View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: Solexa-NF5877-25 (Length: 130)
Name: Solexa-NF5877-25
Description: NF5877
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] Solexa-NF5877-25 |
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| [»] chr4 (1 HSPs) |
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Alignment Details
Target: chr4 (Bit Score: 124; Significance: 3e-64; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 124; E-Value: 3e-64
Query Start/End: Original strand, 7 - 130
Target Start/End: Original strand, 45528009 - 45528132
Alignment:
| Q |
7 |
acaaattcctcggcgcacttttaaactctctctccttcgttgttgtcgtaactttcgccactttcttcttagtccttcttttctatttccgatgtatcac |
106 |
Q |
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| T |
45528009 |
acaaattcctcggcgcacttttaaactctctctccttcgttgttgtcgtaactttcgccactttcttcttagtccttcttttctatttccgatgtatcac |
45528108 |
T |
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| Q |
107 |
gttcttaaaactctacatggcttt |
130 |
Q |
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| T |
45528109 |
gttcttaaaactctacatggcttt |
45528132 |
T |
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