 55  Q
    ||||| |||||||||||||||| ||| || |||||| ||||||||||||    
T  37228557 aaaattaatgtatgtcccaccactttatgtgggttccgttttcaaagtg 37228605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 28; E-Value: 0.0000006
Query Start/End: Original strand, 7 - 82
Target Start/End: Original strand, 32701528 - 32701603
Alignment:
Q  7 aaaatcaatgtatgtcccaccattttgtgggggttcagttttcaaagtgtagacccacaatgatttaaaccaataa 82  Q
    ||||||||||||| |||||||| ||| ||   ||||| |||| || ||||| | ||| ||||||||||||||||||    
T  32701528 aaaatcaatgtatatcccaccactttatgtatgttcaatttttaacgtgtaaatccataatgatttaaaccaataa 32701603  T

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Target: chr2; HSP #38
Raw Score: 28; E-Value: 0.0000006
Query Start/End: Original strand, 7 - 82
Target Start/End: Complemental strand, 45270678 - 45270603
Alignment:
Q  7 aaaatcaatgtatgtcccaccattttgtgggggttcagttttcaaagtgtagacccacaatgatttaaaccaataa 82  Q
    ||||| |||||||||  ||| |||||||| |  |||  |||| |||||||| || |||||||||||||||||||||    
T  45270678 aaaattaatgtatgtatcactattttgtgtgaattcgattttgaaagtgtaaactcacaatgatttaaaccaataa 45270603  T

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Target: scaffold0543 (Bit Score: 55; Significance: 5e-23; HSPs: 2)
Name: scaffold0543
Description:

Target: scaffold0543; HSP #1
Raw Score: 55; E-Value: 5e-23
Query Start/End: Original strand, 8 - 90
Target Start/End: Original strand, 9723 - 9805
Alignment:
Q  8 aaatcaatgtatgtcccaccattttgtgggggttcagttttcaaagtgtagacccacaatgatttaaaccaataagagattga 90  Q
    |||||||||||| ||||||||||||||| ||||||| |||| ||||||||||| |||||| |||||||| |||||||||||||    
T  9723 aaatcaatgtatatcccaccattttgtgtgggttcaattttaaaagtgtagactcacaataatttaaacgaataagagattga 9805  T

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Target: scaffold0543; HSP #2
Raw Score: 32; E-Value: 0.000000002
Query Start/End: Original strand, 67 - 122
Target Start/End: Complemental strand, 9728 - 9673
Alignment:
Q  67 tgatttaaaccaataagagattgagtattagagagagtgttgctagcattcctctt 122  Q
    |||||| | ||||||| | | ||||| |||||||||||||||||||||||||||||    
T  9728 tgatttcatccaataaaaaagtgagtgttagagagagtgttgctagcattcctctt 9673  T

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Target: scaffold0492 (Bit Score: 55; Significance: 5e-23; HSPs: 2)
Name: scaffold0492
Description:

Target: scaffold0492; HSP #1
Raw Score: 55; E-Value: 5e-23
Query Start/End: Original strand, 8 - 90
Target Start/End: Original strand, 11269 - 11351
Alignment:
Q  8 aaatcaatgtatgtcccaccattttgtgggggttcagttttcaaagtgtagacccacaatgatttaaaccaataagagattga 90  Q
    |||||||||||| ||||||||||||||| ||||||| |||| ||||||||||| |||||| |||||||| |||||||||||||    
T  11269 aaatcaatgtatatcccaccattttgtgtgggttcaattttaaaagtgtagactcacaataatttaaacgaataagagattga 11351  T

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Target: scaffold0492; HSP #2
Raw Score: 32; E-Value: 0.000000002
Query Start/End: Original strand, 67 - 122
Target Start/End: Complemental strand, 11274 - 11219
Alignment:
Q  67 tgatttaaaccaataagagattgagtattagagagagtgttgctagcattcctctt 122  Q
    |||||| | ||||||| | | ||||| |||||||||||||||||||||||||||||    
T  11274 tgatttcatccaataaaaaagtgagtgttagagagagtgttgctagcattcctctt 11219  T

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Target: scaffold0204 (Bit Score: 47; Significance: 3e-18; HSPs: 1)
Name: scaffold0204
Description:

Target: scaffold0204; HSP #1
Raw Score: 47; E-Value: 3e-18
Query Start/End: Original strand, 8 - 82
Target Start/End: Complemental strand, 26983 - 26909
Alignment:
Q  8 aaatcaatgtatgtcccaccattttgtgggggttcagttttcaaagtgtagacccacaatgatttaaaccaataa 82  Q
    |||||||||||||| |||||| |||||| ||||||| ||||||||| ||||||||| |||| |||||||||||||    
T  26983 aaatcaatgtatgttccaccactttgtgtgggttcaattttcaaagcgtagacccataatgctttaaaccaataa 26909  T

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Target: scaffold0194 (Bit Score: 31; Significance: 0.00000001; HSPs: 1)
Name: scaffold0194
Description:

Target: scaffold0194; HSP #1
Raw Score: 31; E-Value: 0.00000001
Query Start/End: Original strand, 46 - 104
Target Start/End: Complemental strand, 8494 - 8436
Alignment:
Q  46 tttcaaagtgtagacccacaatgatttaaaccaataagagattgagtattagagagagt 104  Q
    |||| |||||||||| || |||||||||||||||||| ||| | ||||||| |||||||    
T  8494 tttcgaagtgtagactcataatgatttaaaccaataaaagaattagtattaaagagagt 8436  T

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