View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: Solexa-NF5876-9 (Length: 155)

Name: Solexa-NF5876-9
Description: NF5876
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] Solexa-NF5876-9
Solexa-NF5876-9
[»] chr2 (23 HSPs)
chr2 (9-154)||(1188602-1188746)
chr2 (83-154)||(20156343-20156414)
chr2 (84-154)||(34027517-34027587)
chr2 (80-152)||(44766484-44766556)
chr2 (88-154)||(17881547-17881612)
chr2 (82-150)||(32125878-32125946)
chr2 (83-150)||(20605532-20605599)
chr2 (84-150)||(12407977-12408043)
chr2 (84-150)||(12420037-12420103)
chr2 (80-150)||(22551370-22551440)
chr2 (80-150)||(37982574-37982643)
chr2 (82-111)||(10658497-10658526)
chr2 (83-111)||(214624-214652)
chr2 (83-111)||(379977-380005)
chr2 (83-111)||(18178339-18178367)
chr2 (82-150)||(24776906-24776974)
chr2 (83-111)||(25289222-25289250)
chr2 (83-111)||(26789852-26789880)
chr2 (83-111)||(33136664-33136692)
chr2 (80-111)||(2289343-2289374)
chr2 (83-150)||(21136588-21136655)
chr2 (84-111)||(28845645-28845672)
chr2 (83-122)||(35317747-35317786)
[»] chr1 (25 HSPs)
chr1 (83-154)||(1923095-1923166)
chr1 (90-150)||(42658617-42658677)
chr1 (74-122)||(49197751-49197799)
chr1 (85-150)||(50192072-50192137)
chr1 (79-111)||(15835383-15835415)
chr1 (83-150)||(6303774-6303841)
chr1 (80-111)||(29395534-29395565)
chr1 (83-150)||(35280298-35280365)
chr1 (83-130)||(45759457-45759504)
chr1 (80-111)||(46329035-46329066)
chr1 (83-150)||(47784811-47784878)
chr1 (77-150)||(956100-956174)
chr1 (82-120)||(47781317-47781355)
chr1 (85-150)||(32588244-32588308)
chr1 (83-111)||(6313643-6313671)
chr1 (83-111)||(25613159-25613187)
chr1 (83-111)||(28386557-28386585)
chr1 (83-111)||(48199014-48199042)
chr1 (83-111)||(48207597-48207625)
chr1 (84-111)||(18799416-18799443)
chr1 (84-127)||(19350299-19350342)
chr1 (83-150)||(19451280-19451347)
chr1 (84-111)||(48176646-48176673)
chr1 (84-111)||(49232051-49232078)
chr1 (80-111)||(51702661-51702692)
[»] chr4 (25 HSPs)
chr4 (82-154)||(28099682-28099754)
chr4 (85-150)||(7007899-7007964)
chr4 (85-150)||(41321300-41321365)
chr4 (79-111)||(32683130-32683162)
chr4 (83-150)||(24130460-24130527)
chr4 (83-150)||(37369431-37369497)
chr4 (79-110)||(51321935-51321966)
chr4 (85-150)||(23465507-23465573)
chr4 (84-150)||(25446683-25446749)
chr4 (82-111)||(5105009-5105038)
chr4 (74-111)||(16019915-16019952)
chr4 (81-150)||(34228157-34228226)
chr4 (85-150)||(55975168-55975233)
chr4 (90-150)||(1848393-1848453)
chr4 (86-150)||(3437140-3437204)
chr4 (83-111)||(5442458-5442486)
chr4 (83-111)||(27769131-27769159)
chr4 (83-111)||(38234670-38234698)
chr4 (83-111)||(48262142-48262170)
chr4 (83-111)||(54852660-54852688)
chr4 (80-111)||(21309036-21309067)
chr4 (83-122)||(22202703-22202742)
chr4 (84-111)||(23988264-23988291)
chr4 (79-150)||(42721977-42722047)
chr4 (80-111)||(54342214-54342245)
[»] scaffold0287 (1 HSPs)
scaffold0287 (84-154)||(10863-10933)
[»] chr7 (21 HSPs)
chr7 (84-154)||(3635152-3635222)
chr7 (82-154)||(40098502-40098573)
chr7 (79-150)||(12893988-12894059)
chr7 (83-150)||(47879732-47879799)
chr7 (83-150)||(47914810-47914877)
chr7 (78-111)||(3023991-3024024)
chr7 (85-150)||(34695899-34695964)
chr7 (80-111)||(33383671-33383702)
chr7 (80-111)||(33891380-33891411)
chr7 (83-150)||(44343000-44343067)
chr7 (82-111)||(21068425-21068454)
chr7 (83-111)||(9881400-9881428)
chr7 (83-111)||(23102358-23102386)
chr7 (83-111)||(26183124-26183152)
chr7 (83-111)||(39785165-39785193)
chr7 (87-122)||(835094-835129)
chr7 (87-122)||(1200274-1200309)
chr7 (84-111)||(18839361-18839388)
chr7 (84-111)||(29894024-29894051)
chr7 (84-111)||(39029120-39029147)
chr7 (87-122)||(46121680-46121715)
[»] chr3 (20 HSPs)
chr3 (80-154)||(46749995-46750068)
chr3 (85-150)||(10138725-10138790)
chr3 (83-150)||(7319109-7319175)
chr3 (77-111)||(17947287-17947321)
chr3 (82-150)||(44761616-44761684)
chr3 (83-150)||(995482-995549)
chr3 (83-150)||(3999147-3999214)
chr3 (80-111)||(10728121-10728152)
chr3 (82-111)||(11432614-11432643)
chr3 (85-150)||(25418988-25419053)
chr3 (82-111)||(26108497-26108526)
chr3 (85-150)||(35338312-35338377)
chr3 (83-111)||(27239326-27239354)
chr3 (83-111)||(36673259-36673287)
chr3 (83-111)||(52617086-52617114)
chr3 (83-150)||(16008097-16008164)
chr3 (80-111)||(24573429-24573460)
chr3 (80-111)||(31645360-31645391)
chr3 (78-109)||(39842112-39842143)
chr3 (84-111)||(54629920-54629947)
[»] chr6 (12 HSPs)
chr6 (83-154)||(30878814-30878885)
chr6 (79-150)||(23929343-23929414)
chr6 (78-150)||(2300143-2300215)
chr6 (83-150)||(6196939-6197006)
chr6 (79-122)||(10344921-10344964)
chr6 (81-111)||(7498167-7498197)
chr6 (82-110)||(4199585-4199613)
chr6 (83-111)||(7104591-7104619)
chr6 (83-111)||(8790011-8790039)
chr6 (83-111)||(30384171-30384199)
chr6 (83-111)||(31068487-31068515)
chr6 (83-111)||(31896704-31896732)
[»] chr5 (16 HSPs)
chr5 (90-150)||(2004499-2004559)
chr5 (83-152)||(21147758-21147827)
chr5 (75-155)||(30581984-30582064)
chr5 (75-111)||(2275261-2275297)
chr5 (79-122)||(849932-849975)
chr5 (80-111)||(4239576-4239607)
chr5 (83-150)||(43319227-43319294)
chr5 (87-152)||(9688372-9688437)
chr5 (85-150)||(27458680-27458745)
chr5 (83-111)||(13999213-13999241)
chr5 (83-111)||(28592999-28593027)
chr5 (83-111)||(40012816-40012844)
chr5 (80-111)||(4549360-4549391)
chr5 (83-122)||(5272437-5272476)
chr5 (84-111)||(13717162-13717189)
chr5 (84-111)||(13927000-13927027)
[»] chr8 (17 HSPs)
chr8 (79-150)||(33850974-33851045)
chr8 (81-150)||(5576131-5576200)
chr8 (85-150)||(7506439-7506504)
chr8 (85-150)||(37915547-37915612)
chr8 (83-150)||(42734814-42734881)
chr8 (86-152)||(24501324-24501390)
chr8 (82-111)||(18957832-18957861)
chr8 (82-111)||(32498958-32498987)
chr8 (85-150)||(32711129-32711194)
chr8 (82-111)||(34893425-34893454)
chr8 (85-150)||(42936794-42936859)
chr8 (83-111)||(14781247-14781275)
chr8 (83-111)||(18305076-18305104)
chr8 (83-150)||(10391693-10391760)
chr8 (80-111)||(20831076-20831107)
chr8 (84-111)||(37857944-37857971)
chr8 (83-150)||(42938026-42938093)
[»] scaffold0940 (1 HSPs)
scaffold0940 (79-111)||(3569-3601)
[»] scaffold0492 (1 HSPs)
scaffold0492 (79-111)||(12103-12135)
[»] scaffold0110 (1 HSPs)
scaffold0110 (82-111)||(38748-38777)


Alignment Details
Target: chr2 (Bit Score: 122; Significance: 6e-63; HSPs: 23)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 122; E-Value: 6e-63
Query Start/End: Original strand, 9 - 154
Target Start/End: Original strand, 1188602 - 1188746
Alignment:
Q  9 atttaatatccctaaaagaaaaattgacatttaatatctttatttatttaccagcaatagttataaaaatctaagggggtgtattggattaggattttaa 108  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||    
T  1188602 atttaatatccctaaaagaaaaattgacatttaatatctttatttatttaccaacaata-ttataaaaatctaagggggtgtattggattaggattttaa 1188700  T
Q  109 aaggaaatttttgtatgaaaaattctaatggattttaaaagattat 154  Q
    ||| |||||||||||||||||| ||||||| |||||||||||||||    
T  1188701 aagaaaatttttgtatgaaaaagtctaatgaattttaaaagattat 1188746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 48; E-Value: 9e-19
Query Start/End: Original strand, 83 - 154
Target Start/End: Original strand, 20156343 - 20156414
Alignment:
Q  83 gggggtgtattggattaggattttaaaaggaaatttttgtatgaaaaattctaatggattttaaaagattat 154  Q
    |||||||||||||||||||||||||||||   |||||||||||||||| |||| | ||||||||||||||||    
T  20156343 gggggtgtattggattaggattttaaaagactatttttgtatgaaaaagtctagtagattttaaaagattat 20156414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 43; E-Value: 9e-16
Query Start/End: Original strand, 84 - 154
Target Start/End: Original strand, 34027517 - 34027587
Alignment:
Q  84 ggggtgtattggattaggattttaaaaggaaatttttgtatgaaaaattctaatggattttaaaagattat 154  Q
    |||||||||| |||||||||||||||||   |||||||||||||||| |||| || |||||||||||||||    
T  34027517 ggggtgtatttgattaggattttaaaagattatttttgtatgaaaaaatctagtgaattttaaaagattat 34027587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 37; E-Value: 0.000000000003
Query Start/End: Original strand, 80 - 152
Target Start/End: Complemental strand, 44766556 - 44766484
Alignment:
Q  80 taagggggtgtattggattaggattttaaaaggaaatttttgtatgaaaaattctaatggattttaaaagatt 152  Q
    ||||||||||||||| ||||||||||||||||  ||||||||| | ||||| |||   |||||||||||||||    
T  44766556 taagggggtgtattgaattaggattttaaaagacaatttttgtttaaaaaagtcttgaggattttaaaagatt 44766484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 35; E-Value: 0.00000000005
Query Start/End: Original strand, 88 - 154
Target Start/End: Original strand, 17881547 - 17881612
Alignment:
Q  88 tgtattggattaggattttaaaaggaaatttttgtatgaaaaattctaatggattttaaaagattat 154  Q
    ||||||||||||||||||||||||   ||||||| |||||||| |||| || |||||||||||||||    
T  17881547 tgtattggattaggattttaaaagatcatttttg-atgaaaaagtctagtgtattttaaaagattat 17881612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 33; E-Value: 0.0000000008
Query Start/End: Original strand, 82 - 150
Target Start/End: Complemental strand, 32125946 - 32125878
Alignment:
Q  82 agggggtgtattggattaggattttaaaaggaaatttttgtatgaaaaattctaatggattttaaaaga 150  Q
    |||||||||||||||||||||||||||| |  ||||||||| | ||||| |||   |||||||||||||    
T  32125946 agggggtgtattggattaggattttaaaggataatttttgtttaaaaaagtcttgaggattttaaaaga 32125878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 32; E-Value: 0.000000003
Query Start/End: Original strand, 83 - 150
Target Start/End: Complemental strand, 20605599 - 20605532
Alignment:
Q  83 gggggtgtattggattaggattttaaaaggaaatttttgtatgaaaaattctaatggattttaaaaga 150  Q
    ||||||||||||||||||||||||||| |  ||||||||| | ||||| |||   |||||||||||||    
T  20605599 gggggtgtattggattaggattttaaaggataatttttgtttaaaaaagtcttgaggattttaaaaga 20605532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 31; E-Value: 0.00000001
Query Start/End: Original strand, 84 - 150
Target Start/End: Complemental strand, 12408043 - 12407977
Alignment:
Q  84 ggggtgtattggattaggattttaaaaggaaatttttgtatgaaaaattctaatggattttaaaaga 150  Q
    |||||||||||||||||||||||||| |  ||||||||| | ||||| |||   |||||||||||||    
T  12408043 ggggtgtattggattaggattttaaaggataatttttgtttaaaaaagtcttgaggattttaaaaga 12407977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 31; E-Value: 0.00000001
Query Start/End: Original strand, 84 - 150
Target Start/End: Complemental strand, 12420103 - 12420037
Alignment:
Q  84 ggggtgtattggattaggattttaaaaggaaatttttgtatgaaaaattctaatggattttaaaaga 150  Q
    |||||||||||||||||||||||||| |  ||||||||| | ||||| |||   |||||||||||||    
T  12420103 ggggtgtattggattaggattttaaaggataatttttgtttaaaaaagtcttgaggattttaaaaga 12420037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 31; E-Value: 0.00000001
Query Start/End: Original strand, 80 - 150
Target Start/End: Original strand, 22551370 - 22551440
Alignment:
Q  80 taagggggtgtattggattaggattttaaaaggaaatttttgtatgaaaaattctaatggattttaaaaga 150  Q
    |||||||||||||||||||| ||||||||| |  ||||||||| | ||||| |||   |||||||||||||    
T  22551370 taagggggtgtattggattaagattttaaaggacaatttttgtttaaaaaagtcttgaggattttaaaaga 22551440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 31; E-Value: 0.00000001
Query Start/End: Original strand, 80 - 150
Target Start/End: Complemental strand, 37982643 - 37982574
Alignment:
Q  80 taagggggtgtattggattaggattttaaaaggaaatttttgtatgaaaaattctaatggattttaaaaga 150  Q
    |||| ||| |||||| ||||||||||||||||  |||||||  |||||||| |||| ||||||||||||||    
T  37982643 taagagggggtattgaattaggattttaaaagacaattttt-catgaaaaagtctagtggattttaaaaga 37982574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 30; E-Value: 0.00000005
Query Start/End: Original strand, 82 - 111
Target Start/End: Complemental strand, 10658526 - 10658497
Alignment:
Q  82 agggggtgtattggattaggattttaaaag 111  Q
    ||||||||||||||||||||||||||||||    
T  10658526 agggggtgtattggattaggattttaaaag 10658497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 29; E-Value: 0.0000002
Query Start/End: Original strand, 83 - 111
Target Start/End: Original strand, 214624 - 214652
Alignment:
Q  83 gggggtgtattggattaggattttaaaag 111  Q
    |||||||||||||||||||||||||||||    
T  214624 gggggtgtattggattaggattttaaaag 214652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 29; E-Value: 0.0000002
Query Start/End: Original strand, 83 - 111
Target Start/End: Complemental strand, 380005 - 379977
Alignment:
Q  83 gggggtgtattggattaggattttaaaag 111  Q
    |||||||||||||||||||||||||||||    
T  380005 gggggtgtattggattaggattttaaaag 379977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 29; E-Value: 0.0000002
Query Start/End: Original strand, 83 - 111
Target Start/End: Complemental strand, 18178367 - 18178339
Alignment:
Q  83 gggggtgtattggattaggattttaaaag 111  Q
    |||||||||||||||||||||||||||||    
T  18178367 gggggtgtattggattaggattttaaaag 18178339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 29; E-Value: 0.0000002
Query Start/End: Original strand, 82 - 150
Target Start/End: Complemental strand, 24776974 - 24776906
Alignment:
Q  82 agggggtgtattggattaggattttaaaaggaaatttttgtatgaaaaattctaatggattttaaaaga 150  Q
    |||||||||||||||||||||||||||| |  ||||||| | | ||||| |||   |||||||||||||    
T  24776974 agggggtgtattggattaggattttaaaggacaatttttctttaaaaaagtcttgaggattttaaaaga 24776906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 29; E-Value: 0.0000002
Query Start/End: Original strand, 83 - 111
Target Start/End: Complemental strand, 25289250 - 25289222
Alignment:
Q  83 gggggtgtattggattaggattttaaaag 111  Q
    |||||||||||||||||||||||||||||    
T  25289250 gggggtgtattggattaggattttaaaag 25289222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 29; E-Value: 0.0000002
Query Start/End: Original strand, 83 - 111
Target Start/End: Complemental strand, 26789880 - 26789852
Alignment:
Q  83 gggggtgtattggattaggattttaaaag 111  Q
    |||||||||||||||||||||||||||||    
T  26789880 gggggtgtattggattaggattttaaaag 26789852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 29; E-Value: 0.0000002
Query Start/End: Original strand, 83 - 111
Target Start/End: Complemental strand, 33136692 - 33136664
Alignment:
Q  83 gggggtgtattggattaggattttaaaag 111  Q
    |||||||||||||||||||||||||||||    
T  33136692 gggggtgtattggattaggattttaaaag 33136664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 28; E-Value: 0.0000008
Query Start/End: Original strand, 80 - 111
Target Start/End: Complemental strand, 2289374 - 2289343
Alignment:
Q  80 taagggggtgtattggattaggattttaaaag 111  Q
    ||||||||||||||||||| ||||||||||||    
T  2289374 taagggggtgtattggattgggattttaaaag 2289343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 28; E-Value: 0.0000008
Query Start/End: Original strand, 83 - 150
Target Start/End: Original strand, 21136588 - 21136655
Alignment:
Q  83 gggggtgtattggattaggattttaaaaggaaatttttgtatgaaaaattctaatggattttaaaaga 150  Q
    |||||||| |||||||||||||||||| |  ||||||||| | ||||| |||   |||||||||||||    
T  21136588 gggggtgttttggattaggattttaaaggataatttttgtttaaaaaagtcttgaggattttaaaaga 21136655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 28; E-Value: 0.0000008
Query Start/End: Original strand, 84 - 111
Target Start/End: Complemental strand, 28845672 - 28845645
Alignment:
Q  84 ggggtgtattggattaggattttaaaag 111  Q
    ||||||||||||||||||||||||||||    
T  28845672 ggggtgtattggattaggattttaaaag 28845645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 28; E-Value: 0.0000008
Query Start/End: Original strand, 83 - 122
Target Start/End: Complemental strand, 35317786 - 35317747
Alignment:
Q  83 gggggtgtattggattaggattttaaaaggaaatttttgt 122  Q
    ||||||||||||||||||||||||||| |  |||||||||    
T  35317786 gggggtgtattggattaggattttaaaggacaatttttgt 35317747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 52; Significance: 4e-21; HSPs: 25)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 52; E-Value: 4e-21
Query Start/End: Original strand, 83 - 154
Target Start/End: Original strand, 1923095 - 1923166
Alignment:
Q  83 gggggtgtattggattaggattttaaaaggaaatttttgtatgaaaaattctaatggattttaaaagattat 154  Q
    |||||||||||||||||||||||||||||   |||||||||||||||| |||| ||||||||||||||||||    
T  1923095 gggggtgtattggattaggattttaaaagactatttttgtatgaaaaagtctagtggattttaaaagattat 1923166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 41; E-Value: 0.00000000000001
Query Start/End: Original strand, 90 - 150
Target Start/End: Complemental strand, 42658677 - 42658617
Alignment:
Q  90 tattggattaggattttaaaaggaaatttttgtatgaaaaattctaatggattttaaaaga 150  Q
    ||||||||||||||||||||||  |||||||| |||||||| |||| ||||||||||||||    
T  42658677 tattggattaggattttaaaagacaatttttgcatgaaaaagtctagtggattttaaaaga 42658617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 37; E-Value: 0.000000000003
Query Start/End: Original strand, 74 - 122
Target Start/End: Original strand, 49197751 - 49197799
Alignment:
Q  74 aaaatctaagggggtgtattggattaggattttaaaaggaaatttttgt 122  Q
    |||| |||||||||||||||||||||||||||||||||  |||||||||    
T  49197751 aaaagctaagggggtgtattggattaggattttaaaagacaatttttgt 49197799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 34; E-Value: 0.0000000002
Query Start/End: Original strand, 85 - 150
Target Start/End: Original strand, 50192072 - 50192137
Alignment:
Q  85 gggtgtattggattaggattttaaaaggaaatttttgtatgaaaaattctaatggattttaaaaga 150  Q
    ||||||||||||||||||||||||| |  ||||||||| | ||||| ||| | |||||||||||||    
T  50192072 gggtgtattggattaggattttaaaggacaatttttgtttaaaaaagtcttaaggattttaaaaga 50192137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 33; E-Value: 0.0000000008
Query Start/End: Original strand, 79 - 111
Target Start/End: Complemental strand, 15835415 - 15835383
Alignment:
Q  79 ctaagggggtgtattggattaggattttaaaag 111  Q
    |||||||||||||||||||||||||||||||||    
T  15835415 ctaagggggtgtattggattaggattttaaaag 15835383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 32; E-Value: 0.000000003
Query Start/End: Original strand, 83 - 150
Target Start/End: Original strand, 6303774 - 6303841
Alignment:
Q  83 gggggtgtattggattaggattttaaaaggaaatttttgtatgaaaaattctaatggattttaaaaga 150  Q
    ||||||||||||||||||||||||||| |  ||||||||| | ||||| |||   |||||||||||||    
T  6303774 gggggtgtattggattaggattttaaaggacaatttttgtttaaaaaagtcttgaggattttaaaaga 6303841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 32; E-Value: 0.000000003
Query Start/End: Original strand, 80 - 111
Target Start/End: Original strand, 29395534 - 29395565
Alignment:
Q  80 taagggggtgtattggattaggattttaaaag 111  Q
    ||||||||||||||||||||||||||||||||    
T  29395534 taagggggtgtattggattaggattttaaaag 29395565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 32; E-Value: 0.000000003
Query Start/End: Original strand, 83 - 150
Target Start/End: Complemental strand, 35280365 - 35280298
Alignment:
Q  83 gggggtgtattggattaggattttaaaaggaaatttttgtatgaaaaattctaatggattttaaaaga 150  Q
    ||||||||||||||||||||||||||| |  ||||||||| | ||||| |||   |||||||||||||    
T  35280365 gggggtgtattggattaggattttaaaggacaatttttgtttaaaaaagtcttgaggattttaaaaga 35280298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 32; E-Value: 0.000000003
Query Start/End: Original strand, 83 - 130
Target Start/End: Original strand, 45759457 - 45759504
Alignment:
Q  83 gggggtgtattggattaggattttaaaaggaaatttttgtatgaaaaa 130  Q
    ||||||||||||||||||||||||||| |  ||||||||| |||||||    
T  45759457 gggggtgtattggattaggattttaaaggacaatttttgtttgaaaaa 45759504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 32; E-Value: 0.000000003
Query Start/End: Original strand, 80 - 111
Target Start/End: Complemental strand, 46329066 - 46329035
Alignment:
Q  80 taagggggtgtattggattaggattttaaaag 111  Q
    ||||||||||||||||||||||||||||||||    
T  46329066 taagggggtgtattggattaggattttaaaag 46329035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 32; E-Value: 0.000000003
Query Start/End: Original strand, 83 - 150
Target Start/End: Complemental strand, 47784878 - 47784811
Alignment:
Q  83 gggggtgtattggattaggattttaaaaggaaatttttgtatgaaaaattctaatggattttaaaaga 150  Q
    ||||||||||||||  ||||||||||| |  ||||||||| | ||||| ||| |||||||||||||||    
T  47784878 gggggtgtattggaccaggattttaaaggacaatttttgtttaaaaaagtcttatggattttaaaaga 47784811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 31; E-Value: 0.00000001
Query Start/End: Original strand, 77 - 150
Target Start/End: Complemental strand, 956174 - 956100
Alignment:
Q  77 atctaagg-gggtgtattggattaggattttaaaaggaaatttttgtatgaaaaattctaatggattttaaaaga 150  Q
    |||||||| |||||||||||||||| ||||||||||  ||||||||| | ||||| |||   |||||||||||||    
T  956174 atctaaggagggtgtattggattagaattttaaaagacaatttttgtttaaaaaagtcttgaggattttaaaaga 956100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 31; E-Value: 0.00000001
Query Start/End: Original strand, 82 - 120
Target Start/End: Complemental strand, 47781355 - 47781317
Alignment:
Q  82 agggggtgtattggattaggattttaaaaggaaattttt 120  Q
    ||||||||||||||||||||||||||||||  |||||||    
T  47781355 agggggtgtattggattaggattttaaaagataattttt 47781317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 30; E-Value: 0.00000005
Query Start/End: Original strand, 85 - 150
Target Start/End: Original strand, 32588244 - 32588308
Alignment:
Q  85 gggtgtattggattaggattttaaaaggaaatttttgtatgaaaaattctaatggattttaaaaga 150  Q
    ||||||||||||||||||| |||||||  ||||||||| | ||||| ||| | |||||||||||||    
T  32588244 gggtgtattggattaggatcttaaaagataatttttgtttaaaaaagtctta-ggattttaaaaga 32588308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 29; E-Value: 0.0000002
Query Start/End: Original strand, 83 - 111
Target Start/End: Complemental strand, 6313671 - 6313643
Alignment:
Q  83 gggggtgtattggattaggattttaaaag 111  Q
    |||||||||||||||||||||||||||||    
T  6313671 gggggtgtattggattaggattttaaaag 6313643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 29; E-Value: 0.0000002
Query Start/End: Original strand, 83 - 111
Target Start/End: Complemental strand, 25613187 - 25613159
Alignment:
Q  83 gggggtgtattggattaggattttaaaag 111  Q
    |||||||||||||||||||||||||||||    
T  25613187 gggggtgtattggattaggattttaaaag 25613159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 29; E-Value: 0.0000002
Query Start/End: Original strand, 83 - 111
Target Start/End: Original strand, 28386557 - 28386585
Alignment:
Q  83 gggggtgtattggattaggattttaaaag 111  Q
    |||||||||||||||||||||||||||||    
T  28386557 gggggtgtattggattaggattttaaaag 28386585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 29; E-Value: 0.0000002
Query Start/End: Original strand, 83 - 111
Target Start/End: Complemental strand, 48199042 - 48199014
Alignment:
Q  83 gggggtgtattggattaggattttaaaag 111  Q
    |||||||||||||||||||||||||||||    
T  48199042 gggggtgtattggattaggattttaaaag 48199014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 29; E-Value: 0.0000002
Query Start/End: Original strand, 83 - 111
Target Start/End: Complemental strand, 48207625 - 48207597
Alignment:
Q  83 gggggtgtattggattaggattttaaaag 111  Q
    |||||||||||||||||||||||||||||    
T  48207625 gggggtgtattggattaggattttaaaag 48207597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 28; E-Value: 0.0000008
Query Start/End: Original strand, 84 - 111
Target Start/End: Complemental strand, 18799443 - 18799416
Alignment:
Q  84 ggggtgtattggattaggattttaaaag 111  Q
    ||||||||||||||||||||||||||||    
T  18799443 ggggtgtattggattaggattttaaaag 18799416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 28; E-Value: 0.0000008
Query Start/End: Original strand, 84 - 127
Target Start/End: Complemental strand, 19350342 - 19350299
Alignment:
Q  84 ggggtgtattggattaggattttaaaaggaaatttttgtatgaa 127  Q
    |||||||||| ||||||||||||||||| || |||||| |||||    
T  19350342 ggggtgtattagattaggattttaaaagaaattttttgcatgaa 19350299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 28; E-Value: 0.0000008
Query Start/End: Original strand, 83 - 150
Target Start/End: Original strand, 19451280 - 19451347
Alignment:
Q  83 gggggtgtattggattaggattttaaaaggaaatttttgtatgaaaaattctaatggattttaaaaga 150  Q
    ||||||||||||||||| ||||||||| |  ||||||||| | ||||| |||   |||||||||||||    
T  19451280 gggggtgtattggattatgattttaaaggataatttttgtttaaaaaagtcttgaggattttaaaaga 19451347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 28; E-Value: 0.0000008
Query Start/End: Original strand, 84 - 111
Target Start/End: Original strand, 48176646 - 48176673
Alignment:
Q  84 ggggtgtattggattaggattttaaaag 111  Q
    ||||||||||||||||||||||||||||    
T  48176646 ggggtgtattggattaggattttaaaag 48176673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 28; E-Value: 0.0000008
Query Start/End: Original strand, 84 - 111
Target Start/End: Complemental strand, 49232078 - 49232051
Alignment:
Q  84 ggggtgtattggattaggattttaaaag 111  Q
    ||||||||||||||||||||||||||||    
T  49232078 ggggtgtattggattaggattttaaaag 49232051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 28; E-Value: 0.0000008
Query Start/End: Original strand, 80 - 111
Target Start/End: Complemental strand, 51702692 - 51702661
Alignment:
Q  80 taagggggtgtattggattaggattttaaaag 111  Q
    ||||||||||||| ||||||||||||||||||    
T  51702692 taagggggtgtataggattaggattttaaaag 51702661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 49; Significance: 2e-19; HSPs: 25)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 49; E-Value: 2e-19
Query Start/End: Original strand, 82 - 154
Target Start/End: Original strand, 28099682 - 28099754
Alignment:
Q  82 agggggtgtattggattaggattttaaaaggaaatttttgtatgaaaaattctaatggattttaaaagattat 154  Q
    ||||||||||||| ||||||||||||||||  ||||||||||||||||| ||||||  |||||||||||||||    
T  28099682 agggggtgtattgaattaggattttaaaagacaatttttgtatgaaaaagtctaataaattttaaaagattat 28099754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 34; E-Value: 0.0000000002
Query Start/End: Original strand, 85 - 150
Target Start/End: Complemental strand, 7007964 - 7007899
Alignment:
Q  85 gggtgtattggattaggattttaaaaggaaatttttgtatgaaaaattctaatggattttaaaaga 150  Q
    |||||||||||||||||||||||||||  ||||||||| | ||||| |||   |||||||||||||    
T  7007964 gggtgtattggattaggattttaaaagataatttttgtttaaaaaagtcttgaggattttaaaaga 7007899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 34; E-Value: 0.0000000002
Query Start/End: Original strand, 85 - 150
Target Start/End: Complemental strand, 41321365 - 41321300
Alignment:
Q  85 gggtgtattggattaggattttaaaaggaaatttttgtatgaaaaattctaatggattttaaaaga 150  Q
    |||||||||||||||||||||||||||   |||||||| | ||||| ||| | |||||||||||||    
T  41321365 gggtgtattggattaggattttaaaagatgatttttgtttaaaaaagtcttaaggattttaaaaga 41321300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 33; E-Value: 0.0000000008
Query Start/End: Original strand, 79 - 111
Target Start/End: Original strand, 32683130 - 32683162
Alignment:
Q  79 ctaagggggtgtattggattaggattttaaaag 111  Q
    |||||||||||||||||||||||||||||||||    
T  32683130 ctaagggggtgtattggattaggattttaaaag 32683162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 32; E-Value: 0.000000003
Query Start/End: Original strand, 83 - 150
Target Start/End: Original strand, 24130460 - 24130527
Alignment:
Q  83 gggggtgtattggattaggattttaaaaggaaatttttgtatgaaaaattctaatggattttaaaaga 150  Q
    ||||||||||||||||||||||||||| |  ||||||||| | ||||| |||   |||||||||||||    
T  24130460 gggggtgtattggattaggattttaaaggacaatttttgtttaaaaaagtcttgaggattttaaaaga 24130527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 32; E-Value: 0.000000003
Query Start/End: Original strand, 83 - 150
Target Start/End: Original strand, 37369431 - 37369497
Alignment:
Q  83 gggggtgtattggattaggattttaaaaggaaatttttgtatgaaaaattctaatggattttaaaaga 150  Q
    ||||||||||||||||||||||||||||  | | ||||  |||||||| |||| ||||||||||||||    
T  37369431 gggggtgtattggattaggattttaaaa-aacaattttacatgaaaaagtctagtggattttaaaaga 37369497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 32; E-Value: 0.000000003
Query Start/End: Original strand, 79 - 110
Target Start/End: Complemental strand, 51321966 - 51321935
Alignment:
Q  79 ctaagggggtgtattggattaggattttaaaa 110  Q
    ||||||||||||||||||||||||||||||||    
T  51321966 ctaagggggtgtattggattaggattttaaaa 51321935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 31; E-Value: 0.00000001
Query Start/End: Original strand, 85 - 150
Target Start/End: Complemental strand, 23465573 - 23465507
Alignment:
Q  85 gggtgtattggattaggattttaaaagga-aatttttgtatgaaaaattctaatggattttaaaaga 150  Q
    |||||||||||||||||||||| |||||| ||||||||| | ||||| ||| | | |||||||||||    
T  23465573 gggtgtattggattaggatttttaaaggacaatttttgtttaaaaaagtcttaagaattttaaaaga 23465507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 31; E-Value: 0.00000001
Query Start/End: Original strand, 84 - 150
Target Start/End: Complemental strand, 25446749 - 25446683
Alignment:
Q  84 ggggtgtattggattaggattttaaaaggaaatttttgtatgaaaaattctaatggattttaaaaga 150  Q
    |||||||||||||||||||||||||| |  ||||||||| | ||||| |||   |||||||||||||    
T  25446749 ggggtgtattggattaggattttaaaggacaatttttgtttaaaaaagtcttgaggattttaaaaga 25446683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 30; E-Value: 0.00000005
Query Start/End: Original strand, 82 - 111
Target Start/End: Complemental strand, 5105038 - 5105009
Alignment:
Q  82 agggggtgtattggattaggattttaaaag 111  Q
    ||||||||||||||||||||||||||||||    
T  5105038 agggggtgtattggattaggattttaaaag 5105009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 30; E-Value: 0.00000005
Query Start/End: Original strand, 74 - 111
Target Start/End: Complemental strand, 16019952 - 16019915
Alignment:
Q  74 aaaatctaagggggtgtattggattaggattttaaaag 111  Q
    |||| ||| |||||||||||||||||||||||||||||    
T  16019952 aaaaactaggggggtgtattggattaggattttaaaag 16019915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 30; E-Value: 0.00000005
Query Start/End: Original strand, 81 - 150
Target Start/End: Original strand, 34228157 - 34228226
Alignment:
Q  81 aagggggtgtattggattaggattttaaaaggaaatttttgtatgaaaaattctaatggattttaaaaga 150  Q
    ||||||||||||||||||| ||||||||| |  ||||||||| | ||||| |||   |||||||||||||    
T  34228157 aagggggtgtattggattatgattttaaaggataatttttgtttaaaaaagtcttgaggattttaaaaga 34228226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 30; E-Value: 0.00000005
Query Start/End: Original strand, 85 - 150
Target Start/End: Complemental strand, 55975233 - 55975168
Alignment:
Q  85 gggtgtattggattaggattttaaaaggaaatttttgtatgaaaaattctaatggattttaaaaga 150  Q
    ||||||||||||||||||||||||| |  ||||||||| | ||||| |||   |||||||||||||    
T  55975233 gggtgtattggattaggattttaaaggacaatttttgtttaaaaaagtcttgaggattttaaaaga 55975168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 29; E-Value: 0.0000002
Query Start/End: Original strand, 90 - 150
Target Start/End: Original strand, 1848393 - 1848453
Alignment:
Q  90 tattggattaggattttaaaaggaaatttttgtatgaaaaattctaatggattttaaaaga 150  Q
    |||||||||| |||||| ||||  || |||||||||||||| |||| |||| |||||||||    
T  1848393 tattggattaagatttttaaagataagttttgtatgaaaaagtctagtggactttaaaaga 1848453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 29; E-Value: 0.0000002
Query Start/End: Original strand, 86 - 150
Target Start/End: Complemental strand, 3437204 - 3437140
Alignment:
Q  86 ggtgtattggattaggattttaaaaggaaatttttgtatgaaaaattctaatggattttaaaaga 150  Q
    ||||||||| ||||||||||||||||  ||||||||| | ||||| |||   |||||||||||||    
T  3437204 ggtgtattgaattaggattttaaaagacaatttttgtttaaaaaagtcttgaggattttaaaaga 3437140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 29; E-Value: 0.0000002
Query Start/End: Original strand, 83 - 111
Target Start/End: Complemental strand, 5442486 - 5442458
Alignment:
Q  83 gggggtgtattggattaggattttaaaag 111  Q
    |||||||||||||||||||||||||||||    
T  5442486 gggggtgtattggattaggattttaaaag 5442458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 29; E-Value: 0.0000002
Query Start/End: Original strand, 83 - 111
Target Start/End: Complemental strand, 27769159 - 27769131
Alignment:
Q  83 gggggtgtattggattaggattttaaaag 111  Q
    |||||||||||||||||||||||||||||    
T  27769159 gggggtgtattggattaggattttaaaag 27769131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 29; E-Value: 0.0000002
Query Start/End: Original strand, 83 - 111
Target Start/End: Complemental strand, 38234698 - 38234670
Alignment:
Q  83 gggggtgtattggattaggattttaaaag 111  Q
    |||||||||||||||||||||||||||||    
T  38234698 gggggtgtattggattaggattttaaaag 38234670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 29; E-Value: 0.0000002
Query Start/End: Original strand, 83 - 111
Target Start/End: Complemental strand, 48262170 - 48262142
Alignment:
Q  83 gggggtgtattggattaggattttaaaag 111  Q
    |||||||||||||||||||||||||||||    
T  48262170 gggggtgtattggattaggattttaaaag 48262142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 29; E-Value: 0.0000002
Query Start/End: Original strand, 83 - 111
Target Start/End: Original strand, 54852660 - 54852688
Alignment:
Q  83 gggggtgtattggattaggattttaaaag 111  Q
    |||||||||||||||||||||||||||||    
T  54852660 gggggtgtattggattaggattttaaaag 54852688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 28; E-Value: 0.0000008
Query Start/End: Original strand, 80 - 111
Target Start/End: Original strand, 21309036 - 21309067
Alignment:
Q  80 taagggggtgtattggattaggattttaaaag 111  Q
    |||||||||||||||||||| |||||||||||    
T  21309036 taagggggtgtattggattaagattttaaaag 21309067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 28; E-Value: 0.0000008
Query Start/End: Original strand, 83 - 122
Target Start/End: Complemental strand, 22202742 - 22202703
Alignment:
Q  83 gggggtgtattggattaggattttaaaaggaaatttttgt 122  Q
    ||||||||||||||||||||||||||| |  |||||||||    
T  22202742 gggggtgtattggattaggattttaaaggacaatttttgt 22202703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 28; E-Value: 0.0000008
Query Start/End: Original strand, 84 - 111
Target Start/End: Complemental strand, 23988291 - 23988264
Alignment:
Q  84 ggggtgtattggattaggattttaaaag 111  Q
    ||||||||||||||||||||||||||||    
T  23988291 ggggtgtattggattaggattttaaaag 23988264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 28; E-Value: 0.0000008
Query Start/End: Original strand, 79 - 150
Target Start/End: Complemental strand, 42722047 - 42721977
Alignment:
Q  79 ctaagggggtgtattggattaggattttaaaaggaaatttttgtatgaaaaattctaatggattttaaaaga 150  Q
    ||||||||||||||||||||| |||||| |||||| ||||||   | ||||| ||| | |||||||||||||    
T  42722047 ctaagggggtgtattggattaagatttt-aaaggacattttttatttaaaaagtcttaaggattttaaaaga 42721977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 28; E-Value: 0.0000008
Query Start/End: Original strand, 80 - 111
Target Start/End: Complemental strand, 54342245 - 54342214
Alignment:
Q  80 taagggggtgtattggattaggattttaaaag 111  Q
    ||||||||||||||||||||| ||||||||||    
T  54342245 taagggggtgtattggattagaattttaaaag 54342214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0287 (Bit Score: 47; Significance: 4e-18; HSPs: 1)
Name: scaffold0287
Description:

Target: scaffold0287; HSP #1
Raw Score: 47; E-Value: 4e-18
Query Start/End: Original strand, 84 - 154
Target Start/End: Original strand, 10863 - 10933
Alignment:
Q  84 ggggtgtattggattaggattttaaaaggaaatttttgtatgaaaaattctaatggattttaaaagattat 154  Q
    ||||||||||||||||||||||||||||  ||||||| ||||||||| |||| ||||||| ||||||||||    
T  10863 ggggtgtattggattaggattttaaaagacaatttttatatgaaaaagtctagtggatttaaaaagattat 10933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 47; Significance: 4e-18; HSPs: 21)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 47; E-Value: 4e-18
Query Start/End: Original strand, 84 - 154
Target Start/End: Complemental strand, 3635222 - 3635152
Alignment:
Q  84 ggggtgtattggattaggattttaaaaggaaatttttgtatgaaaaattctaatggattttaaaagattat 154  Q
    ||||||||||||||||||||||||||||  ||||||| ||||||||| |||| ||||||| ||||||||||    
T  3635222 ggggtgtattggattaggattttaaaagacaatttttatatgaaaaagtctagtggatttaaaaagattat 3635152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 37; E-Value: 0.000000000003
Query Start/End: Original strand, 82 - 154
Target Start/End: Complemental strand, 40098573 - 40098502
Alignment:
Q  82 agggggtgtattggattaggattttaaaaggaaatttttgtatgaaaaattctaatggattttaaaagattat 154  Q
    |||||||||||| |||||||||||||||||   |||||||||||||||| || | || |||||||||||||||    
T  40098573 agggggtgtatttgattaggattttaaaagattatttttgtatgaaaaagtc-agtgaattttaaaagattat 40098502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 36; E-Value: 0.00000000001
Query Start/End: Original strand, 79 - 150
Target Start/End: Complemental strand, 12894059 - 12893988
Alignment:
Q  79 ctaagggggtgtattggattaggattttaaaaggaaatttttgtatgaaaaattctaatggattttaaaaga 150  Q
    ||||||||||||||||||||||||||||||| |  ||||||||| | ||||| |||   |||||||||||||    
T  12894059 ctaagggggtgtattggattaggattttaaaggacaatttttgtttaaaaaagtcttgaggattttaaaaga 12893988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 36; E-Value: 0.00000000001
Query Start/End: Original strand, 83 - 150
Target Start/End: Complemental strand, 47879799 - 47879732
Alignment:
Q  83 gggggtgtattggattaggattttaaaaggaaatttttgtatgaaaaattctaatggattttaaaaga 150  Q
    |||||||||||||||||||||||||||||  ||||||||| | ||||| |||   |||||||||||||    
T  47879799 gggggtgtattggattaggattttaaaagataatttttgtttaaaaaagtcttgaggattttaaaaga 47879732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 36; E-Value: 0.00000000001
Query Start/End: Original strand, 83 - 150
Target Start/End: Complemental strand, 47914877 - 47914810
Alignment:
Q  83 gggggtgtattggattaggattttaaaaggaaatttttgtatgaaaaattctaatggattttaaaaga 150  Q
    |||||||||||||||||||||||||||||  ||||||||| | ||||| |||   |||||||||||||    
T  47914877 gggggtgtattggattaggattttaaaagataatttttgtttaaaaaagtcttgaggattttaaaaga 47914810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 34; E-Value: 0.0000000002
Query Start/End: Original strand, 78 - 111
Target Start/End: Complemental strand, 3024024 - 3023991
Alignment:
Q  78 tctaagggggtgtattggattaggattttaaaag 111  Q
    ||||||||||||||||||||||||||||||||||    
T  3024024 tctaagggggtgtattggattaggattttaaaag 3023991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 34; E-Value: 0.0000000002
Query Start/End: Original strand, 85 - 150
Target Start/End: Complemental strand, 34695964 - 34695899
Alignment:
Q  85 gggtgtattggattaggattttaaaaggaaatttttgtatgaaaaattctaatggattttaaaaga 150  Q
    ||||||||||||||||||||||||| |  ||||||||| | ||||| ||| | |||||||||||||    
T  34695964 gggtgtattggattaggattttaaaggacaatttttgtttaaaaaagtcttaaggattttaaaaga 34695899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 32; E-Value: 0.000000003
Query Start/End: Original strand, 80 - 111
Target Start/End: Complemental strand, 33383702 - 33383671
Alignment:
Q  80 taagggggtgtattggattaggattttaaaag 111  Q
    ||||||||||||||||||||||||||||||||    
T  33383702 taagggggtgtattggattaggattttaaaag 33383671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 32; E-Value: 0.000000003
Query Start/End: Original strand, 80 - 111
Target Start/End: Original strand, 33891380 - 33891411
Alignment:
Q  80 taagggggtgtattggattaggattttaaaag 111  Q
    ||||||||||||||||||||||||||||||||    
T  33891380 taagggggtgtattggattaggattttaaaag 33891411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 32; E-Value: 0.000000003
Query Start/End: Original strand, 83 - 150
Target Start/End: Original strand, 44343000 - 44343067
Alignment:
Q  83 gggggtgtattggattaggattttaaaaggaaatttttgtatgaaaaattctaatggattttaaaaga 150  Q
    ||||||||||||||||||||||||||| |  ||||||||| | ||||| |||   |||||||||||||    
T  44343000 gggggtgtattggattaggattttaaaggacaatttttgtttaaaaaagtcttgaggattttaaaaga 44343067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 30; E-Value: 0.00000005
Query Start/End: Original strand, 82 - 111
Target Start/End: Complemental strand, 21068454 - 21068425
Alignment:
Q  82 agggggtgtattggattaggattttaaaag 111  Q
    ||||||||||||||||||||||||||||||    
T  21068454 agggggtgtattggattaggattttaaaag 21068425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 29; E-Value: 0.0000002
Query Start/End: Original strand, 83 - 111
Target Start/End: Original strand, 9881400 - 9881428
Alignment:
Q  83 gggggtgtattggattaggattttaaaag 111  Q
    |||||||||||||||||||||||||||||    
T  9881400 gggggtgtattggattaggattttaaaag 9881428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 29; E-Value: 0.0000002
Query Start/End: Original strand, 83 - 111
Target Start/End: Complemental strand, 23102386 - 23102358
Alignment:
Q  83 gggggtgtattggattaggattttaaaag 111  Q
    |||||||||||||||||||||||||||||    
T  23102386 gggggtgtattggattaggattttaaaag 23102358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 29; E-Value: 0.0000002
Query Start/End: Original strand, 83 - 111
Target Start/End: Complemental strand, 26183152 - 26183124
Alignment:
Q  83 gggggtgtattggattaggattttaaaag 111  Q
    |||||||||||||||||||||||||||||    
T  26183152 gggggtgtattggattaggattttaaaag 26183124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 29; E-Value: 0.0000002
Query Start/End: Original strand, 83 - 111
Target Start/End: Complemental strand, 39785193 - 39785165
Alignment:
Q  83 gggggtgtattggattaggattttaaaag 111  Q
    |||||||||||||||||||||||||||||    
T  39785193 gggggtgtattggattaggattttaaaag 39785165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 28; E-Value: 0.0000008
Query Start/End: Original strand, 87 - 122
Target Start/End: Complemental strand, 835129 - 835094
Alignment:
Q  87 gtgtattggattaggattttaaaaggaaatttttgt 122  Q
    |||||||||||||||||||||||||  |||||||||    
T  835129 gtgtattggattaggattttaaaagataatttttgt 835094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 28; E-Value: 0.0000008
Query Start/End: Original strand, 87 - 122
Target Start/End: Complemental strand, 1200309 - 1200274
Alignment:
Q  87 gtgtattggattaggattttaaaaggaaatttttgt 122  Q
    |||||||||||||||||||||||||  |||||||||    
T  1200309 gtgtattggattaggattttaaaagataatttttgt 1200274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 28; E-Value: 0.0000008
Query Start/End: Original strand, 84 - 111
Target Start/End: Complemental strand, 18839388 - 18839361
Alignment:
Q  84 ggggtgtattggattaggattttaaaag 111  Q
    ||||||||||||||||||||||||||||    
T  18839388 ggggtgtattggattaggattttaaaag 18839361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 28; E-Value: 0.0000008
Query Start/End: Original strand, 84 - 111
Target Start/End: Complemental strand, 29894051 - 29894024
Alignment:
Q  84 ggggtgtattggattaggattttaaaag 111  Q
    ||||||||||||||||||||||||||||    
T  29894051 ggggtgtattggattaggattttaaaag 29894024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 28; E-Value: 0.0000008
Query Start/End: Original strand, 84 - 111
Target Start/End: Complemental strand, 39029147 - 39029120
Alignment:
Q  84 ggggtgtattggattaggattttaaaag 111  Q
    ||||||||||||||||||||||||||||    
T  39029147 ggggtgtattggattaggattttaaaag 39029120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 28; E-Value: 0.0000008
Query Start/End: Original strand, 87 - 122
Target Start/End: Original strand, 46121680 - 46121715
Alignment:
Q  87 gtgtattggattaggattttaaaaggaaatttttgt 122  Q
    |||||||||||||||||||||||||  |||||||||    
T  46121680 gtgtattggattaggattttaaaagataatttttgt 46121715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 43; Significance: 9e-16; HSPs: 20)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 43; E-Value: 9e-16
Query Start/End: Original strand, 80 - 154
Target Start/End: Complemental strand, 46750068 - 46749995
Alignment:
Q  80 taagggggtgtattggattaggattttaaaaggaaatttttgtatgaaaaattctaatggattttaaaagattat 154  Q
    |||||||||||||||||||| |||||||||||  |||||||| |||||||| || | ||||||||||||||||||    
T  46750068 taagggggtgtattggattacgattttaaaagacaatttttg-atgaaaaagtccagtggattttaaaagattat 46749995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 38; E-Value: 0.0000000000008
Query Start/End: Original strand, 85 - 150
Target Start/End: Original strand, 10138725 - 10138790
Alignment:
Q  85 gggtgtattggattaggattttaaaaggaaatttttgtatgaaaaattctaatggattttaaaaga 150  Q
    ||||||||||||||||||||||||| |  ||||||||| | ||||||||| | |||||||||||||    
T  10138725 gggtgtattggattaggattttaaaggacaatttttgtttaaaaaattcttaaggattttaaaaga 10138790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 36; E-Value: 0.00000000001
Query Start/End: Original strand, 83 - 150
Target Start/End: Complemental strand, 7319175 - 7319109
Alignment:
Q  83 gggggtgtattggattaggattttaaaaggaaatttttgtatgaaaaattctaatggattttaaaaga 150  Q
    |||||||||||||||||||||||||||| || | |||||||| ||||| |||  ||||||||||||||    
T  7319175 gggggtgtattggattaggattttaaaa-gacaattttgtataaaaaaatcttgtggattttaaaaga 7319109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 35; E-Value: 0.00000000005
Query Start/End: Original strand, 77 - 111
Target Start/End: Complemental strand, 17947321 - 17947287
Alignment:
Q  77 atctaagggggtgtattggattaggattttaaaag 111  Q
    |||||||||||||||||||||||||||||||||||    
T  17947321 atctaagggggtgtattggattaggattttaaaag 17947287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 33; E-Value: 0.0000000008
Query Start/End: Original strand, 82 - 150
Target Start/End: Original strand, 44761616 - 44761684
Alignment:
Q  82 agggggtgtattggattaggattttaaaaggaaatttttgtatgaaaaattctaatggattttaaaaga 150  Q
    |||||||||||||||||||||||||||| |  ||||||||| | ||||| |||   |||||||||||||    
T  44761616 agggggtgtattggattaggattttaaaggataatttttgtttaaaaaagtcttgaggattttaaaaga 44761684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 32; E-Value: 0.000000003
Query Start/End: Original strand, 83 - 150
Target Start/End: Original strand, 995482 - 995549
Alignment:
Q  83 gggggtgtattggattaggattttaaaaggaaatttttgtatgaaaaattctaatggattttaaaaga 150  Q
    ||||||||||||||||||||||||||| |  ||||||||| | ||||| |||   |||||||||||||    
T  995482 gggggtgtattggattaggattttaaaggacaatttttgtttaaaaaaatcttgaggattttaaaaga 995549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 32; E-Value: 0.000000003
Query Start/End: Original strand, 83 - 150
Target Start/End: Original strand, 3999147 - 3999214
Alignment:
Q  83 gggggtgtattggattaggattttaaaaggaaatttttgtatgaaaaattctaatggattttaaaaga 150  Q
    ||||||||||||||||||||||||||| |  ||||||||| | ||||| |||   |||||||||||||    
T  3999147 gggggtgtattggattaggattttaaaggacaatttttgtttaaaaaagtcttgaggattttaaaaga 3999214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 32; E-Value: 0.000000003
Query Start/End: Original strand, 80 - 111
Target Start/End: Original strand, 10728121 - 10728152
Alignment:
Q  80 taagggggtgtattggattaggattttaaaag 111  Q
    ||||||||||||||||||||||||||||||||    
T  10728121 taagggggtgtattggattaggattttaaaag 10728152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 30; E-Value: 0.00000005
Query Start/End: Original strand, 82 - 111
Target Start/End: Complemental strand, 11432643 - 11432614
Alignment:
Q  82 agggggtgtattggattaggattttaaaag 111  Q
    ||||||||||||||||||||||||||||||    
T  11432643 agggggtgtattggattaggattttaaaag 11432614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 30; E-Value: 0.00000005
Query Start/End: Original strand, 85 - 150
Target Start/End: Complemental strand, 25419053 - 25418988
Alignment:
Q  85 gggtgtattggattaggattttaaaaggaaatttttgtatgaaaaattctaatggattttaaaaga 150  Q
    ||||||||||||||||||||||||| |  ||||||||| | ||||| |||   |||||||||||||    
T  25419053 gggtgtattggattaggattttaaaggacaatttttgtttaaaaaagtcttgaggattttaaaaga 25418988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 30; E-Value: 0.00000005
Query Start/End: Original strand, 82 - 111
Target Start/End: Complemental strand, 26108526 - 26108497
Alignment:
Q  82 agggggtgtattggattaggattttaaaag 111  Q
    ||||||||||||||||||||||||||||||    
T  26108526 agggggtgtattggattaggattttaaaag 26108497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 30; E-Value: 0.00000005
Query Start/End: Original strand, 85 - 150
Target Start/End: Complemental strand, 35338377 - 35338312
Alignment:
Q  85 gggtgtattggattaggattttaaaaggaaatttttgtatgaaaaattctaatggattttaaaaga 150  Q
    ||||||||||||||||||||||||| |  ||||||||| | ||||| ||| |  ||||||||||||    
T  35338377 gggtgtattggattaggattttaaaggacaatttttgtttaaaaaagtcttaatgattttaaaaga 35338312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 29; E-Value: 0.0000002
Query Start/End: Original strand, 83 - 111
Target Start/End: Original strand, 27239326 - 27239354
Alignment:
Q  83 gggggtgtattggattaggattttaaaag 111  Q
    |||||||||||||||||||||||||||||    
T  27239326 gggggtgtattggattaggattttaaaag 27239354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 29; E-Value: 0.0000002
Query Start/End: Original strand, 83 - 111
Target Start/End: Original strand, 36673259 - 36673287
Alignment:
Q  83 gggggtgtattggattaggattttaaaag 111  Q
    |||||||||||||||||||||||||||||    
T  36673259 gggggtgtattggattaggattttaaaag 36673287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 29; E-Value: 0.0000002
Query Start/End: Original strand, 83 - 111
Target Start/End: Original strand, 52617086 - 52617114
Alignment:
Q  83 gggggtgtattggattaggattttaaaag 111  Q
    |||||||||||||||||||||||||||||    
T  52617086 gggggtgtattggattaggattttaaaag 52617114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 28; E-Value: 0.0000008
Query Start/End: Original strand, 83 - 150
Target Start/End: Original strand, 16008097 - 16008164
Alignment:
Q  83 gggggtgtattggattaggattttaaaaggaaatttttgtatgaaaaattctaatggattttaaaaga 150  Q
    ||||| ||||||||||||||||||||| |  ||||||||| | ||||| |||   |||||||||||||    
T  16008097 gggggcgtattggattaggattttaaaggtcaatttttgtttaaaaaagtcttgaggattttaaaaga 16008164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 28; E-Value: 0.0000008
Query Start/End: Original strand, 80 - 111
Target Start/End: Original strand, 24573429 - 24573460
Alignment:
Q  80 taagggggtgtattggattaggattttaaaag 111  Q
    ||||||||||||||||||| ||||||||||||    
T  24573429 taagggggtgtattggattgggattttaaaag 24573460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 28; E-Value: 0.0000008
Query Start/End: Original strand, 80 - 111
Target Start/End: Original strand, 31645360 - 31645391
Alignment:
Q  80 taagggggtgtattggattaggattttaaaag 111  Q
    |||||||||||||||||||| |||||||||||    
T  31645360 taagggggtgtattggattaagattttaaaag 31645391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 28; E-Value: 0.0000008
Query Start/End: Original strand, 78 - 109
Target Start/End: Original strand, 39842112 - 39842143
Alignment:
Q  78 tctaagggggtgtattggattaggattttaaa 109  Q
    |||||| |||||||||||||||||||||||||    
T  39842112 tctaagagggtgtattggattaggattttaaa 39842143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 28; E-Value: 0.0000008
Query Start/End: Original strand, 84 - 111
Target Start/End: Complemental strand, 54629947 - 54629920
Alignment:
Q  84 ggggtgtattggattaggattttaaaag 111  Q
    ||||||||||||||||||||||||||||    
T  54629947 ggggtgtattggattaggattttaaaag 54629920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 40; Significance: 0.00000000000005; HSPs: 12)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 40; E-Value: 0.00000000000005
Query Start/End: Original strand, 83 - 154
Target Start/End: Complemental strand, 30878885 - 30878814
Alignment:
Q  83 gggggtgtattggattaggattttaaaaggaaatttttgtatgaaaaattctaatggattttaaaagattat 154  Q
    ||||||||||| |||||| ||||||||||   |||||||||||||||| |||| ||||| ||||||||||||    
T  30878885 gggggtgtatttgattagaattttaaaagactatttttgtatgaaaaagtctagtggatattaaaagattat 30878814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 36; E-Value: 0.00000000001
Query Start/End: Original strand, 79 - 150
Target Start/End: Complemental strand, 23929414 - 23929343
Alignment:
Q  79 ctaagggggtgtattggattaggattttaaaaggaaatttttgtatgaaaaattctaatggattttaaaaga 150  Q
    |||| ||||||||||||||||||||||||||||  ||||||||||| ||||| ||   || |||||||||||    
T  23929414 ctaaaggggtgtattggattaggattttaaaagacaatttttgtataaaaaagtcctgtgaattttaaaaga 23929343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 33; E-Value: 0.0000000008
Query Start/End: Original strand, 78 - 150
Target Start/End: Original strand, 2300143 - 2300215
Alignment:
Q  78 tctaagggggtgtattggattaggattttaaaaggaaatttttgtatgaaaaattctaatggattttaaaaga 150  Q
    |||| ||||||||||||||||||||||||||| |  ||||||||| | ||||| |||   |||||||||||||    
T  2300143 tctaggggggtgtattggattaggattttaaaggacaatttttgtttaaaaaaatcttgaggattttaaaaga 2300215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 32; E-Value: 0.000000003
Query Start/End: Original strand, 83 - 150
Target Start/End: Original strand, 6196939 - 6197006
Alignment:
Q  83 gggggtgtattggattaggattttaaaaggaaatttttgtatgaaaaattctaatggattttaaaaga 150  Q
    ||||||||||||||||||||||||||| |  ||||||||| | ||||| |||   |||||||||||||    
T  6196939 gggggtgtattggattaggattttaaaggacaatttttgtttaaaaaagtcttgaggattttaaaaga 6197006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 32; E-Value: 0.000000003
Query Start/End: Original strand, 79 - 122
Target Start/End: Original strand, 10344921 - 10344964
Alignment:
Q  79 ctaagggggtgtattggattaggattttaaaaggaaatttttgt 122  Q
    ||||||||||||||||||||||||||||||| |  |||||||||    
T  10344921 ctaagggggtgtattggattaggattttaaaggacaatttttgt 10344964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 31; E-Value: 0.00000001
Query Start/End: Original strand, 81 - 111
Target Start/End: Complemental strand, 7498197 - 7498167
Alignment:
Q  81 aagggggtgtattggattaggattttaaaag 111  Q
    |||||||||||||||||||||||||||||||    
T  7498197 aagggggtgtattggattaggattttaaaag 7498167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 29; E-Value: 0.0000002
Query Start/End: Original strand, 82 - 110
Target Start/End: Original strand, 4199585 - 4199613
Alignment:
Q  82 agggggtgtattggattaggattttaaaa 110  Q
    |||||||||||||||||||||||||||||    
T  4199585 agggggtgtattggattaggattttaaaa 4199613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 29; E-Value: 0.0000002
Query Start/End: Original strand, 83 - 111
Target Start/End: Complemental strand, 7104619 - 7104591
Alignment:
Q  83 gggggtgtattggattaggattttaaaag 111  Q
    |||||||||||||||||||||||||||||    
T  7104619 gggggtgtattggattaggattttaaaag 7104591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 29; E-Value: 0.0000002
Query Start/End: Original strand, 83 - 111
Target Start/End: Original strand, 8790011 - 8790039
Alignment:
Q  83 gggggtgtattggattaggattttaaaag 111  Q
    |||||||||||||||||||||||||||||    
T  8790011 gggggtgtattggattaggattttaaaag 8790039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 29; E-Value: 0.0000002
Query Start/End: Original strand, 83 - 111
Target Start/End: Original strand, 30384171 - 30384199
Alignment:
Q  83 gggggtgtattggattaggattttaaaag 111  Q
    |||||||||||||||||||||||||||||    
T  30384171 gggggtgtattggattaggattttaaaag 30384199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 29; E-Value: 0.0000002
Query Start/End: Original strand, 83 - 111
Target Start/End: Complemental strand, 31068515 - 31068487
Alignment:
Q  83 gggggtgtattggattaggattttaaaag 111  Q
    |||||||||||||||||||||||||||||    
T  31068515 gggggtgtattggattaggattttaaaag 31068487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 29; E-Value: 0.0000002
Query Start/End: Original strand, 83 - 111
Target Start/End: Complemental strand, 31896732 - 31896704
Alignment:
Q  83 gggggtgtattggattaggattttaaaag 111  Q
    |||||||||||||||||||||||||||||    
T  31896732 gggggtgtattggattaggattttaaaag 31896704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 37; Significance: 0.000000000003; HSPs: 16)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 37; E-Value: 0.000000000003
Query Start/End: Original strand, 90 - 150
Target Start/End: Complemental strand, 2004559 - 2004499
Alignment:
Q  90 tattggattaggattttaaaaggaaatttttgtatgaaaaattctaatggattttaaaaga 150  Q
    |||| ||||||||||||||||| |||| |||| |||||||| |||| ||||||||||||||    
T  2004559 tattcgattaggattttaaaagaaaatatttgaatgaaaaagtctagtggattttaaaaga 2004499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 34; E-Value: 0.0000000002
Query Start/End: Original strand, 83 - 152
Target Start/End: Complemental strand, 21147827 - 21147758
Alignment:
Q  83 gggggtgtattggattaggattttaaaaggaaatttttgtatgaaaaattctaatggattttaaaagatt 152  Q
    ||||||||||||||||||||||||||| |  ||||||||| | ||||| |||   |||||||||||||||    
T  21147827 gggggtgtattggattaggattttaaaggacaatttttgtttaaaaaagtcttgaggattttaaaagatt 21147758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 34; E-Value: 0.0000000002
Query Start/End: Original strand, 75 - 155
Target Start/End: Original strand, 30581984 - 30582064
Alignment:
Q  75 aaatctaagg-gggtgtattggattaggattttaaaaggaaatttttgtatgaaaaattctaatggattttaaaagattata 155  Q
    |||||||||| |||||||||| ||||| |||| |||||  ||||||||||||||||| |||  |||||||||||||| ||||    
T  30581984 aaatctaaggagggtgtattgaattagaattt-aaaagacaatttttgtatgaaaaagtcttgtggattttaaaagactata 30582064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 33; E-Value: 0.0000000008
Query Start/End: Original strand, 75 - 111
Target Start/End: Original strand, 2275261 - 2275297
Alignment:
Q  75 aaatctaagggggtgtattggattaggattttaaaag 111  Q
    |||||||||||||||||||||||| ||||||||||||    
T  2275261 aaatctaagggggtgtattggattgggattttaaaag 2275297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 32; E-Value: 0.000000003
Query Start/End: Original strand, 79 - 122
Target Start/End: Complemental strand, 849975 - 849932
Alignment:
Q  79 ctaagggggtgtattggattaggattttaaaaggaaatttttgt 122  Q
    ||||||||||||||||||||||||||||||| |  |||||||||    
T  849975 ctaagggggtgtattggattaggattttaaaggacaatttttgt 849932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 32; E-Value: 0.000000003
Query Start/End: Original strand, 80 - 111
Target Start/End: Original strand, 4239576 - 4239607
Alignment:
Q  80 taagggggtgtattggattaggattttaaaag 111  Q
    ||||||||||||||||||||||||||||||||    
T  4239576 taagggggtgtattggattaggattttaaaag 4239607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 32; E-Value: 0.000000003
Query Start/End: Original strand, 83 - 150
Target Start/End: Original strand, 43319227 - 43319294
Alignment:
Q  83 gggggtgtattggattaggattttaaaaggaaatttttgtatgaaaaattctaatggattttaaaaga 150  Q
    |||| ||||||||||||||||||||||||  ||||||||| | ||||| |||   |||||||||||||    
T  43319227 ggggatgtattggattaggattttaaaagacaatttttgtttaaaaaagtcttgaggattttaaaaga 43319294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 30; E-Value: 0.00000005
Query Start/End: Original strand, 87 - 152
Target Start/End: Original strand, 9688372 - 9688437
Alignment:
Q  87 gtgtattggattaggattttaaaaggaaatttttgtatgaaaaattctaatggattttaaaagatt 152  Q
    |||||||||||||||| |||| |||  |||||||  |||||||| | || ||||||||||||||||    
T  9688372 gtgtattggattaggaatttagaagacaatttttacatgaaaaagtttagtggattttaaaagatt 9688437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 30; E-Value: 0.00000005
Query Start/End: Original strand, 85 - 150
Target Start/End: Original strand, 27458680 - 27458745
Alignment:
Q  85 gggtgtattggattaggattttaaaaggaaatttttgtatgaaaaattctaatggattttaaaaga 150  Q
    ||||||||||||||||||||||||| |  ||||||||| | ||||| |||   |||||||||||||    
T  27458680 gggtgtattggattaggattttaaaggacaatttttgtttaaaaaagtcttgaggattttaaaaga 27458745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 29; E-Value: 0.0000002
Query Start/End: Original strand, 83 - 111
Target Start/End: Original strand, 13999213 - 13999241
Alignment:
Q  83 gggggtgtattggattaggattttaaaag 111  Q
    |||||||||||||||||||||||||||||    
T  13999213 gggggtgtattggattaggattttaaaag 13999241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 29; E-Value: 0.0000002
Query Start/End: Original strand, 83 - 111
Target Start/End: Original strand, 28592999 - 28593027
Alignment:
Q  83 gggggtgtattggattaggattttaaaag 111  Q
    |||||||||||||||||||||||||||||    
T  28592999 gggggtgtattggattaggattttaaaag 28593027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 29; E-Value: 0.0000002
Query Start/End: Original strand, 83 - 111
Target Start/End: Original strand, 40012816 - 40012844
Alignment:
Q  83 gggggtgtattggattaggattttaaaag 111  Q
    |||||||||||||||||||||||||||||    
T  40012816 gggggtgtattggattaggattttaaaag 40012844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 28; E-Value: 0.0000008
Query Start/End: Original strand, 80 - 111
Target Start/End: Original strand, 4549360 - 4549391
Alignment:
Q  80 taagggggtgtattggattaggattttaaaag 111  Q
    |||||||||||||| |||||||||||||||||    
T  4549360 taagggggtgtattcgattaggattttaaaag 4549391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 28; E-Value: 0.0000008
Query Start/End: Original strand, 83 - 122
Target Start/End: Original strand, 5272437 - 5272476
Alignment:
Q  83 gggggtgtattggattaggattttaaaaggaaatttttgt 122  Q
    ||||||||||||||||||||||||||| |  |||||||||    
T  5272437 gggggtgtattggattaggattttaaaggacaatttttgt 5272476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 28; E-Value: 0.0000008
Query Start/End: Original strand, 84 - 111
Target Start/End: Complemental strand, 13717189 - 13717162
Alignment:
Q  84 ggggtgtattggattaggattttaaaag 111  Q
    ||||||||||||||||||||||||||||    
T  13717189 ggggtgtattggattaggattttaaaag 13717162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 28; E-Value: 0.0000008
Query Start/End: Original strand, 84 - 111
Target Start/End: Complemental strand, 13927027 - 13927000
Alignment:
Q  84 ggggtgtattggattaggattttaaaag 111  Q
    ||||||||||||||||||||||||||||    
T  13927027 ggggtgtattggattaggattttaaaag 13927000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 36; Significance: 0.00000000001; HSPs: 17)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 36; E-Value: 0.00000000001
Query Start/End: Original strand, 79 - 150
Target Start/End: Complemental strand, 33851045 - 33850974
Alignment:
Q  79 ctaagggggtgtattggattaggattttaaaaggaaatttttgtatgaaaaattctaatggattttaaaaga 150  Q
    ||||||||||||||||||||||||||||||| |  ||||||||| | ||||| |||   |||||||||||||    
T  33851045 ctaagggggtgtattggattaggattttaaaggacaatttttgtttaaaaaagtcttgaggattttaaaaga 33850974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 34; E-Value: 0.0000000002
Query Start/End: Original strand, 81 - 150
Target Start/End: Original strand, 5576131 - 5576200
Alignment:
Q  81 aagggggtgtattggattaggattttaaaaggaaatttttgtatgaaaaattctaatggattttaaaaga 150  Q
    ||||||||||||||||||||||||||||| |  ||||||||| | ||||| |||   |||||||||||||    
T  5576131 aagggggtgtattggattaggattttaaaggacaatttttgtttaaaaaagtcttggggattttaaaaga 5576200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 34; E-Value: 0.0000000002
Query Start/End: Original strand, 85 - 150
Target Start/End: Original strand, 7506439 - 7506504
Alignment:
Q  85 gggtgtattggattaggattttaaaaggaaatttttgtatgaaaaattctaatggattttaaaaga 150  Q
    ||||||||||||||||||||||||| |  ||||||||| | ||||| ||| | |||||||||||||    
T  7506439 gggtgtattggattaggattttaaaggacaatttttgtttaaaaaagtcttaaggattttaaaaga 7506504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 34; E-Value: 0.0000000002
Query Start/End: Original strand, 85 - 150
Target Start/End: Complemental strand, 37915612 - 37915547
Alignment:
Q  85 gggtgtattggattaggattttaaaaggaaatttttgtatgaaaaattctaatggattttaaaaga 150  Q
    |||| |||||||||||||||||||| |  ||||||||| | ||||||||||  |||||||||||||    
T  37915612 gggtatattggattaggattttaaatgacaatttttgtttaaaaaattctagaggattttaaaaga 37915547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 32; E-Value: 0.000000003
Query Start/End: Original strand, 83 - 150
Target Start/End: Original strand, 42734814 - 42734881
Alignment:
Q  83 gggggtgtattggattaggattttaaaaggaaatttttgtatgaaaaattctaatggattttaaaaga 150  Q
    ||||||||||||||||||||||||||| |  ||||||||| | ||||| |||   |||||||||||||    
T  42734814 gggggtgtattggattaggattttaaaggataatttttgtttaaaaaagtcttgaggattttaaaaga 42734881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 31; E-Value: 0.00000001
Query Start/End: Original strand, 86 - 152
Target Start/End: Original strand, 24501324 - 24501390
Alignment:
Q  86 ggtgtattggattaggattttaaaaggaaatttttgtatgaaaaattctaatggattttaaaagatt 152  Q
    |||||||||||||||||||||||| |  ||||||||| | ||||| |||   |||||||||||||||    
T  24501324 ggtgtattggattaggattttaaaggacaatttttgtttaaaaaaatcttgaggattttaaaagatt 24501390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 30; E-Value: 0.00000005
Query Start/End: Original strand, 82 - 111
Target Start/End: Original strand, 18957832 - 18957861
Alignment:
Q  82 agggggtgtattggattaggattttaaaag 111  Q
    ||||||||||||||||||||||||||||||    
T  18957832 agggggtgtattggattaggattttaaaag 18957861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 30; E-Value: 0.00000005
Query Start/End: Original strand, 82 - 111
Target Start/End: Complemental strand, 32498987 - 32498958
Alignment:
Q  82 agggggtgtattggattaggattttaaaag 111  Q
    ||||||||||||||||||||||||||||||    
T  32498987 agggggtgtattggattaggattttaaaag 32498958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 30; E-Value: 0.00000005
Query Start/End: Original strand, 85 - 150
Target Start/End: Original strand, 32711129 - 32711194
Alignment:
Q  85 gggtgtattggattaggattttaaaaggaaatttttgtatgaaaaattctaatggattttaaaaga 150  Q
    ||||||||||||||||||||||||| |  ||||||||| | ||||| |||   |||||||||||||    
T  32711129 gggtgtattggattaggattttaaaggataatttttgtttaaaaaagtcttgaggattttaaaaga 32711194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 30; E-Value: 0.00000005
Query Start/End: Original strand, 82 - 111
Target Start/End: Complemental strand, 34893454 - 34893425
Alignment:
Q  82 agggggtgtattggattaggattttaaaag 111  Q
    ||||||||||||||||||||||||||||||    
T  34893454 agggggtgtattggattaggattttaaaag 34893425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 30; E-Value: 0.00000005
Query Start/End: Original strand, 85 - 150
Target Start/End: Original strand, 42936794 - 42936859
Alignment:
Q  85 gggtgtattggattaggattttaaaaggaaatttttgtatgaaaaattctaatggattttaaaaga 150  Q
    ||||||||||||||||||||||||| |  ||||||||| | ||||| |||   |||||||||||||    
T  42936794 gggtgtattggattaggattttaaaggacaatttttgtttaaaaaagtcttgaggattttaaaaga 42936859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 29; E-Value: 0.0000002
Query Start/End: Original strand, 83 - 111
Target Start/End: Original strand, 14781247 - 14781275
Alignment:
Q  83 gggggtgtattggattaggattttaaaag 111  Q
    |||||||||||||||||||||||||||||    
T  14781247 gggggtgtattggattaggattttaaaag 14781275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 29; E-Value: 0.0000002
Query Start/End: Original strand, 83 - 111
Target Start/End: Original strand, 18305076 - 18305104
Alignment:
Q  83 gggggtgtattggattaggattttaaaag 111  Q
    |||||||||||||||||||||||||||||    
T  18305076 gggggtgtattggattaggattttaaaag 18305104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 28; E-Value: 0.0000008
Query Start/End: Original strand, 83 - 150
Target Start/End: Original strand, 10391693 - 10391760
Alignment:
Q  83 gggggtgtattggattaggattttaaaaggaaatttttgtatgaaaaattctaatggattttaaaaga 150  Q
    |||||||||||||||||| |||||||| |  ||||||||| | ||||| |||   |||||||||||||    
T  10391693 gggggtgtattggattagaattttaaaggataatttttgtttaaaaaagtcttgaggattttaaaaga 10391760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 28; E-Value: 0.0000008
Query Start/End: Original strand, 80 - 111
Target Start/End: Original strand, 20831076 - 20831107
Alignment:
Q  80 taagggggtgtattggattaggattttaaaag 111  Q
    ||||||||||||||| ||||||||||||||||    
T  20831076 taagggggtgtattgaattaggattttaaaag 20831107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 28; E-Value: 0.0000008
Query Start/End: Original strand, 84 - 111
Target Start/End: Complemental strand, 37857971 - 37857944
Alignment:
Q  84 ggggtgtattggattaggattttaaaag 111  Q
    ||||||||||||||||||||||||||||    
T  37857971 ggggtgtattggattaggattttaaaag 37857944  T

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Target: chr8; HSP #17
Raw Score: 28; E-Value: 0.0000008
Query Start/End: Original strand, 83 - 150
Target Start/End: Complemental strand, 42938093 - 42938026
Alignment:
Q  83 gggggtgtattggattaggattttaaaaggaaatttttgtatgaaaaattctaatggattttaaaaga 150  Q
    ||||||||||||||||||||||||||  |  ||||||||| | ||||| |||   |||||||||||||    
T  42938093 gggggtgtattggattaggattttaatggacaatttttgtttaaaaaagtcttgaggattttaaaaga 42938026  T

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Target: scaffold0940 (Bit Score: 33; Significance: 0.0000000008; HSPs: 1)
Name: scaffold0940
Description:

Target: scaffold0940; HSP #1
Raw Score: 33; E-Value: 0.0000000008
Query Start/End: Original strand, 79 - 111
Target Start/End: Original strand, 3569 - 3601
Alignment:
Q  79 ctaagggggtgtattggattaggattttaaaag 111  Q
    |||||||||||||||||||||||||||||||||    
T  3569 ctaagggggtgtattggattaggattttaaaag 3601  T

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Target: scaffold0492 (Bit Score: 33; Significance: 0.0000000008; HSPs: 1)
Name: scaffold0492
Description:

Target: scaffold0492; HSP #1
Raw Score: 33; E-Value: 0.0000000008
Query Start/End: Original strand, 79 - 111
Target Start/End: Complemental strand, 12135 - 12103
Alignment:
Q  79 ctaagggggtgtattggattaggattttaaaag 111  Q
    |||||||||||||||||||||||||||||||||    
T  12135 ctaagggggtgtattggattaggattttaaaag 12103  T

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Target: scaffold0110 (Bit Score: 30; Significance: 0.00000005; HSPs: 1)
Name: scaffold0110
Description:

Target: scaffold0110; HSP #1
Raw Score: 30; E-Value: 0.00000005
Query Start/End: Original strand, 82 - 111
Target Start/End: Original strand, 38748 - 38777
Alignment:
Q  82 agggggtgtattggattaggattttaaaag 111  Q
    ||||||||||||||||||||||||||||||    
T  38748 agggggtgtattggattaggattttaaaag 38777  T

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