View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: Solexa-NF5877-4 (Length: 200)

Name: Solexa-NF5877-4
Description: NF5877
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] Solexa-NF5877-4
Solexa-NF5877-4
[»] chr2 (12 HSPs)
chr2 (7-200)||(44475339-44475532)
chr2 (11-140)||(44485552-44485681)
chr2 (142-194)||(7480854-7480906)
chr2 (142-194)||(4027004-4027056)
chr2 (142-194)||(8832536-8832588)
chr2 (142-194)||(23956219-23956271)
chr2 (142-194)||(38216098-38216150)
chr2 (143-194)||(736043-736094)
chr2 (142-193)||(29774825-29774876)
chr2 (142-194)||(887491-887543)
chr2 (142-194)||(11777063-11777115)
chr2 (142-178)||(35235200-35235236)
[»] chr4 (29 HSPs)
chr4 (142-194)||(488339-488391)
chr4 (143-194)||(36254992-36255043)
chr4 (142-192)||(8130560-8130610)
chr4 (142-194)||(12495599-12495651)
chr4 (142-194)||(17222908-17222960)
chr4 (142-194)||(29877718-29877770)
chr4 (142-194)||(38345777-38345829)
chr4 (142-193)||(34633470-34633521)
chr4 (142-193)||(43699404-43699455)
chr4 (144-194)||(23335721-23335771)
chr4 (142-191)||(14987555-14987604)
chr4 (153-194)||(32628857-32628898)
chr4 (142-194)||(11256616-11256668)
chr4 (142-194)||(18424233-18424285)
chr4 (142-194)||(22273859-22273911)
chr4 (142-194)||(23297514-23297566)
chr4 (142-194)||(34526292-34526344)
chr4 (142-194)||(36740983-36741035)
chr4 (142-194)||(48687013-48687065)
chr4 (142-194)||(48721899-48721951)
chr4 (142-193)||(24101895-24101946)
chr4 (147-194)||(29615439-29615486)
chr4 (146-193)||(33534008-33534055)
chr4 (145-194)||(15184625-15184674)
chr4 (142-194)||(825761-825813)
chr4 (142-194)||(23284746-23284798)
chr4 (142-194)||(41228982-41229034)
chr4 (142-194)||(46704225-46704277)
chr4 (142-194)||(48591379-48591431)
[»] chr7 (16 HSPs)
chr7 (142-194)||(46744032-46744084)
chr7 (142-192)||(43818833-43818883)
chr7 (142-192)||(47654369-47654419)
chr7 (142-194)||(33288030-33288082)
chr7 (142-194)||(44613428-44613480)
chr7 (142-181)||(33204926-33204965)
chr7 (142-192)||(22032843-22032893)
chr7 (143-193)||(23356447-23356497)
chr7 (144-194)||(48021605-48021655)
chr7 (142-188)||(49104323-49104369)
chr7 (142-187)||(30181636-30181681)
chr7 (142-191)||(38372640-38372689)
chr7 (142-194)||(1401152-1401204)
chr7 (142-194)||(14691254-14691306)
chr7 (142-194)||(29378724-29378776)
chr7 (142-194)||(34923012-34923064)
[»] chr6 (14 HSPs)
chr6 (142-194)||(9202354-9202406)
chr6 (142-194)||(32675844-32675896)
chr6 (142-179)||(7267876-7267913)
chr6 (142-194)||(2255813-2255865)
chr6 (142-181)||(9201676-9201715)
chr6 (142-192)||(2040136-2040186)
chr6 (142-196)||(10755238-10755292)
chr6 (142-194)||(6752891-6752943)
chr6 (142-194)||(10054458-10054510)
chr6 (142-194)||(10874063-10874115)
chr6 (142-194)||(23239326-23239378)
chr6 (142-194)||(32165216-32165268)
chr6 (142-178)||(35071383-35071419)
chr6 (142-194)||(35111305-35111357)
[»] chr3 (14 HSPs)
chr3 (142-194)||(34707668-34707720)
chr3 (142-194)||(1516053-1516105)
chr3 (142-194)||(20685864-20685916)
chr3 (142-194)||(42956134-42956186)
chr3 (142-191)||(40581031-40581080)
chr3 (142-194)||(29830594-29830646)
chr3 (142-194)||(37778212-37778264)
chr3 (142-194)||(53787707-53787759)
chr3 (142-181)||(10449069-10449108)
chr3 (142-192)||(52895360-52895410)
chr3 (142-175)||(22809148-22809181)
chr3 (142-194)||(7124650-7124702)
chr3 (146-194)||(29830717-29830765)
chr3 (142-194)||(40240532-40240584)
[»] chr5 (33 HSPs)
chr5 (142-192)||(29659141-29659191)
chr5 (142-194)||(1943074-1943126)
chr5 (142-194)||(11912057-11912109)
chr5 (142-194)||(24030293-24030345)
chr5 (142-190)||(28357435-28357483)
chr5 (142-194)||(41419580-41419632)
chr5 (142-194)||(43268591-43268643)
chr5 (153-194)||(1576709-1576750)
chr5 (153-194)||(1608065-1608106)
chr5 (144-193)||(42852101-42852150)
chr5 (153-193)||(6150872-6150912)
chr5 (142-194)||(7364264-7364316)
chr5 (142-194)||(11163237-11163289)
chr5 (144-192)||(23087736-23087784)
chr5 (142-194)||(28625559-28625611)
chr5 (142-190)||(39154716-39154764)
chr5 (142-190)||(41059744-41059792)
chr5 (142-189)||(10274384-10274431)
chr5 (142-181)||(13060557-13060596)
chr5 (142-193)||(29922144-29922195)
chr5 (142-189)||(35083323-35083370)
chr5 (142-192)||(9477417-9477467)
chr5 (152-194)||(10537192-10537234)
chr5 (142-194)||(41125752-41125805)
chr5 (144-181)||(43319095-43319132)
chr5 (142-193)||(2577383-2577435)
chr5 (142-194)||(2878632-2878684)
chr5 (142-186)||(3977560-3977604)
chr5 (142-194)||(5559874-5559926)
chr5 (142-194)||(17657321-17657373)
chr5 (142-194)||(27805994-27806046)
chr5 (142-194)||(40697085-40697137)
chr5 (145-181)||(41534724-41534760)
[»] chr1 (20 HSPs)
chr1 (141-194)||(3069808-3069861)
chr1 (142-194)||(22593362-22593414)
chr1 (142-194)||(28690083-28690135)
chr1 (142-194)||(48819378-48819430)
chr1 (145-194)||(6337714-6337763)
chr1 (142-194)||(14460996-14461048)
chr1 (142-194)||(15515302-15515354)
chr1 (142-194)||(16888921-16888973)
chr1 (142-194)||(41003466-41003518)
chr1 (142-194)||(41130073-41130125)
chr1 (142-193)||(16708879-16708930)
chr1 (144-194)||(12871432-12871482)
chr1 (142-194)||(391254-391307)
chr1 (142-187)||(9572739-9572784)
chr1 (142-191)||(38781160-38781209)
chr1 (142-194)||(1005419-1005471)
chr1 (142-190)||(28870286-28870334)
chr1 (142-194)||(37329367-37329419)
chr1 (142-194)||(41196665-41196717)
chr1 (142-194)||(51477773-51477825)
[»] scaffold0157 (1 HSPs)
scaffold0157 (142-194)||(24826-24878)
[»] chr8 (19 HSPs)
chr8 (142-191)||(10213777-10213826)
chr8 (142-194)||(8752885-8752937)
chr8 (145-193)||(14262406-14262454)
chr8 (142-194)||(25333656-25333708)
chr8 (142-194)||(25465802-25465854)
chr8 (142-186)||(28280796-28280840)
chr8 (142-194)||(32131519-32131571)
chr8 (142-194)||(32975766-32975818)
chr8 (142-194)||(41145351-41145403)
chr8 (142-181)||(16926683-16926722)
chr8 (153-194)||(10298892-10298933)
chr8 (142-191)||(32212970-32213019)
chr8 (153-193)||(2563438-2563478)
chr8 (142-194)||(19925636-19925688)
chr8 (142-194)||(24350474-24350526)
chr8 (142-194)||(34286519-34286571)
chr8 (142-194)||(35286007-35286059)
chr8 (142-194)||(38895738-38895790)
chr8 (142-194)||(42363272-42363324)
[»] scaffold0015 (1 HSPs)
scaffold0015 (142-192)||(48583-48633)
[»] scaffold0024 (1 HSPs)
scaffold0024 (152-196)||(97174-97218)


Alignment Details
Target: chr2 (Bit Score: 178; Significance: 3e-96; HSPs: 12)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 178; E-Value: 3e-96
Query Start/End: Original strand, 7 - 200
Target Start/End: Original strand, 44475339 - 44475532
Alignment:
Q  7 atgttcttcgttaggtttggaacagatggttggataccagagtctgccaccttatacaacgatggctaccctcctgtaacattcaacttcaactactcaa 106  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||  |    
T  44475339 atgttcttcgttaggtttggaacagatggttggataccagagtctgccaccttatacaacgatggctaccctcctataacattcaacttcaactacttga 44475438  T
Q  107 ttcctttcggcgttccctctggcatctataattgcaataaataagtttttatgttaattcgtaagttctcactaataaaaattgtatcattgat 200  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  44475439 ttcctttcggcgttccctctggcatctataattgcaataaataagtttttatgttaattcgtaagttctcactaatgaaaattgtatcattgat 44475532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 70; E-Value: 9e-32
Query Start/End: Original strand, 11 - 140
Target Start/End: Original strand, 44485552 - 44485681
Alignment:
Q  11 tcttcgttaggtttggaacagatggttggataccagagtctgccaccttatacaacgatggctaccctcctgtaacattcaacttcaactactcaattcc 110  Q
    |||| ||||||||||||||| |||||||||| ||||||||||||||||||||| ||| || |||||||||||| |||||||||||||||||||  |||||    
T  44485552 tctttgttaggtttggaacaaatggttggatgccagagtctgccaccttatactacggtgactaccctcctgttacattcaacttcaactacttcattcc 44485651  T
Q  111 tttcggcgttccctctggcatctataattg 140  Q
    ||  || |||||||| || ||| |||||||    
T  44485652 ttcgggtgttccctccggtatcaataattg 44485681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 142 - 194
Target Start/End: Original strand, 7480854 - 7480906
Alignment:
Q  142 aataaataagtttttatgttaattcgtaagttctcactaataaaaattgtatc 194  Q
    ||||||||||||||||||||||||| |||||||| |||||| |||||||||||    
T  7480854 aataaataagtttttatgttaattcataagttctgactaatgaaaattgtatc 7480906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 37; E-Value: 0.000000000004
Query Start/End: Original strand, 142 - 194
Target Start/End: Complemental strand, 4027056 - 4027004
Alignment:
Q  142 aataaataagtttttatgttaattcgtaagttctcactaataaaaattgtatc 194  Q
    |||||||||| | |||||||||||| |||||||||||||| ||||||||||||    
T  4027056 aataaataagctattatgttaattcataagttctcactaacaaaaattgtatc 4027004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 142 - 194
Target Start/End: Complemental strand, 8832588 - 8832536
Alignment:
Q  142 aataaataagtttttatgttaattcgtaagttctcactaataaaaattgtatc 194  Q
    |||||||||| |||||||||||||| |||||| |||||||  |||||||||||    
T  8832588 aataaataagcttttatgttaattcataagttttcactaacgaaaattgtatc 8832536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 142 - 194
Target Start/End: Original strand, 23956219 - 23956271
Alignment:
Q  142 aataaataagtttttatgttaattcgtaagttctcactaataaaaattgtatc 194  Q
    ||||||||||||||||||||||||  |||||||||| |||  |||||||||||    
T  23956219 aataaataagtttttatgttaatttataagttctcattaacgaaaattgtatc 23956271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 142 - 194
Target Start/End: Complemental strand, 38216150 - 38216098
Alignment:
Q  142 aataaataagtttttatgttaattcgtaagttctcactaataaaaattgtatc 194  Q
    |||||||||| ||||||||||| || ||||||||||||||  |||||||||||    
T  38216150 aataaataagcttttatgttaactcataagttctcactaacgaaaattgtatc 38216098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 143 - 194
Target Start/End: Complemental strand, 736094 - 736043
Alignment:
Q  143 ataaataagtttttatgttaattcgtaagttctcactaataaaaattgtatc 194  Q
    |||||||||||||||||||||||  |||||||||| ||| ||||||| ||||    
T  736094 ataaataagtttttatgttaatttataagttctcaataacaaaaattatatc 736043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 142 - 193
Target Start/End: Complemental strand, 29774876 - 29774825
Alignment:
Q  142 aataaataagtttttatgttaattcgtaagttctcactaataaaaattgtat 193  Q
    |||||||||| ||||| |||||||| ||||||||||||||  ||||||||||    
T  29774876 aataaataagcttttacgttaattcataagttctcactaacgaaaattgtat 29774825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 142 - 194
Target Start/End: Complemental strand, 887543 - 887491
Alignment:
Q  142 aataaataagtttttatgttaattcgtaagttctcactaataaaaattgtatc 194  Q
    |||| ||||| |||||||||||||| ||||||||  ||||| |||||||||||    
T  887543 aatagataagcttttatgttaattcataagttcttgctaatgaaaattgtatc 887491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 142 - 194
Target Start/End: Complemental strand, 11777115 - 11777063
Alignment:
Q  142 aataaataagtttttatgttaattcgtaagttctcactaataaaaattgtatc 194  Q
    |||||||||| |||||||||| ||  |||||||||||||| ||||| ||||||    
T  11777115 aataaataaggttttatgttagtttataagttctcactaacaaaaagtgtatc 11777063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 142 - 178
Target Start/End: Complemental strand, 35235236 - 35235200
Alignment:
Q  142 aataaataagtttttatgttaattcgtaagttctcac 178  Q
    |||||||||| |||||||||||||| |||||||||||    
T  35235236 aataaataagattttatgttaattcataagttctcac 35235200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 45; Significance: 7e-17; HSPs: 29)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 45; E-Value: 7e-17
Query Start/End: Original strand, 142 - 194
Target Start/End: Original strand, 488339 - 488391
Alignment:
Q  142 aataaataagtttttatgttaattcgtaagttctcactaataaaaattgtatc 194  Q
    |||||||||| |||||||||||||| |||||||||||||||||||||||||||    
T  488339 aataaataagcttttatgttaattcataagttctcactaataaaaattgtatc 488391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 143 - 194
Target Start/End: Original strand, 36254992 - 36255043
Alignment:
Q  143 ataaataagtttttatgttaattcgtaagttctcactaataaaaattgtatc 194  Q
    ||||||||| |||||||||||||| ||||||||||||||| |||||||||||    
T  36254992 ataaataagcttttatgttaattcataagttctcactaattaaaattgtatc 36255043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 142 - 192
Target Start/End: Complemental strand, 8130610 - 8130560
Alignment:
Q  142 aataaataagtttttatgttaattcgtaagttctcactaataaaaattgta 192  Q
    ||||||||||||||||||||||||| |||||| ||||||| ||||||||||    
T  8130610 aataaataagtttttatgttaattcataagttttcactaacaaaaattgta 8130560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 37; E-Value: 0.000000000004
Query Start/End: Original strand, 142 - 194
Target Start/End: Original strand, 12495599 - 12495651
Alignment:
Q  142 aataaataagtttttatgttaattcgtaagttctcactaataaaaattgtatc 194  Q
    ||||||||||||||||||||||||  ||||||||||||||| || ||||||||    
T  12495599 aataaataagtttttatgttaatttataagttctcactaatgaatattgtatc 12495651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 37; E-Value: 0.000000000004
Query Start/End: Original strand, 142 - 194
Target Start/End: Complemental strand, 17222960 - 17222908
Alignment:
Q  142 aataaataagtttttatgttaattcgtaagttctcactaataaaaattgtatc 194  Q
    ||||||||||||||||||||||||| |||||||| |||||  |||||||||||    
T  17222960 aataaataagtttttatgttaattcataagttctaactaacgaaaattgtatc 17222908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 37; E-Value: 0.000000000004
Query Start/End: Original strand, 142 - 194
Target Start/End: Complemental strand, 29877770 - 29877718
Alignment:
Q  142 aataaataagtttttatgttaattcgtaagttctcactaataaaaattgtatc 194  Q
    |||| ||||| |||||||||||||| |||||||||||||| ||||||||||||    
T  29877770 aatatataagcttttatgttaattcataagttctcactaacaaaaattgtatc 29877718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 37; E-Value: 0.000000000004
Query Start/End: Original strand, 142 - 194
Target Start/End: Original strand, 38345777 - 38345829
Alignment:
Q  142 aataaataagtttttatgttaattcgtaagttctcactaataaaaattgtatc 194  Q
    |||||||||| |||||||||||||| ||||||||  |||||||||||||||||    
T  38345777 aataaataagcttttatgttaattcataagttctggctaataaaaattgtatc 38345829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 142 - 193
Target Start/End: Complemental strand, 34633521 - 34633470
Alignment:
Q  142 aataaataagtttttatgttaattcgtaagttctcactaataaaaattgtat 193  Q
    |||||||||| |||||||||||||| |||||||||||| || ||||||||||    
T  34633521 aataaataagcttttatgttaattcataagttctcacttatgaaaattgtat 34633470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 142 - 193
Target Start/End: Original strand, 43699404 - 43699455
Alignment:
Q  142 aataaataagtttttatgttaattcgtaagttctcactaataaaaattgtat 193  Q
    ||||||||||||||||||||||||| ||||||| ||||| | ||||||||||    
T  43699404 aataaataagtttttatgttaattcataagttcccactagtgaaaattgtat 43699455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 144 - 194
Target Start/End: Complemental strand, 23335771 - 23335721
Alignment:
Q  144 taaataagtttttatgttaattcgtaagttctcactaataaaaattgtatc 194  Q
    |||| |||||||||||||||||| |||||||||||| || |||||||||||    
T  23335771 taaacaagtttttatgttaattcataagttctcacttatgaaaattgtatc 23335721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 142 - 191
Target Start/End: Original strand, 14987555 - 14987604
Alignment:
Q  142 aataaataagtttttatgttaattcgtaagttctcactaataaaaattgt 191  Q
    ||||||||||||||||| ||||||| ||||||||||||||  ||||||||    
T  14987555 aataaataagtttttatattaattcataagttctcactaacgaaaattgt 14987604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 153 - 194
Target Start/End: Complemental strand, 32628898 - 32628857
Alignment:
Q  153 ttttatgttaattcgtaagttctcactaataaaaattgtatc 194  Q
    ||||||||||||||||||||||||||| || |||||||||||    
T  32628898 ttttatgttaattcgtaagttctcactgatcaaaattgtatc 32628857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 142 - 194
Target Start/End: Original strand, 11256616 - 11256668
Alignment:
Q  142 aataaataagtttttatgttaattcgtaagttctcactaataaaaattgtatc 194  Q
    |||||||||| |||||||||||||| ||||||||| ||||  |||||||||||    
T  11256616 aataaataagcttttatgttaattcataagttctcgctaactaaaattgtatc 11256668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 142 - 194
Target Start/End: Original strand, 18424233 - 18424285
Alignment:
Q  142 aataaataagtttttatgttaattcgtaagttctcactaataaaaattgtatc 194  Q
    |||||||||| |||||||||||||| |||||| ||| ||| ||||||||||||    
T  18424233 aataaataagcttttatgttaattcataagttttcaataacaaaaattgtatc 18424285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 142 - 194
Target Start/End: Complemental strand, 22273911 - 22273859
Alignment:
Q  142 aataaataagtttttatgttaattcgtaagttctcactaataaaaattgtatc 194  Q
    |||||||||  |||||||||||||| ||| |||||||||| ||||||||||||    
T  22273911 aataaataaacttttatgttaattcataacttctcactaacaaaaattgtatc 22273859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 142 - 194
Target Start/End: Complemental strand, 23297566 - 23297514
Alignment:
Q  142 aataaataagtttttatgttaattcgtaagttctcactaataaaaattgtatc 194  Q
    |||||||||| ||||||| |||||| ||||||||| |||| ||||||||||||    
T  23297566 aataaataagcttttatgctaattcataagttctcgctaacaaaaattgtatc 23297514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 142 - 194
Target Start/End: Original strand, 34526292 - 34526344
Alignment:
Q  142 aataaataagtttttatgttaattcgtaagttctcactaataaaaattgtatc 194  Q
    |||||||||| |||||||||||||| |||||||||||||   |||||||||||    
T  34526292 aataaataagcttttatgttaattcataagttctcactatggaaaattgtatc 34526344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 142 - 194
Target Start/End: Complemental strand, 36741035 - 36740983
Alignment:
Q  142 aataaataagtttttatgttaattcgtaagttctcactaataaaaattgtatc 194  Q
    |||||||||| |||| |||| |||| ||||||||||||||| |||||||||||    
T  36741035 aataaataagcttttgtgttgattcataagttctcactaatgaaaattgtatc 36740983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 142 - 194
Target Start/End: Complemental strand, 48687065 - 48687013
Alignment:
Q  142 aataaataagtttttatgttaattcgtaagttctcactaataaaaattgtatc 194  Q
    |||||||||  || ||||||||||| ||||||||||||||| |||||||||||    
T  48687065 aataaataaacttatatgttaattcataagttctcactaatgaaaattgtatc 48687013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 142 - 194
Target Start/End: Complemental strand, 48721951 - 48721899
Alignment:
Q  142 aataaataagtttttatgttaattcgtaagttctcactaataaaaattgtatc 194  Q
    |||||||||| |||||| ||||||| |||||||||||||| ||||||| ||||    
T  48721951 aataaataagcttttatattaattcataagttctcactaacaaaaattatatc 48721899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 142 - 193
Target Start/End: Original strand, 24101895 - 24101946
Alignment:
Q  142 aataaataagtttttatgttaattcgtaagttctcactaataaaaattgtat 193  Q
    ||||||||||||||||||||||||  |||||||||||  | |||||||||||    
T  24101895 aataaataagtttttatgttaatttataagttctcacggacaaaaattgtat 24101946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 147 - 194
Target Start/End: Complemental strand, 29615486 - 29615439
Alignment:
Q  147 ataagtttttatgttaattcgtaagttctcactaataaaaattgtatc 194  Q
    ||||| ||||||| |||||| |||||||||||||| ||||||||||||    
T  29615486 ataagcttttatgctaattcttaagttctcactaacaaaaattgtatc 29615439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 146 - 193
Target Start/End: Complemental strand, 33534055 - 33534008
Alignment:
Q  146 aataagtttttatgttaattcgtaagttctcactaataaaaattgtat 193  Q
    ||||||||||||||||| ||| ||||||||||||||  ||||||||||    
T  33534055 aataagtttttatgttagttcataagttctcactaacgaaaattgtat 33534008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 145 - 194
Target Start/End: Complemental strand, 15184674 - 15184625
Alignment:
Q  145 aaataagtttttatgttaattcgtaagttctcactaataaaaattgtatc 194  Q
    |||||||||||||| ||||||  ||||||||||||||  |||||||||||    
T  15184674 aaataagtttttattttaatttataagttctcactaacgaaaattgtatc 15184625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 142 - 194
Target Start/End: Complemental strand, 825813 - 825761
Alignment:
Q  142 aataaataagtttttatgttaattcgtaagttctcactaataaaaattgtatc 194  Q
    |||||||||| |||||||||||||| |||| | ||||||| ||||| ||||||    
T  825813 aataaataagattttatgttaattcataagctttcactaacaaaaaatgtatc 825761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 142 - 194
Target Start/End: Original strand, 23284746 - 23284798
Alignment:
Q  142 aataaataagtttttatgttaattcgtaagttctcactaataaaaattgtatc 194  Q
    ||||||||||||||||| ||||||  |||| |||||||||  |||||||||||    
T  23284746 aataaataagtttttattttaatttataagctctcactaacgaaaattgtatc 23284798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 142 - 194
Target Start/End: Complemental strand, 41229034 - 41228982
Alignment:
Q  142 aataaataagtttttatgttaattcgtaagttctcactaataaaaattgtatc 194  Q
    ||||||| || |||||| ||||||| |||||||| |||||| |||||||||||    
T  41229034 aataaattagcttttatattaattcataagttctaactaatgaaaattgtatc 41228982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 142 - 194
Target Start/End: Original strand, 46704225 - 46704277
Alignment:
Q  142 aataaataagtttttatgttaattcgtaagttctcactaataaaaattgtatc 194  Q
    ||||| ||| ||||||| ||||||| ||||||||||||||| |||||| ||||    
T  46704225 aataagtaactttttatattaattcataagttctcactaatgaaaattttatc 46704277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 142 - 194
Target Start/End: Original strand, 48591379 - 48591431
Alignment:
Q  142 aataaataagtttttatgttaattcgtaagttctcactaataaaaattgtatc 194  Q
    |||||||||| ||||| |||||||| |||||||||| |||  |||||||||||    
T  48591379 aataaataagcttttacgttaattcataagttctcattaacgaaaattgtatc 48591431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 16)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 142 - 194
Target Start/End: Complemental strand, 46744084 - 46744032
Alignment:
Q  142 aataaataagtttttatgttaattcgtaagttctcactaataaaaattgtatc 194  Q
    |||||||||| |||||||||||||||||||||||||||||  |||||||||||    
T  46744084 aataaataagcttttatgttaattcgtaagttctcactaacgaaaattgtatc 46744032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 142 - 192
Target Start/End: Original strand, 43818833 - 43818883
Alignment:
Q  142 aataaataagtttttatgttaattcgtaagttctcactaataaaaattgta 192  Q
    ||||||||||||||||| ||||||| ||||||||||||||| |||||||||    
T  43818833 aataaataagtttttatcttaattcataagttctcactaatgaaaattgta 43818883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 142 - 192
Target Start/End: Original strand, 47654369 - 47654419
Alignment:
Q  142 aataaataagtttttatgttaattcgtaagttctcactaataaaaattgta 192  Q
    ||||||||||||||||| ||||||| ||||||||||||||  |||||||||    
T  47654369 aataaataagtttttatcttaattcataagttctcactaacgaaaattgta 47654419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 142 - 194
Target Start/End: Original strand, 33288030 - 33288082
Alignment:
Q  142 aataaataagtttttatgttaattcgtaagttctcactaataaaaattgtatc 194  Q
    ||||||||||||||||||||||||| |||||| |||||||  |||| ||||||    
T  33288030 aataaataagtttttatgttaattcataagttttcactaacgaaaactgtatc 33288082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 142 - 194
Target Start/End: Original strand, 44613428 - 44613480
Alignment:
Q  142 aataaataagtttttatgttaattcgtaagttctcactaataaaaattgtatc 194  Q
    |||||||||| |||||| ||||||| |||||||| | ||||||||||||||||    
T  44613428 aataaataagcttttatattaattcataagttctaattaataaaaattgtatc 44613480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 142 - 181
Target Start/End: Complemental strand, 33204965 - 33204926
Alignment:
Q  142 aataaataagtttttatgttaattcgtaagttctcactaa 181  Q
    |||||||||| |||||||||||||| ||||||||||||||    
T  33204965 aataaataagcttttatgttaattcataagttctcactaa 33204926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 142 - 192
Target Start/End: Complemental strand, 22032893 - 22032843
Alignment:
Q  142 aataaataagtttttatgttaattcgtaagttctcactaataaaaattgta 192  Q
    ||||||||||||||||| ||||||  ||||||||||||||  |||||||||    
T  22032893 aataaataagtttttatcttaatttataagttctcactaacgaaaattgta 22032843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 143 - 193
Target Start/End: Original strand, 23356447 - 23356497
Alignment:
Q  143 ataaataagtttttatgttaattcgtaagttctcactaataaaaattgtat 193  Q
    ||||||||| |||||||||||||| || ||||||||||| |||||| ||||    
T  23356447 ataaataagcttttatgttaattcataggttctcactaacaaaaatagtat 23356497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 144 - 194
Target Start/End: Original strand, 48021605 - 48021655
Alignment:
Q  144 taaataagtttttatgttaattcgtaagttctcactaataaaaattgtatc 194  Q
    ||||||| ||||||| ||||||| |||||| |||||||| |||||||||||    
T  48021605 taaataattttttatattaattcataagttttcactaatgaaaattgtatc 48021655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 142 - 188
Target Start/End: Original strand, 49104323 - 49104369
Alignment:
Q  142 aataaataagtttttatgttaattcgtaagttctcactaataaaaat 188  Q
    ||||||||| ||||||||||||||| ||| |||||||| ||||||||    
T  49104323 aataaataaatttttatgttaattcataaattctcactcataaaaat 49104369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 142 - 187
Target Start/End: Complemental strand, 30181681 - 30181636
Alignment:
Q  142 aataaataagtttttatgttaattcgtaagttctcactaataaaaa 187  Q
    |||||||||| |||||||||||||| ||||||| ||||||| ||||    
T  30181681 aataaataagcttttatgttaattcataagttcccactaatgaaaa 30181636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 142 - 191
Target Start/End: Complemental strand, 38372689 - 38372640
Alignment:
Q  142 aataaataagtttttatgttaattcgtaagttctcactaataaaaattgt 191  Q
    ||||||| || |||||||||||||| ||||||||||||||  ||||||||    
T  38372689 aataaatcagcttttatgttaattcataagttctcactaacgaaaattgt 38372640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 142 - 194
Target Start/End: Complemental strand, 1401204 - 1401152
Alignment:
Q  142 aataaataagtttttatgttaattcgtaagttctcactaataaaaattgtatc 194  Q
    |||||||||| |||||||||||||| |||||||| ||| | ||||| ||||||    
T  1401204 aataaataagcttttatgttaattcataagttcttacttacaaaaagtgtatc 1401152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 142 - 194
Target Start/End: Original strand, 14691254 - 14691306
Alignment:
Q  142 aataaataagtttttatgttaattcgtaagttctcactaataaaaattgtatc 194  Q
    |||||||||  |||||||||||||| ||||||||||||||  |||||| ||||    
T  14691254 aataaataaccttttatgttaattcataagttctcactaacgaaaattatatc 14691306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 142 - 194
Target Start/End: Complemental strand, 29378776 - 29378724
Alignment:
Q  142 aataaataagtttttatgttaattcgtaagttctcactaataaaaattgtatc 194  Q
    |||||||||| ||||| |||||||| |||||||| |||||  |||||||||||    
T  29378776 aataaataagcttttacgttaattcataagttcttactaacgaaaattgtatc 29378724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 142 - 194
Target Start/End: Complemental strand, 34923064 - 34923012
Alignment:
Q  142 aataaataagtttttatgttaattcgtaagttctcactaataaaaattgtatc 194  Q
    |||||||||| |||||||||| ||| ||||||||||||||  |||| ||||||    
T  34923064 aataaataagcttttatgttagttcataagttctcactaacgaaaagtgtatc 34923012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 14)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 142 - 194
Target Start/End: Original strand, 9202354 - 9202406
Alignment:
Q  142 aataaataagtttttatgttaattcgtaagttctcactaataaaaattgtatc 194  Q
    |||||||||| |||||||||||||| |||||| ||||||||||||||||||||    
T  9202354 aataaataagcttttatgttaattcataagttatcactaataaaaattgtatc 9202406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 142 - 194
Target Start/End: Original strand, 32675844 - 32675896
Alignment:
Q  142 aataaataagtttttatgttaattcgtaagttctcactaataaaaattgtatc 194  Q
    ||||||||||||||||| ||||||| ||||||||||||||| |||||||||||    
T  32675844 aataaataagtttttatattaattcataagttctcactaatgaaaattgtatc 32675896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 142 - 179
Target Start/End: Complemental strand, 7267913 - 7267876
Alignment:
Q  142 aataaataagtttttatgttaattcgtaagttctcact 179  Q
    |||||||||| |||||||||||||||||||||||||||    
T  7267913 aataaataagcttttatgttaattcgtaagttctcact 7267876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 142 - 194
Target Start/End: Complemental strand, 2255865 - 2255813
Alignment:
Q  142 aataaataagtttttatgttaattcgtaagttctcactaataaaaattgtatc 194  Q
    |||||||||| |||||||||||||| || ||||||||||  ||||||||||||    
T  2255865 aataaataagcttttatgttaattcatatgttctcactaccaaaaattgtatc 2255813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 142 - 181
Target Start/End: Original strand, 9201676 - 9201715
Alignment:
Q  142 aataaataagtttttatgttaattcgtaagttctcactaa 181  Q
    |||||||||| |||||||||||||| ||||||||||||||    
T  9201676 aataaataagcttttatgttaattcataagttctcactaa 9201715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 142 - 192
Target Start/End: Original strand, 2040136 - 2040186
Alignment:
Q  142 aataaataagtttttatgttaattcgtaagttctcactaataaaaattgta 192  Q
    ||||||||||||||||| ||||||  |||||||| |||||| |||||||||    
T  2040136 aataaataagtttttatattaatttataagttctaactaatgaaaattgta 2040186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 142 - 196
Target Start/End: Original strand, 10755238 - 10755292
Alignment:
Q  142 aataaataagtttttatgttaattcgtaagttctcactaataaaaattgtatcat 196  Q
    |||||||||| |||||||||||||| |||||||| |||||  |||||||| ||||    
T  10755238 aataaataagcttttatgttaattcataagttcttactaacgaaaattgtttcat 10755292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 142 - 194
Target Start/End: Complemental strand, 6752943 - 6752891
Alignment:
Q  142 aataaataagtttttatgttaattcgtaagttctcactaataaaaattgtatc 194  Q
    |||||||||| |||||| ||||||| ||| | ||||||||| |||||||||||    
T  6752943 aataaataagcttttatattaattcataaatcctcactaatgaaaattgtatc 6752891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 142 - 194
Target Start/End: Complemental strand, 10054510 - 10054458
Alignment:
Q  142 aataaataagtttttatgttaattcgtaagttctcactaataaaaattgtatc 194  Q
    |||||||| | ||||||| ||||| |||||||| ||||||| |||||||||||    
T  10054510 aataaataggcttttatgctaatttgtaagttcccactaatgaaaattgtatc 10054458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 142 - 194
Target Start/End: Complemental strand, 10874115 - 10874063
Alignment:
Q  142 aataaataagtttttatgttaattcgtaagttctcactaataaaaattgtatc 194  Q
    |||||||||| |||||||||||||| |||||| |||| ||  |||||||||||    
T  10874115 aataaataagcttttatgttaattcataagttttcaccaactaaaattgtatc 10874063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 142 - 194
Target Start/End: Complemental strand, 23239378 - 23239326
Alignment:
Q  142 aataaataagtttttatgttaattcgtaagttctcactaataaaaattgtatc 194  Q
    |||||||||| |||||| ||||||| ||||||||||||||  ||| |||||||    
T  23239378 aataaataagcttttatattaattcataagttctcactaaggaaagttgtatc 23239326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 142 - 194
Target Start/End: Original strand, 32165216 - 32165268
Alignment:
Q  142 aataaataagtttttatgttaattcgtaagttctcactaataaaaattgtatc 194  Q
    ||||||||||||||||| ||||||  |||| |||||||||  |||||||||||    
T  32165216 aataaataagtttttattttaatttataagctctcactaacgaaaattgtatc 32165268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 142 - 178
Target Start/End: Original strand, 35071383 - 35071419
Alignment:
Q  142 aataaataagtttttatgttaattcgtaagttctcac 178  Q
    |||||||||| |||||||||||||| |||||||||||    
T  35071383 aataaataagcttttatgttaattcataagttctcac 35071419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 142 - 194
Target Start/End: Original strand, 35111305 - 35111357
Alignment:
Q  142 aataaataagtttttatgttaattcgtaagttctcactaataaaaattgtatc 194  Q
    |||||||||  |||||| ||||||||||||||||| ||||  |||||||||||    
T  35111305 aataaataaacttttatcttaattcgtaagttctcgctaacgaaaattgtatc 35111357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 14)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 142 - 194
Target Start/End: Original strand, 34707668 - 34707720
Alignment:
Q  142 aataaataagtttttatgttaattcgtaagttctcactaataaaaattgtatc 194  Q
    ||||||||||||||||||||||||||||||||||| ||||  |||||||||||    
T  34707668 aataaataagtttttatgttaattcgtaagttctcgctaacgaaaattgtatc 34707720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 37; E-Value: 0.000000000004
Query Start/End: Original strand, 142 - 194
Target Start/End: Original strand, 1516053 - 1516105
Alignment:
Q  142 aataaataagtttttatgttaattcgtaagttctcactaataaaaattgtatc 194  Q
    ||||||||||||||||| ||||||  ||||||||||||||| |||||||||||    
T  1516053 aataaataagtttttattttaatttataagttctcactaatgaaaattgtatc 1516105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 37; E-Value: 0.000000000004
Query Start/End: Original strand, 142 - 194
Target Start/End: Complemental strand, 20685916 - 20685864
Alignment:
Q  142 aataaataagtttttatgttaattcgtaagttctcactaataaaaattgtatc 194  Q
    |||||||||||||||||| ||||||  |||||||||||||| |||||||||||    
T  20685916 aataaataagtttttatgataattcacaagttctcactaatgaaaattgtatc 20685864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 37; E-Value: 0.000000000004
Query Start/End: Original strand, 142 - 194
Target Start/End: Original strand, 42956134 - 42956186
Alignment:
Q  142 aataaataagtttttatgttaattcgtaagttctcactaataaaaattgtatc 194  Q
    ||||||||||||||||||||||||  ||||||||||||||  |||||||||||    
T  42956134 aataaataagtttttatgttaatttataagttctcactaacgaaaattgtatc 42956186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 142 - 191
Target Start/End: Original strand, 40581031 - 40581080
Alignment:
Q  142 aataaataagtttttatgttaattcgtaagttctcactaataaaaattgt 191  Q
    |||||||||| |||||||||||||| ||||||||||||||  ||||||||    
T  40581031 aataaataagattttatgttaattcataagttctcactaacgaaaattgt 40581080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 142 - 194
Target Start/End: Original strand, 29830594 - 29830646
Alignment:
Q  142 aataaataagtttttatgttaattcgtaagttctcactaataaaaattgtatc 194  Q
    ||||||||||||||||| ||||||  ||||||||||||||  |||||||||||    
T  29830594 aataaataagtttttattttaatttataagttctcactaacgaaaattgtatc 29830646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 142 - 194
Target Start/End: Complemental strand, 37778264 - 37778212
Alignment:
Q  142 aataaataagtttttatgttaattcgtaagttctcactaataaaaattgtatc 194  Q
    |||||||||| |||||| ||||||  |||||||||||||| ||||||||||||    
T  37778264 aataaataagcttttattttaatttataagttctcactaacaaaaattgtatc 37778212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 142 - 194
Target Start/End: Original strand, 53787707 - 53787759
Alignment:
Q  142 aataaataagtttttatgttaattcgtaagttctcactaataaaaattgtatc 194  Q
    ||||||||||||||||| ||||||| |||||||||| ||| ||||||| ||||    
T  53787707 aataaataagtttttatcttaattcataagttctcaataacaaaaattatatc 53787759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 142 - 181
Target Start/End: Complemental strand, 10449108 - 10449069
Alignment:
Q  142 aataaataagtttttatgttaattcgtaagttctcactaa 181  Q
    ||||||||||||||||| ||||||| ||||||||||||||    
T  10449108 aataaataagtttttatcttaattcataagttctcactaa 10449069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 142 - 192
Target Start/End: Original strand, 52895360 - 52895410
Alignment:
Q  142 aataaataagtttttatgttaattcgtaagttctcactaataaaaattgta 192  Q
    |||||||||| |||||||||||||| ||| ||||||||||  |||||||||    
T  52895360 aataaataagcttttatgttaattcataaattctcactaacgaaaattgta 52895410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 142 - 175
Target Start/End: Original strand, 22809148 - 22809181
Alignment:
Q  142 aataaataagtttttatgttaattcgtaagttct 175  Q
    ||||||||||||||||||||||||| ||||||||    
T  22809148 aataaataagtttttatgttaattcataagttct 22809181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 142 - 194
Target Start/End: Original strand, 7124650 - 7124702
Alignment:
Q  142 aataaataagtttttatgttaattcgtaagttctcactaataaaaattgtatc 194  Q
    |||||||||||||| |||||||||  |||||||| | ||| ||||||||||||    
T  7124650 aataaataagttttgatgttaattgataagttcttattaacaaaaattgtatc 7124702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 146 - 194
Target Start/End: Original strand, 29830717 - 29830765
Alignment:
Q  146 aataagtttttatgttaattcgtaagttctcactaataaaaattgtatc 194  Q
    ||||||||||||| ||||||  |||||||||| ||| ||||||||||||    
T  29830717 aataagtttttattttaatttataagttctcagtaacaaaaattgtatc 29830765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 142 - 194
Target Start/End: Original strand, 40240532 - 40240584
Alignment:
Q  142 aataaataagtttttatgttaattcgtaagttctcactaataaaaattgtatc 194  Q
    |||||||||| |||||| ||||||| |||| |||||||||  |||||||||||    
T  40240532 aataaataagcttttatcttaattcataagctctcactaacgaaaattgtatc 40240584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 39; Significance: 0.0000000000003; HSPs: 33)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 142 - 192
Target Start/End: Complemental strand, 29659191 - 29659141
Alignment:
Q  142 aataaataagtttttatgttaattcgtaagttctcactaataaaaattgta 192  Q
    ||||||||||||||||| ||||||| ||||||||||||||| |||||||||    
T  29659191 aataaataagtttttatcttaattcataagttctcactaatgaaaattgta 29659141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 37; E-Value: 0.000000000004
Query Start/End: Original strand, 142 - 194
Target Start/End: Complemental strand, 1943126 - 1943074
Alignment:
Q  142 aataaataagtttttatgttaattcgtaagttctcactaataaaaattgtatc 194  Q
    |||||||||| ||||||| |||||| ||||||||||||||| |||||||||||    
T  1943126 aataaataagcttttatgctaattcataagttctcactaatgaaaattgtatc 1943074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 37; E-Value: 0.000000000004
Query Start/End: Original strand, 142 - 194
Target Start/End: Original strand, 11912057 - 11912109
Alignment:
Q  142 aataaataagtttttatgttaattcgtaagttctcactaataaaaattgtatc 194  Q
    |||||||||| ||| |||||||||| |||||||||||||| ||||||||||||    
T  11912057 aataaataagctttcatgttaattcataagttctcactaacaaaaattgtatc 11912109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 37; E-Value: 0.000000000004
Query Start/End: Original strand, 142 - 194
Target Start/End: Complemental strand, 24030345 - 24030293
Alignment:
Q  142 aataaataagtttttatgttaattcgtaagttctcactaataaaaattgtatc 194  Q
    |||||||||| |||||||||||||| ||||||||||||||  |||||||||||    
T  24030345 aataaataagcttttatgttaattcataagttctcactaacgaaaattgtatc 24030293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 37; E-Value: 0.000000000004
Query Start/End: Original strand, 142 - 190
Target Start/End: Complemental strand, 28357483 - 28357435
Alignment:
Q  142 aataaataagtttttatgttaattcgtaagttctcactaataaaaattg 190  Q
    ||||||||||||||||| ||||||||||||||||||||||  |||||||    
T  28357483 aataaataagtttttatcttaattcgtaagttctcactaacgaaaattg 28357435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 37; E-Value: 0.000000000004
Query Start/End: Original strand, 142 - 194
Target Start/End: Complemental strand, 41419632 - 41419580
Alignment:
Q  142 aataaataagtttttatgttaattcgtaagttctcactaataaaaattgtatc 194  Q
    ||||||||||||||||||||||||  ||||||||||||||  |||||||||||    
T  41419632 aataaataagtttttatgttaattgataagttctcactaacgaaaattgtatc 41419580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 37; E-Value: 0.000000000004
Query Start/End: Original strand, 142 - 194
Target Start/End: Original strand, 43268591 - 43268643
Alignment:
Q  142 aataaataagtttttatgttaattcgtaagttctcactaataaaaattgtatc 194  Q
    |||||||||| |||||||||||||  |||||||||||||| ||||||||||||    
T  43268591 aataaataagcttttatgttaatttataagttctcactaacaaaaattgtatc 43268643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 153 - 194
Target Start/End: Complemental strand, 1576750 - 1576709
Alignment:
Q  153 ttttatgttaattcgtaagttctcactaataaaaattgtatc 194  Q
    |||||||||||||| |||||||||||||| ||||||||||||    
T  1576750 ttttatgttaattcttaagttctcactaacaaaaattgtatc 1576709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 153 - 194
Target Start/End: Original strand, 1608065 - 1608106
Alignment:
Q  153 ttttatgttaattcgtaagttctcactaataaaaattgtatc 194  Q
    |||||||||||||| |||||||||||||| ||||||||||||    
T  1608065 ttttatgttaattcttaagttctcactaacaaaaattgtatc 1608106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 144 - 193
Target Start/End: Complemental strand, 42852150 - 42852101
Alignment:
Q  144 taaataagtttttatgttaattcgtaagttctcactaataaaaattgtat 193  Q
    |||||||| |||||||||||||| ||||||||||||||  ||||||||||    
T  42852150 taaataagcttttatgttaattcataagttctcactaacgaaaattgtat 42852101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 153 - 193
Target Start/End: Complemental strand, 6150912 - 6150872
Alignment:
Q  153 ttttatgttaattcgtaagttctcactaataaaaattgtat 193  Q
    ||||||||||||||||||||||||| ||| |||||||||||    
T  6150912 ttttatgttaattcgtaagttctcagtaacaaaaattgtat 6150872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 142 - 194
Target Start/End: Original strand, 7364264 - 7364316
Alignment:
Q  142 aataaataagtttttatgttaattcgtaagttctcactaataaaaattgtatc 194  Q
    |||||||||| |||||| ||||||| |||||||||||||| ||| ||||||||    
T  7364264 aataaataagcttttatattaattcataagttctcactaacaaatattgtatc 7364316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 142 - 194
Target Start/End: Original strand, 11163237 - 11163289
Alignment:
Q  142 aataaataagtttttatgttaattcgtaagttctcactaataaaaattgtatc 194  Q
    |||||||||| |||||||||||||| ||||||| ||||||  |||||||||||    
T  11163237 aataaataagcttttatgttaattcataagttcgcactaacgaaaattgtatc 11163289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 144 - 192
Target Start/End: Original strand, 23087736 - 23087784
Alignment:
Q  144 taaataagtttttatgttaattcgtaagttctcactaataaaaattgta 192  Q
    ||||| ||||||||| ||||||| |||||||||||||| ||||||||||    
T  23087736 taaattagtttttatattaattcataagttctcactaacaaaaattgta 23087784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 142 - 194
Target Start/End: Complemental strand, 28625611 - 28625559
Alignment:
Q  142 aataaataagtttttatgttaattcgtaagttctcactaataaaaattgtatc 194  Q
    |||||||||| |||||||||||||| || |||||||||||  |||||||||||    
T  28625611 aataaataagcttttatgttaattcataggttctcactaacgaaaattgtatc 28625559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 142 - 190
Target Start/End: Original strand, 39154716 - 39154764
Alignment:
Q  142 aataaataagtttttatgttaattcgtaagttctcactaataaaaattg 190  Q
    |||||||||| |||| ||||||||| |||||||||| ||||||||||||    
T  39154716 aataaataagcttttgtgttaattcataagttctcaataataaaaattg 39154764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 142 - 190
Target Start/End: Original strand, 41059744 - 41059792
Alignment:
Q  142 aataaataagtttttatgttaattcgtaagttctcactaataaaaattg 190  Q
    |||||||||| |||||||||||||| ||||||||||||||  |||||||    
T  41059744 aataaataagcttttatgttaattcataagttctcactaacgaaaattg 41059792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 142 - 189
Target Start/End: Complemental strand, 10274431 - 10274384
Alignment:
Q  142 aataaataagtttttatgttaattcgtaagttctcactaataaaaatt 189  Q
    |||||||||||||||||| ||||||||||||||||  ||| |||||||    
T  10274431 aataaataagtttttatgataattcgtaagttctctttaacaaaaatt 10274384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 142 - 181
Target Start/End: Original strand, 13060557 - 13060596
Alignment:
Q  142 aataaataagtttttatgttaattcgtaagttctcactaa 181  Q
    |||||||||| |||||||||||||| ||||||||||||||    
T  13060557 aataaataagcttttatgttaattcataagttctcactaa 13060596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 142 - 193
Target Start/End: Original strand, 29922144 - 29922195
Alignment:
Q  142 aataaataagtttttatgttaattcgtaagttctcactaataaaaattgtat 193  Q
    |||||||||| |||||| ||||||| |||| ||||||||| |||||||||||    
T  29922144 aataaataagcttttatattaattcataagctctcactaaaaaaaattgtat 29922195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 142 - 189
Target Start/End: Complemental strand, 35083370 - 35083323
Alignment:
Q  142 aataaataagtttttatgttaattcgtaagttctcactaataaaaatt 189  Q
    |||||||||| |||||||||||||| |||||||||||| || ||||||    
T  35083370 aataaataagcttttatgttaattcataagttctcactgatgaaaatt 35083323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 142 - 192
Target Start/End: Complemental strand, 9477467 - 9477417
Alignment:
Q  142 aataaataagtttttatgttaattcgtaagttctcactaataaaaattgta 192  Q
    ||||||||||||||||| ||||||| |||||||||| |||  |||||||||    
T  9477467 aataaataagtttttatcttaattcataagttctcagtaacgaaaattgta 9477417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 152 - 194
Target Start/End: Original strand, 10537192 - 10537234
Alignment:
Q  152 tttttatgttaattcgtaagttctcactaataaaaattgtatc 194  Q
    ||||||||||||||| ||||||||||||||  |||||||||||    
T  10537192 tttttatgttaattcataagttctcactaacgaaaattgtatc 10537234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 142 - 194
Target Start/End: Complemental strand, 41125805 - 41125752
Alignment:
Q  142 aataaataagtttttatgttaattcgtaagttctcactaa-taaaaattgtatc 194  Q
    |||| ||||| |||||||||||||| |||||||||||||| ||||| |||||||    
T  41125805 aatatataagcttttatgttaattcataagttctcactaactaaaatttgtatc 41125752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 144 - 181
Target Start/End: Complemental strand, 43319132 - 43319095
Alignment:
Q  144 taaataagtttttatgttaattcgtaagttctcactaa 181  Q
    ||||||||||||||| ||||||| ||||||||||||||    
T  43319132 taaataagtttttatcttaattcataagttctcactaa 43319095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 142 - 193
Target Start/End: Original strand, 2577383 - 2577435
Alignment:
Q  142 aataaataagtttttatgttaattcgtaagttctcactaa-taaaaattgtat 193  Q
    ||||||||| || |||||||||||| ||||||||||||||  |||||||||||    
T  2577383 aataaataaattgttatgttaattcataagttctcactaacgaaaaattgtat 2577435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 142 - 194
Target Start/End: Original strand, 2878632 - 2878684
Alignment:
Q  142 aataaataagtttttatgttaattcgtaagttctcactaataaaaattgtatc 194  Q
    |||||||||| |||||||||||||   ||||| ||||||| ||||||||||||    
T  2878632 aataaataagcttttatgttaatttaaaagttttcactaacaaaaattgtatc 2878684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 142 - 186
Target Start/End: Complemental strand, 3977604 - 3977560
Alignment:
Q  142 aataaataagtttttatgttaattcgtaagttctcactaataaaa 186  Q
    |||||||||| |||||||||||||| || ||||||||||| ||||    
T  3977604 aataaataagcttttatgttaattcatacgttctcactaacaaaa 3977560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 142 - 194
Target Start/End: Original strand, 5559874 - 5559926
Alignment:
Q  142 aataaataagtttttatgttaattcgtaagttctcactaataaaaattgtatc 194  Q
    |||||||||| |||||||| ||||| ||| ||||||||||  |||||||||||    
T  5559874 aataaataagcttttatgtaaattcataaattctcactaacgaaaattgtatc 5559926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 142 - 194
Target Start/End: Complemental strand, 17657373 - 17657321
Alignment:
Q  142 aataaataagtttttatgttaattcgtaagttctcactaataaaaattgtatc 194  Q
    |||||||||  |||||||||||||| ||||||||||||||  ||||| |||||    
T  17657373 aataaataaccttttatgttaattcataagttctcactaacgaaaatcgtatc 17657321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 142 - 194
Target Start/End: Complemental strand, 27806046 - 27805994
Alignment:
Q  142 aataaataagtttttatgttaattcgtaagttctcactaataaaaattgtatc 194  Q
    |||||||||  |||||||||||||  |||||| ||||||| ||||||||||||    
T  27806046 aataaataaacttttatgttaatttataagttttcactaacaaaaattgtatc 27805994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 142 - 194
Target Start/End: Complemental strand, 40697137 - 40697085
Alignment:
Q  142 aataaataagtttttatgttaattcgtaagttctcactaataaaaattgtatc 194  Q
    |||||||||| |||||||||||||| |||||| |||  || ||||||||||||    
T  40697137 aataaataagcttttatgttaattcataagttttcaggaacaaaaattgtatc 40697085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 145 - 181
Target Start/End: Complemental strand, 41534760 - 41534724
Alignment:
Q  145 aaataagtttttatgttaattcgtaagttctcactaa 181  Q
    |||||||||||||||||||||| || |||||||||||    
T  41534760 aaataagtttttatgttaattcatatgttctcactaa 41534724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 38; Significance: 0.000000000001; HSPs: 20)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 141 - 194
Target Start/End: Original strand, 3069808 - 3069861
Alignment:
Q  141 caataaataagtttttatgttaattcgtaagttctcactaataaaaattgtatc 194  Q
    ||||||||||| |||||||||||||| ||||||||||||| | |||||||||||    
T  3069808 caataaataagcttttatgttaattcataagttctcactagtgaaaattgtatc 3069861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 37; E-Value: 0.000000000004
Query Start/End: Original strand, 142 - 194
Target Start/End: Original strand, 22593362 - 22593414
Alignment:
Q  142 aataaataagtttttatgttaattcgtaagttctcactaataaaaattgtatc 194  Q
    |||||||||| |||||||||||||  |||||||||||||| ||||||||||||    
T  22593362 aataaataagcttttatgttaatttataagttctcactaacaaaaattgtatc 22593414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 37; E-Value: 0.000000000004
Query Start/End: Original strand, 142 - 194
Target Start/End: Complemental strand, 28690135 - 28690083
Alignment:
Q  142 aataaataagtttttatgttaattcgtaagttctcactaataaaaattgtatc 194  Q
    |||||||||| ||||||||||||||  || |||||||||||||||||||||||    
T  28690135 aataaataagcttttatgttaattcagaatttctcactaataaaaattgtatc 28690083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 37; E-Value: 0.000000000004
Query Start/End: Original strand, 142 - 194
Target Start/End: Complemental strand, 48819430 - 48819378
Alignment:
Q  142 aataaataagtttttatgttaattcgtaagttctcactaataaaaattgtatc 194  Q
    |||||||||| |||||||||||||| |||||||||||||| ||||| ||||||    
T  48819430 aataaataagcttttatgttaattcataagttctcactaacaaaaaatgtatc 48819378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 145 - 194
Target Start/End: Original strand, 6337714 - 6337763
Alignment:
Q  145 aaataagtttttatgttaattcgtaagttctcactaataaaaattgtatc 194  Q
    ||||||| |||||||||||||| ||||||||| |||| ||||||||||||    
T  6337714 aaataagcttttatgttaattcataagttctcgctaacaaaaattgtatc 6337763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 142 - 194
Target Start/End: Original strand, 14460996 - 14461048
Alignment:
Q  142 aataaataagtttttatgttaattcgtaagttctcactaataaaaattgtatc 194  Q
    |||||| || ||||||||||||||  ||||||||||||||| |||||||||||    
T  14460996 aataaacaaatttttatgttaatttataagttctcactaatgaaaattgtatc 14461048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 142 - 194
Target Start/End: Original strand, 15515302 - 15515354
Alignment:
Q  142 aataaataagtttttatgttaattcgtaagttctcactaataaaaattgtatc 194  Q
    |||||||||| ||| |||||||||| ||||||||||||||  |||||||||||    
T  15515302 aataaataagctttcatgttaattcataagttctcactaacgaaaattgtatc 15515354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 142 - 194
Target Start/End: Original strand, 16888921 - 16888973
Alignment:
Q  142 aataaataagtttttatgttaattcgtaagttctcactaataaaaattgtatc 194  Q
    |||||||||| ||||||||||| || ||| ||||||||||| |||||||||||    
T  16888921 aataaataagcttttatgttaagtcataaattctcactaatgaaaattgtatc 16888973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 142 - 194
Target Start/End: Complemental strand, 41003518 - 41003466
Alignment:
Q  142 aataaataagtttttatgttaattcgtaagttctcactaataaaaattgtatc 194  Q
    |||||||||  |||||||||||||  |||||||||||||||||||||| ||||    
T  41003518 aataaataaacttttatgttaattaataagttctcactaataaaaattatatc 41003466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 142 - 194
Target Start/End: Complemental strand, 41130125 - 41130073
Alignment:
Q  142 aataaataagtttttatgttaattcgtaagttctcactaataaaaattgtatc 194  Q
    |||||||||| |||||||||||||| ||||||  ||||||| |||||||||||    
T  41130125 aataaataagattttatgttaattcttaagtttgcactaatgaaaattgtatc 41130073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 142 - 193
Target Start/End: Complemental strand, 16708930 - 16708879
Alignment:
Q  142 aataaataagtttttatgttaattcgtaagttctcactaataaaaattgtat 193  Q
    ||||||||| ||||||||||||||| |||| ||| |||||| ||||||||||    
T  16708930 aataaataaatttttatgttaattcataagatcttactaatgaaaattgtat 16708879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 144 - 194
Target Start/End: Original strand, 12871432 - 12871482
Alignment:
Q  144 taaataagtttttatgttaattcgtaagttctcactaataaaaattgtatc 194  Q
    ||||||||||||||||||||||| |||||| ||| |||| ||||| |||||    
T  12871432 taaataagtttttatgttaattcataagttttcattaatgaaaatggtatc 12871482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 142 - 194
Target Start/End: Complemental strand, 391307 - 391254
Alignment:
Q  142 aataaataag-tttttatgttaattcgtaagttctcactaataaaaattgtatc 194  Q
    |||||||||| ||||||||||||||| ||||||||| ||||  |||||||||||    
T  391307 aataaataagctttttatgttaattcataagttctcgctaacgaaaattgtatc 391254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 142 - 187
Target Start/End: Original strand, 9572739 - 9572784
Alignment:
Q  142 aataaataagtttttatgttaattcgtaagttctcactaataaaaa 187  Q
    |||||||||| |||||| ||||||| |||||||||||||| |||||    
T  9572739 aataaataagcttttatattaattcataagttctcactaacaaaaa 9572784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 142 - 191
Target Start/End: Complemental strand, 38781209 - 38781160
Alignment:
Q  142 aataaataagtttttatgttaattcgtaagttctcactaataaaaattgt 191  Q
    |||||||| | |||||||||||||| ||||||||||||||  ||||||||    
T  38781209 aataaatatgcttttatgttaattcataagttctcactaaccaaaattgt 38781160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 142 - 194
Target Start/End: Complemental strand, 1005471 - 1005419
Alignment:
Q  142 aataaataagtttttatgttaattcgtaagttctcactaataaaaattgtatc 194  Q
    ||||||| || ||| |||||||||| |||||||||||||  ||||||||||||    
T  1005471 aataaatgagctttgatgttaattcataagttctcactatcaaaaattgtatc 1005419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 142 - 190
Target Start/End: Complemental strand, 28870334 - 28870286
Alignment:
Q  142 aataaataagtttttatgttaattcgtaagttctcactaataaaaattg 190  Q
    |||||||||| ||||||||| |||| ||||||||||||||  |||||||    
T  28870334 aataaataagcttttatgttcattcataagttctcactaaagaaaattg 28870286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 142 - 194
Target Start/End: Original strand, 37329367 - 37329419
Alignment:
Q  142 aataaataagtttttatgttaattcgtaagttctcactaataaaaattgtatc 194  Q
    |||||||||| |||||||||||||  ||||||||||| ||  |||||||||||    
T  37329367 aataaataagcttttatgttaatttataagttctcaccaacgaaaattgtatc 37329419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 142 - 194
Target Start/End: Original strand, 41196665 - 41196717
Alignment:
Q  142 aataaataagtttttatgttaattcgtaagttctcactaataaaaattgtatc 194  Q
    ||||||||||  |||||||||||||  ||| ||||||||| ||||||||||||    
T  41196665 aataaataagcctttatgttaattcacaagctctcactaacaaaaattgtatc 41196717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 142 - 194
Target Start/End: Original strand, 51477773 - 51477825
Alignment:
Q  142 aataaataagtttttatgttaattcgtaagttctcactaataaaaattgtatc 194  Q
    ||||||||||| |||||||||||| ||||||||||| ||| ||| ||| ||||    
T  51477773 aataaataagtgtttatgttaatttgtaagttctcagtaacaaatattatatc 51477825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0157 (Bit Score: 37; Significance: 0.000000000004; HSPs: 1)
Name: scaffold0157
Description:

Target: scaffold0157; HSP #1
Raw Score: 37; E-Value: 0.000000000004
Query Start/End: Original strand, 142 - 194
Target Start/End: Complemental strand, 24878 - 24826
Alignment:
Q  142 aataaataagtttttatgttaattcgtaagttctcactaataaaaattgtatc 194  Q
    ||||||||||||||||||||||||  ||||||||||||||| || ||||||||    
T  24878 aataaataagtttttatgttaatttataagttctcactaatgaatattgtatc 24826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 34; Significance: 0.0000000003; HSPs: 19)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 142 - 191
Target Start/End: Complemental strand, 10213826 - 10213777
Alignment:
Q  142 aataaataagtttttatgttaattcgtaagttctcactaataaaaattgt 191  Q
    |||||||||| || ||||||||||| |||||||||||||| |||||||||    
T  10213826 aataaataagcttgtatgttaattcataagttctcactaacaaaaattgt 10213777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 142 - 194
Target Start/End: Complemental strand, 8752937 - 8752885
Alignment:
Q  142 aataaataagtttttatgttaattcgtaagttctcactaataaaaattgtatc 194  Q
    |||||||||| |||||||||||||| ||||||||||| || |||| |||||||    
T  8752937 aataaataagcttttatgttaattcataagttctcacaaacaaaatttgtatc 8752885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 145 - 193
Target Start/End: Complemental strand, 14262454 - 14262406
Alignment:
Q  145 aaataagtttttatgttaattcgtaagttctcactaataaaaattgtat 193  Q
    |||||||||||||||||||||| |||| ||| ||||| |||||||||||    
T  14262454 aaataagtttttatgttaattcataagatcttactaacaaaaattgtat 14262406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 142 - 194
Target Start/End: Original strand, 25333656 - 25333708
Alignment:
Q  142 aataaataagtttttatgttaattcgtaagttctcactaataaaaattgtatc 194  Q
    |||||||||| |||||||||||||| |||||| |||||||  |||||||||||    
T  25333656 aataaataagcttttatgttaattcataagttttcactaacgaaaattgtatc 25333708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 142 - 194
Target Start/End: Original strand, 25465802 - 25465854
Alignment:
Q  142 aataaataagtttttatgttaattcgtaagttctcactaataaaaattgtatc 194  Q
    |||||||||| |||||||||||||| |||||| ||| ||| ||||||||||||    
T  25465802 aataaataagcttttatgttaattcataagttttcagtaacaaaaattgtatc 25465854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 142 - 186
Target Start/End: Complemental strand, 28280840 - 28280796
Alignment:
Q  142 aataaataagtttttatgttaattcgtaagttctcactaataaaa 186  Q
    ||||||||||||||||| ||||||| |||||||||||||| ||||    
T  28280840 aataaataagtttttatcttaattcataagttctcactaacaaaa 28280796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 142 - 194
Target Start/End: Complemental strand, 32131571 - 32131519
Alignment:
Q  142 aataaataagtttttatgttaattcgtaagttctcactaataaaaattgtatc 194  Q
    |||| ||||| |||||||||||||| ||||||||||||| | |||||||||||    
T  32131571 aatagataagcttttatgttaattcataagttctcactattgaaaattgtatc 32131519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 142 - 194
Target Start/End: Complemental strand, 32975818 - 32975766
Alignment:
Q  142 aataaataagtttttatgttaattcgtaagttctcactaataaaaattgtatc 194  Q
    |||||||||| |||||| ||||||| ||||||||||| || ||||||||||||    
T  32975818 aataaataagcttttatattaattcataagttctcacaaacaaaaattgtatc 32975766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 142 - 194
Target Start/End: Original strand, 41145351 - 41145403
Alignment:
Q  142 aataaataagtttttatgttaattcgtaagttctcactaataaaaattgtatc 194  Q
    ||||||||||||| ||| ||||||| ||||||||||||||| ||||| |||||    
T  41145351 aataaataagtttatatattaattcataagttctcactaatgaaaatcgtatc 41145403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 142 - 181
Target Start/End: Original strand, 16926683 - 16926722
Alignment:
Q  142 aataaataagtttttatgttaattcgtaagttctcactaa 181  Q
    ||||||||||||||||||||||||  ||||||||||||||    
T  16926683 aataaataagtttttatgttaatttataagttctcactaa 16926722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 153 - 194
Target Start/End: Original strand, 10298892 - 10298933
Alignment:
Q  153 ttttatgttaattcgtaagttctcactaataaaaattgtatc 194  Q
    |||||||||||||| |||||||||| ||| ||||||||||||    
T  10298892 ttttatgttaattcataagttctcattaacaaaaattgtatc 10298933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 142 - 191
Target Start/End: Original strand, 32212970 - 32213019
Alignment:
Q  142 aataaataagtttttatgttaattcgtaagttctcactaataaaaattgt 191  Q
    |||||||||| |||||||||| ||  ||||||||||||||| ||||||||    
T  32212970 aataaataagcttttatgttattttataagttctcactaatgaaaattgt 32213019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 153 - 193
Target Start/End: Complemental strand, 2563478 - 2563438
Alignment:
Q  153 ttttatgttaattcgtaagttctcactaataaaaattgtat 193  Q
    |||||||||||||| |||| ||| |||||||||||||||||    
T  2563478 ttttatgttaattcataagatcttactaataaaaattgtat 2563438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 142 - 194
Target Start/End: Complemental strand, 19925688 - 19925636
Alignment:
Q  142 aataaataagtttttatgttaattcgtaagttctcactaataaaaattgtatc 194  Q
    ||||||||||| ||||| |||||| ||||| |||||||||  |||||||||||    
T  19925688 aataaataagtatttattttaatttgtaagctctcactaacgaaaattgtatc 19925636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 142 - 194
Target Start/End: Original strand, 24350474 - 24350526
Alignment:
Q  142 aataaataagtttttatgttaattcgtaagttctcactaataaaaattgtatc 194  Q
    |||||||||| |||||||||||||| |||||||| |||||  |||||| ||||    
T  24350474 aataaataagattttatgttaattcataagttcttactaacgaaaattatatc 24350526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 142 - 194
Target Start/End: Original strand, 34286519 - 34286571
Alignment:
Q  142 aataaataagtttttatgttaattcgtaagttctcactaataaaaattgtatc 194  Q
    |||||||||| |||||| ||||||| ||||||||| ||||  |||||||||||    
T  34286519 aataaataagcttttatattaattcataagttctccctaacgaaaattgtatc 34286571  T

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Target: chr8; HSP #17
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 142 - 194
Target Start/End: Complemental strand, 35286059 - 35286007
Alignment:
Q  142 aataaataagtttttatgttaattcgtaagttctcactaataaaaattgtatc 194  Q
    |||||||||| ||| | |||||||| ||||||||| ||| |||||||||||||    
T  35286059 aataaataagctttcacgttaattcataagttctcgctactaaaaattgtatc 35286007  T

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Target: chr8; HSP #18
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 142 - 194
Target Start/End: Complemental strand, 38895790 - 38895738
Alignment:
Q  142 aataaataagtttttatgttaattcgtaagttctcactaataaaaattgtatc 194  Q
    ||||||||||||||||| ||||||  |||||| ||||||| ||| ||||||||    
T  38895790 aataaataagtttttatattaatttataagttttcactaacaaatattgtatc 38895738  T

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Target: chr8; HSP #19
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 142 - 194
Target Start/End: Original strand, 42363272 - 42363324
Alignment:
Q  142 aataaataagtttttatgttaattcgtaagttctcactaataaaaattgtatc 194  Q
    |||||||||| |||||| ||||||   ||||||||||||| ||||||||||||    
T  42363272 aataaataagcttttattttaatttaaaagttctcactaacaaaaattgtatc 42363324  T

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Target: scaffold0015 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0015
Description:

Target: scaffold0015; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 142 - 192
Target Start/End: Original strand, 48583 - 48633
Alignment:
Q  142 aataaataagtttttatgttaattcgtaagttctcactaataaaaattgta 192  Q
    |||||||||| |||||||||||||| ||||||| || ||| ||||||||||    
T  48583 aataaataagcttttatgttaattcataagttcccattaacaaaaattgta 48633  T

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Target: scaffold0024 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0024
Description:

Target: scaffold0024; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 152 - 196
Target Start/End: Original strand, 97174 - 97218
Alignment:
Q  152 tttttatgttaattcgtaagttctcactaataaaaattgtatcat 196  Q
    |||| |||||||||| ||||||||||||||  |||||||||||||    
T  97174 ttttaatgttaattcataagttctcactaacgaaaattgtatcat 97218  T

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