View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: Solexa-NF5877-6 (Length: 172)
Name: Solexa-NF5877-6
Description: NF5877
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] Solexa-NF5877-6 |
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| [»] chr7 (1 HSPs) |
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Alignment Details
Target: chr7 (Bit Score: 129; Significance: 5e-67; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 129; E-Value: 5e-67
Query Start/End: Original strand, 1 - 172
Target Start/End: Original strand, 20919136 - 20919320
Alignment:
| Q |
1 |
gagatgaagaagagaaatattaagtggagttcgcataagccgaacttatcatcatactcaaatttagaggtgatttcctgttagtttagcacttcagcat |
100 |
Q |
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| T |
20919136 |
gagatgcagaagagaaatattaagtggagttcgcataagccgaacttatcatcatactcaaatttagaggtgatttcttgttagtttagcacttcagcat |
20919235 |
T |
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| Q |
101 |
gggtgtgtttgtgtgagt-------------tacgaagtatgcattatacatgataaaattagcttccactttgtaatgtaatgt |
172 |
Q |
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| T |
20919236 |
gggtgtgtttgtgtgagttttgtgagaaaactacgaagtatgcattatacatgataaaattagcttcccctttgtaatgtaatgt |
20919320 |
T |
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