View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: Solexa-NF5886-18 (Length: 154)

Name: Solexa-NF5886-18
Description: NF5886
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] Solexa-NF5886-18
Solexa-NF5886-18
[»] chr3 (65 HSPs)
chr3 (27-151)||(25289790-25289916)
chr3 (27-151)||(15566575-15566700)
chr3 (27-151)||(30807229-30807355)
chr3 (27-151)||(35492906-35493032)
chr3 (37-151)||(52821711-52821826)
chr3 (27-151)||(8456226-8456352)
chr3 (27-151)||(21362938-21363064)
chr3 (38-151)||(26108299-26108413)
chr3 (27-151)||(40940820-40940946)
chr3 (27-151)||(46576343-46576469)
chr3 (27-151)||(34492651-34492777)
chr3 (27-151)||(45529830-45529956)
chr3 (27-151)||(48977383-48977509)
chr3 (27-151)||(49258338-49258464)
chr3 (35-151)||(25379765-25379882)
chr3 (48-151)||(10083895-10083999)
chr3 (48-151)||(10190818-10190922)
chr3 (37-151)||(26174119-26174234)
chr3 (27-151)||(18176963-18177089)
chr3 (27-151)||(40133525-40133651)
chr3 (35-151)||(53424252-53424369)
chr3 (43-149)||(53233988-53234095)
chr3 (27-151)||(7470291-7470417)
chr3 (27-151)||(30257619-30257745)
chr3 (27-151)||(31537914-31538040)
chr3 (27-151)||(45272492-45272618)
chr3 (27-151)||(32151420-32151545)
chr3 (27-132)||(7485620-7485727)
chr3 (27-151)||(29915345-29915471)
chr3 (27-151)||(29964498-29964624)
chr3 (54-151)||(39041928-39042026)
chr3 (27-151)||(52455725-52455851)
chr3 (35-151)||(25344133-25344250)
chr3 (27-151)||(38732961-38733087)
chr3 (35-151)||(11390606-11390723)
chr3 (27-127)||(19857048-19857148)
chr3 (60-151)||(1692863-1692955)
chr3 (32-151)||(53288788-53288908)
chr3 (74-151)||(8097355-8097433)
chr3 (38-151)||(14343364-14343478)
chr3 (27-134)||(55287798-55287907)
chr3 (76-151)||(2511373-2511449)
chr3 (63-145)||(51532821-51532904)
chr3 (50-151)||(8958112-8958214)
chr3 (45-134)||(49167070-49167160)
chr3 (35-151)||(4462637-4462754)
chr3 (27-134)||(50582987-50583095)
chr3 (33-101)||(9853618-9853686)
chr3 (58-132)||(25017542-25017617)
chr3 (27-115)||(4252508-4252598)
chr3 (27-88)||(9842916-9842978)
chr3 (55-151)||(33398544-33398641)
chr3 (49-135)||(26158836-26158922)
chr3 (95-151)||(1242037-1242095)
chr3 (84-143)||(17579220-17579280)
chr3 (82-124)||(40777071-40777114)
chr3 (43-120)||(50731341-50731418)
chr3 (43-120)||(50781436-50781513)
chr3 (30-125)||(4844484-4844583)
chr3 (30-125)||(4870180-4870279)
chr3 (36-64)||(24703709-24703737)
chr3 (26-136)||(50162037-50162148)
chr3 (105-151)||(1178247-1178293)
chr3 (27-99)||(47079702-47079776)
chr3 (85-151)||(48972787-48972854)
[»] chr8 (47 HSPs)
chr8 (27-151)||(34237731-34237857)
chr8 (27-151)||(3734699-3734825)
chr8 (27-151)||(4718644-4718770)
chr8 (27-151)||(19471608-19471734)
chr8 (27-151)||(19542532-19542658)
chr8 (27-151)||(19590038-19590164)
chr8 (27-151)||(39349255-39349381)
chr8 (35-151)||(15259482-15259599)
chr8 (35-151)||(28193482-28193599)
chr8 (27-146)||(32879278-32879399)
chr8 (27-146)||(42643199-42643320)
chr8 (26-151)||(42328003-42328129)
chr8 (27-151)||(2618185-2618311)
chr8 (27-147)||(18532106-18532228)
chr8 (35-151)||(27746411-27746528)
chr8 (48-151)||(14632975-14633079)
chr8 (38-151)||(21603241-21603355)
chr8 (37-151)||(264475-264590)
chr8 (37-151)||(651331-651446)
chr8 (37-151)||(837066-837181)
chr8 (27-151)||(20305907-20306033)
chr8 (27-151)||(21092540-21092666)
chr8 (35-151)||(24018390-24018507)
chr8 (35-151)||(28088294-28088411)
chr8 (29-151)||(4698799-4698922)
chr8 (54-151)||(20469944-20470042)
chr8 (33-151)||(8765602-8765721)
chr8 (55-151)||(2166727-2166822)
chr8 (46-151)||(34610763-34610869)
chr8 (36-151)||(21667559-21667675)
chr8 (82-151)||(6953083-6953153)
chr8 (27-151)||(26168925-26169050)
chr8 (27-129)||(7558041-7558145)
chr8 (35-122)||(34694681-34694769)
chr8 (35-150)||(34639284-34639399)
chr8 (35-133)||(28964041-28964140)
chr8 (27-151)||(24999241-24999359)
chr8 (44-151)||(9047354-9047462)
chr8 (35-151)||(36848825-36848942)
chr8 (80-151)||(10292108-10292179)
chr8 (35-122)||(41070769-41070857)
chr8 (49-124)||(40136938-40137013)
chr8 (43-136)||(8042670-8042757)
chr8 (85-151)||(25248407-25248473)
chr8 (74-151)||(1219396-1219474)
chr8 (36-122)||(15974915-15975000)
chr8 (82-125)||(44780087-44780131)
[»] chr7 (63 HSPs)
chr7 (27-151)||(7175938-7176064)
chr7 (27-151)||(7275276-7275402)
chr7 (27-151)||(10091187-10091313)
chr7 (27-151)||(40542986-40543112)
chr7 (35-151)||(22119896-22120013)
chr7 (5-151)||(31197568-31197715)
chr7 (27-151)||(2103054-2103180)
chr7 (27-151)||(2751270-2751396)
chr7 (27-151)||(18044106-18044232)
chr7 (27-151)||(21217909-21218035)
chr7 (43-151)||(21835167-21835276)
chr7 (35-151)||(23012584-23012701)
chr7 (27-151)||(11997848-11997974)
chr7 (44-151)||(22703503-22703611)
chr7 (27-151)||(27009358-27009484)
chr7 (35-151)||(13332499-13332616)
chr7 (27-150)||(17212052-17212177)
chr7 (27-151)||(7799908-7800034)
chr7 (27-151)||(32849590-32849716)
chr7 (27-151)||(17197026-17197152)
chr7 (36-151)||(9683835-9683951)
chr7 (59-151)||(36772379-36772471)
chr7 (44-151)||(42814881-42814989)
chr7 (49-151)||(31273936-31274039)
chr7 (27-151)||(39145727-39145854)
chr7 (27-151)||(28950868-28950996)
chr7 (44-151)||(19421248-19421356)
chr7 (35-134)||(28089824-28089924)
chr7 (36-151)||(42913589-42913705)
chr7 (69-151)||(654780-654863)
chr7 (27-136)||(2344298-2344409)
chr7 (37-151)||(27704012-27704127)
chr7 (35-136)||(27312160-27312262)
chr7 (43-123)||(22299865-22299946)
chr7 (79-151)||(29861722-29861795)
chr7 (46-151)||(14199742-14199848)
chr7 (36-151)||(9718063-9718179)
chr7 (35-121)||(22696328-22696415)
chr7 (27-127)||(22638291-22638393)
chr7 (67-151)||(16374034-16374119)
chr7 (27-99)||(23854395-23854468)
chr7 (35-150)||(28646977-28647093)
chr7 (35-134)||(8435789-8435888)
chr7 (27-105)||(25333418-25333497)
chr7 (27-105)||(31713018-31713097)
chr7 (105-151)||(23092175-23092221)
chr7 (27-123)||(40332098-40332196)
chr7 (82-151)||(41907589-41907659)
chr7 (27-147)||(43785379-43785501)
chr7 (35-96)||(28003844-28003905)
chr7 (50-136)||(36173058-36173144)
chr7 (35-136)||(12211627-12211728)
chr7 (27-104)||(21370596-21370674)
chr7 (105-151)||(21373789-21373835)
chr7 (27-150)||(23330816-23330941)
chr7 (43-120)||(38864553-38864631)
chr7 (55-151)||(22643418-22643515)
chr7 (35-134)||(1469120-1469219)
chr7 (109-151)||(3851840-3851882)
chr7 (74-127)||(35173132-35173186)
chr7 (43-77)||(24686132-24686166)
chr7 (33-125)||(41519238-41519333)
chr7 (82-125)||(11700224-11700267)
[»] chr6 (32 HSPs)
chr6 (27-151)||(654222-654348)
chr6 (27-151)||(15360174-15360300)
chr6 (35-151)||(11448875-11448992)
chr6 (27-151)||(12591632-12591758)
chr6 (27-151)||(34147341-34147467)
chr6 (27-151)||(34159957-34160083)
chr6 (27-151)||(9238970-9239096)
chr6 (27-151)||(3222711-3222836)
chr6 (27-151)||(17081130-17081256)
chr6 (56-151)||(1344960-1345056)
chr6 (27-151)||(5360147-5360273)
chr6 (35-151)||(21982396-21982513)
chr6 (27-151)||(11007160-11007286)
chr6 (27-151)||(21148586-21148712)
chr6 (27-151)||(28672062-28672188)
chr6 (35-151)||(9843942-9844059)
chr6 (27-138)||(13753235-13753348)
chr6 (74-151)||(12390468-12390546)
chr6 (47-132)||(14212908-14212994)
chr6 (43-151)||(9690714-9690823)
chr6 (27-113)||(22576062-22576150)
chr6 (27-136)||(9208247-9208357)
chr6 (45-143)||(11840915-11841014)
chr6 (48-151)||(28968118-28968222)
chr6 (46-125)||(17706409-17706489)
chr6 (27-140)||(33499469-33499584)
chr6 (27-136)||(33718549-33718660)
chr6 (60-149)||(31039049-31039139)
chr6 (35-131)||(8479316-8479412)
chr6 (55-136)||(17149548-17149629)
chr6 (35-134)||(17420869-17420969)
chr6 (27-103)||(3625863-3625940)
[»] chr2 (55 HSPs)
chr2 (27-151)||(44946129-44946255)
chr2 (27-151)||(33827649-33827775)
chr2 (35-151)||(17324770-17324887)
chr2 (43-151)||(27290600-27290709)
chr2 (44-151)||(10582066-10582174)
chr2 (27-151)||(11941286-11941412)
chr2 (27-151)||(15037954-15038080)
chr2 (27-151)||(30466906-30467032)
chr2 (35-151)||(44976230-44976347)
chr2 (27-132)||(25293161-25293268)
chr2 (27-151)||(24195999-24196125)
chr2 (44-151)||(41314005-41314113)
chr2 (27-129)||(18976524-18976627)
chr2 (48-151)||(1191530-1191634)
chr2 (48-151)||(43374401-43374505)
chr2 (62-151)||(35171831-35171921)
chr2 (35-151)||(4567513-4567630)
chr2 (48-151)||(36242388-36242492)
chr2 (48-151)||(45271401-45271505)
chr2 (26-151)||(40997426-40997553)
chr2 (59-151)||(8258925-8259018)
chr2 (48-151)||(5394034-5394138)
chr2 (27-133)||(32845086-32845194)
chr2 (43-151)||(19054037-19054146)
chr2 (47-151)||(34516489-34516589)
chr2 (27-151)||(36390644-36390768)
chr2 (27-150)||(8192428-8192553)
chr2 (27-151)||(27269420-27269552)
chr2 (35-151)||(41329847-41329963)
chr2 (48-151)||(13266507-13266611)
chr2 (27-128)||(6714380-6714483)
chr2 (43-105)||(4852570-4852632)
chr2 (82-151)||(23787084-23787154)
chr2 (27-145)||(19605927-19606046)
chr2 (27-151)||(5608110-5608236)
chr2 (77-151)||(2140563-2140634)
chr2 (105-151)||(3943815-3943861)
chr2 (43-142)||(918782-918884)
chr2 (27-133)||(14946774-14946882)
chr2 (44-122)||(18708490-18708569)
chr2 (45-151)||(19849847-19849954)
chr2 (54-136)||(28194225-28194307)
chr2 (105-151)||(28668948-28668994)
chr2 (49-151)||(13747581-13747684)
chr2 (55-130)||(29361578-29361653)
chr2 (27-102)||(32526211-32526287)
chr2 (48-134)||(19525490-19525576)
chr2 (48-136)||(29698164-29698252)
chr2 (43-114)||(3405265-3405337)
chr2 (27-114)||(34041572-34041663)
chr2 (49-136)||(40591201-40591288)
chr2 (108-151)||(714201-714244)
chr2 (27-69)||(6007048-6007091)
chr2 (85-150)||(19174817-19174883)
chr2 (82-136)||(30943147-30943201)
[»] chr1 (63 HSPs)
chr1 (27-151)||(4621313-4621439)
chr1 (27-151)||(24674388-24674514)
chr1 (27-151)||(8077642-8077768)
chr1 (27-151)||(27454942-27455068)
chr1 (27-151)||(46607805-46607931)
chr1 (27-151)||(15059478-15059604)
chr1 (35-151)||(24122027-24122144)
chr1 (44-151)||(17935782-17935890)
chr1 (27-151)||(7197323-7197448)
chr1 (43-151)||(7578421-7578530)
chr1 (35-151)||(7766803-7766920)
chr1 (27-151)||(30677171-30677297)
chr1 (54-151)||(9500431-9500529)
chr1 (35-151)||(2272348-2272465)
chr1 (27-142)||(23232350-23232467)
chr1 (44-151)||(1378911-1379019)
chr1 (35-134)||(46113495-46113595)
chr1 (27-136)||(23734111-23734222)
chr1 (27-136)||(23741303-23741414)
chr1 (46-147)||(37351541-37351643)
chr1 (43-151)||(7946856-7946965)
chr1 (49-151)||(45859119-45859222)
chr1 (27-151)||(168196-168322)
chr1 (48-151)||(33905586-33905690)
chr1 (27-121)||(34778337-34778433)
chr1 (27-151)||(32729540-32729665)
chr1 (43-151)||(18646865-18646974)
chr1 (55-143)||(36155972-36156061)
chr1 (27-120)||(20487297-20487392)
chr1 (27-152)||(29057413-29057539)
chr1 (27-151)||(21726724-21726850)
chr1 (44-151)||(8779812-8779920)
chr1 (44-151)||(18533800-18533908)
chr1 (27-105)||(14258550-14258629)
chr1 (43-151)||(32930761-32930870)
chr1 (45-136)||(19034478-19034569)
chr1 (55-136)||(25237081-25237162)
chr1 (79-151)||(8254828-8254901)
chr1 (27-134)||(24216973-24217081)
chr1 (35-118)||(1378749-1378833)
chr1 (35-122)||(52135134-52135222)
chr1 (31-136)||(39964510-39964618)
chr1 (43-151)||(40145962-40146066)
chr1 (35-134)||(809226-809325)
chr1 (82-136)||(16539659-16539713)
chr1 (27-77)||(6776140-6776190)
chr1 (109-151)||(45331698-45331740)
chr1 (27-151)||(19480528-19480656)
chr1 (27-136)||(37046986-37047097)
chr1 (27-124)||(39714753-39714853)
chr1 (27-125)||(44417436-44417536)
chr1 (27-136)||(1486415-1486523)
chr1 (35-103)||(1818738-1818806)
chr1 (27-136)||(1138574-1138684)
chr1 (37-119)||(25496596-25496679)
chr1 (35-69)||(1095154-1095188)
chr1 (43-136)||(10059067-10059160)
chr1 (30-104)||(36921621-36921695)
chr1 (82-130)||(2537749-2537798)
chr1 (27-124)||(39012292-39012392)
chr1 (27-136)||(49101732-49101843)
chr1 (27-78)||(9926298-9926350)
chr1 (35-78)||(37349527-37349570)
[»] chr5 (57 HSPs)
chr5 (35-151)||(8484737-8484854)
chr5 (35-151)||(38684212-38684329)
chr5 (27-151)||(11926578-11926704)
chr5 (27-151)||(25586927-25587053)
chr5 (27-151)||(15641181-15641307)
chr5 (27-151)||(32059516-32059642)
chr5 (27-136)||(33709592-33709702)
chr5 (27-151)||(34310137-34310263)
chr5 (43-151)||(37495059-37495168)
chr5 (27-151)||(27498807-27498933)
chr5 (48-151)||(19456286-19456389)
chr5 (27-151)||(30485823-30485949)
chr5 (35-136)||(38631052-38631154)
chr5 (31-151)||(6014356-6014477)
chr5 (35-151)||(15971198-15971315)
chr5 (55-151)||(18207231-18207328)
chr5 (44-151)||(7085702-7085810)
chr5 (27-128)||(22392696-22392796)
chr5 (35-150)||(25750686-25750804)
chr5 (37-151)||(42193491-42193606)
chr5 (27-151)||(23270598-23270724)
chr5 (35-151)||(4603781-4603898)
chr5 (35-151)||(27487631-27487748)
chr5 (27-141)||(1827616-1827732)
chr5 (32-143)||(31288030-31288142)
chr5 (27-136)||(13038545-13038656)
chr5 (27-136)||(13108540-13108651)
chr5 (26-151)||(36954812-36954939)
chr5 (46-151)||(10869641-10869747)
chr5 (48-151)||(12398524-12398628)
chr5 (27-151)||(15931054-15931179)
chr5 (35-151)||(19145487-19145604)
chr5 (27-151)||(11464983-11465109)
chr5 (29-151)||(10399770-10399894)
chr5 (27-151)||(34049817-34049932)
chr5 (48-136)||(7151346-7151435)
chr5 (27-98)||(5067296-5067368)
chr5 (35-101)||(37397717-37397783)
chr5 (27-130)||(12317247-12317352)
chr5 (35-134)||(22253238-22253338)
chr5 (48-133)||(17015507-17015593)
chr5 (105-151)||(35425088-35425134)
chr5 (43-151)||(26009340-26009449)
chr5 (42-98)||(14302829-14302885)
chr5 (45-151)||(28614561-28614667)
chr5 (109-151)||(9659387-9659429)
chr5 (27-124)||(14495779-14495880)
chr5 (37-72)||(204180-204215)
chr5 (35-82)||(3715055-3715102)
chr5 (27-125)||(16773808-16773910)
chr5 (58-136)||(21236453-21236532)
chr5 (82-151)||(5049188-5049258)
chr5 (83-136)||(32061202-32061255)
chr5 (82-125)||(17028237-17028281)
chr5 (85-136)||(41568959-41569011)
chr5 (82-136)||(31206293-31206348)
chr5 (33-69)||(43241713-43241751)
[»] scaffold0576 (1 HSPs)
scaffold0576 (27-151)||(5158-5284)
[»] chr4 (55 HSPs)
chr4 (27-151)||(25852209-25852335)
chr4 (27-151)||(33696355-33696481)
chr4 (35-151)||(27528871-27528988)
chr4 (30-151)||(35229167-35229288)
chr4 (27-151)||(19660608-19660734)
chr4 (27-151)||(32986192-32986318)
chr4 (27-151)||(40058928-40059054)
chr4 (27-151)||(52983614-52983740)
chr4 (49-151)||(20078060-20078163)
chr4 (27-151)||(34844834-34844960)
chr4 (27-151)||(54127418-54127544)
chr4 (27-144)||(22625153-22625272)
chr4 (27-151)||(5609278-5609404)
chr4 (35-151)||(20566353-20566471)
chr4 (27-151)||(46714387-46714514)
chr4 (27-151)||(33992621-33992747)
chr4 (35-151)||(32942374-32942491)
chr4 (35-151)||(45787780-45787896)
chr4 (27-136)||(1985831-1985942)
chr4 (27-151)||(35674817-35674943)
chr4 (36-151)||(13550213-13550329)
chr4 (45-151)||(49287872-49287979)
chr4 (35-142)||(51535617-51535729)
chr4 (26-150)||(13873372-13873498)
chr4 (35-136)||(43719156-43719258)
chr4 (55-151)||(12500134-12500231)
chr4 (27-143)||(36131594-36131712)
chr4 (48-151)||(7392040-7392143)
chr4 (44-151)||(18875592-18875700)
chr4 (63-141)||(20527119-20527198)
chr4 (35-133)||(34835533-34835632)
chr4 (38-151)||(2351020-2351134)
chr4 (35-151)||(44343517-44343635)
chr4 (36-151)||(13584330-13584446)
chr4 (84-151)||(32990488-32990556)
chr4 (80-151)||(34723848-34723920)
chr4 (38-151)||(55961829-55961932)
chr4 (82-151)||(9517717-9517787)
chr4 (74-151)||(21387561-21387639)
chr4 (35-104)||(42245750-42245819)
chr4 (27-136)||(41621688-41621798)
chr4 (35-151)||(25969577-25969696)
chr4 (55-151)||(30879241-30879338)
chr4 (27-133)||(13771577-13771685)
chr4 (37-75)||(10125788-10125826)
chr4 (105-151)||(29875851-29875897)
chr4 (35-83)||(34722174-34722222)
chr4 (38-69)||(17415688-17415719)
chr4 (69-151)||(27574356-27574439)
chr4 (82-134)||(22630280-22630332)
chr4 (109-150)||(39288938-39288978)
chr4 (47-122)||(13017745-13017821)
chr4 (51-125)||(28635723-28635799)
chr4 (27-121)||(5795386-5795484)
chr4 (108-143)||(33289145-33289180)
[»] scaffold0623 (1 HSPs)
scaffold0623 (35-151)||(1132-1249)
[»] scaffold0366 (2 HSPs)
scaffold0366 (35-151)||(9375-9492)
scaffold0366 (35-151)||(12076-12193)
[»] scaffold0070 (1 HSPs)
scaffold0070 (27-151)||(40320-40446)
[»] scaffold0068 (1 HSPs)
scaffold0068 (27-151)||(41720-41846)
[»] scaffold0459 (1 HSPs)
scaffold0459 (35-151)||(10769-10886)
[»] scaffold0026 (1 HSPs)
scaffold0026 (27-151)||(97442-97568)
[»] scaffold0019 (1 HSPs)
scaffold0019 (54-151)||(161832-161930)
[»] scaffold0051 (1 HSPs)
scaffold0051 (26-151)||(52947-53074)
[»] scaffold0217 (1 HSPs)
scaffold0217 (35-151)||(7385-7502)
[»] scaffold0328 (2 HSPs)
scaffold0328 (27-151)||(14986-15112)
scaffold0328 (90-143)||(13128-13182)
[»] scaffold0157 (1 HSPs)
scaffold0157 (55-151)||(20246-20343)
[»] scaffold0717 (1 HSPs)
scaffold0717 (36-151)||(34-150)
[»] scaffold0049 (1 HSPs)
scaffold0049 (27-128)||(66757-66860)
[»] scaffold0199 (1 HSPs)
scaffold0199 (27-122)||(8512-8609)
[»] scaffold0460 (1 HSPs)
scaffold0460 (27-120)||(8286-8381)
[»] scaffold0102 (1 HSPs)
scaffold0102 (74-151)||(39135-39213)
[»] scaffold0028 (1 HSPs)
scaffold0028 (27-133)||(27771-27879)
[»] scaffold0016 (1 HSPs)
scaffold0016 (85-151)||(32342-32409)
[»] scaffold0240 (1 HSPs)
scaffold0240 (38-98)||(12884-12944)
[»] scaffold0200 (1 HSPs)
scaffold0200 (27-120)||(26650-26745)
[»] scaffold1175 (1 HSPs)
scaffold1175 (118-151)||(2502-2535)
[»] scaffold0258 (1 HSPs)
scaffold0258 (27-125)||(15296-15398)


Alignment Details
Target: chr3 (Bit Score: 95; Significance: 8e-47; HSPs: 65)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 95; E-Value: 8e-47
Query Start/End: Original strand, 27 - 151
Target Start/End: Complemental strand, 25289916 - 25289790
Alignment:
Q  27 acccatttggg-ttggtctagtggttgacttgggatcttggagtttgttcctccagaggtctcaggtttgattccctct-gtgccaatttcggtgggcta 124  Q
    ||||||||||| ||||||||||||||| ||||||||||||||||||| |||||||||||||||||||| |||||||||| ||||||||||||||||||||    
T  25289916 acccatttggggttggtctagtggttggcttgggatcttggagtttgctcctccagaggtctcaggttcgattccctctagtgccaatttcggtgggcta 25289817  T
Q  125 agtccatacagatcttgctctggcttt 151  Q
    |||||||||||| ||||||||||||||    
T  25289816 agtccatacagagcttgctctggcttt 25289790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 94; E-Value: 3e-46
Query Start/End: Original strand, 27 - 151
Target Start/End: Complemental strand, 15566700 - 15566575
Alignment:
Q  27 acccatttgggttggtctagtggttgacttgggatcttggagtttgttcctccagaggtctcaggtttgattccctct-gtgccaatttcggtgggctaa 125  Q
    ||||||||||||||| |||||||||| |||| |||||||||||||| |||||||||||||||||||| |||||||||| |||||||||||||||||||||    
T  15566700 acccatttgggttggcctagtggttggcttgagatcttggagtttgctcctccagaggtctcaggttcgattccctctagtgccaatttcggtgggctaa 15566601  T
Q  126 gtccatacagatcttgctctggcttt 151  Q
    ||||||||||| ||||||||||||||    
T  15566600 gtccatacagagcttgctctggcttt 15566575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 91; E-Value: 2e-44
Query Start/End: Original strand, 27 - 151
Target Start/End: Complemental strand, 30807355 - 30807229
Alignment:
Q  27 acccatttggg-ttggtctagtggttgacttgggatcttggagtttgttcctccagaggtctcaggtttgattccctct-gtgccaatttcggtgggcta 124  Q
    ||||||||||| |||| |||||||||| ||||||||||||||||||| |||||||||||||||||||| |||||||||| ||||||||||||||||||||    
T  30807355 acccatttggggttggcctagtggttggcttgggatcttggagtttgctcctccagaggtctcaggttcgattccctctggtgccaatttcggtgggcta 30807256  T
Q  125 agtccatacagatcttgctctggcttt 151  Q
    |||||||||||| ||||||||||||||    
T  30807255 agtccatacagagcttgctctggcttt 30807229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 91; E-Value: 2e-44
Query Start/End: Original strand, 27 - 151
Target Start/End: Original strand, 35492906 - 35493032
Alignment:
Q  27 acccatttggg-ttggtctagtggttgacttgggatcttggagtttgttcctccagaggtctcaggtttgattccctct-gtgccaatttcggtgggcta 124  Q
    ||||||||||| |||| |||||||||| ||||||||||||||||||| |||||||||||||||||||| |||||||||| ||||||||||||||||||||    
T  35492906 acccatttggggttggcctagtggttggcttgggatcttggagtttgctcctccagaggtctcaggttcgattccctctggtgccaatttcggtgggcta 35493005  T
Q  125 agtccatacagatcttgctctggcttt 151  Q
    |||||||||||| ||||||||||||||    
T  35493006 agtccatacagagcttgctctggcttt 35493032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 88; E-Value: 1e-42
Query Start/End: Original strand, 37 - 151
Target Start/End: Complemental strand, 52821826 - 52821711
Alignment:
Q  37 gttggtctagtggttgacttgggatcttggagtttgttcctccagaggtctcaggtttgattccctct-gtgccaatttcggtgggctaagtccatacag 135  Q
    ||||| |||||||||||||||||||||||||||||| |||||||||||||||||||| |||||||||| ||||||||||||||| |||||||||||||||    
T  52821826 gttggcctagtggttgacttgggatcttggagtttgctcctccagaggtctcaggttcgattccctctggtgccaatttcggtgagctaagtccatacag 52821727  T
Q  136 atcttgctctggcttt 151  Q
    | ||||||||||||||    
T  52821726 agcttgctctggcttt 52821711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 87; E-Value: 5e-42
Query Start/End: Original strand, 27 - 151
Target Start/End: Complemental strand, 8456352 - 8456226
Alignment:
Q  27 acccatttggg-ttggtctagtggttgacttgggatcttggagtttgttcctccagaggtctcaggtttgattccctct-gtgccaatttcggtgggcta 124  Q
    ||||||||||| |||| |||||||||| ||||||||||| ||||||| |||||||||||||||||||| |||||||||| ||||||||||||||||||||    
T  8456352 acccatttggggttggcctagtggttggcttgggatcttcgagtttgctcctccagaggtctcaggttcgattccctctggtgccaatttcggtgggcta 8456253  T
Q  125 agtccatacagatcttgctctggcttt 151  Q
    |||||||||||| ||||||||||||||    
T  8456252 agtccatacagagcttgctctggcttt 8456226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 87; E-Value: 5e-42
Query Start/End: Original strand, 27 - 151
Target Start/End: Original strand, 21362938 - 21363064
Alignment:
Q  27 acccatttggg-ttggtctagtggttgacttgggatcttggagtttgttcctccagaggtctcaggtttgattccctct-gtgccaatttcggtgggcta 124  Q
    ||||||||||| |||| |||||||||||||||||||||||||||||| |||||||||||||||||||| |||||||||| ||| |||||||||| |||||    
T  21362938 acccatttggggttggcctagtggttgacttgggatcttggagtttgctcctccagaggtctcaggttcgattccctctggtgtcaatttcggtaggcta 21363037  T
Q  125 agtccatacagatcttgctctggcttt 151  Q
    |||||||||||| ||||||||||||||    
T  21363038 agtccatacagagcttgctctggcttt 21363064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 87; E-Value: 5e-42
Query Start/End: Original strand, 38 - 151
Target Start/End: Original strand, 26108299 - 26108413
Alignment:
Q  38 ttggtctagtggttgacttgggatcttggagtttgttcctccagaggtctcaggtttgattccctct-gtgccaatttcggtgggctaagtccatacaga 136  Q
    |||| |||||||||| ||||||||||||||||||| |||||||||||||||||||| |||||||||| ||||||||||||||||||||||||||||||||    
T  26108299 ttggcctagtggttggcttgggatcttggagtttgctcctccagaggtctcaggttcgattccctctggtgccaatttcggtgggctaagtccatacaga 26108398  T
Q  137 tcttgctctggcttt 151  Q
     ||||||||||||||    
T  26108399 gcttgctctggcttt 26108413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 87; E-Value: 5e-42
Query Start/End: Original strand, 27 - 151
Target Start/End: Original strand, 40940820 - 40940946
Alignment:
Q  27 acccatttggg-ttggtctagtggttgacttgggatcttggagtttgttcctccagaggtctcaggtttgattccctct-gtgccaatttcggtgggcta 124  Q
    ||||||||||| ||||||||||||||| ||||||||||||||||||| |||||||||||||||||||| |||||||||| |||||||||||||||| |||    
T  40940820 acccatttggggttggtctagtggttggcttgggatcttggagtttgctcctccagaggtctcaggttcgattccctctggtgccaatttcggtggacta 40940919  T
Q  125 agtccatacagatcttgctctggcttt 151  Q
    |||||||||||| ||||||||| ||||    
T  40940920 agtccatacagagcttgctctgacttt 40940946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 87; E-Value: 5e-42
Query Start/End: Original strand, 27 - 151
Target Start/End: Original strand, 46576343 - 46576469
Alignment:
Q  27 acccatttggg-ttggtctagtggttgacttgggatcttggagtttgttcctccagaggtctcaggtttgattccctct-gtgccaatttcggtgggcta 124  Q
    ||||||||||| |||| |||||||||| ||||||||||||||||||| |||||||||||||||||||| |||||||||| ||||||||||| ||||||||    
T  46576343 acccatttggggttggcctagtggttggcttgggatcttggagtttgctcctccagaggtctcaggttcgattccctctggtgccaatttcagtgggcta 46576442  T
Q  125 agtccatacagatcttgctctggcttt 151  Q
    |||||||||||| ||||||||||||||    
T  46576443 agtccatacagagcttgctctggcttt 46576469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 83; E-Value: 1e-39
Query Start/End: Original strand, 27 - 151
Target Start/End: Complemental strand, 34492777 - 34492651
Alignment:
Q  27 acccatttggg-ttggtctagtggttgacttgggatcttggagtttgttcctccagaggtctcaggtttgattccctctg-tgccaatttcggtgggcta 124  Q
    ||||||||||| |||| |||||||||| ||||||||||||||||||| |||||||||||||||| ||| ||||||||||| ||||||||||| |||||||    
T  34492777 acccatttggggttggcctagtggttggcttgggatcttggagtttgctcctccagaggtctcatgttcgattccctctgctgccaatttcgttgggcta 34492678  T
Q  125 agtccatacagatcttgctctggcttt 151  Q
    |||||||||||| ||||||||||||||    
T  34492677 agtccatacagagcttgctctggcttt 34492651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 83; E-Value: 1e-39
Query Start/End: Original strand, 27 - 151
Target Start/End: Complemental strand, 45529956 - 45529830
Alignment:
Q  27 acccatttggg-ttggtctagtggttgacttgggatcttggagtttgttcctccagaggtctcaggtttgattccctct-gtgccaatttcggtgggcta 124  Q
    ||||||||||| |||| |||||||||| ||||||||||||||||||| |||||||||||||||||||| |||||||||| | |||||||||| |||||||    
T  45529956 acccatttggggttggcctagtggttggcttgggatcttggagtttgctcctccagaggtctcaggttcgattccctctggagccaatttcgatgggcta 45529857  T
Q  125 agtccatacagatcttgctctggcttt 151  Q
    |||||||||||| ||||||||||||||    
T  45529856 agtccatacagagcttgctctggcttt 45529830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 83; E-Value: 1e-39
Query Start/End: Original strand, 27 - 151
Target Start/End: Original strand, 48977383 - 48977509
Alignment:
Q  27 acccatttggg-ttggtctagtggttgacttgggatcttggagtttgttcctccagaggtctcaggtttgattccctct-gtgccaatttcggtgggcta 124  Q
    ||||||||||| |||| |||||||||||||||||||||||||||||| ||||||| |||||||||||| |||||| ||| ||||||||||||||||| ||    
T  48977383 acccatttggggttggcctagtggttgacttgggatcttggagtttgctcctccaaaggtctcaggttcgattccttctggtgccaatttcggtgggtta 48977482  T
Q  125 agtccatacagatcttgctctggcttt 151  Q
    |||||||||||| ||||||||||||||    
T  48977483 agtccatacagagcttgctctggcttt 48977509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 83; E-Value: 1e-39
Query Start/End: Original strand, 27 - 151
Target Start/End: Complemental strand, 49258464 - 49258338
Alignment:
Q  27 acccatttggg-ttggtctagtggttgacttgggatcttggagtttgttcctccagaggtctcaggtttgattccctct-gtgccaatttcggtgggcta 124  Q
    ||||||||||| || | |||||||||| |||||||||||| |||||| |||||||||||||||||||| |||||||||| ||||||||||||||||||||    
T  49258464 acccatttggggtttgcctagtggttggcttgggatcttgcagtttgctcctccagaggtctcaggttcgattccctctagtgccaatttcggtgggcta 49258365  T
Q  125 agtccatacagatcttgctctggcttt 151  Q
    |||||||||||| ||||||||||||||    
T  49258364 agtccatacagagcttgctctggcttt 49258338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 82; E-Value: 5e-39
Query Start/End: Original strand, 35 - 151
Target Start/End: Original strand, 25379765 - 25379882
Alignment:
Q  35 gggttggtctagtggttgacttgggatcttggagtttgttcctccagaggtctcaggtttgattccctct-gtgccaatttcggtgggctaagtccatac 133  Q
    ||||||| |||||||||| ||||||||||||||||||| |||||||||||||||||||| |||||| ||| ||||||||||||| |||||||||||||||    
T  25379765 gggttggcctagtggttggcttgggatcttggagtttgctcctccagaggtctcaggttcgattccttctagtgccaatttcggagggctaagtccatac 25379864  T
Q  134 agatcttgctctggcttt 151  Q
    ||| ||||||||||||||    
T  25379865 agagcttgctctggcttt 25379882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 81; E-Value: 2e-38
Query Start/End: Original strand, 48 - 151
Target Start/End: Complemental strand, 10083999 - 10083895
Alignment:
Q  48 ggttgacttgggatcttggagtttgttcctccagaggtctcaggtttgattccctct-gtgccaatttcggtgggctaagtccatacagatcttgctctg 146  Q
    ||||| ||||||||||||||||||| ||||||||||| ||||||||||||||||||| |||||||||||||||||||||||||||||||| |||||||||    
T  10083999 ggttggcttgggatcttggagtttgctcctccagagggctcaggtttgattccctctagtgccaatttcggtgggctaagtccatacagagcttgctctg 10083900  T
Q  147 gcttt 151  Q
    |||||    
T  10083899 gcttt 10083895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 81; E-Value: 2e-38
Query Start/End: Original strand, 48 - 151
Target Start/End: Complemental strand, 10190922 - 10190818
Alignment:
Q  48 ggttgacttgggatcttggagtttgttcctccagaggtctcaggtttgattccctct-gtgccaatttcggtgggctaagtccatacagatcttgctctg 146  Q
    ||||| ||||||||||||||||||| ||||||||||| ||||||||||||||||||| |||||||||||||||||||||||||||||||| |||||||||    
T  10190922 ggttggcttgggatcttggagtttgctcctccagagggctcaggtttgattccctctagtgccaatttcggtgggctaagtccatacagagcttgctctg 10190823  T
Q  147 gcttt 151  Q
    |||||    
T  10190822 gcttt 10190818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 80; E-Value: 7e-38
Query Start/End: Original strand, 37 - 151
Target Start/End: Original strand, 26174119 - 26174234
Alignment:
Q  37 gttggtctagtggttgacttgggatcttggagtttgttcctccagaggtctcaggtttgattccctct-gtgccaatttcggtgggctaagtccatacag 135  Q
    ||||| |||||||||| ||||||||||||||||||| |||||||||||||||||||| |||| ||||| ||||||||||||||||| |||||||||||||    
T  26174119 gttggcctagtggttggcttgggatcttggagtttgctcctccagaggtctcaggttcgatttcctctggtgccaatttcggtgggttaagtccatacag 26174218  T
Q  136 atcttgctctggcttt 151  Q
    | ||||||||||||||    
T  26174219 agcttgctctggcttt 26174234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 79; E-Value: 3e-37
Query Start/End: Original strand, 27 - 151
Target Start/End: Complemental strand, 18177089 - 18176963
Alignment:
Q  27 acccatttggg-ttggtctagtggttgacttgggatcttggagtttgttcctccagaggtctcaggtttgattccctct-gtgccaatttcggtgggcta 124  Q
    ||||||||||| |||| ||||||||||||||| |||||||||||||| || ||||||||| ||||||| |||||||||| |||||||||||||||| |||    
T  18177089 acccatttggggttggcctagtggttgacttgagatcttggagtttgctcttccagaggtatcaggttcgattccctctggtgccaatttcggtggacta 18176990  T
Q  125 agtccatacagatcttgctctggcttt 151  Q
    |||||||||||| ||||||||||||||    
T  18176989 agtccatacagagcttgctctggcttt 18176963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 79; E-Value: 3e-37
Query Start/End: Original strand, 27 - 151
Target Start/End: Complemental strand, 40133651 - 40133525
Alignment:
Q  27 acccatttggg-ttggtctagtggttgacttgggatcttggagtttgttcctccagaggtctcaggtttgattccctct-gtgccaatttcggtgggcta 124  Q
    ||||||||||| |||| |||||||||| |||||||| |||||||||| ||||||| |||||||||||| |||||||||| ||| ||||||||||||||||    
T  40133651 acccatttggggttggcctagtggttggcttgggattttggagtttgctcctccaaaggtctcaggttcgattccctctggtgtcaatttcggtgggcta 40133552  T
Q  125 agtccatacagatcttgctctggcttt 151  Q
    |||||||||||| ||||||||||||||    
T  40133551 agtccatacagagcttgctctggcttt 40133525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 78; E-Value: 1e-36
Query Start/End: Original strand, 35 - 151
Target Start/End: Complemental strand, 53424369 - 53424252
Alignment:
Q  35 gggttggtctagtggttgacttgggatcttggagtttgttcctccagaggtctcaggtttgattccctct-gtgccaatttcggtgggctaagtccatac 133  Q
    ||||||| |||||||||| ||||||||||||||||||| |||||||||||||||||||| |||||||| | |||||||||||||||||||||||||||||    
T  53424369 gggttggcctagtggttggcttgggatcttggagtttgctcctccagaggtctcaggttcgattccctttggtgccaatttcggtgggctaagtccatac 53424270  T
Q  134 agatcttgctctggcttt 151  Q
    |||  ||||| |||||||    
T  53424269 agagtttgctatggcttt 53424252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 76; E-Value: 2e-35
Query Start/End: Original strand, 43 - 149
Target Start/End: Complemental strand, 53234095 - 53233988
Alignment:
Q  43 ctagtggttgacttgggatcttggagtttgttcctccagaggtctcaggtttgattccctct-gtgccaatttcggtgggctaagtccatacagatcttg 141  Q
    |||||||||| ||||||||||||||||||| ||||||||| |||||||||| ||||| |||| |||||||||||||||||||||||||||||||| ||||    
T  53234095 ctagtggttggcttgggatcttggagtttgctcctccagaagtctcaggttcgattctctctggtgccaatttcggtgggctaagtccatacagagcttg 53233996  T
Q  142 ctctggct 149  Q
    ||||||||    
T  53233995 ctctggct 53233988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 75; E-Value: 7e-35
Query Start/End: Original strand, 27 - 151
Target Start/End: Complemental strand, 7470417 - 7470291
Alignment:
Q  27 acccatttggg-ttggtctagtggttgacttgggatcttggagtttgttcctccagaggtctcaggtttgattccctct-gtgccaatttcggtgggcta 124  Q
    ||||||||||| || | ||||||||||||||| |||||||||||||| ||||||| |||||||||||| ||||||||||  |||||||||||||||||||    
T  7470417 acccatttggggtttgcctagtggttgacttgagatcttggagtttgctcctccaaaggtctcaggttcgattccctctaatgccaatttcggtgggcta 7470318  T
Q  125 agtccatacagatcttgctctggcttt 151  Q
    ||| |||||||| ||||||||||||||    
T  7470317 agttcatacagagcttgctctggcttt 7470291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 75; E-Value: 7e-35
Query Start/End: Original strand, 27 - 151
Target Start/End: Original strand, 30257619 - 30257745
Alignment:
Q  27 acccatttggg-ttggtctagtggttgacttgggatcttggagtttgttcctccagaggtctcaggtttgattccctct-gtgccaatttcggtgggcta 124  Q
    ||||||||||| |||| |||||||||| ||||||||||||||||||| ||||||| |||||||||||| |||||||| | |||||||||||| ||| |||    
T  30257619 acccatttggggttggcctagtggttggcttgggatcttggagtttgctcctccaaaggtctcaggttcgattccctttggtgccaatttcgatggacta 30257718  T
Q  125 agtccatacagatcttgctctggcttt 151  Q
    |||||||||||| ||||||||||||||    
T  30257719 agtccatacagagcttgctctggcttt 30257745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 75; E-Value: 7e-35
Query Start/End: Original strand, 27 - 151
Target Start/End: Complemental strand, 31538040 - 31537914
Alignment:
Q  27 acccatttggg-ttggtctagtggttgacttgggatcttggagtttgttcctccagaggtctcaggtttgattccctct-gtgccaatttcggtgggcta 124  Q
    ||||||||||| |||| |||||||||| ||| ||||||||||||||| |||||||||||||||| |||||||||||||| |||||||||| |||||||||    
T  31538040 acccatttggggttggcctagtggttggcttaggatcttggagtttgctcctccagaggtctcatgtttgattccctctggtgccaattttggtgggcta 31537941  T
Q  125 agtccatacagatcttgctctggcttt 151  Q
    |||| ||||||| ||| ||||||||||    
T  31537940 agtctatacagagcttactctggcttt 31537914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 75; E-Value: 7e-35
Query Start/End: Original strand, 27 - 151
Target Start/End: Complemental strand, 45272618 - 45272492
Alignment:
Q  27 acccatttggg-ttggtctagtggttgacttgggatcttggagtttgttcctccagaggtctcaggtttgattccctct-gtgccaatttcggtgggcta 124  Q
    ||||||||||| |||| ||||| |||| ||||||||||||||||||| ||||||||| ||||||| || |||||||||| ||||||||||||||||||||    
T  45272618 acccatttggggttggcctagtcgttggcttgggatcttggagtttgctcctccagatgtctcagtttcgattccctctggtgccaatttcggtgggcta 45272519  T
Q  125 agtccatacagatcttgctctggcttt 151  Q
    ||||||||| || ||||||||||||||    
T  45272518 agtccatacggagcttgctctggcttt 45272492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 74; E-Value: 3e-34
Query Start/End: Original strand, 27 - 151
Target Start/End: Original strand, 32151420 - 32151545
Alignment:
Q  27 acccatttgggttggtctagtggttgacttgggatcttggagtttgttcctccagaggtctcaggtttgattccctct-gtgccaatttcggtgggctaa 125  Q
    ||||||||||||||| |||||||||||||||||||||||||||||| ||||||| |||| |||  || ||||| |||| |||||||||||||||||||||    
T  32151420 acccatttgggttggcctagtggttgacttgggatcttggagtttgctcctccaaaggtttcaaattcgattctctctagtgccaatttcggtgggctaa 32151519  T
Q  126 gtccatacagatcttgctctggcttt 151  Q
    |  |||||||| ||||||||||||||    
T  32151520 gctcatacagagcttgctctggcttt 32151545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 68; E-Value: 1e-30
Query Start/End: Original strand, 27 - 132
Target Start/End: Complemental strand, 7485727 - 7485620
Alignment:
Q  27 acccatttggg-ttggtctagtggttgacttgggatcttggagtttgttcctccagaggtctcaggtttgattccctctg-tgccaatttcggtgggcta 124  Q
    ||||||||||| ||||  ||||||||||||||||||||||||||||| ||||||| |||||||||||| ||||||||||| |||||||||||||||||||    
T  7485727 acccatttggggttggcatagtggttgacttgggatcttggagtttgctcctccaaaggtctcaggttcgattccctctgatgccaatttcggtgggcta 7485628  T
Q  125 agtccata 132  Q
    ||| ||||    
T  7485627 agttcata 7485620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 67; E-Value: 4e-30
Query Start/End: Original strand, 27 - 151
Target Start/End: Complemental strand, 29915471 - 29915345
Alignment:
Q  27 acccattt-gggttggtctagtggttgacttgggatcttggagtttgttcctccagaggtctcaggtttgattccctct-gtgccaatttcggtgggcta 124  Q
    |||||||| ||||||  ||| |||||||||||||||||||||||||| |||||||||||||||||||| |||| | ||| |||||| |||||||||||||    
T  29915471 acccatttagggttgacctaatggttgacttgggatcttggagtttgctcctccagaggtctcaggttcgatttcttctggtgccattttcggtgggcta 29915372  T
Q  125 agtccatacagatcttgctctggcttt 151  Q
    ||| |||||||| ||||| ||||||||    
T  29915371 agtacatacagagcttgccctggcttt 29915345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 67; E-Value: 4e-30
Query Start/End: Original strand, 27 - 151
Target Start/End: Complemental strand, 29964624 - 29964498
Alignment:
Q  27 acccattt-gggttggtctagtggttgacttgggatcttggagtttgttcctccagaggtctcaggtttgattccctct-gtgccaatttcggtgggcta 124  Q
    |||||||| ||||||  ||| |||||||||||||||||||||||||| |||||||||||||||||||| |||| | ||| |||||| |||||||||||||    
T  29964624 acccatttagggttgacctaatggttgacttgggatcttggagtttgctcctccagaggtctcaggttcgatttcttctggtgccattttcggtgggcta 29964525  T
Q  125 agtccatacagatcttgctctggcttt 151  Q
    ||| |||||||| ||||| ||||||||    
T  29964524 agtacatacagagcttgccctggcttt 29964498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 67; E-Value: 4e-30
Query Start/End: Original strand, 54 - 151
Target Start/End: Complemental strand, 39042026 - 39041928
Alignment:
Q  54 cttgggatcttggagtttgttcctccagaggtctcaggtttgattccctctg-tgccaatttcggtgggctaagtccatacagatcttgctctggcttt 151  Q
    ||||||||||||||||||| |||||||||||||||| ||| ||||| ||||| |||||||||||||||||||||||||| |||| ||||||||||||||    
T  39042026 cttgggatcttggagtttgctcctccagaggtctcaagttcgattctctctggtgccaatttcggtgggctaagtccatgcagagcttgctctggcttt 39041928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 67; E-Value: 4e-30
Query Start/End: Original strand, 27 - 151
Target Start/End: Complemental strand, 52455851 - 52455725
Alignment:
Q  27 acccatttggg-ttggtctagtggttgacttgggatcttggagtttgttcctccagaggtctcaggtttgattccctct-gtgccaatttcggtgggcta 124  Q
    ||||||||||| |||| |||||||||| || |||||||||||||||| |||||||||||||||||||| |||||||||| |||||||||| | |||||||    
T  52455851 acccatttggggttggcctagtggttggctagggatcttggagtttgctcctccagaggtctcaggttcgattccctctggtgccaattttgatgggcta 52455752  T
Q  125 agtccatacagatcttgctctggcttt 151  Q
    |||| | ||||| ||||||||| ||||    
T  52455751 agtctacacagagcttgctctgacttt 52455725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 66; E-Value: 2e-29
Query Start/End: Original strand, 35 - 151
Target Start/End: Complemental strand, 25344250 - 25344133
Alignment:
Q  35 gggttggtctagtggttgacttgggatcttggagtttgttcctccagaggtctcaggtttgattccctct-gtgccaatttcggtgggctaagtccatac 133  Q
    ||||||| |||||||||||||||||||||| ||||||| |||||||||| |||||||||||||||||| | ||| ||||||  |||| ||||||||||||    
T  25344250 gggttggcctagtggttgacttgggatcttcgagtttgctcctccagagatctcaggtttgattccctttggtgtcaatttttgtggtctaagtccatac 25344151  T
Q  134 agatcttgctctggcttt 151  Q
    |||  |||||||||||||    
T  25344150 agagtttgctctggcttt 25344133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 63; E-Value: 1e-27
Query Start/End: Original strand, 27 - 151
Target Start/End: Original strand, 38732961 - 38733087
Alignment:
Q  27 acccatttg-ggttggtctagtggttgacttgggatcttggagtttgttcctccagaggtctcaggtttgattccctctg-tgccaatttcggtgggcta 124  Q
    ||||||||| |||||| ||| |||||||||||| |||||||||||||||||||||||||||||||||  ||||| ||||| || |||||||||||||||     
T  38732961 acccatttgaggttgggctaatggttgacttggaatcttggagtttgttcctccagaggtctcaggtccgattctctctgttgtcaatttcggtgggctg 38733060  T
Q  125 agtccatacagatcttgctctggcttt 151  Q
    ||| ||||||||  |||||||| ||||    
T  38733061 agttcatacagaggttgctctgacttt 38733087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 54; E-Value: 2e-22
Query Start/End: Original strand, 35 - 151
Target Start/End: Original strand, 11390606 - 11390723
Alignment:
Q  35 gggttggtctagtggttgacttgggatcttggagtttgttcctccagaggtctcaggtttgattccctct-gtgccaatttcggtgggctaagtccatac 133  Q
    ||||||| ||||||||||  ||| |||||||||||||  ||||||| || | |||||||||||| ||||| ||| |||||| ||||||||||||||||||    
T  11390606 gggttggcctagtggttggtttgagatcttggagttttctcctccaaagatttcaggtttgatttcctctggtgtcaattttggtgggctaagtccatac 11390705  T
Q  134 agatcttgctctggcttt 151  Q
    ||| ||||||||| ||||    
T  11390706 agagcttgctctgtcttt 11390723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 54; E-Value: 2e-22
Query Start/End: Original strand, 27 - 127
Target Start/End: Original strand, 19857048 - 19857148
Alignment:
Q  27 acccatttgggttggtctagtggttgacttgggatcttggagtttgttcctccagaggtctcaggtttgattccctct-gtgccaatttcggtgggctaa 125  Q
    ||||||||||||||| || ||||||| ||||| ||||||||||||| ||||||||| |||||||||| |||||||| | ||| |||||||||||||||||    
T  19857048 acccatttgggttggcctggtggttggcttgg-atcttggagtttgctcctccagatgtctcaggttcgattccctttggtgtcaatttcggtgggctaa 19857146  T
Q  126 gt 127  Q
    ||    
T  19857147 gt 19857148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 53; E-Value: 9e-22
Query Start/End: Original strand, 60 - 151
Target Start/End: Original strand, 1692863 - 1692955
Alignment:
Q  60 atcttggagtttgttcctccagaggtctcaggtttgattccctct-gtgccaatttcggtgggctaagtccatacagatcttgctctggcttt 151  Q
    ||||||||||||| |||||||||||||||||||| |||||| | | ||| |||||||||||| ||||||| ||||||| ||||||||||||||    
T  1692863 atcttggagtttgctcctccagaggtctcaggttcgattccatttagtgtcaatttcggtggactaagtctatacagaacttgctctggcttt 1692955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 53; E-Value: 9e-22
Query Start/End: Original strand, 32 - 151
Target Start/End: Complemental strand, 53288908 - 53288788
Alignment:
Q  32 tttgggttggtctagtggttgacttgggatcttggagtttgttcctccagaggtctcaggtttgattccctctg-tgccaatttcggtgggctaagtcca 130  Q
    |||| ||||| | ||||||||  ||||||| || ||||||| ||||||| |||||||||| | ||||||||||| ||||||||||||||| |||||||||    
T  53288908 tttgcgttggccaagtggttggtttgggatattagagtttgctcctccaaaggtctcaggctcgattccctctggtgccaatttcggtggactaagtcca 53288809  T
Q  131 tacagatcttgctctggcttt 151  Q
    |||| | |||||| |||||||    
T  53288808 tacaaagcttgctttggcttt 53288788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 47; E-Value: 4e-18
Query Start/End: Original strand, 74 - 151
Target Start/End: Complemental strand, 8097433 - 8097355
Alignment:
Q  74 tcctccagaggtctcaggtttgattccctct-gtgccaatttcggtgggctaagtccatacagatcttgctctggcttt 151  Q
    ||||||||||| |||||||| |||||||||| |||| ||||||| ||||||||||||||||||| | ||||||||||||    
T  8097433 tcctccagaggcctcaggttcgattccctcttgtgctaatttcgatgggctaagtccatacagagcatgctctggcttt 8097355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 47; E-Value: 4e-18
Query Start/End: Original strand, 38 - 151
Target Start/End: Complemental strand, 14343478 - 14343364
Alignment:
Q  38 ttggtctagtggttgacttgggatcttggagtttgttcctccagaggtctcaggtttgattccctctgt-gccaatttcggtgggctaagtccatacaga 136  Q
    |||||||| ||||||  ||| |||||||||||||| ||||||||| ||||||| || |||| | ||||  |||||||||  |||||||||||||||||||    
T  14343478 ttggtctattggttggtttgagatcttggagtttgctcctccagatgtctcagattcgatttcatctgacgccaatttcaatgggctaagtccatacaga 14343379  T
Q  137 tcttgctctggcttt 151  Q
     ||||||||| ||||    
T  14343378 acttgctctgccttt 14343364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 46; E-Value: 1e-17
Query Start/End: Original strand, 27 - 134
Target Start/End: Original strand, 55287798 - 55287907
Alignment:
Q  27 acccatttggg-ttggtctagtggttgacttgggatcttggagtttgttcctccagaggtctcaggtttgattccctct-gtgccaatttcggtgggcta 124  Q
    ||||||||||| ||||  ||||||||| ||||| ||||| ||||||| |||| ||||||| ||||||| |||||||||| |||||||||| | |||||||    
T  55287798 acccatttggggttggcatagtggttggcttggaatcttagagtttgctccttcagaggtttcaggttcgattccctctggtgccaattttgatgggcta 55287897  T
Q  125 agtccataca 134  Q
     |||||||||    
T  55287898 ggtccataca 55287907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 45; E-Value: 6e-17
Query Start/End: Original strand, 76 - 151
Target Start/End: Complemental strand, 2511449 - 2511373
Alignment:
Q  76 ctccagaggtctcaggtttgattccctctg-tgccaatttcggtgggctaagtccatacagatcttgctctggcttt 151  Q
    ||||| |||||||||||| ||||||||||| |||||||||||||||||||||| |||||||| || |||||| ||||    
T  2511449 ctccataggtctcaggttcgattccctctggtgccaatttcggtgggctaagttcatacagagctcgctctgacttt 2511373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 44; E-Value: 2e-16
Query Start/End: Original strand, 63 - 145
Target Start/End: Original strand, 51532821 - 51532904
Alignment:
Q  63 ttggagtttgttcctccagaggtctcaggtttgattccctctg-tgccaatttcggtgggctaagtccatacagatcttgctct 145  Q
    |||||||||| | ||||| |||||||| ||| ||||| ||||  ||||||||||||||||||||||||||||||| ||||||||    
T  51532821 ttggagtttgcttctccaaaggtctcatgttcgattctctctaatgccaatttcggtgggctaagtccatacagagcttgctct 51532904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 43; E-Value: 9e-16
Query Start/End: Original strand, 50 - 151
Target Start/End: Complemental strand, 8958214 - 8958112
Alignment:
Q  50 ttgacttgggatcttggagtttgttcctccagaggtctcaggtttgattccctctg-tgccaatttcggtgggctaagtccatacagatcttgctctggc 148  Q
    |||||||||||||||||||| || |||| || |||||| | ||| |||| |||||| || |||||| ||||||||||||||||||| | |||||||| ||    
T  8958214 ttgacttgggatcttggagtctgctccttcaaaggtcttatgttcgatttcctctggtgtcaattttggtgggctaagtccatacaaagcttgctctagc 8958115  T
Q  149 ttt 151  Q
    |||    
T  8958114 ttt 8958112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 43; E-Value: 9e-16
Query Start/End: Original strand, 45 - 134
Target Start/End: Original strand, 49167070 - 49167160
Alignment:
Q  45 agtggttgacttgggatcttggagtttgttcctccagaggtctcaggtttgattccctct-gtgccaatttcggtgggctaagtccataca 134  Q
    |||||||| |||| |||||||||||||| ||||||| || | ||||||| ||||| |||| ||| |||||||||||| |||||||||||||    
T  49167070 agtggttggcttgagatcttggagtttgctcctccaaagatatcaggttcgattctctctggtgtcaatttcggtggactaagtccataca 49167160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 42; E-Value: 0.000000000000003
Query Start/End: Original strand, 35 - 151
Target Start/End: Original strand, 4462637 - 4462754
Alignment:
Q  35 gggttggtctagtggttgacttgggatcttggagtttgttcctccagaggtctcaggtttgattccctct-gtgccaatttcggtgggctaagtccatac 133  Q
    ||||||| |||||||||| |||| |||||||||||||| | || || | |||||| ||| |||||||||| |  ||||||||| |||||||||| |||||    
T  4462637 gggttggcctagtggttggcttgagatcttggagtttgctacttcaaaagtctcatgttcgattccctctggcaccaatttcgatgggctaagttcatac 4462736  T
Q  134 agatcttgctctggcttt 151  Q
    ||| ||| |||| |||||    
T  4462737 agagcttactctagcttt 4462754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 42; E-Value: 0.000000000000003
Query Start/End: Original strand, 27 - 134
Target Start/End: Original strand, 50582987 - 50583095
Alignment:
Q  27 acccatttggg-ttggtctagtggttgacttgggatcttggagtttgttcctccagaggtctcaggtttgattccctctg-tgccaatttcggtgggcta 124  Q
    ||||||||||| |||| ||||||||||  |||||||||||||||||| |||||   |||| ||||||| |||| |||||| ||||||||||| |||| ||    
T  50582987 acccatttggggttggcctagtggttggtttgggatcttggagtttgctcctcttaaggtttcaggttcgatttcctctgttgccaatttcgttggg-ta 50583085  T
Q  125 agtccataca 134  Q
    ||||||||||    
T  50583086 agtccataca 50583095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 41; E-Value: 0.00000000000001
Query Start/End: Original strand, 33 - 101
Target Start/End: Original strand, 9853618 - 9853686
Alignment:
Q  33 ttgggttggtctagtggttgacttgggatcttggagtttgttcctccagaggtctcaggtttgattccc 101  Q
    |||| ||||||||||||||   |||||||||||||||||| ||||||| |||||||||||| |||||||    
T  9853618 ttggtttggtctagtggttagtttgggatcttggagtttgctcctccaaaggtctcaggttcgattccc 9853686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 40; E-Value: 0.00000000000005
Query Start/End: Original strand, 58 - 132
Target Start/End: Original strand, 25017542 - 25017617
Alignment:
Q  58 ggatcttggagtttgttcctccagaggtctcaggtttgattccctct-gtgccaatttcggtgggctaagtccata 132  Q
    ||||||||||||||| ||||||| || ||| ||||| |||||| ||| ||| ||||||||||||||||||||||||    
T  25017542 ggatcttggagtttgctcctccaaagatcttaggttcgattccatctagtgtcaatttcggtgggctaagtccata 25017617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 39; E-Value: 0.0000000000002
Query Start/End: Original strand, 27 - 115
Target Start/End: Complemental strand, 4252598 - 4252508
Alignment:
Q  27 acccatttggg-ttggtctagtggttgacttgggatcttggagtttgttcctccagaggtctcaggtttgattccctct-gtgccaatttc 115  Q
    ||||||||||| |||| |||||||||| |||| ||||||||||| || |||||   |||||||| |||||||||||||| |||||||||||    
T  4252598 acccatttggggttggcctagtggttggcttgagatcttggagtgtgctcctctcaaggtctcaagtttgattccctctggtgccaatttc 4252508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 39; E-Value: 0.0000000000002
Query Start/End: Original strand, 27 - 88
Target Start/End: Original strand, 9842916 - 9842978
Alignment:
Q  27 acccatttggg-ttggtctagtggttgacttgggatcttggagtttgttcctccagaggtctc 88  Q
    ||||||||||| |||||||||||||||  |||||||||||||||||  |||||||||||||||    
T  9842916 acccatttggggttggtctagtggttggtttgggatcttggagttttctcctccagaggtctc 9842978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 38; E-Value: 0.0000000000008
Query Start/End: Original strand, 55 - 151
Target Start/End: Complemental strand, 33398641 - 33398544
Alignment:
Q  55 ttgggatcttggagtttgttcctccagaggtctcaggtttgattccctct-gtgccaatttcggtgggctaagtccatacagatcttgctctggcttt 151  Q
    ||||||||||| |||||| || || | || ||||| ||| |||||||||| |||||||||| |||||| || ||||||||||| |||||||| |||||    
T  33398641 ttgggatcttgtagtttgctcttctaaagatctcaagttcgattccctctagtgccaattttggtgggttatgtccatacagagcttgctctagcttt 33398544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 36; E-Value: 0.00000000001
Query Start/End: Original strand, 49 - 135
Target Start/End: Original strand, 26158836 - 26158922
Alignment:
Q  49 gttgacttgggatcttggagtttgttcctccagaggtctcaggtttgattccctct-gtgccaatttcggtgggctaagtccatacag 135  Q
    |||| |||| ||||||||||| || |||||   ||||||||||||| ||||||| | ||||||||||||||||| |||||||||||||    
T  26158836 gttggcttgagatcttggagtgtgctcctctcaaggtctcaggtttcattccctttggtgccaatttcggtggg-taagtccatacag 26158922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 35; E-Value: 0.00000000005
Query Start/End: Original strand, 95 - 151
Target Start/End: Original strand, 1242037 - 1242095
Alignment:
Q  95 gattccctctg-tgccaatttcggtgggctaagtccatacagatc-ttgctctggcttt 151  Q
    ||||||||||| ||||||||| ||||||||||||||||||||| | |||||||||||||    
T  1242037 gattccctctggtgccaattttggtgggctaagtccatacagagctttgctctggcttt 1242095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 33; E-Value: 0.0000000008
Query Start/End: Original strand, 84 - 143
Target Start/End: Complemental strand, 17579280 - 17579220
Alignment:
Q  84 gtctcaggtttgattccctct-gtgccaatttcggtgggctaagtccatacagatcttgct 143  Q
    ||||||||||||||| ||||| |||  ||||| ||||||||||||||||||||| ||||||    
T  17579280 gtctcaggtttgatttcctctagtgttaattttggtgggctaagtccatacagagcttgct 17579220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 32; E-Value: 0.000000003
Query Start/End: Original strand, 82 - 124
Target Start/End: Original strand, 40777071 - 40777114
Alignment:
Q  82 aggtctcaggtttgattccctct-gtgccaatttcggtgggcta 124  Q
    |||||||||||||||||| |||| ||||||||||||||||||||    
T  40777071 aggtctcaggtttgattctctctagtgccaatttcggtgggcta 40777114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 30; E-Value: 0.00000005
Query Start/End: Original strand, 43 - 120
Target Start/End: Complemental strand, 50731418 - 50731341
Alignment:
Q  43 ctagtggttgacttgggatcttggagtttgttcctccagaggtctcaggtttgattccctctgtgccaatttcggtgg 120  Q
    ||||||||||||||| ||||||| ||| || |||||   |||||||| |||||||||| |  || |||||||||||||    
T  50731418 ctagtggttgacttgagatcttgaagtgtgctcctctcaaggtctcaagtttgattccgttggtaccaatttcggtgg 50731341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 30; E-Value: 0.00000005
Query Start/End: Original strand, 43 - 120
Target Start/End: Original strand, 50781436 - 50781513
Alignment:
Q  43 ctagtggttgacttgggatcttggagtttgttcctccagaggtctcaggtttgattccctctgtgccaatttcggtgg 120  Q
    ||||||||||||||| ||||||| ||| || |||||   |||||||| |||||||||| |  || |||||||||||||    
T  50781436 ctagtggttgacttgagatcttgaagtgtgctcctctcaaggtctcaagtttgattccgttggtaccaatttcggtgg 50781513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 29; E-Value: 0.0000002
Query Start/End: Original strand, 30 - 125
Target Start/End: Complemental strand, 4844583 - 4844484
Alignment:
Q  30 catttgggttggtctagtggt--tgacttgggatcttggagtttgttcctcc-agaggtctcaggtttgattccct-ctgtgccaatttcggtgggctaa 125  Q
    ||||||||||||||| |||||  ||||||||||||| ||||| || ||||||  ||||||||||| | ||||| || | ||||||||||  |||||||||    
T  4844583 catttgggttggtctggtggtattgacttgggatctgggagtgtgctcctcctcgaggtctcaggatcgattctctccggtgccaatttgtgtgggctaa 4844484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 29; E-Value: 0.0000002
Query Start/End: Original strand, 30 - 125
Target Start/End: Complemental strand, 4870279 - 4870180
Alignment:
Q  30 catttgggttggtctagtggt--tgacttgggatcttggagtttgttcctcc-agaggtctcaggtttgattccct-ctgtgccaatttcggtgggctaa 125  Q
    ||||||||||||||| |||||  ||||||||||||| ||||| || ||||||  ||||||||||| | ||||| || | ||||||||||  |||||||||    
T  4870279 catttgggttggtctggtggtattgacttgggatctgggagtgtgctcctcctcgaggtctcaggatcgattctctccggtgccaatttgtgtgggctaa 4870180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 29; E-Value: 0.0000002
Query Start/End: Original strand, 36 - 64
Target Start/End: Original strand, 24703709 - 24703737
Alignment:
Q  36 ggttggtctagtggttgacttgggatctt 64  Q
    |||||||||||||||||||||||||||||    
T  24703709 ggttggtctagtggttgacttgggatctt 24703737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 29; E-Value: 0.0000002
Query Start/End: Original strand, 26 - 136
Target Start/End: Original strand, 50162037 - 50162148
Alignment:
Q  26 tacccatttgggttggtcta-gtggttgacttgggatcttggagtttgttcctccagaggtctcaggtttgattccctct-gtgccaatttcggtgggct 123  Q
    |||||||||||||| | ||| |||||||||||||||||||| |||  | |||||   ||||||||| || ||||||||||  ||||||||| | || ||     
T  50162037 tacccatttgggtttgactaagtggttgacttgggatcttgaagtgcgctcctctcaaggtctcagattcgattccctctattgccaattttgatgtgc- 50162135  T
Q  124 aagtccatacaga 136  Q
    |||||||||||||    
T  50162136 aagtccatacaga 50162148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 28; E-Value: 0.0000008
Query Start/End: Original strand, 105 - 151
Target Start/End: Original strand, 1178247 - 1178293
Alignment:
Q  105 gtgccaatttcggtgggctaagtccatacagatc-ttgctctggcttt 151  Q
    |||||||||||||||||| ||||||||||||| | |||||||||||||    
T  1178247 gtgccaatttcggtgggc-aagtccatacagaactttgctctggcttt 1178293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 28; E-Value: 0.0000008
Query Start/End: Original strand, 27 - 99
Target Start/End: Original strand, 47079702 - 47079776
Alignment:
Q  27 acccatttgggttggtctagtggt--tgacttgggatcttggagtttgttcctccagaggtctcaggtttgattc 99  Q
    ||||| |||||||||||| |||||  || |||||||||||||| | ||||||||   |||||| |||||||||||    
T  47079702 acccacttgggttggtctggtggtgttggcttgggatcttggaatgtgttcctcttaaggtcttaggtttgattc 47079776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 28; E-Value: 0.0000008
Query Start/End: Original strand, 85 - 151
Target Start/End: Complemental strand, 48972854 - 48972787
Alignment:
Q  85 tctcaggtttgattccctctg-tgccaatttcggtgggctaagtccatacagatcttgctctggcttt 151  Q
    ||||||||| ||||||||||| ||||||||||| |||| ||||| |||| |||  |||||||| ||||    
T  48972854 tctcaggttcgattccctctggtgccaatttcgatgggttaagttcatatagagtttgctctgacttt 48972787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 91; Significance: 2e-44; HSPs: 47)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 91; E-Value: 2e-44
Query Start/End: Original strand, 27 - 151
Target Start/End: Complemental strand, 34237857 - 34237731
Alignment:
Q  27 acccatttggg-ttggtctagtggttgacttgggatcttggagtttgttcctccagaggtctcaggtttgattccctct-gtgccaatttcggtgggcta 124  Q
    ||||||||||| |||| |||||||||| ||||||||||||||||||| |||||||||||||||||||| |||||||||| ||||||||||||||||||||    
T  34237857 acccatttggggttggcctagtggttggcttgggatcttggagtttgctcctccagaggtctcaggttcgattccctctggtgccaatttcggtgggcta 34237758  T
Q  125 agtccatacagatcttgctctggcttt 151  Q
    |||||||||||| ||||||||||||||    
T  34237757 agtccatacagagcttgctctggcttt 34237731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 87; E-Value: 5e-42
Query Start/End: Original strand, 27 - 151
Target Start/End: Complemental strand, 3734825 - 3734699
Alignment:
Q  27 acccatttggg-ttggtctagtggttgacttgggatcttggagtttgttcctccagaggtctcaggtttgattccctct-gtgccaatttcggtgggcta 124  Q
    ||||||||||| |||| |||||||||| ||||||||||||||||||| ||||||| |||||||||||| |||||||||| ||||||||||||||||||||    
T  3734825 acccatttggggttggcctagtggttggcttgggatcttggagtttgctcctccaaaggtctcaggttcgattccctctggtgccaatttcggtgggcta 3734726  T
Q  125 agtccatacagatcttgctctggcttt 151  Q
    |||||||||||| ||||||||||||||    
T  3734725 agtccatacagagcttgctctggcttt 3734699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 87; E-Value: 5e-42
Query Start/End: Original strand, 27 - 151
Target Start/End: Original strand, 4718644 - 4718770
Alignment:
Q  27 acccatttggg-ttggtctagtggttgacttgggatcttggagtttgttcctccagaggtctcaggtttgattccctct-gtgccaatttcggtgggcta 124  Q
    ||||||||||| |||| |||||||||| ||||||||||||||||||| |||| ||||||||||||||| |||||||||| ||||||||||||||||||||    
T  4718644 acccatttggggttggcctagtggttggcttgggatcttggagtttgctccttcagaggtctcaggttcgattccctctggtgccaatttcggtgggcta 4718743  T
Q  125 agtccatacagatcttgctctggcttt 151  Q
    |||||||||||| ||||||||||||||    
T  4718744 agtccatacagagcttgctctggcttt 4718770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 87; E-Value: 5e-42
Query Start/End: Original strand, 27 - 151
Target Start/End: Original strand, 19471608 - 19471734
Alignment:
Q  27 acccatttggg-ttggtctagtggttgacttgggatcttggagtttgttcctccagaggtctcaggtttgattccctct-gtgccaatttcggtgggcta 124  Q
    ||||||||||| |||| |||||||||| ||||||||||||||||||| ||||||||||||||||||||||||||||||| |||||||||| |||| ||||    
T  19471608 acccatttggggttggcctagtggttggcttgggatcttggagtttgctcctccagaggtctcaggtttgattccctctggtgccaattttggtgagcta 19471707  T
Q  125 agtccatacagatcttgctctggcttt 151  Q
    |||||||||||| ||||||||||||||    
T  19471708 agtccatacagagcttgctctggcttt 19471734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 87; E-Value: 5e-42
Query Start/End: Original strand, 27 - 151
Target Start/End: Original strand, 19542532 - 19542658
Alignment:
Q  27 acccatttggg-ttggtctagtggttgacttgggatcttggagtttgttcctccagaggtctcaggtttgattccctct-gtgccaatttcggtgggcta 124  Q
    ||||||||||| |||| |||||||||| ||||||||||||||||||| ||||||||||||||||||||||||||||||| |||||||||| |||| ||||    
T  19542532 acccatttggggttggcctagtggttggcttgggatcttggagtttgctcctccagaggtctcaggtttgattccctctggtgccaattttggtgagcta 19542631  T
Q  125 agtccatacagatcttgctctggcttt 151  Q
    |||||||||||| ||||||||||||||    
T  19542632 agtccatacagagcttgctctggcttt 19542658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 87; E-Value: 5e-42
Query Start/End: Original strand, 27 - 151
Target Start/End: Complemental strand, 19590164 - 19590038
Alignment:
Q  27 acccatttggg-ttggtctagtggttgacttgggatcttggagtttgttcctccagaggtctcaggtttgattccctct-gtgccaatttcggtgggcta 124  Q
    ||||||||||| |||| |||||||||| ||||||||||||||||||| ||||||||||||||||||||||||||||||| |||||||||| |||| ||||    
T  19590164 acccatttggggttggcctagtggttggcttgggatcttggagtttgctcctccagaggtctcaggtttgattccctctggtgccaattttggtgagcta 19590065  T
Q  125 agtccatacagatcttgctctggcttt 151  Q
    |||||||||||| ||||||||||||||    
T  19590064 agtccatacagagcttgctctggcttt 19590038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 87; E-Value: 5e-42
Query Start/End: Original strand, 27 - 151
Target Start/End: Original strand, 39349255 - 39349381
Alignment:
Q  27 acccatttggg-ttggtctagtggttgacttgggatcttggagtttgttcctccagaggtctcaggtttgattccctct-gtgccaatttcggtgggcta 124  Q
    ||||||||||| |||| | |||||||| ||||||||||||||||||| |||||||||||||||||||| |||||||||| ||||||||||||||||||||    
T  39349255 acccatttggggttggcccagtggttggcttgggatcttggagtttgctcctccagaggtctcaggttcgattccctctggtgccaatttcggtgggcta 39349354  T
Q  125 agtccatacagatcttgctctggcttt 151  Q
    |||||||||||| ||||||||||||||    
T  39349355 agtccatacagagcttgctctggcttt 39349381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 86; E-Value: 2e-41
Query Start/End: Original strand, 35 - 151
Target Start/End: Complemental strand, 15259599 - 15259482
Alignment:
Q  35 gggttggtctagtggttgacttgggatcttggagtttgttcctccagaggtctcaggtttgattccctct-gtgccaatttcggtgggctaagtccatac 133  Q
    ||||||||||||||||||  ||||||||||||| |||| |||||||||||||||||||| |||||||||| |||||||||||||||||||||||||||||    
T  15259599 gggttggtctagtggttggtttgggatcttggattttgctcctccagaggtctcaggttcgattccctctggtgccaatttcggtgggctaagtccatac 15259500  T
Q  134 agatcttgctctggcttt 151  Q
    ||| ||||||||||||||    
T  15259499 agagcttgctctggcttt 15259482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 86; E-Value: 2e-41
Query Start/End: Original strand, 35 - 151
Target Start/End: Original strand, 28193482 - 28193599
Alignment:
Q  35 gggttggtctagtggttgacttgggatcttggagtttgttcctccagaggtctcaggtttgattccctct-gtgccaatttcggtgggctaagtccatac 133  Q
    ||||||| |||||||||| ||||||||||||||||||| |||||||||||||||||||| |||||||||| ||||||||||||||||| |||||||||||    
T  28193482 gggttggcctagtggttggcttgggatcttggagtttgctcctccagaggtctcaggttcgattccctctggtgccaatttcggtgggttaagtccatac 28193581  T
Q  134 agatcttgctctggcttt 151  Q
    ||| ||||||||||||||    
T  28193582 agagcttgctctggcttt 28193599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 86; E-Value: 2e-41
Query Start/End: Original strand, 27 - 146
Target Start/End: Original strand, 32879278 - 32879399
Alignment:
Q  27 acccatttggg-ttggtctagtggttgacttgggatcttggagtttgttcctccagaggtctcaggtttgattccctct-gtgccaatttcggtgggcta 124  Q
    ||||||||||| ||||||||||||||||||||||||||| ||||||| |||||||||||||||||||| |||||||||| ||||||||||||||||||||    
T  32879278 acccatttggggttggtctagtggttgacttgggatcttcgagtttggtcctccagaggtctcaggttcgattccctctggtgccaatttcggtgggcta 32879377  T
Q  125 agtccatacagatcttgctctg 146  Q
    ||| |||||||| |||||||||    
T  32879378 agttcatacagagcttgctctg 32879399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 86; E-Value: 2e-41
Query Start/End: Original strand, 27 - 146
Target Start/End: Complemental strand, 42643320 - 42643199
Alignment:
Q  27 acccatttggg-ttggtctagtggttgacttgggatcttggagtttgttcctccagaggtctcaggtttgattccctct-gtgccaatttcggtgggcta 124  Q
    ||||||||||| |||| |||||||||||||||||||||||||||||| ||||||||||||||||| || |||||||||| ||||||||||||||||||||    
T  42643320 acccatttggggttggcctagtggttgacttgggatcttggagtttgctcctccagaggtctcagattcgattccctctagtgccaatttcggtgggcta 42643221  T
Q  125 agtccatacagatcttgctctg 146  Q
    |||||||||||| |||||||||    
T  42643220 agtccatacagagcttgctctg 42643199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 84; E-Value: 3e-40
Query Start/End: Original strand, 26 - 151
Target Start/End: Original strand, 42328003 - 42328129
Alignment:
Q  26 tacccatttggg-ttggtctagtggttgacttgggatcttggagtttgttcctccagaggtctcaggtttgattccctctgt-gccaatttcggtgggct 123  Q
    |||||||||||| |||| |||||||||| |||||||||||||||||| | ||||||||||| |||||||||||||||||||| |||||||||||||||||    
T  42328003 tacccatttggggttggcctagtggttggcttgggatcttggagtttct-cctccagaggtgtcaggtttgattccctctgttgccaatttcggtgggct 42328101  T
Q  124 aagtccatacagatcttgctctggcttt 151  Q
    ||||||||||||| ||||||||||||||    
T  42328102 aagtccatacagagcttgctctggcttt 42328129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 79; E-Value: 3e-37
Query Start/End: Original strand, 27 - 151
Target Start/End: Original strand, 2618185 - 2618311
Alignment:
Q  27 acccatttggg-ttggtctagtggttgacttgggatcttggagtttgttcctccagaggtctcaggtttgattccctct-gtgccaatttcggtgggcta 124  Q
    ||||||||||| |||| |||||||||| ||||||||||||||||||| ||||||||||||||  |||| |||||||||| ||||||||||| ||||||||    
T  2618185 acccatttggggttggcctagtggttggcttgggatcttggagtttgctcctccagaggtcttgggttcgattccctctggtgccaatttcagtgggcta 2618284  T
Q  125 agtccatacagatcttgctctggcttt 151  Q
    |||||||||||| ||||||||||||||    
T  2618285 agtccatacagagcttgctctggcttt 2618311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 79; E-Value: 3e-37
Query Start/End: Original strand, 27 - 147
Target Start/End: Original strand, 18532106 - 18532228
Alignment:
Q  27 acccatttggg-ttggtctagtggttgacttgggatcttggagtttgttcctccagaggtctcaggtttgattccctctg-tgccaatttcggtgggcta 124  Q
    ||||||||||| |||| |||||||||| ||||||||||||||||||| |||||||||||||||||||| ||||||||| | || ||||||||||||||||    
T  18532106 acccatttggggttggcctagtggttggcttgggatcttggagtttgctcctccagaggtctcaggttcgattccctcagatgtcaatttcggtgggcta 18532205  T
Q  125 agtccatacagatcttgctctgg 147  Q
    |||||||||||| ||||||||||    
T  18532206 agtccatacagaacttgctctgg 18532228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 78; E-Value: 1e-36
Query Start/End: Original strand, 35 - 151
Target Start/End: Complemental strand, 27746528 - 27746411
Alignment:
Q  35 gggttggtctagtggttgacttgggatcttggagtttgttcctccagaggtctcaggtttgattccctct-gtgccaatttcggtgggctaagtccatac 133  Q
    ||||||| ||||||||||  |||||||||||||||||| ||||||| |||||||||||| |||||||| | |||||||||||||||||||||||||||||    
T  27746528 gggttggcctagtggttggtttgggatcttggagtttgctcctccaaaggtctcaggttcgattccctttggtgccaatttcggtgggctaagtccatac 27746429  T
Q  134 agatcttgctctggcttt 151  Q
    ||| ||||||||||||||    
T  27746428 agagcttgctctggcttt 27746411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 77; E-Value: 4e-36
Query Start/End: Original strand, 48 - 151
Target Start/End: Original strand, 14632975 - 14633079
Alignment:
Q  48 ggttgacttgggatcttggagtttgttcctccagaggtctcaggtttgattccctct-gtgccaatttcggtgggctaagtccatacagatcttgctctg 146  Q
    ||||| ||||||||||||||||||| |||||||||||||||||||| |||||||||| |||||||||||||||||||||||| ||||||| |||||||||    
T  14632975 ggttggcttgggatcttggagtttgctcctccagaggtctcaggttcgattccctctggtgccaatttcggtgggctaagtctatacagagcttgctctg 14633074  T
Q  147 gcttt 151  Q
    |||||    
T  14633075 gcttt 14633079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 75; E-Value: 7e-35
Query Start/End: Original strand, 38 - 151
Target Start/End: Original strand, 21603241 - 21603355
Alignment:
Q  38 ttggtctagtggttgacttgggatcttggagtttgttcctccagaggtctcaggtttgattccctct-gtgccaatttcggtgggctaagtccatacaga 136  Q
    |||| |||||||||| ||||||||||| ||||||| |||||||||||||||||||| |||||||| | |||||||||||||||||||||| |||||||||    
T  21603241 ttggcctagtggttggcttgggatcttagagtttgctcctccagaggtctcaggttcgattccctatggtgccaatttcggtgggctaagcccatacaga 21603340  T
Q  137 tcttgctctggcttt 151  Q
     ||||||||||||||    
T  21603341 gcttgctctggcttt 21603355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 72; E-Value: 4e-33
Query Start/End: Original strand, 37 - 151
Target Start/End: Complemental strand, 264590 - 264475
Alignment:
Q  37 gttggtctagtggttgacttgggatcttggagtttgttcctccagaggtctcaggtttgattccctct-gtgccaatttcggtgggctaagtccatacag 135  Q
    ||||| |||||||||| ||||||||||| ||||||| |||||||||| ||||||||| |||||||||| |||||||||||||||||||||||| |||||     
T  264590 gttggcctagtggttggcttgggatcttcgagtttgctcctccagagatctcaggttcgattccctctagtgccaatttcggtgggctaagtctatacat 264491  T
Q  136 atcttgctctggcttt 151  Q
    | ||||||||||||||    
T  264490 agcttgctctggcttt 264475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 72; E-Value: 4e-33
Query Start/End: Original strand, 37 - 151
Target Start/End: Original strand, 651331 - 651446
Alignment:
Q  37 gttggtctagtggttgacttgggatcttggagtttgttcctccagaggtctcaggtttgattccctct-gtgccaatttcggtgggctaagtccatacag 135  Q
    ||||| |||||||||| ||||||||||| ||||||| |||||||||| ||||||||| |||||||||| |||||||||||||||||||||||| |||||     
T  651331 gttggcctagtggttggcttgggatcttcgagtttgctcctccagagatctcaggttcgattccctctagtgccaatttcggtgggctaagtctatacat 651430  T
Q  136 atcttgctctggcttt 151  Q
    | ||||||||||||||    
T  651431 agcttgctctggcttt 651446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 72; E-Value: 4e-33
Query Start/End: Original strand, 37 - 151
Target Start/End: Original strand, 837066 - 837181
Alignment:
Q  37 gttggtctagtggttgacttgggatcttggagtttgttcctccagaggtctcaggtttgattccctct-gtgccaatttcggtgggctaagtccatacag 135  Q
    ||||| |||||||||| ||||||||||| ||||||| |||||||||| ||||||||| |||||||||| |||||||||||||||||||||||| |||||     
T  837066 gttggcctagtggttggcttgggatcttcgagtttgctcctccagagatctcaggttcgattccctctagtgccaatttcggtgggctaagtctatacat 837165  T
Q  136 atcttgctctggcttt 151  Q
    | ||||||||||||||    
T  837166 agcttgctctggcttt 837181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 71; E-Value: 2e-32
Query Start/End: Original strand, 27 - 151
Target Start/End: Original strand, 20305907 - 20306033
Alignment:
Q  27 acccatttggg-ttggtctagtggttgacttgggatcttggagtttgttcctccagaggtctcaggtttgattccctct-gtgccaatttcggtgggcta 124  Q
    ||||||||||| |||| |||||||||| ||||||||||| ||||||| ||||||| ||||||||| || |||||| ||| |||||||||||| |||||||    
T  20305907 acccatttggggttggcctagtggttggcttgggatcttagagtttgctcctccaaaggtctcagtttcgattccttctggtgccaatttcgatgggcta 20306006  T
Q  125 agtccatacagatcttgctctggcttt 151  Q
    |||||||||||| ||||||||||||||    
T  20306007 agtccatacagagcttgctctggcttt 20306033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 71; E-Value: 2e-32
Query Start/End: Original strand, 27 - 151
Target Start/End: Original strand, 21092540 - 21092666
Alignment:
Q  27 acccatttggg-ttggtctagtggttgacttgggatcttggagtttgttcctccagaggtctcaggtttgattccctct-gtgccaatttcggtgggcta 124  Q
    ||||||||||| |||| |||||||||| ||||||||||| ||||||| ||||||| ||||||||| || |||||| ||| |||||||||||| |||||||    
T  21092540 acccatttggggttggcctagtggttggcttgggatcttagagtttgctcctccaaaggtctcagtttcgattccttctggtgccaatttcgatgggcta 21092639  T
Q  125 agtccatacagatcttgctctggcttt 151  Q
    |||||||||||| ||||||||||||||    
T  21092640 agtccatacagagcttgctctggcttt 21092666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 70; E-Value: 7e-32
Query Start/End: Original strand, 35 - 151
Target Start/End: Original strand, 24018390 - 24018507
Alignment:
Q  35 gggttggtctagtggttgacttgggatcttggagtttgttcctccagaggtctcaggtttgattccctct-gtgccaatttcggtgggctaagtccatac 133  Q
    |||||| ||||||||||||||||||||||||||||||| ||||||| |||||| ||||| |||| |||||  || ||||||| |||||||||||||||||    
T  24018390 gggttgatctagtggttgacttgggatcttggagtttgctcctccaaaggtctgaggttcgatttcctctaatgtcaatttcagtgggctaagtccatac 24018489  T
Q  134 agatcttgctctggcttt 151  Q
    ||| ||||||||||||||    
T  24018490 agagcttgctctggcttt 24018507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 70; E-Value: 7e-32
Query Start/End: Original strand, 35 - 151
Target Start/End: Original strand, 28088294 - 28088411
Alignment:
Q  35 gggttggtctagtggttgacttgggatcttggagtttgttcctccagaggtctcaggtttgattccctct-gtgccaatttcggtgggctaagtccatac 133  Q
    |||||||  |||||||||||||||||||||||||||||||| |||||||||||||| || |||||||| | ||| ||||||||||||| |||||||||||    
T  28088294 gggttggcttagtggttgacttgggatcttggagtttgttcatccagaggtctcagattcgattccctttggtgtcaatttcggtgggttaagtccatac 28088393  T
Q  134 agatcttgctctggcttt 151  Q
    ||| ||||||||| ||||    
T  28088394 agagcttgctctgacttt 28088411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 68; E-Value: 1e-30
Query Start/End: Original strand, 29 - 151
Target Start/End: Complemental strand, 4698922 - 4698799
Alignment:
Q  29 ccatttgggttggtctagtggttgacttgggatcttggagtttgttcctccagaggtctcaggtttgattccctct-gtgccaatttcggtgggctaagt 127  Q
    ||||||||||||| | || |||||  |||||||||||||||||| |||| ||||||||||||||| |||||||||| ||| |||||||||||||||||||    
T  4698922 ccatttgggttggcccagcggttggtttgggatcttggagtttgctccttcagaggtctcaggttcgattccctctggtgtcaatttcggtgggctaagt 4698823  T
Q  128 ccatacagatcttgctctggcttt 151  Q
    ||||  ||| ||||||||||||||    
T  4698822 ccatgaagaacttgctctggcttt 4698799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 67; E-Value: 4e-30
Query Start/End: Original strand, 54 - 151
Target Start/End: Original strand, 20469944 - 20470042
Alignment:
Q  54 cttgggatcttggagtttgttcctccagaggtctcaggtttgattccctct-gtgccaatttcggtgggctaagtccatacagatcttgctctggcttt 151  Q
    ||||||||||||||||||| |||||||||||||||||||| |||||||||| | |||||||| | ||||||||||||||||||| ||||||||||||||    
T  20469944 cttgggatcttggagtttgctcctccagaggtctcaggttcgattccctctagagccaatttagatgggctaagtccatacagagcttgctctggcttt 20470042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 64; E-Value: 3e-28
Query Start/End: Original strand, 33 - 151
Target Start/End: Complemental strand, 8765721 - 8765602
Alignment:
Q  33 ttgggttggtctagtggttgacttgggatcttggagtttgttcctccagaggtctcaggtttgattccctctg-tgccaatttcggtgggctaagtccat 131  Q
    ||||||||  ||| || ||| |||| |||||||||||||| ||| |||||| ||||||||| ||||||||||| ||||||||||| ||||||||||||||    
T  8765721 ttgggttgagctaatgattggcttgagatcttggagtttgctcccccagagatctcaggttcgattccctctggtgccaatttcgatgggctaagtccat 8765622  T
Q  132 acagatcttgctctggcttt 151  Q
    ||||| ||||||||||||||    
T  8765621 acagagcttgctctggcttt 8765602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 55 - 151
Target Start/End: Original strand, 2166727 - 2166822
Alignment:
Q  55 ttgggatcttggagtttgttcctccagaggtctcaggtttgattccctctgtgccaatttcggtgggctaagtccatacagatcttgctctggcttt 151  Q
    |||||||||||||||||| | ||||| |||||||||||| ||||||||| ||||||||||| || ||||||||||||||||| ||||||||||||||    
T  2166727 ttgggatcttggagtttgcttctccaaaggtctcaggttcgattccctc-gtgccaatttcagtaggctaagtccatacagagcttgctctggcttt 2166822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 59; E-Value: 2e-25
Query Start/End: Original strand, 46 - 151
Target Start/End: Complemental strand, 34610869 - 34610763
Alignment:
Q  46 gtggttgacttgggatcttggagtttgttcctccagaggtctcaggtttgattccctctg-tgccaatttcggtgggctaagtccatacagatcttgctc 144  Q
    ||||||| ||| |||| ||||||||||||| |||||| |||| ||||| ||||||||||| ||||||||||||||| ||||||| ||||||| |||||||    
T  34610869 gtggttggcttaggattttggagtttgttcatccagatgtctgaggttcgattccctctgatgccaatttcggtggtctaagtctatacagagcttgctc 34610770  T
Q  145 tggcttt 151  Q
    |||||||    
T  34610769 tggcttt 34610763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 57; E-Value: 4e-24
Query Start/End: Original strand, 36 - 151
Target Start/End: Original strand, 21667559 - 21667675
Alignment:
Q  36 ggttggtctagtggttgacttgggatcttggagtttgttcctccagaggtctcaggtttgattccctctg-tgccaatttcggtgggctaagtccataca 134  Q
    ||||||||||||||||| ||||| ||||||||| ||| ||||||| || | ||||||| |||| ||| || ||| |||||||||||||||||||||||||    
T  21667559 ggttggtctagtggttggcttggaatcttggaggttgctcctccaaagatttcaggttcgatttcctttggtgctaatttcggtgggctaagtccataca 21667658  T
Q  135 gatcttgctctggcttt 151  Q
    || ||||||||| ||||    
T  21667659 gagcttgctctgccttt 21667675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 55; E-Value: 6e-23
Query Start/End: Original strand, 82 - 151
Target Start/End: Complemental strand, 6953153 - 6953083
Alignment:
Q  82 aggtctcaggtttgattccctctg-tgccaatttcggtgggctaagtccatacagatcttgctctggcttt 151  Q
    |||||||||||| ||||||||||| ||||||||||||||||||||||||||||||| ||||||||||||||    
T  6953153 aggtctcaggttcgattccctctggtgccaatttcggtgggctaagtccatacagagcttgctctggcttt 6953083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 55; E-Value: 6e-23
Query Start/End: Original strand, 27 - 151
Target Start/End: Complemental strand, 26169050 - 26168925
Alignment:
Q  27 acccattt-gggttggtctagtggttgacttgggatcttggagtttgttcctccagaggtctcaggtttgattccctctg-tgccaatttcggtgggcta 124  Q
    |||||||| ||||||| |||||||||  ||||||||||||||||||| |||||   |||||||||||||||||||  ||| ||||||||||||||||| |    
T  26169050 acccatttagggttggcctagtggtttgcttgggatcttggagtttgctcctctcaaggtctcaggtttgattcctcctgatgccaatttcggtgggc-a 26168952  T
Q  125 agtccatacagatcttgctctggcttt 151  Q
    ||| |||||||| |||| |||||||||    
T  26168951 agttcatacagagcttgttctggcttt 26168925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 49; E-Value: 2e-19
Query Start/End: Original strand, 27 - 129
Target Start/End: Complemental strand, 7558145 - 7558041
Alignment:
Q  27 acccatttggg-ttggtctagtggttgacttgggatcttggagtttgttcctccagaggtctcaggtttgattccctct-gtgccaatttcggtgggcta 124  Q
    ||||||||||| |||| ||||| |||  ||||||||||||||||||| ||||||||| ||||||| || |||| ||||| |||||||||| |||||||||    
T  7558145 acccatttggggttggcctagtagttagcttgggatcttggagtttgctcctccagaagtctcagattcgatttcctctggtgccaattttggtgggcta 7558046  T
Q  125 agtcc 129  Q
    |||||    
T  7558045 agtcc 7558041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 49; E-Value: 2e-19
Query Start/End: Original strand, 35 - 122
Target Start/End: Complemental strand, 34694769 - 34694681
Alignment:
Q  35 gggttggtctagtggttgacttgggatcttggagtttgttcctccagaggtctcaggtttgattccctct-gtgccaatttcggtgggc 122  Q
    ||||||||||||||||||||||| |||||||||||||| |||||   |||||| ||||| |||||| ||| ||||||||||||||||||    
T  34694769 gggttggtctagtggttgacttgtgatcttggagtttgctcctctcaaggtcttaggttcgattccatctggtgccaatttcggtgggc 34694681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 46; E-Value: 1e-17
Query Start/End: Original strand, 35 - 150
Target Start/End: Complemental strand, 34639399 - 34639284
Alignment:
Q  35 gggttggtctagtggttgacttgggatcttggagtttgttcctccagaggtctcaggtttgattccctct-gtgccaatttcggtgggctaagtccatac 133  Q
    ||||| |||||||||||| |||||||||||||||| || |||||   |||||||||| | || ||||||| ||||||||||||||||| |||||||||||    
T  34639399 gggttagtctagtggttggcttgggatcttggagtgtgctcctctcaaggtctcaggctcga-tccctctggtgccaatttcggtggg-taagtccatac 34639302  T
Q  134 agatc-ttgctctggctt 150  Q
    ||| | ||||||||||||    
T  34639301 agagctttgctctggctt 34639284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 44; E-Value: 2e-16
Query Start/End: Original strand, 35 - 133
Target Start/End: Original strand, 28964041 - 28964140
Alignment:
Q  35 gggttggtctagtggttgacttgggatcttggagtttgttcctccagaggtctcaggtttgattccctctg-tgccaatttcggtgggctaagtccatac 133  Q
    ||||||||||||||||||  ||| |||||| ||||||| |||||   |||| ||| ||| |||||| |||| ||||||||||||||||||||||||||||    
T  28964041 gggttggtctagtggttggtttgagatcttagagtttgctcctcttaaggtttcatgttcgattccatctggtgccaatttcggtgggctaagtccatac 28964140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 43; E-Value: 9e-16
Query Start/End: Original strand, 27 - 151
Target Start/End: Original strand, 24999241 - 24999359
Alignment:
Q  27 acccatttgggttggtctagtggttgacttgggatcttggagtttgttcctccagaggtctcaggtttgattccctctg-tgccaatttcggtgggctaa 125  Q
    |||||||||||  ||||||||||||||||||||||| ||||||||| |       |||||| ||||| ||||||||||| ||||||||| | ||||||||    
T  24999241 acccatttgggg-ggtctagtggttgacttgggatcatggagtttgcta------aggtcttaggttcgattccctctgatgccaattttgatgggctaa 24999333  T
Q  126 gtccatacagatcttgctctggcttt 151  Q
    || |||| ||| ||||||||||||||    
T  24999334 gttcatatagagcttgctctggcttt 24999359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 41; E-Value: 0.00000000000001
Query Start/End: Original strand, 44 - 151
Target Start/End: Complemental strand, 9047462 - 9047354
Alignment:
Q  44 tagtggttgacttgggatcttggagtttgttcctccagaggtctcaggtttgattccctct-gtgccaatttcggtgggctaagtccatacagatcttgc 142  Q
    |||||||||  ||| |||||||||||||| ||||||| |||| | | ||||||||||||||  ||||||||| ||||| ||||||||||||| | ||| |    
T  9047462 tagtggttggtttgagatcttggagtttgctcctccaaaggttttaagtttgattccctctaatgccaattttggtggactaagtccatacaaagcttac 9047363  T
Q  143 tctggcttt 151  Q
    |||| ||||    
T  9047362 tctgacttt 9047354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 38; E-Value: 0.0000000000008
Query Start/End: Original strand, 35 - 151
Target Start/End: Complemental strand, 36848942 - 36848825
Alignment:
Q  35 gggttggtctagtggttgacttgggatcttggagtttgttcctccagaggtctcaggtttgattccctctg-tgccaatttcggtgggctaagtccatac 133  Q
    |||||||  |||||||||||||||| | |||||||||| |||||   |||| | || ||  ||| |||||| ||||||||||||||||||||||||||||    
T  36848942 gggttggcatagtggttgacttgggtttttggagtttgctcctctcaaggttttagattccatttcctctggtgccaatttcggtgggctaagtccatac 36848843  T
Q  134 agatcttgctctggcttt 151  Q
     ||  |||||| ||||||    
T  36848842 ggagtttgctcgggcttt 36848825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 37; E-Value: 0.000000000003
Query Start/End: Original strand, 80 - 151
Target Start/End: Original strand, 10292108 - 10292179
Alignment:
Q  80 agaggtctcaggtttgattccctctg-tgccaatttcggtgggctaagtccatacagatcttgctctggcttt 151  Q
    |||||||||||||| ||||||||||| |||||||||| ||||||| ||||||| ||||  |||||||||||||    
T  10292108 agaggtctcaggttcgattccctctgatgccaatttcagtgggctgagtccat-cagagattgctctggcttt 10292179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 37; E-Value: 0.000000000003
Query Start/End: Original strand, 35 - 122
Target Start/End: Original strand, 41070769 - 41070857
Alignment:
Q  35 gggttggtctagtggttgacttgggatcttggagtttgttcctccagaggtctcaggtttgattccctct-gtgccaatttcggtgggc 122  Q
    ||||||| ||||||||||||||||||||||||||| || | |||   |||||||| ||| |||||||| | ||| ||||||||||||||    
T  41070769 gggttggcctagtggttgacttgggatcttggagtgtgctactctcaaggtctcaagttcgattccctttggtgtcaatttcggtgggc 41070857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 36; E-Value: 0.00000000001
Query Start/End: Original strand, 49 - 124
Target Start/End: Complemental strand, 40137013 - 40136938
Alignment:
Q  49 gttgacttgggatcttggagtttgttcctccagaggtctcaggtttgattccctctgtgccaatttcggtgggcta 124  Q
    |||| ||||||| |||||||| || |||||   |||||||||||||||||| | | ||||||||||||||||||||    
T  40137013 gttggcttgggaccttggagtgtgctcctctcaaggtctcaggtttgattctcccggtgccaatttcggtgggcta 40136938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 35; E-Value: 0.00000000005
Query Start/End: Original strand, 43 - 136
Target Start/End: Original strand, 8042670 - 8042757
Alignment:
Q  43 ctagtggttgacttgggatcttggagtttgttcctccagaggtctcaggtttgattccctctgtgccaatttcggtgggctaagtccatacaga 136  Q
    |||||| ||| ||||||||||||||||||| ||||||| | |||||||||| |||       |||||||||| ||||||||| |||||||||||    
T  8042670 ctagtgcttggcttgggatcttggagtttgctcctccaaaagtctcaggttcgat------ggtgccaattttggtgggctatgtccatacaga 8042757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 32; E-Value: 0.000000003
Query Start/End: Original strand, 85 - 151
Target Start/End: Original strand, 25248407 - 25248473
Alignment:
Q  85 tctcaggtttgattccctct-gtgccaatttcggtgggctaagtccatacagatcttgctctggcttt 151  Q
    ||||||||| |||||||||| ||| |||||||||| |||||||| ||||||||  |||||||||||||    
T  25248407 tctcaggttcgattccctctggtgtcaatttcggtaggctaagt-catacagagtttgctctggcttt 25248473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 31; E-Value: 0.00000001
Query Start/End: Original strand, 74 - 151
Target Start/End: Original strand, 1219396 - 1219474
Alignment:
Q  74 tcctccagaggtctcaggtttgattccctctg-tgccaatttcggtgggctaagtccatacagatcttgctctggcttt 151  Q
    ||||||| || | ||||||| ||||||||||| |  ||||||| ||||||||||||||||||||  ||| |||||||||    
T  1219396 tcctccaaagatttcaggttcgattccctctgatatcaatttcagtgggctaagtccatacagaatttgttctggcttt 1219474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 31; E-Value: 0.00000001
Query Start/End: Original strand, 36 - 122
Target Start/End: Original strand, 15974915 - 15975000
Alignment:
Q  36 ggttggtctagtggttgacttgggatcttggagtttgttcctccagaggtctcaggtttgattccctctgtgccaatttcggtgggc 122  Q
    |||||| ||||||||| ||||||||||||||||| || |||||   |||||||| ||| |||||||   |||| |||||||||||||    
T  15974915 ggttggcctagtggtt-acttgggatcttggagtatgctcctctcaaggtctcaagttcgattcccctagtgcaaatttcggtgggc 15975000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 29; E-Value: 0.0000002
Query Start/End: Original strand, 82 - 125
Target Start/End: Complemental strand, 44780131 - 44780087
Alignment:
Q  82 aggtctcaggtttgattccctct-gtgccaatttcggtgggctaa 125  Q
    ||||||||||||||||||||||| ||| |||||| ||||||||||    
T  44780131 aggtctcaggtttgattccctctagtgtcaatttgggtgggctaa 44780087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 91; Significance: 2e-44; HSPs: 63)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 91; E-Value: 2e-44
Query Start/End: Original strand, 27 - 151
Target Start/End: Complemental strand, 7176064 - 7175938
Alignment:
Q  27 acccatttggg-ttggtctagtggttgacttgggatcttggagtttgttcctccagaggtctcaggtttgattccctct-gtgccaatttcggtgggcta 124  Q
    ||||||||||| |||| |||||||||| ||||||||||||||||||| |||||||||||||||||||| |||||||||| ||||||||||||||||||||    
T  7176064 acccatttggggttggcctagtggttggcttgggatcttggagtttgctcctccagaggtctcaggttcgattccctctggtgccaatttcggtgggcta 7175965  T
Q  125 agtccatacagatcttgctctggcttt 151  Q
    |||||||||||| ||||||||||||||    
T  7175964 agtccatacagagcttgctctggcttt 7175938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 91; E-Value: 2e-44
Query Start/End: Original strand, 27 - 151
Target Start/End: Original strand, 7275276 - 7275402
Alignment:
Q  27 acccatttggg-ttggtctagtggttgacttgggatcttggagtttgttcctccagaggtctcaggtttgattccctct-gtgccaatttcggtgggcta 124  Q
    ||||||||||| |||| |||||||||| ||||||||||||||||||| |||||||||||||||||||| |||||||||| ||||||||||||||||||||    
T  7275276 acccatttggggttggcctagtggttggcttgggatcttggagtttgctcctccagaggtctcaggttcgattccctctggtgccaatttcggtgggcta 7275375  T
Q  125 agtccatacagatcttgctctggcttt 151  Q
    |||||||||||| ||||||||||||||    
T  7275376 agtccatacagagcttgctctggcttt 7275402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 91; E-Value: 2e-44
Query Start/End: Original strand, 27 - 151
Target Start/End: Original strand, 10091187 - 10091313
Alignment:
Q  27 acccatttggg-ttggtctagtggttgacttgggatcttggagtttgttcctccagaggtctcaggtttgattccctct-gtgccaatttcggtgggcta 124  Q
    ||||||||||| ||||||||||||||| ||||||||||||||||||| |||||||||||||||||||| |||||||||| | ||||||||||||||||||    
T  10091187 acccatttggggttggtctagtggttggcttgggatcttggagtttgctcctccagaggtctcaggttcgattccctctggagccaatttcggtgggcta 10091286  T
Q  125 agtccatacagatcttgctctggcttt 151  Q
    |||||||||||| ||||||||||||||    
T  10091287 agtccatacagagcttgctctggcttt 10091313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 91; E-Value: 2e-44
Query Start/End: Original strand, 27 - 151
Target Start/End: Complemental strand, 40543112 - 40542986
Alignment:
Q  27 acccatttggg-ttggtctagtggttgacttgggatcttggagtttgttcctccagaggtctcaggtttgattccctct-gtgccaatttcggtgggcta 124  Q
    ||||||||||| |||| |||||||||| ||||||||||||||||||| |||||||||||||||||||| |||||||||| ||||||||||||||||||||    
T  40543112 acccatttggggttggcctagtggttggcttgggatcttggagtttgctcctccagaggtctcaggttcgattccctctggtgccaatttcggtgggcta 40543013  T
Q  125 agtccatacagatcttgctctggcttt 151  Q
    |||||||||||| ||||||||||||||    
T  40543012 agtccatacagagcttgctctggcttt 40542986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 90; E-Value: 8e-44
Query Start/End: Original strand, 35 - 151
Target Start/End: Original strand, 22119896 - 22120013
Alignment:
Q  35 gggttggtctagtggttgacttgggatcttggagtttgttcctccagaggtctcaggtttgattccctct-gtgccaatttcggtgggctaagtccatac 133  Q
    ||||||| |||||||||| ||||||||||||||||||| |||||||||||||||||||| |||||||||| |||||||||||||||||||||||||||||    
T  22119896 gggttggcctagtggttggcttgggatcttggagtttgctcctccagaggtctcaggttcgattccctctggtgccaatttcggtgggctaagtccatac 22119995  T
Q  134 agatcttgctctggcttt 151  Q
    ||| ||||||||||||||    
T  22119996 agagcttgctctggcttt 22120013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 88; E-Value: 1e-42
Query Start/End: Original strand, 5 - 151
Target Start/End: Original strand, 31197568 - 31197715
Alignment:
Q  5 acattaacattatccaaatcctacccatttggg-ttggtctagtggttgacttgggatcttggagtttgttcctccagaggtctcaggtttgattccctc 103  Q
    |||||||||| |||||||||| ||||||||||| ||||||||||||||| ||||||||||||||||||| || |||||| ||||||||||||||||  |     
T  31197568 acattaacatcatccaaatccaacccatttggggttggtctagtggttggcttgggatcttggagtttgctcatccagatgtctcaggtttgattcatta 31197667  T
Q  104 tgtgccaatttcggtgggctaagtccatacagatcttgctctggcttt 151  Q
    |||| ||||||||||||  ||||||||||||||||||||||| |||||    
T  31197668 tgtgtcaatttcggtggattaagtccatacagatcttgctcttgcttt 31197715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 87; E-Value: 5e-42
Query Start/End: Original strand, 27 - 151
Target Start/End: Original strand, 2103054 - 2103180
Alignment:
Q  27 acccatttggg-ttggtctagtggttgacttgggatcttggagtttgttcctccagaggtctcaggtttgattccctct-gtgccaatttcggtgggcta 124  Q
    ||||||||||| |||| |||||||||| ||||||||||||||||||| |||||||||||||||||||| |||||||||| | ||||||||||||||||||    
T  2103054 acccatttggggttggcctagtggttggcttgggatcttggagtttgctcctccagaggtctcaggttcgattccctctggagccaatttcggtgggcta 2103153  T
Q  125 agtccatacagatcttgctctggcttt 151  Q
    |||||||||||| ||||||||||||||    
T  2103154 agtccatacagagcttgctctggcttt 2103180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 87; E-Value: 5e-42
Query Start/End: Original strand, 27 - 151
Target Start/End: Original strand, 2751270 - 2751396
Alignment:
Q  27 acccatttggg-ttggtctagtggttgacttgggatcttggagtttgttcctccagaggtctcaggtttgattccctct-gtgccaatttcggtgggcta 124  Q
    ||||||||||| |||| |||||||||| ||||||||||||||||||| ||||||| |||||||||||| |||||||||| ||||||||||||||||||||    
T  2751270 acccatttggggttggcctagtggttggcttgggatcttggagtttgctcctccaaaggtctcaggttcgattccctctggtgccaatttcggtgggcta 2751369  T
Q  125 agtccatacagatcttgctctggcttt 151  Q
    |||||||||||| ||||||||||||||    
T  2751370 agtccatacagagcttgctctggcttt 2751396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 87; E-Value: 5e-42
Query Start/End: Original strand, 27 - 151
Target Start/End: Original strand, 18044106 - 18044232
Alignment:
Q  27 acccatttggg-ttggtctagtggttgacttgggatcttggagtttgttcctccagaggtctcaggtttgattccctc-tgtgccaatttcggtgggcta 124  Q
    ||||||||||| |||| |||||||||| ||||||||||||||||||| ||||||||||||| |||||| ||||||||| |||||||||||||||||||||    
T  18044106 acccatttggggttggcctagtggttggcttgggatcttggagtttgctcctccagaggtcccaggttcgattccctcttgtgccaatttcggtgggcta 18044205  T
Q  125 agtccatacagatcttgctctggcttt 151  Q
    |||||||||||| ||||||||||||||    
T  18044206 agtccatacagagcttgctctggcttt 18044232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 87; E-Value: 5e-42
Query Start/End: Original strand, 27 - 151
Target Start/End: Complemental strand, 21218035 - 21217909
Alignment:
Q  27 acccatttggg-ttggtctagtggttgacttgggatcttggagtttgttcctccagaggtctcaggtttgattccctctg-tgccaatttcggtgggcta 124  Q
    ||||||||||| |||| |||||||||| ||||||||||||||||||| |||||||||||||||||||| ||||||||||| |||||||||||||||||||    
T  21218035 acccatttggggttggcctagtggttggcttgggatcttggagtttgctcctccagaggtctcaggttcgattccctctgatgccaatttcggtgggcta 21217936  T
Q  125 agtccatacagatcttgctctggcttt 151  Q
    |||||||||||| |||||||| |||||    
T  21217935 agtccatacagagcttgctctagcttt 21217909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 82; E-Value: 5e-39
Query Start/End: Original strand, 43 - 151
Target Start/End: Original strand, 21835167 - 21835276
Alignment:
Q  43 ctagtggttgacttgggatcttggagtttgttcctccagaggtctcaggtttgattccctct-gtgccaatttcggtgggctaagtccatacagatcttg 141  Q
    |||||||||| ||||||||||||||||||| |||||||||| ||||||||| |||||||||| |||||||||||||||||||||||||||||||| ||||    
T  21835167 ctagtggttggcttgggatcttggagtttgctcctccagagatctcaggttcgattccctctggtgccaatttcggtgggctaagtccatacagagcttg 21835266  T
Q  142 ctctggcttt 151  Q
    ||||||||||    
T  21835267 ctctggcttt 21835276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 82; E-Value: 5e-39
Query Start/End: Original strand, 35 - 151
Target Start/End: Complemental strand, 23012701 - 23012584
Alignment:
Q  35 gggttggtctagtggttgacttgggatcttggagtttgttcctccagaggtctcaggtttgattccctct-gtgccaatttcggtgggctaagtccatac 133  Q
    ||||||| | |||||||| ||||||||||||||||||| | |||||||||||| |||||||||||||||| |||||||||||||||||||||||||||||    
T  23012701 gggttggcccagtggttggcttgggatcttggagtttgcttctccagaggtcttaggtttgattccctctagtgccaatttcggtgggctaagtccatac 23012602  T
Q  134 agatcttgctctggcttt 151  Q
    ||| ||||||||||||||    
T  23012601 agagcttgctctggcttt 23012584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 79; E-Value: 3e-37
Query Start/End: Original strand, 27 - 151
Target Start/End: Original strand, 11997848 - 11997974
Alignment:
Q  27 acccatttg-ggttggtctagtggttgacttgggatcttggagtttgttcctccagaggtctcaggtttgattccctct-gtgccaatttcggtgggcta 124  Q
    ||||||||| |||||| |||||||||| ||||||||||||||||||| ||||| |||||||||||||| |||||||||| |||||||||||||| |||||    
T  11997848 acccatttgtggttgggctagtggttggcttgggatcttggagtttgctcctctagaggtctcaggttcgattccctctggtgccaatttcggttggcta 11997947  T
Q  125 agtccatacagatcttgctctggcttt 151  Q
    |||||||||| | ||||||||||||||    
T  11997948 agtccatacatagcttgctctggcttt 11997974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 77; E-Value: 4e-36
Query Start/End: Original strand, 44 - 151
Target Start/End: Original strand, 22703503 - 22703611
Alignment:
Q  44 tagtggttgacttgggatcttggagtttgttcctccagaggtctcaggtttgattccctct-gtgccaatttcggtgggctaagtccatacagatcttgc 142  Q
    ||||||||| ||||||||||||||||||| |||||||||||||||||||| |||||||||| ||| |||||||||||||||||||||||||| | |||||    
T  22703503 tagtggttggcttgggatcttggagtttgctcctccagaggtctcaggttcgattccctctggtgtcaatttcggtgggctaagtccatacaaagcttgc 22703602  T
Q  143 tctggcttt 151  Q
    |||||||||    
T  22703603 tctggcttt 22703611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 75; E-Value: 7e-35
Query Start/End: Original strand, 27 - 151
Target Start/End: Original strand, 27009358 - 27009484
Alignment:
Q  27 acccatttggg-ttggtctagtggttgacttgggatcttggagtttgttcctccagaggtctcaggtttgattccctct-gtgccaatttcggtgggcta 124  Q
    ||||||||||| |||| |||||||||| ||| ||||||||||||||| || ||||||||||||||||| ||| |||||| ||||||||||||||||||||    
T  27009358 acccatttggggttggcctagtggttggcttcggatcttggagtttgctcatccagaggtctcaggttcgatcccctctggtgccaatttcggtgggcta 27009457  T
Q  125 agtccatacagatcttgctctggcttt 151  Q
    |||||||||||| ||||||||| ||||    
T  27009458 agtccatacagagcttgctctgacttt 27009484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 74; E-Value: 3e-34
Query Start/End: Original strand, 35 - 151
Target Start/End: Complemental strand, 13332616 - 13332499
Alignment:
Q  35 gggttggtctagtggttgacttgggatcttggagtttgttcctccagaggtctcaggtttgattccctct-gtgccaatttcggtgggctaagtccatac 133  Q
    ||||||| |||||||||| ||||||||||||||||||| |||||| ||||||||||||  |||||||||| | |||||||||||||||||||||||||||    
T  13332616 gggttggcctagtggttggcttgggatcttggagtttgctcctcctgaggtctcaggtacgattccctctggagccaatttcggtgggctaagtccatac 13332517  T
Q  134 agatcttgctctggcttt 151  Q
    ||| ||| ||||||||||    
T  13332516 agagcttactctggcttt 13332499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 74; E-Value: 3e-34
Query Start/End: Original strand, 27 - 150
Target Start/End: Original strand, 17212052 - 17212177
Alignment:
Q  27 acccatttggg-ttggtctagtggttgacttgggatcttggagtttgttcctccagaggtctcaggtttgattccctct-gtgccaatttcggtgggcta 124  Q
    ||||||||||| ||||  ||||||||| ||||||||||||||||||| ||||||||||||||||||||  |||| |||| ||||||||||||||||||||    
T  17212052 acccatttggggttggcttagtggttggcttgggatcttggagtttgctcctccagaggtctcaggttcaattctctctggtgccaatttcggtgggcta 17212151  T
Q  125 agtccatacagatcttgctctggctt 150  Q
    ||||||||||||  ||||||||||||    
T  17212152 agtccatacagagattgctctggctt 17212177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 71; E-Value: 2e-32
Query Start/End: Original strand, 27 - 151
Target Start/End: Complemental strand, 7800034 - 7799908
Alignment:
Q  27 acccatttggg-ttggtctagtggttgacttgggatcttggagtttgttcctccagaggtctcaggtttgattccctct-gtgccaatttcggtgggcta 124  Q
    ||||||||||| |||  |||||||||| ||||||||||||||||||| |||||||||||||||||||| |||||||||| ||||||||||| ||||| ||    
T  7800034 acccatttggggttgacctagtggttggcttgggatcttggagtttgctcctccagaggtctcaggttcgattccctctggtgccaatttcagtgggtta 7799935  T
Q  125 agtccatacagatcttgctctggcttt 151  Q
    |||||||| ||| |||||| |||||||    
T  7799934 agtccatagagagcttgctatggcttt 7799908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 71; E-Value: 2e-32
Query Start/End: Original strand, 27 - 151
Target Start/End: Original strand, 32849590 - 32849716
Alignment:
Q  27 acccatttggg-ttggtctagtggttgacttgggatcttggagtttgttcctccagaggtctcaggtttgattccctct-gtgccaatttcggtgggcta 124  Q
    ||||||||||| || | |||||||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||| ||  |||||| |||||||||    
T  32849590 acccatttggggttagcctagtggttgacttgggatcttggagtttgctcctccagaggtctcgggtttgattccctctagtctcaattttggtgggcta 32849689  T
Q  125 agtccatacagatcttgctctggcttt 151  Q
    |||||| || || ||||||||||||||    
T  32849690 agtccacactgagcttgctctggcttt 32849716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 67; E-Value: 4e-30
Query Start/End: Original strand, 27 - 151
Target Start/End: Complemental strand, 17197152 - 17197026
Alignment:
Q  27 acccatttgggtt-ggtctagtggttgacttgggatcttggagtttgttcctccagaggtctcaggtttgattccctctg-tgccaatttcggtgggcta 124  Q
    ||||||||||| | || ||||||||||  ||| |||||||||||||| ||||||| |||||||| ||| ||||||||||| |||||||||||||| ||||    
T  17197152 acccatttggggtcggcctagtggttggtttgcgatcttggagtttgctcctccataggtctcaagttcgattccctctggtgccaatttcggtgagcta 17197053  T
Q  125 agtccatacagatcttgctctggcttt 151  Q
    |||||||||||| ||||||||||||||    
T  17197052 agtccatacagagcttgctctggcttt 17197026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 65; E-Value: 6e-29
Query Start/End: Original strand, 36 - 151
Target Start/End: Original strand, 9683835 - 9683951
Alignment:
Q  36 ggttggtctagtggttgacttgggatcttggagtttgttcctccagaggtctcaggtttgattccctct-gtgccaatttcggtgggctaagtccataca 134  Q
    |||||| ||||||||||||||| ||||| |||||||| ||||| ||||||||||||  | ||||||||| |||||||||||||||||||||||||||||     
T  9683835 ggttggcctagtggttgacttgagatctgggagtttgctcctctagaggtctcaggcctaattccctctagtgccaatttcggtgggctaagtccatacc 9683934  T
Q  135 gatcttgctctggcttt 151  Q
    || ||| ||||||||||    
T  9683935 gagcttactctggcttt 9683951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 65; E-Value: 6e-29
Query Start/End: Original strand, 59 - 151
Target Start/End: Complemental strand, 36772471 - 36772379
Alignment:
Q  59 gatcttggagtttgttcctccagaggtctcaggtttgattccctctgtgccaatttcggtgggctaagtccatacagatcttgctctggcttt 151  Q
    |||||||||||||| ||||| ||||||||||||||||||| || || |||||||||||||||||||||| |||||||| ||||||||||||||    
T  36772471 gatcttggagtttgctcctctagaggtctcaggtttgatttcccctatgccaatttcggtgggctaagttcatacagagcttgctctggcttt 36772379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 65; E-Value: 6e-29
Query Start/End: Original strand, 44 - 151
Target Start/End: Original strand, 42814881 - 42814989
Alignment:
Q  44 tagtggttgacttgggatcttggagtttgttcctccagaggtctcaggtttgattccctct-gtgccaatttcggtgggctaagtccatacagatcttgc 142  Q
    ||||||||||||||||||||||||||||| |||||  || |||||||||| |||||||||| ||| |||||||||||||||||||||||||| | |||||    
T  42814881 tagtggttgacttgggatcttggagtttgctcctcttgaagtctcaggttcgattccctctggtgtcaatttcggtgggctaagtccatacaaagcttgc 42814980  T
Q  143 tctggcttt 151  Q
    |||| ||||    
T  42814981 tctgacttt 42814989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 64; E-Value: 3e-28
Query Start/End: Original strand, 49 - 151
Target Start/End: Original strand, 31273936 - 31274039
Alignment:
Q  49 gttgacttgggatcttggagtttgttcctccagaggtctcaggtttgattccctct-gtgccaatttcggtgggctaagtccatacagatcttgctctgg 147  Q
    |||||||||||||||||||||||| |||||||||| ||||| ||| |||||||||| | || |||||||| |||||||||||||||||| ||||||||||    
T  31273936 gttgacttgggatcttggagtttgctcctccagagctctcaagttcgattccctctggagctaatttcggcgggctaagtccatacagagcttgctctgg 31274035  T
Q  148 cttt 151  Q
    ||||    
T  31274036 cttt 31274039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 64; E-Value: 3e-28
Query Start/End: Original strand, 27 - 151
Target Start/End: Complemental strand, 39145854 - 39145727
Alignment:
Q  27 acccatttg-ggttggtctagtggttgacttgggatcttggagtttgttcctccagaggtctcaggtttgattccctct-gtgccaatttcggtgggcta 124  Q
    ||||||||| |||||  |||||||||||||||||||||||||||||| ||||||||| ||||  |||| |||||||| | ||||||||||||||||||||    
T  39145854 acccatttgaggttgacctagtggttgacttgggatcttggagtttgctcctccagatgtcttcggttcgattccctgtggtgccaatttcggtgggcta 39145755  T
Q  125 agtccat-acagatcttgctctggcttt 151  Q
    |||| || ||||| ||||||||||||||    
T  39145754 agtcaataacagagcttgctctggcttt 39145727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 63; E-Value: 1e-27
Query Start/End: Original strand, 27 - 151
Target Start/End: Original strand, 28950868 - 28950996
Alignment:
Q  27 acccatttgggttggtctagtggttgacttgggatcttggagt---ttgttcctccagaggtctcaggtttgattccctctg-tgccaatttcggtgggc 122  Q
    |||||||| |||||| |||||||||| |||||| |||||||||   ||| |||| ||||||||||||||| || |||||||| |||||||||||||||||    
T  28950868 acccatttaggttggcctagtggttggcttggggtcttggagtagtttgctccttcagaggtctcaggttcgactccctctggtgccaatttcggtgggc 28950967  T
Q  123 taagtccatacagatcttgctctggcttt 151  Q
    ||||| |||| ||| ||||||||||||||    
T  28950968 taagttcatatagagcttgctctggcttt 28950996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 44 - 151
Target Start/End: Original strand, 19421248 - 19421356
Alignment:
Q  44 tagtggttgacttgggatcttggagtttgttcctccagaggtctcaggtttgattccctct-gtgccaatttcggtgggctaagtccatacagatcttgc 142  Q
    ||||||||| ||||||||||||||||||| ||||| |||||||||||||| |||| | ||| ||| |||||||| ||||||||||||||||||| |||||    
T  19421248 tagtggttggcttgggatcttggagtttgctcctctagaggtctcaggttcgatttcttctggtgtcaatttcgatgggctaagtccatacagagcttgc 19421347  T
Q  143 tctggcttt 151  Q
    |||| ||||    
T  19421348 tctgacttt 19421356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 35 - 134
Target Start/End: Original strand, 28089824 - 28089924
Alignment:
Q  35 gggttggtctagtggttgacttgggatcttggagtttgttcctccagaggtctcaggtttgattccctct-gtgccaatttcggtgggctaagtccatac 133  Q
    ||||||| |||||||||| |||| |||||||||||||| ||||||||| |||||||||| ||| |||||| ||| |||||||||||||||||||||||||    
T  28089824 gggttggcctagtggttggcttgagatcttggagtttgctcctccagatgtctcaggttcgataccctctggtgtcaatttcggtgggctaagtccatac 28089923  T
Q  134 a 134  Q
    |    
T  28089924 a 28089924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 36 - 151
Target Start/End: Complemental strand, 42913705 - 42913589
Alignment:
Q  36 ggttggtctagtggttgacttgggatcttggagtttgttcctccagaggtctcaggtttgattccctct-gtgccaatttcggtgggctaagtccataca 134  Q
    |||||| |||||||||| ||||||||||||||||||| ||||| |||||||||||||| |||| | | | |||||||||||| |||| |||||||||||     
T  42913705 ggttggcctagtggttggcttgggatcttggagtttgctcctctagaggtctcaggttcgatttcatatggtgccaatttcgatgggataagtccatacg 42913606  T
Q  135 gatcttgctctggcttt 151  Q
    || ||||||||||||||    
T  42913605 gaacttgctctggcttt 42913589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 60; E-Value: 6e-26
Query Start/End: Original strand, 69 - 151
Target Start/End: Complemental strand, 654863 - 654780
Alignment:
Q  69 tttgttcctccagaggtctcaggtttgattccctctg-tgccaatttcggtgggctaagtccatacagatcttgctctggcttt 151  Q
    |||| ||||||| |||||||||||| ||||||||||| ||||||||||||||||||||||||||||||| ||||||||||||||    
T  654863 tttgctcctccaaaggtctcaggttcgattccctctggtgccaatttcggtgggctaagtccatacagagcttgctctggcttt 654780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 60; E-Value: 6e-26
Query Start/End: Original strand, 27 - 136
Target Start/End: Original strand, 2344298 - 2344409
Alignment:
Q  27 acccatttggg-ttggtctagtggttgacttgggatcttggagtttgttcctccagaggtctcaggtttgattccctct-gtgccaatttcggtgggcta 124  Q
    ||||||||||| |||| |||||||||| ||||||||||||||||||| ||||||| || |||||| || |||||| ||| |||||||||| |||||||||    
T  2344298 acccatttggggttggcctagtggttggcttgggatcttggagtttgctcctccaaagctctcagattcgattccttctggtgccaattttggtgggcta 2344397  T
Q  125 agtccatacaga 136  Q
    ||||||||||||    
T  2344398 agtccatacaga 2344409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 60; E-Value: 6e-26
Query Start/End: Original strand, 37 - 151
Target Start/End: Original strand, 27704012 - 27704127
Alignment:
Q  37 gttggtctagtggttgacttgggatcttggagtttgttcctccagaggtctcaggtttgattccctctg-tgccaatttcggtgggctaagtccatacag 135  Q
    ||||||| |||||||| |||| ||||||| |||||| |||| ||||||||||||||| |||| ||| || ||||||||||||||||||||||||||| ||    
T  27704012 gttggtccagtggttggcttgagatcttgaagtttgctcctacagaggtctcaggttcgatttcctttggtgccaatttcggtgggctaagtccatagag 27704111  T
Q  136 atcttgctctggcttt 151  Q
    | |||||| |||||||    
T  27704112 agcttgctttggcttt 27704127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 59; E-Value: 2e-25
Query Start/End: Original strand, 35 - 136
Target Start/End: Original strand, 27312160 - 27312262
Alignment:
Q  35 gggttggtctagtggttgacttgggatcttggagtttgttcctccagaggtctcaggtttgattccctct-gtgccaatttcggtgggctaagtccatac 133  Q
    ||||||| |||||||||| ||||||||||||||||||| ||||| |||||| ||||||| |||||||||| |||||||||||| || || ||||||||||    
T  27312160 gggttggcctagtggttggcttgggatcttggagtttgctcctctagaggtttcaggttcgattccctctagtgccaatttcgatgtgccaagtccatac 27312259  T
Q  134 aga 136  Q
    |||    
T  27312260 aga 27312262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 43 - 123
Target Start/End: Original strand, 22299865 - 22299946
Alignment:
Q  43 ctagtggttgacttgggatcttggagtttgttcctccagaggtctcaggtttgattccctct-gtgccaatttcggtgggct 123  Q
    |||||||||| ||||||||||||||||||| |||||||||||||||| ||| |||||||||| |||||||||||||||||||    
T  22299865 ctagtggttggcttgggatcttggagtttgctcctccagaggtctcaagttcgattccctctggtgccaatttcggtgggct 22299946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 79 - 151
Target Start/End: Original strand, 29861722 - 29861795
Alignment:
Q  79 cagaggtctcaggtttgattccctctg-tgccaatttcggtgggctaagtccatacagatcttgctctggcttt 151  Q
    ||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||| ||||||||||||||    
T  29861722 cagaggtctcaggttcgattccctctggtgccaatttcggtgggctaagtccatacagaacttgctctggcttt 29861795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 55; E-Value: 6e-23
Query Start/End: Original strand, 46 - 151
Target Start/End: Complemental strand, 14199848 - 14199742
Alignment:
Q  46 gtggttgacttgggatcttggagtttgttcctccagaggtctcaggtttgattccctct-gtgccaatttcggtgggctaagtccatacagatcttgctc 144  Q
    |||||||| |||| ||||||||||||  |||||||||||||||||||| ||||||||||  ||||||||| ||||||||||||| ||| ||| |||||||    
T  14199848 gtggttgatttggaatcttggagtttcctcctccagaggtctcaggttcgattccctctaatgccaattttggtgggctaagtctatatagagcttgctc 14199749  T
Q  145 tggcttt 151  Q
    || ||||    
T  14199748 tgccttt 14199742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 53; E-Value: 9e-22
Query Start/End: Original strand, 36 - 151
Target Start/End: Complemental strand, 9718179 - 9718063
Alignment:
Q  36 ggttggtctagtggttgacttgggatcttggagtttgttcctccagaggtctcaggtttgattccctctg-tgccaatttcggtgggctaagtccataca 134  Q
    |||||| |||||||||| | || ||| |||||||||| ||||||| | |||||| ||| ||||||||||| || |||||||| ||||||||||||||| |    
T  9718179 ggttggcctagtggttggcctgagatattggagtttgctcctccaaaagtctcaagttcgattccctctggtgtcaatttcgatgggctaagtccataga 9718080  T
Q  135 gatcttgctctggcttt 151  Q
    || ||||||||||||||    
T  9718079 gagcttgctctggcttt 9718063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 52; E-Value: 4e-21
Query Start/End: Original strand, 35 - 121
Target Start/End: Original strand, 22696328 - 22696415
Alignment:
Q  35 gggttggtctagtggttgacttgggatcttggagtttgttcctccagaggtctcaggtttgattccctct-gtgccaatttcggtggg 121  Q
    ||||||| ||||||||||| ||||||||||||||| || |||||   ||||||||||||||||||||||| |||||||||||||||||    
T  22696328 gggttggcctagtggttgatttgggatcttggagtgtgctcctctcaaggtctcaggtttgattccctctggtgccaatttcggtggg 22696415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 51; E-Value: 1e-20
Query Start/End: Original strand, 27 - 127
Target Start/End: Original strand, 22638291 - 22638393
Alignment:
Q  27 acccatttggg-ttggtctagtggttgacttgggatcttggagtttgttcctccagaggtctcaggtttgattccctct-gtgccaatttcggtgggcta 124  Q
    ||||||||||| |||||||||||||||||||| |||||| ||||||| || | || |||||||||||| |||||||||| |||| |||||||||||| ||    
T  22638291 acccatttggggttggtctagtggttgacttgagatcttagagtttgctctttcaaaggtctcaggttcgattccctctggtgctaatttcggtgggtta 22638390  T
Q  125 agt 127  Q
    |||    
T  22638391 agt 22638393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 50; E-Value: 6e-20
Query Start/End: Original strand, 67 - 151
Target Start/End: Original strand, 16374034 - 16374119
Alignment:
Q  67 agtttgttcctccagaggtctcaggtttgattccctctg-tgccaatttcggtgggctaagtccatacagatcttgctctggcttt 151  Q
    |||||| ||||||||||||||||| || ||||||||||| |||||||||||||||| ||||||||||||||  ||||| |||||||    
T  16374034 agtttgctcctccagaggtctcagattcgattccctctggtgccaatttcggtgggttaagtccatacagaatttgctatggcttt 16374119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 50; E-Value: 6e-20
Query Start/End: Original strand, 27 - 99
Target Start/End: Original strand, 23854395 - 23854468
Alignment:
Q  27 acccatttggg-ttggtctagtggttgacttgggatcttggagtttgttcctccagaggtctcaggtttgattc 99  Q
    ||||||||||| |||| |||||||||| ||||||||||||||||||| |||||||||||||||||||| |||||    
T  23854395 acccatttggggttggcctagtggttggcttgggatcttggagtttgctcctccagaggtctcaggttcgattc 23854468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 50; E-Value: 6e-20
Query Start/End: Original strand, 35 - 150
Target Start/End: Original strand, 28646977 - 28647093
Alignment:
Q  35 gggttggtctagtggttgacttgggatcttggagtttgttcctccagaggtctcaggtttgattccctct-gtgccaatttcggtgggctaagtccatac 133  Q
    ||||||| |||||| |||||||||||||||||||| || | |||   |||||||||||| |||||||||| |||||||||||||||||| ||||| ||||    
T  28646977 gggttggcctagtgattgacttgggatcttggagtgtgcttctctcaaggtctcaggttcgattccctctggtgccaatttcggtgggc-aagtcaatac 28647075  T
Q  134 aga-tcttgctctggctt 150  Q
    ||| | ||||||||||||    
T  28647076 agagttttgctctggctt 28647093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 49; E-Value: 2e-19
Query Start/End: Original strand, 35 - 134
Target Start/End: Complemental strand, 8435888 - 8435789
Alignment:
Q  35 gggttggtctagtggttgacttgggatcttggagtttgttcctccagaggtctcaggtttgattccctct-gtgccaatttcggtgggctaagtccatac 133  Q
    |||||||||||||||||||||||||||||||||||||| ||||    || ||| ||||| |||| ||||| |||||||||||||||||| ||||||||||    
T  8435888 gggttggtctagtggttgacttgggatcttggagtttgctcctttgaagatcttaggttcgatttcctctggtgccaatttcggtgggc-aagtccatac 8435790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 44; E-Value: 2e-16
Query Start/End: Original strand, 27 - 105
Target Start/End: Original strand, 25333418 - 25333497
Alignment:
Q  27 acccatttggg-ttggtctagtggttgacttgggatcttggagtttgttcctccagaggtctcaggtttgattccctctg 105  Q
    ||||||||||| ||||  ||||||||| ||||||||||||||||||| | |||||||||||||||||| ||| |||||||    
T  25333418 acccatttggggttggcttagtggttggcttgggatcttggagtttgcttctccagaggtctcaggttcgataccctctg 25333497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 44; E-Value: 2e-16
Query Start/End: Original strand, 27 - 105
Target Start/End: Complemental strand, 31713097 - 31713018
Alignment:
Q  27 acccatttggg-ttggtctagtggttgacttgggatcttggagtttgttcctccagaggtctcaggtttgattccctctg 105  Q
    ||||||||||| |||| ||||||||||  |||||||||||||||||| ||||| |||||||||||| |||||| ||||||    
T  31713097 acccatttggggttggcctagtggttggtttgggatcttggagtttgctcctcgagaggtctcaggattgatttcctctg 31713018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 43; E-Value: 9e-16
Query Start/End: Original strand, 105 - 151
Target Start/End: Original strand, 23092175 - 23092221
Alignment:
Q  105 gtgccaatttcggtgggctaagtccatacagatcttgctctggcttt 151  Q
    |||||||||||||||||||||||||||||||| ||||||||||||||    
T  23092175 gtgccaatttcggtgggctaagtccatacagagcttgctctggcttt 23092221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 43; E-Value: 9e-16
Query Start/End: Original strand, 27 - 123
Target Start/End: Original strand, 40332098 - 40332196
Alignment:
Q  27 acccatttgg-gttggtctagtggttgacttgggatcttggagtttgttcctccagaggtctcaggtttgattccctct-gtgccaatttcggtgggct 123  Q
    |||||||||| |||||||||||||||| ||||  ||||||||||||| ||||| | |||||||||||| |||| ||||| ||| |||||||| ||||||    
T  40332098 acccatttggagttggtctagtggttggcttgaaatcttggagtttgctcctctaaaggtctcaggttcgatttcctctggtgtcaatttcgatgggct 40332196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 43; E-Value: 9e-16
Query Start/End: Original strand, 82 - 151
Target Start/End: Complemental strand, 41907659 - 41907589
Alignment:
Q  82 aggtctcaggtttgattccctctg-tgccaatttcggtgggctaagtccatacagatcttgctctggcttt 151  Q
    |||||||||||| ||||| ||||| |||||||||| ||||||||||||||||||||  |||||||||||||    
T  41907659 aggtctcaggttcgattctctctggtgccaatttcagtgggctaagtccatacagaggttgctctggcttt 41907589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 43; E-Value: 9e-16
Query Start/End: Original strand, 27 - 147
Target Start/End: Complemental strand, 43785501 - 43785379
Alignment:
Q  27 acccatttggg-ttggtctagtggttgacttgggatcttggagtttgttcctccagaggtctcaggtttgattccctc-tgtgccaatttcggtgggcta 124  Q
    ||||||||||| |||  ||| |||||| ||||||||||| ||| ||| ||||||| |||||||| ||| ||||||| | ||||| |||||| |||| |||    
T  43785501 acccatttggggttgacctaatggttggcttgggatctttgagattgctcctccaaaggtctcaagttcgattcccacttgtgctaatttcagtggacta 43785402  T
Q  125 agtccatacagatcttgctctgg 147  Q
    |||||||||||| ||| ||||||    
T  43785401 agtccatacagagcttactctgg 43785379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 42; E-Value: 0.000000000000003
Query Start/End: Original strand, 35 - 96
Target Start/End: Original strand, 28003844 - 28003905
Alignment:
Q  35 gggttggtctagtggttgacttgggatcttggagtttgttcctccagaggtctcaggtttga 96  Q
    |||||| ||||||||||| ||||||||||||||||||| ||||||||| |||| ||||||||    
T  28003844 gggttgatctagtggttggcttgggatcttggagtttgctcctccagaagtcttaggtttga 28003905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 40; E-Value: 0.00000000000005
Query Start/End: Original strand, 50 - 136
Target Start/End: Original strand, 36173058 - 36173144
Alignment:
Q  50 ttgacttgggatcttggagtttgttcctccagaggtctcaggtttgattccctc-tgtgccaatttcggtgggctaagtccatacaga 136  Q
    |||||||||||| ||||||||||||| ||   |||| ||||||| ||||||||| ||||||||||| ||||||| |||||||||||||    
T  36173058 ttgacttgggattttggagtttgttcatctcaaggtttcaggttcgattccctcttgtgccaattttggtgggc-aagtccatacaga 36173144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 39; E-Value: 0.0000000000002
Query Start/End: Original strand, 35 - 136
Target Start/End: Complemental strand, 12211728 - 12211627
Alignment:
Q  35 gggttggtctagtggttgacttgggatcttggagtttgttcctccagaggtctcaggtttgattccctct-gtgccaatttcggtgggctaagtccatac 133  Q
    ||||||| |||||||||| ||| |||||||||||| || |||||   || |||||||||||||| ||||| |||||||||||| ||| | ||||||||||    
T  12211728 gggttggcctagtggttggcttaggatcttggagtgtgctcctctcaagatctcaggtttgatttcctctggtgccaatttcgatggac-aagtccatac 12211630  T
Q  134 aga 136  Q
    |||    
T  12211629 aga 12211627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 39; E-Value: 0.0000000000002
Query Start/End: Original strand, 27 - 104
Target Start/End: Original strand, 21370596 - 21370674
Alignment:
Q  27 acccatttggg-ttggtctagtggttgacttgggatcttggagtttgttcctccagaggtctcaggtttgattccctct 104  Q
    ||||||||||| |||| ||||||||||  |||||||||||||||||  |||| |||| |||||||||| ||||||||||    
T  21370596 acccatttggggttggcctagtggttggtttgggatcttggagtttactccttcagatgtctcaggttcgattccctct 21370674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 39; E-Value: 0.0000000000002
Query Start/End: Original strand, 105 - 151
Target Start/End: Original strand, 21373789 - 21373835
Alignment:
Q  105 gtgccaatttcggtgggctaagtccatacagatcttgctctggcttt 151  Q
    |||||||||||||||||||||||| ||||||| ||||||||||||||    
T  21373789 gtgccaatttcggtgggctaagtctatacagagcttgctctggcttt 21373835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 39; E-Value: 0.0000000000002
Query Start/End: Original strand, 27 - 150
Target Start/End: Complemental strand, 23330941 - 23330816
Alignment:
Q  27 acccatttggg-ttggtctagtggttgacttgggatcttggagtttgttcctccagaggtctcaggtttgattccct-ctgtgccaatttcggtgggcta 124  Q
    ||||||||||| || | |||||||||| |||||||| || |||| || |||||   |||||||||||| || ||||| | |||||||||||||||||| |    
T  23330941 acccatttggggttagcctagtggttggcttgggattttagagtgtgctcctctcaaggtctcaggttcgactccctccggtgccaatttcggtgggc-a 23330843  T
Q  125 agtccatacagatc-ttgctctggctt 150  Q
    |||||||||||| | ||||||||||||    
T  23330842 agtccatacagagctttgctctggctt 23330816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 39; E-Value: 0.0000000000002
Query Start/End: Original strand, 43 - 120
Target Start/End: Complemental strand, 38864631 - 38864553
Alignment:
Q  43 ctagtggttgacttgggatcttggagtttgttcctccagaggtctcaggtttgattccctct-gtgccaatttcggtgg 120  Q
    ||||||||||||||| |||||| |||||||||  |||||| |||||| |||||||||| | | ||||||||||||||||    
T  38864631 ctagtggttgacttgagatctttgagtttgtttttccagaagtctcacgtttgattccttttagtgccaatttcggtgg 38864553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 38; E-Value: 0.0000000000008
Query Start/End: Original strand, 55 - 151
Target Start/End: Complemental strand, 22643515 - 22643418
Alignment:
Q  55 ttgggatcttggagtttgttcctccagaggtctcaggtttgattccctctg-tgccaatttcggtgggctaagtccatacagatcttgctctggcttt 151  Q
    ||||||||||| |||||  ||| | |||||||| | ||| |||| |||||| || |||||||||| ||||||||||||||||| ||||||||| ||||    
T  22643515 ttgggatcttgaagtttactccactagaggtcttatgttcgatttcctctgatgtcaatttcggtaggctaagtccatacagagcttgctctgacttt 22643418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 37; E-Value: 0.000000000003
Query Start/End: Original strand, 35 - 134
Target Start/End: Original strand, 1469120 - 1469219
Alignment:
Q  35 gggttggtctagtggttgacttgggatcttggagtttgttcctccagaggtctcaggtttgattccctct-gtgccaatttcggtgggctaagtccatac 133  Q
    ||||||| |||||||||||||||  |||||||||||||||| ||   |||||||||||| |||| ||| |  ||||||||||| ||||| ||||||||||    
T  1469120 gggttggcctagtggttgacttgaaatcttggagtttgttcatctcaaggtctcaggttcgatttcctttaatgccaatttcgatgggc-aagtccatac 1469218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 35; E-Value: 0.00000000005
Query Start/End: Original strand, 109 - 151
Target Start/End: Original strand, 3851840 - 3851882
Alignment:
Q  109 caatttcggtgggctaagtccatacagatcttgctctggcttt 151  Q
    |||||||||||||||||||||||| ||| ||||||||||||||    
T  3851840 caatttcggtgggctaagtccatatagagcttgctctggcttt 3851882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 35; E-Value: 0.00000000005
Query Start/End: Original strand, 74 - 127
Target Start/End: Complemental strand, 35173186 - 35173132
Alignment:
Q  74 tcctccagaggtctcaggtttgattccctctg-tgccaatttcggtgggctaagt 127  Q
    ||||||| ||||||||||||||||| |||||| || |||||||||||||||||||    
T  35173186 tcctccaaaggtctcaggtttgatttcctctgatgtcaatttcggtgggctaagt 35173132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #61
Raw Score: 31; E-Value: 0.00000001
Query Start/End: Original strand, 43 - 77
Target Start/End: Complemental strand, 24686166 - 24686132
Alignment:
Q  43 ctagtggttgacttgggatcttggagtttgttcct 77  Q
    |||||||||||||||||||||||||||||| ||||    
T  24686166 ctagtggttgacttgggatcttggagtttgctcct 24686132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #62
Raw Score: 29; E-Value: 0.0000002
Query Start/End: Original strand, 33 - 125
Target Start/End: Complemental strand, 41519333 - 41519238
Alignment:
Q  33 ttgggttggtctagtggt--tgacttgggatcttggagtttgttcctccaga-ggtctcaggtttgattccctctgtgccaatttcggtgggctaa 125  Q
    ||||||||| ||||||||  ||||||||||| | ||||| || ||||||  | ||||||||||| | ||| ||||||| |||||| ||||||||||    
T  41519333 ttgggttggcctagtggtattgacttgggatttaggagtgtgctcctcctcaaggtctcaggttcgcttctctctgtgtcaatttaggtgggctaa 41519238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #63
Raw Score: 28; E-Value: 0.0000008
Query Start/End: Original strand, 82 - 125
Target Start/End: Original strand, 11700224 - 11700267
Alignment:
Q  82 aggtctcaggtttgattccctctgtgccaatttcggtgggctaa 125  Q
    |||||||||||| ||||| ||||||||||||||  |||||||||    
T  11700224 aggtctcaggttcgattctctctgtgccaatttgagtgggctaa 11700267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 91; Significance: 2e-44; HSPs: 32)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 91; E-Value: 2e-44
Query Start/End: Original strand, 27 - 151
Target Start/End: Complemental strand, 654348 - 654222
Alignment:
Q  27 acccatttgggtt-ggtctagtggttgacttgggatcttggagtttgttcctccagaggtctcaggtttgattccctct-gtgccaatttcggtgggcta 124  Q
    ||||||||||||| || ||||||| |||||||||||||||||||||| |||||||||||||||||||| |||||||||| ||||||||||||||||||||    
T  654348 acccatttgggtttggcctagtggctgacttgggatcttggagtttgctcctccagaggtctcaggttcgattccctctggtgccaatttcggtgggcta 654249  T
Q  125 agtccatacagatcttgctctggcttt 151  Q
    |||||||||||| ||||||||||||||    
T  654248 agtccatacagagcttgctctggcttt 654222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 87; E-Value: 5e-42
Query Start/End: Original strand, 27 - 151
Target Start/End: Complemental strand, 15360300 - 15360174
Alignment:
Q  27 acccatttggg-ttggtctagtggttgacttgggatcttggagtttgttcctccagaggtctcaggtttgattccctct-gtgccaatttcggtgggcta 124  Q
    ||||||||||| |||| |||||||||| ||||||||||||||||||| ||||||| |||||||||||| |||||||||| ||||||||||||||||||||    
T  15360300 acccatttggggttggcctagtggttggcttgggatcttggagtttgctcctccaaaggtctcaggttcgattccctctggtgccaatttcggtgggcta 15360201  T
Q  125 agtccatacagatcttgctctggcttt 151  Q
    |||||||||||| ||||||||||||||    
T  15360200 agtccatacagagcttgctctggcttt 15360174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 86; E-Value: 2e-41
Query Start/End: Original strand, 35 - 151
Target Start/End: Original strand, 11448875 - 11448992
Alignment:
Q  35 gggttggtctagtggttgacttgggatcttggagtttgttcctccagaggtctcaggtttgattccctct-gtgccaatttcggtgggctaagtccatac 133  Q
    ||||||| |||||||||| ||||||||||||||||||| |||||||||||||||||||| ||||| |||| |||||||||||||||||||||||||||||    
T  11448875 gggttggcctagtggttggcttgggatcttggagtttgctcctccagaggtctcaggttcgattctctctggtgccaatttcggtgggctaagtccatac 11448974  T
Q  134 agatcttgctctggcttt 151  Q
    ||| ||||||||||||||    
T  11448975 agagcttgctctggcttt 11448992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 83; E-Value: 1e-39
Query Start/End: Original strand, 27 - 151
Target Start/End: Original strand, 12591632 - 12591758
Alignment:
Q  27 acccatttggg-ttggtctagtggttgacttgggatcttggagtttgttcctccagaggtctcaggtttgattccctct-gtgccaatttcggtgggcta 124  Q
    ||||||||||| |||| |||||||||| ||||||||||||||||||| ||||||| |||||||||||| |||||||||| ||||||||||| ||||||||    
T  12591632 acccatttggggttggcctagtggttggcttgggatcttggagtttgctcctccaaaggtctcaggttcgattccctctcgtgccaatttcagtgggcta 12591731  T
Q  125 agtccatacagatcttgctctggcttt 151  Q
    |||||||||||| ||||||||||||||    
T  12591732 agtccatacagagcttgctctggcttt 12591758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 83; E-Value: 1e-39
Query Start/End: Original strand, 27 - 151
Target Start/End: Original strand, 34147341 - 34147467
Alignment:
Q  27 acccatttggg-ttggtctagtggttgacttgggatcttggagtttgttcctccagaggtctcaggtttgattccctct-gtgccaatttcggtgggcta 124  Q
    ||||||||||| |||| |||||||||| ||||||||||||||||||| || |||||| |||||||||| |||||||||| ||||||||||||||||||||    
T  34147341 acccatttggggttggcctagtggttggcttgggatcttggagtttgctcttccagaagtctcaggttcgattccctctggtgccaatttcggtgggcta 34147440  T
Q  125 agtccatacagatcttgctctggcttt 151  Q
    |||||||||||| ||||||||||||||    
T  34147441 agtccatacagagcttgctctggcttt 34147467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 83; E-Value: 1e-39
Query Start/End: Original strand, 27 - 151
Target Start/End: Original strand, 34159957 - 34160083
Alignment:
Q  27 acccatttggg-ttggtctagtggttgacttgggatcttggagtttgttcctccagaggtctcaggtttgattccctct-gtgccaatttcggtgggcta 124  Q
    ||||||||||| |||| |||||||||| ||||||||||||||||||| || |||||| |||||||||| |||||||||| ||||||||||||||||||||    
T  34159957 acccatttggggttggcctagtggttggcttgggatcttggagtttgctcttccagaagtctcaggttcgattccctctggtgccaatttcggtgggcta 34160056  T
Q  125 agtccatacagatcttgctctggcttt 151  Q
    |||||||||||| ||||||||||||||    
T  34160057 agtccatacagagcttgctctggcttt 34160083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 79; E-Value: 3e-37
Query Start/End: Original strand, 27 - 151
Target Start/End: Original strand, 9238970 - 9239096
Alignment:
Q  27 acccatttggg-ttggtctagtggttgacttgggatcttggagtttgttcctccagaggtctcaggtttgattccctct-gtgccaatttcggtgggcta 124  Q
    ||||||||||| |||| |||||||||| ||||||||||||||||||| |||||||||||||||||||| |||||||||| ||||||||||||||||| ||    
T  9238970 acccatttggggttggcctagtggttggcttgggatcttggagtttgctcctccagaggtctcaggttcgattccctctggtgccaatttcggtgggtta 9239069  T
Q  125 agtccatacagatcttgctctggcttt 151  Q
    |||||||| ||| |||||| |||||||    
T  9239070 agtccatatagagcttgctttggcttt 9239096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 75; E-Value: 7e-35
Query Start/End: Original strand, 27 - 151
Target Start/End: Complemental strand, 3222836 - 3222711
Alignment:
Q  27 acccatttggg-ttggtctagtggttgacttgggatcttggagtttgttcctccagaggtctcaggtttgattccctctg-tgccaatttcggtgggcta 124  Q
    ||||||||||| |||| |||||||||| |||||||||||| |||||| ||||| |||||||||||||| ||||||||||| |||||||||||||||||||    
T  3222836 acccatttggggttggcctagtggttggcttgggatcttgcagtttgctcctc-agaggtctcaggttcgattccctctggtgccaatttcggtgggcta 3222738  T
Q  125 agtccatacagatcttgctctggcttt 151  Q
    |||||||||||| ||||||||| ||||    
T  3222737 agtccatacagagcttgctctgtcttt 3222711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 75; E-Value: 7e-35
Query Start/End: Original strand, 27 - 151
Target Start/End: Complemental strand, 17081256 - 17081130
Alignment:
Q  27 acccatttg-ggttggtctagtggttgacttgggatcttggagtttgttcctccagaggtctcaggtttgattccctct-gtgccaatttcggtgggcta 124  Q
    ||||||||| |||| |||||||||||| ||| ||||||||||||||| ||||||||| |||||| |||||||||||||| ||| ||||||||||||||||    
T  17081256 acccatttgaggttagtctagtggttggcttaggatcttggagtttgctcctccagatgtctcaagtttgattccctctggtgtcaatttcggtgggcta 17081157  T
Q  125 agtccatacagatcttgctctggcttt 151  Q
    |||||||||||| ||||||||| ||||    
T  17081156 agtccatacagagcttgctctgacttt 17081130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 73; E-Value: 1e-33
Query Start/End: Original strand, 56 - 151
Target Start/End: Original strand, 1344960 - 1345056
Alignment:
Q  56 tgggatcttggagtttgttcctccagaggtctcaggtttgattccctct-gtgccaatttcggtgggctaagtccatacagatcttgctctggcttt 151  Q
    |||||||||||||||||||||||||||||||||||||| |||||||||| ||||||||||| |||||||||||||||||| | ||||||||||||||    
T  1344960 tgggatcttggagtttgttcctccagaggtctcaggttcgattccctctggtgccaatttcagtgggctaagtccatacaaagcttgctctggcttt 1345056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 71; E-Value: 2e-32
Query Start/End: Original strand, 27 - 151
Target Start/End: Complemental strand, 5360273 - 5360147
Alignment:
Q  27 acccatttgg-gttggtctagtggttgacttgggatcttggagtttgttcctccagaggtctcaggtttgattccctct-gtgccaatttcggtgggcta 124  Q
    |||||||||| ||||| || ||||||| ||||||||||||||||||| | ||| |||||||||||||| ||||||||||  |||||||||||||||||||    
T  5360273 acccatttggagttggcctggtggttggcttgggatcttggagtttgcttctcaagaggtctcaggttcgattccctctaatgccaatttcggtgggcta 5360174  T
Q  125 agtccatacagatcttgctctggcttt 151  Q
    |||||||||||| ||||||||| ||||    
T  5360173 agtccatacagagcttgctctgacttt 5360147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 70; E-Value: 7e-32
Query Start/End: Original strand, 35 - 151
Target Start/End: Complemental strand, 21982513 - 21982396
Alignment:
Q  35 gggttggtctagtggttgacttgggatcttggagtttgttcctccagaggtctcaggtttgattccctct-gtgccaatttcggtgggctaagtccatac 133  Q
    ||||||| |||||||||| |||||||||||| |||||| |||||||||||||| ||||| |||||||  | ||||||||||| |||||||||||||||||    
T  21982513 gggttggcctagtggttggcttgggatcttgaagtttgctcctccagaggtctgaggttcgattcccgatggtgccaatttcagtgggctaagtccatac 21982414  T
Q  134 agatcttgctctggcttt 151  Q
    ||| ||||||||||||||    
T  21982413 agagcttgctctggcttt 21982396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 67; E-Value: 4e-30
Query Start/End: Original strand, 27 - 151
Target Start/End: Original strand, 11007160 - 11007286
Alignment:
Q  27 acccatttggg-ttggtctagtggttgacttgggatcttggagtttgttcctccagaggtctcaggtttgattccctctg-tgccaatttcggtgggcta 124  Q
    ||||||||||| ||| ||||||||||| ||||||||||||||||||| ||||||| |||||||||||| ||||| ||||| |  ||||||||||||||||    
T  11007160 acccatttggggttgatctagtggttggcttgggatcttggagtttgctcctccaaaggtctcaggttcgattcactctgctctcaatttcggtgggcta 11007259  T
Q  125 agtccatacagatcttgctctggcttt 151  Q
    |||||||||| | |||||||| |||||    
T  11007260 agtccatacaaagcttgctctagcttt 11007286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 67; E-Value: 4e-30
Query Start/End: Original strand, 27 - 151
Target Start/End: Complemental strand, 21148712 - 21148586
Alignment:
Q  27 acccatttgg-gttggtctagtggttgacttgggatcttggagtttgttcctccagaggtctcaggtttgattccctct-gtgccaatttcggtgggcta 124  Q
    |||||||||| ||||| |||||||||| ||||||||||||||||||| |  | ||||||||||| ||| |||||||||| |||||||||||| |||||||    
T  21148712 acccatttggagttggcctagtggttggcttgggatcttggagtttgctttttcagaggtctcaagttcgattccctctagtgccaatttcgatgggcta 21148613  T
Q  125 agtccatacagatcttgctctggcttt 151  Q
    |||||||||||| ||||||||| ||||    
T  21148612 agtccatacagagcttgctctgacttt 21148586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 67; E-Value: 4e-30
Query Start/End: Original strand, 27 - 151
Target Start/End: Original strand, 28672062 - 28672188
Alignment:
Q  27 acccatttggg-ttggtctagtggttgacttgggatcttggagtttgttcctccagaggtctcaggtttgattccctct-gtgccaatttcggtgggcta 124  Q
    ||||||||||| |||| ||||||||||||||| |||||||||||||| ||||| |||||||| ||||| |||||||||| ||| |||||| |||||||||    
T  28672062 acccatttggggttggcctagtggttgacttgagatcttggagtttgctcctctagaggtcttaggttcgattccctctggtgtcaattttggtgggcta 28672161  T
Q  125 agtccatacagatcttgctctggcttt 151  Q
    |||||||||||| |||| | |||||||    
T  28672162 agtccatacagagcttgttttggcttt 28672188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 66; E-Value: 2e-29
Query Start/End: Original strand, 35 - 151
Target Start/End: Original strand, 9843942 - 9844059
Alignment:
Q  35 gggttggtctagtggttgacttgggatcttggagtttgttcctccagaggtctcaggtttgattccctct-gtgccaatttcggtgggctaagtccatac 133  Q
    |||||||||||||||||| ||||||||||||||||||| ||||| |||||||||||||| || | ||||| ||| |||||| |||||| |||||||||||    
T  9843942 gggttggtctagtggttggcttgggatcttggagtttgctcctctagaggtctcaggttcgacttcctctggtgtcaattttggtgggttaagtccatac 9844041  T
Q  134 agatcttgctctggcttt 151  Q
    ||| |||| |||||||||    
T  9844042 agagcttgttctggcttt 9844059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 66; E-Value: 2e-29
Query Start/End: Original strand, 27 - 138
Target Start/End: Original strand, 13753235 - 13753348
Alignment:
Q  27 acccatttggg-ttggtctagtggttgacttgggatcttggagtttgttcctccagaggtctcaggtttgattccctct-gtgccaatttcggtgggcta 124  Q
    ||||||||||| |||| |||||||||| ||| ||||||||||||||| ||||||||||||||||||||  |||| |||| ||||||||||||||||||||    
T  13753235 acccatttggggttggcctagtggttggctttggatcttggagtttgctcctccagaggtctcaggttcaattctctctggtgccaatttcggtgggcta 13753334  T
Q  125 agtccatacagatc 138  Q
    | ||||||||||||    
T  13753335 aatccatacagatc 13753348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 63; E-Value: 1e-27
Query Start/End: Original strand, 74 - 151
Target Start/End: Original strand, 12390468 - 12390546
Alignment:
Q  74 tcctccagaggtctcaggtttgattccctctg-tgccaatttcggtgggctaagtccatacagatcttgctctggcttt 151  Q
    |||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||| ||||||||||||||    
T  12390468 tcctccagaggtctcaggttcgattccctctggtgccaatttcggtgggctaagtccatacagagcttgctctggcttt 12390546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 55; E-Value: 6e-23
Query Start/End: Original strand, 47 - 132
Target Start/End: Original strand, 14212908 - 14212994
Alignment:
Q  47 tggttgacttgggatcttggagtttgttcctccagaggtctcaggtttgattccctct-gtgccaatttcggtgggctaagtccata 132  Q
    |||||| || |||||||||||||||| |||||||||||||||||||| |||||||||| |||||||||| | |||||||||||||||    
T  14212908 tggttggctcgggatcttggagtttgctcctccagaggtctcaggttcgattccctctggtgccaattttgatgggctaagtccata 14212994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 54; E-Value: 2e-22
Query Start/End: Original strand, 43 - 151
Target Start/End: Complemental strand, 9690823 - 9690714
Alignment:
Q  43 ctagtggttgacttgggatcttggagtttgttcctccagaggtctcaggtttgattccctct-gtgccaatttcggtgggctaagtccatacagatcttg 141  Q
    ||||||||||  ||| ||| |||||||||| || ||||||||||| ||||| |||| | ||| ||| |||||||||||||||||||||||||||| ||||    
T  9690823 ctagtggttggtttgagattttggagtttgctcttccagaggtcttaggttcgatttcttctagtgtcaatttcggtgggctaagtccatacagagcttg 9690724  T
Q  142 ctctggcttt 151  Q
    ||||||||||    
T  9690723 ctctggcttt 9690714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 53; E-Value: 9e-22
Query Start/End: Original strand, 27 - 113
Target Start/End: Original strand, 22576062 - 22576150
Alignment:
Q  27 acccatttggg-ttggtctagtggttgacttgggatcttggagtttgttcctccagaggtctcaggtttgattccctct-gtgccaatt 113  Q
    ||||||||||| |||| |||||||||| ||||||||||||||||||| ||||||||||||||||| || |||||||||| |||||||||    
T  22576062 acccatttggggttggcctagtggttggcttgggatcttggagtttgctcctccagaggtctcagattcgattccctctggtgccaatt 22576150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 52; E-Value: 4e-21
Query Start/End: Original strand, 27 - 136
Target Start/End: Original strand, 9208247 - 9208357
Alignment:
Q  27 acccatttggg-ttggtctagtggttgacttgggatcttggagtttgttcctccagaggtctcaggtttgattccctct-gtgccaatttcggtgggcta 124  Q
    ||||||||||| ||| |||||||||||  |||||||||||||||||| |||||   |||||||||||| ||||||| || |||||||||||||||||| |    
T  9208247 acccatttggggttgttctagtggttggattgggatcttggagtttgctcctctcaaggtctcaggttcgattccccctggtgccaatttcggtgggc-a 9208345  T
Q  125 agtccatacaga 136  Q
    ||||||||||||    
T  9208346 agtccatacaga 9208357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 52; E-Value: 4e-21
Query Start/End: Original strand, 45 - 143
Target Start/End: Original strand, 11840915 - 11841014
Alignment:
Q  45 agtggttgacttgggatcttggagtttgttcctccagaggtctcaggtttgattccctct-gtgccaatttcggtgggctaagtccatacagatcttgct 143  Q
    |||||||| |||||||| || || |||| |||||||||||||||||| | |||||||||| ||||||||||||||||| |||||||||||| | ||||||    
T  11840915 agtggttggcttgggatattagaatttgctcctccagaggtctcaggctcgattccctctggtgccaatttcggtgggttaagtccatacaaagcttgct 11841014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 49; E-Value: 2e-19
Query Start/End: Original strand, 48 - 151
Target Start/End: Complemental strand, 28968222 - 28968118
Alignment:
Q  48 ggttgacttgggatcttggagtttgttcctccagaggtctcaggtttgattccctct-gtgccaatttcggtgggctaagtccatacagatcttgctctg 146  Q
    ||||| ||||||||||||||||||| ||||| ||||||||||| || ||||| |||| | | ||||||||||||| |||||||||||||| ||| |||||    
T  28968222 ggttggcttgggatcttggagtttgctcctctagaggtctcagattcgattctctctagcgtcaatttcggtgggttaagtccatacagaacttactctg 28968123  T
Q  147 gcttt 151  Q
     ||||    
T  28968122 ccttt 28968118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 45; E-Value: 6e-17
Query Start/End: Original strand, 46 - 125
Target Start/End: Complemental strand, 17706489 - 17706409
Alignment:
Q  46 gtggttgacttgggatcttggagtttgttcctccagaggtctcaggtttgattccctct-gtgccaatttcggtgggctaa 125  Q
    ||||||||||||||||||||||||||| ||||||||| |||||| ||| |||||| ||| ||| |||||||||||| ||||    
T  17706489 gtggttgacttgggatcttggagtttgctcctccagaagtctcaagttcgattccttctggtgtcaatttcggtggactaa 17706409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 45; E-Value: 6e-17
Query Start/End: Original strand, 27 - 140
Target Start/End: Original strand, 33499469 - 33499584
Alignment:
Q  27 acccatttggg-ttggtctagtggttgacttgggatcttggagtttgttcctccagaggtctcaggtt-tgattccctct-gtgccaatttcggtgggct 123  Q
    ||||||||||| |||| || ||||||| ||||||||||||||||||| |||||   ||||||||||||  |||||||||| ||| |||||||||||||||    
T  33499469 acccatttggggttggcctggtggttggcttgggatcttggagtttgctcctctcaaggtctcaggttcagattccctctggtgtcaatttcggtgggct 33499568  T
Q  124 aagtccatacagatctt 140  Q
     |||||||||| |||||    
T  33499569 -agtccatacaaatctt 33499584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 44; E-Value: 2e-16
Query Start/End: Original strand, 27 - 136
Target Start/End: Complemental strand, 33718660 - 33718549
Alignment:
Q  27 acccattt-gggttggtctagtggttgacttgggatcttggagtttgttcctccagaggtctcaggtttgattccctct-gtgccaatttcggtgggcta 124  Q
    |||||||| ||||||||||||||||||  |||||||||||||||||  | |||||||| ||||||||| ||||| |||| |||| ||||| ||||  |||    
T  33718660 acccatttagggttggtctagtggttggtttgggatcttggagtttacttctccagagatctcaggttcgattctctctggtgcaaattttggtgaacta 33718561  T
Q  125 agtccatacaga 136  Q
    ||| ||||||||    
T  33718560 agtacatacaga 33718549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 39; E-Value: 0.0000000000002
Query Start/End: Original strand, 60 - 149
Target Start/End: Original strand, 31039049 - 31039139
Alignment:
Q  60 atcttggagtttgttcctccagaggtctcaggtttgattccctct-gtgccaatttcggtgggctaagtccatacagatcttgctctggct 149  Q
    ||||||||||||| ||| ||| || ||||| |||||||||||||| ||  |||||||| |||||||||||||||||||  ||||| |||||    
T  31039049 atcttggagtttgctccaccaaagatctcaagtttgattccctctagtatcaatttcgatgggctaagtccatacagagtttgctatggct 31039139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 38; E-Value: 0.0000000000008
Query Start/End: Original strand, 35 - 131
Target Start/End: Original strand, 8479316 - 8479412
Alignment:
Q  35 gggttggtctagtggttgacttgggatcttggagtttgttcctccagaggtctcaggtttgattccctct-gtgccaatttcggtgggctaagtccat 131  Q
    ||||||| ||||||||||||||||||||||||||| || |||||   || | ||||||| |||| ||||| ||| |||||||||||||| ||||||||    
T  8479316 gggttggcctagtggttgacttgggatcttggagtgtgctcctcttaagatttcaggttcgatttcctctggtgtcaatttcggtgggc-aagtccat 8479412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 35; E-Value: 0.00000000005
Query Start/End: Original strand, 55 - 136
Target Start/End: Complemental strand, 17149629 - 17149548
Alignment:
Q  55 ttgggatcttggagtttgttcctccagaggtctcaggtttgattccctct-gtgccaatttcggtgggctaagtccatacaga 136  Q
    ||||||||||||||| || |||||   |||||||||||| |||||||||| |||| ||||||||| ||| |||||||||||||    
T  17149629 ttgggatcttggagtgtgctcctctcaaggtctcaggttcgattccctctggtgctaatttcggttggc-aagtccatacaga 17149548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 34; E-Value: 0.0000000002
Query Start/End: Original strand, 35 - 134
Target Start/End: Original strand, 17420869 - 17420969
Alignment:
Q  35 gggttggtctagtggttgacttgggatcttggagtttgttcctccagaggtctcaggtttgatt-ccctc-tgtgccaatttcggtgggctaagtccata 132  Q
    ||||||||||| ||||||||||||||||||||||| |  ||||    ||||||  ||||||||| ||||| |||||||||||||||||| ||||| ||||    
T  17420869 gggttggtctaatggttgacttgggatcttggagtgtactcctttcaaggtctttggtttgattcccctcttgtgccaatttcggtggg-taagttcata 17420967  T
Q  133 ca 134  Q
    ||    
T  17420968 ca 17420969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 30; E-Value: 0.00000005
Query Start/End: Original strand, 27 - 103
Target Start/End: Complemental strand, 3625940 - 3625863
Alignment:
Q  27 acccatttggg-ttggtctagtggttgacttgggatcttggagtttgttcctccagaggtctcaggtttgattccctc 103  Q
    ||||||||||| ||||| |||||||| | |||| || ||  |||||| ||||||| || |||||||||||||||||||    
T  3625940 acccatttggggttggtttagtggttaatttggaattttaaagtttggtcctccaaagatctcaggtttgattccctc 3625863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 91; Significance: 2e-44; HSPs: 55)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 91; E-Value: 2e-44
Query Start/End: Original strand, 27 - 151
Target Start/End: Complemental strand, 44946255 - 44946129
Alignment:
Q  27 acccatttggg-ttggtctagtggttgacttgggatcttggagtttgttcctccagaggtctcaggtttgattccctct-gtgccaatttcggtgggcta 124  Q
    ||||||||||| ||||||||||||||| ||||||||||||||||||| |||||||||||||||||||| |||||||| | ||||||||||||||||||||    
T  44946255 acccatttggggttggtctagtggttggcttgggatcttggagtttgctcctccagaggtctcaggttcgattccctttggtgccaatttcggtgggcta 44946156  T
Q  125 agtccatacagatcttgctctggcttt 151  Q
    |||||||||||| ||||||||||||||    
T  44946155 agtccatacagaacttgctctggcttt 44946129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 83; E-Value: 1e-39
Query Start/End: Original strand, 27 - 151
Target Start/End: Complemental strand, 33827775 - 33827649
Alignment:
Q  27 acccatttggg-ttggtctagtggttgacttgggatcttggagtttgttcctccagaggtctcaggtttgattccctct-gtgccaatttcggtgggcta 124  Q
    ||||||||||| |||| |||||||||| ||||||||||||||| ||| |||||||||||||||||||| |||||||||| |||||||||||| |||||||    
T  33827775 acccatttggggttggcctagtggttggcttgggatcttggagattgctcctccagaggtctcaggttcgattccctctggtgccaatttcgttgggcta 33827676  T
Q  125 agtccatacagatcttgctctggcttt 151  Q
    |||||||||||| ||||||||||||||    
T  33827675 agtccatacagagcttgctctggcttt 33827649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 82; E-Value: 5e-39
Query Start/End: Original strand, 35 - 151
Target Start/End: Original strand, 17324770 - 17324887
Alignment:
Q  35 gggttggtctagtggttgacttgggatcttggagtttgttcctccagaggtctcaggtttgattccctct-gtgccaatttcggtgggctaagtccatac 133  Q
    ||||||| ||||||||||  |||| ||||||||||||| |||||||||||||||||||| |||||||||| |||||||||||||||||||||||||||||    
T  17324770 gggttggcctagtggttggtttggtatcttggagtttgctcctccagaggtctcaggttcgattccctctggtgccaatttcggtgggctaagtccatac 17324869  T
Q  134 agatcttgctctggcttt 151  Q
    ||| ||||||||||||||    
T  17324870 agagcttgctctggcttt 17324887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 82; E-Value: 5e-39
Query Start/End: Original strand, 43 - 151
Target Start/End: Original strand, 27290600 - 27290709
Alignment:
Q  43 ctagtggttgacttgggatcttggagtttgttcctccagaggtctcaggtttgattccc-tctgtgccaatttcggtgggctaagtccatacagatcttg 141  Q
    |||||||||| ||||||||||||||||||| |||||||||||||||||||| ||||||| || |||||||||||||||||||||||||||||||| ||||    
T  27290600 ctagtggttggcttgggatcttggagtttgctcctccagaggtctcaggttcgattcccttcggtgccaatttcggtgggctaagtccatacagagcttg 27290699  T
Q  142 ctctggcttt 151  Q
    ||||||||||    
T  27290700 ctctggcttt 27290709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 81; E-Value: 2e-38
Query Start/End: Original strand, 44 - 151
Target Start/End: Complemental strand, 10582174 - 10582066
Alignment:
Q  44 tagtggttgacttgggatcttggagtttgttcctccagaggtctcaggtttgattccctct-gtgccaatttcggtgggctaagtccatacagatcttgc 142  Q
    ||||||||| ||||||||||||||||||| |||||||||||||||||||| |||||||||| |||||||||||||||||||||||||||||||| |||||    
T  10582174 tagtggttggcttgggatcttggagtttgctcctccagaggtctcaggttcgattccctctggtgccaatttcggtgggctaagtccatacagagcttgc 10582075  T
Q  143 tctggcttt 151  Q
    ||| |||||    
T  10582074 tctagcttt 10582066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 79; E-Value: 3e-37
Query Start/End: Original strand, 27 - 151
Target Start/End: Complemental strand, 11941412 - 11941286
Alignment:
Q  27 acccatttggg-ttggtctagtggttgacttgggatcttggagtttgttcctccagaggtctcaggtttgattccctct-gtgccaatttcggtgggcta 124  Q
    ||||||||||| ||||||||||||||| ||||||||||||||||||| ||||||||||||||||||||  ||||||| | |||||||||| |||||| ||    
T  11941412 acccatttggggttggtctagtggttggcttgggatcttggagtttgctcctccagaggtctcaggttcaattccctatggtgccaattttggtgggtta 11941313  T
Q  125 agtccatacagatcttgctctggcttt 151  Q
    |||||||||||| ||||||||||||||    
T  11941312 agtccatacagagcttgctctggcttt 11941286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 79; E-Value: 3e-37
Query Start/End: Original strand, 27 - 151
Target Start/End: Original strand, 15037954 - 15038080
Alignment:
Q  27 acccatttggg-ttggtctagtggttgacttgggatcttggagtttgttcctccagaggtctcaggtttgattccctct-gtgccaatttcggtgggcta 124  Q
    ||||||||||| |||| ||||||||||||| |||||||||||||||| ||||||| |||||||||||| |||||||| | ||||||||||||||||||||    
T  15037954 acccatttggggttggcctagtggttgactcgggatcttggagtttgctcctccaaaggtctcaggttcgattccctttggtgccaatttcggtgggcta 15038053  T
Q  125 agtccatacagatcttgctctggcttt 151  Q
    |||||||||||| |||||| |||||||    
T  15038054 agtccatacagagcttgctttggcttt 15038080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 79; E-Value: 3e-37
Query Start/End: Original strand, 27 - 151
Target Start/End: Complemental strand, 30467032 - 30466906
Alignment:
Q  27 acccatttggg-ttggtctagtggttgacttgggatcttggagtttgttcctccagaggtctcaggtttgattccctctg-tgccaatttcggtgggcta 124  Q
    ||||||||||| |||| ||||||||||  ||||||| |||||||||||||||| |||||||||||||| ||||| ||||| |||||||||||||||||||    
T  30467032 acccatttggggttggcctagtggttggtttgggatattggagtttgttcctctagaggtctcaggttcgattctctctgctgccaatttcggtgggcta 30466933  T
Q  125 agtccatacagatcttgctctggcttt 151  Q
    |||||||||||| ||||||||||||||    
T  30466932 agtccatacagagcttgctctggcttt 30466906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 78; E-Value: 1e-36
Query Start/End: Original strand, 35 - 151
Target Start/End: Complemental strand, 44976347 - 44976230
Alignment:
Q  35 gggttggtctagtggttgacttgggatcttggagtttgttcctccagaggtctcaggtttgattccctct-gtgccaatttcggtgggctaagtccatac 133  Q
    ||||||| |||||||||| ||||||||||||| ||||| |||||||||||||||||||| |||||||||| |||||||||| ||||||||||||||||||    
T  44976347 gggttggcctagtggttggcttgggatcttggggtttgctcctccagaggtctcaggttcgattccctctggtgccaattttggtgggctaagtccatac 44976248  T
Q  134 agatcttgctctggcttt 151  Q
    |||  |||||||||||||    
T  44976247 agagtttgctctggcttt 44976230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 76; E-Value: 2e-35
Query Start/End: Original strand, 27 - 132
Target Start/End: Original strand, 25293161 - 25293268
Alignment:
Q  27 acccatttg-ggttggtctagtggttgacttgggatcttggagtttgttcctccagaggtctcaggtttgattccctct-gtgccaatttcggtgggcta 124  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||| |||||||||| ||||||||||||||||||||    
T  25293161 acccatttgaggttggtctagtggttgacttgggatcttggagtttgctcctcgagaggtctcaggttcgattccctctggtgccaatttcggtgggcta 25293260  T
Q  125 agtccata 132  Q
    ||| ||||    
T  25293261 agttcata 25293268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 71; E-Value: 2e-32
Query Start/End: Original strand, 27 - 151
Target Start/End: Original strand, 24195999 - 24196125
Alignment:
Q  27 acccatttggg-ttggtctagtggttgacttgggatcttggagtttgttcctccagaggtctcaggtttgattccctct-gtgccaatttcggtgggcta 124  Q
    ||||||||||| |||| |||||||||| |||||||| |||| ||| | |||||||||||| ||||||| |||||||||| |||| |||||||||||||||    
T  24195999 acccatttggggttggcctagtggttggcttgggattttggggttcgctcctccagaggtttcaggttcgattccctctggtgcaaatttcggtgggcta 24196098  T
Q  125 agtccatacagatcttgctctggcttt 151  Q
    |||||||||||| ||||||||||||||    
T  24196099 agtccatacagaacttgctctggcttt 24196125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 69; E-Value: 3e-31
Query Start/End: Original strand, 44 - 151
Target Start/End: Original strand, 41314005 - 41314113
Alignment:
Q  44 tagtggttgacttgggatcttggagtttgttcctccagaggtctcaggtttgattccctct-gtgccaatttcggtgggctaagtccatacagatcttgc 142  Q
    |||||||||  |||||||||||||||||| |||||||||||||||||||| |||||||||| ||| |||||||||||||||||||| ||||||| |||||    
T  41314005 tagtggttggtttgggatcttggagtttgctcctccagaggtctcaggttcgattccctctggtgtcaatttcggtgggctaagtctatacagagcttgc 41314104  T
Q  143 tctggcttt 151  Q
    |||| ||||    
T  41314105 tctgacttt 41314113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 68; E-Value: 1e-30
Query Start/End: Original strand, 27 - 129
Target Start/End: Complemental strand, 18976627 - 18976524
Alignment:
Q  27 acccatttggg-ttggtctagtggttgacttgggatcttggagtttgttcctccagaggtctcaggtttgattccctctgtgccaatttcggtgggctaa 125  Q
    ||||||||||| |||| |||||||||| ||||||||||||||||||| |||||||||||||||| ||| ||||||||||| |||||||||||||| ||||    
T  18976627 acccatttggggttggcctagtggttggcttgggatcttggagtttgctcctccagaggtctcatgttcgattccctctgagccaatttcggtggactaa 18976528  T
Q  126 gtcc 129  Q
    ||||    
T  18976527 gtcc 18976524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 65; E-Value: 6e-29
Query Start/End: Original strand, 48 - 151
Target Start/End: Original strand, 1191530 - 1191634
Alignment:
Q  48 ggttgacttgggatcttggagtttgttcctccagaggtctcaggtttgattccctct-gtgccaatttcggtgggctaagtccatacagatcttgctctg 146  Q
    ||||| |||| |||||||||||||| |||||||||||||||||||| | |||||||| || |||||||||||||||||||||||||||||  ||||||||    
T  1191530 ggttggcttgagatcttggagtttgctcctccagaggtctcaggttcgtttccctctagtaccaatttcggtgggctaagtccatacagagtttgctctg 1191629  T
Q  147 gcttt 151  Q
    |||||    
T  1191630 gcttt 1191634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 65; E-Value: 6e-29
Query Start/End: Original strand, 48 - 151
Target Start/End: Complemental strand, 43374505 - 43374401
Alignment:
Q  48 ggttgacttgggatcttggagtttgttcctccagaggtctcaggtttgattccctct-gtgccaatttcggtgggctaagtccatacagatcttgctctg 146  Q
    ||||| ||||||||||||||||||| |||| ||||||||||||||| |||||||||| |||||||||||||||||||||||  ||||| | |||||||||    
T  43374505 ggttggcttgggatcttggagtttgctccttcagaggtctcaggttcgattccctctggtgccaatttcggtgggctaagtttatacaaagcttgctctg 43374406  T
Q  147 gcttt 151  Q
    |||||    
T  43374405 gcttt 43374401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 63; E-Value: 1e-27
Query Start/End: Original strand, 62 - 151
Target Start/End: Original strand, 35171831 - 35171921
Alignment:
Q  62 cttggagtttgttcctccagaggtctcaggtttgattccctctgtg-ccaatttcggtgggctaagtccatacagatcttgctctggcttt 151  Q
    ||||||||||| |||||||||||||||||||| |||||||||||   ||||||||||||||||||||||||||||| ||||||||||||||    
T  35171831 cttggagtttgctcctccagaggtctcaggttcgattccctctggcaccaatttcggtgggctaagtccatacagagcttgctctggcttt 35171921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 62; E-Value: 4e-27
Query Start/End: Original strand, 35 - 151
Target Start/End: Complemental strand, 4567630 - 4567513
Alignment:
Q  35 gggttggtctagtggttgacttgggatcttggagtttgttcctccagaggtctcaggtttgattccctctg-tgccaatttcggtgggctaagtccatac 133  Q
    ||||||| ||||| |||| |||||||||||| |||||| |||| |||| |||||||||| |||| |||||| |||||||||||||||||||| |||||||    
T  4567630 gggttggcctagtagttggcttgggatcttgaagtttgctccttcagaagtctcaggttcgatttcctctggtgccaatttcggtgggctaaatccatac 4567531  T
Q  134 agatcttgctctggcttt 151  Q
    ||| |||| |||||||||    
T  4567530 agagcttgttctggcttt 4567513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 48 - 151
Target Start/End: Complemental strand, 36242492 - 36242388
Alignment:
Q  48 ggttgacttgggatcttggagtttgttcctccagaggtctcaggtttgattccctct-gtgccaatttcggtgggctaagtccatacagatcttgctctg 146  Q
    ||||| |||||||||||| | |||| |||||||||||||||||||| |||||||||| ||| ||||||||||||||||||||||  |||| |||||||||    
T  36242492 ggttggcttgggatcttgaaatttgctcctccagaggtctcaggttcgattccctctggtgtcaatttcggtgggctaagtccagccagagcttgctctg 36242393  T
Q  147 gcttt 151  Q
    |||||    
T  36242392 gcttt 36242388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 48 - 151
Target Start/End: Original strand, 45271401 - 45271505
Alignment:
Q  48 ggttgacttgggatcttggagtttgttcctccagaggtctcaggtttgattccctctg-tgccaatttcggtgggctaagtccatacagatcttgctctg 146  Q
    ||||| ||||||||||| ||||||| | |||||||||| ||| ||| ||||||||||| |||||||||| |||||||||||||||||||| |||||||||    
T  45271401 ggttggcttgggatcttagagtttgcttctccagaggtttcatgttcgattccctctggtgccaatttcagtgggctaagtccatacagagcttgctctg 45271500  T
Q  147 gcttt 151  Q
    |||||    
T  45271501 gcttt 45271505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 60; E-Value: 6e-26
Query Start/End: Original strand, 26 - 151
Target Start/End: Complemental strand, 40997553 - 40997426
Alignment:
Q  26 tacccatttg-ggttggtctagtggttgacttgggatcttggagtttgttcctccagaggtctcaggtttgattccctct-gtgccaatttcggtgggct 123  Q
    |||||||||| ||| ||||||||||||||||||||||||||||||||| ||||||| |||||||| |||  |||||| || || |||||||||||| | |    
T  40997553 tacccatttgaggtgggtctagtggttgacttgggatcttggagtttgctcctccaaaggtctcatgttcaattccccctagtaccaatttcggtgagat 40997454  T
Q  124 aagtccatacagatcttgctctggcttt 151  Q
    ||||| ||||||| ||||||||| ||||    
T  40997453 aagtcaatacagagcttgctctgacttt 40997426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 59 - 151
Target Start/End: Original strand, 8258925 - 8259018
Alignment:
Q  59 gatcttggagtttgttcctccagaggtctcaggtttgattccctctg-tgccaatttcggtgggctaagtccatacagatcttgctctggcttt 151  Q
    |||||||||||||| ||||||||| |||||||||| |||||||||||  |||||||| |||||| ||||||||||||||||||| |||||||||    
T  8258925 gatcttggagtttgctcctccagatgtctcaggttcgattccctctgacgccaattttggtgggttaagtccatacagatcttgttctggcttt 8259018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 57; E-Value: 4e-24
Query Start/End: Original strand, 48 - 151
Target Start/End: Original strand, 5394034 - 5394138
Alignment:
Q  48 ggttgacttgggatcttggagtttgttcctccagaggtctcaggtttgattccctct-gtgccaatttcggtgggctaagtccatacagatcttgctctg 146  Q
    ||||| |||| |||||||||||||| ||||||| |||||||||||| |||||||||| ||| |||||||| |||||||||||||||||||  ||||||||    
T  5394034 ggttggcttgagatcttggagtttgctcctccaaaggtctcaggttcgattccctctggtgtcaatttcgatgggctaagtccatacagagtttgctctg 5394133  T
Q  147 gcttt 151  Q
     ||||    
T  5394134 acttt 5394138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 57; E-Value: 4e-24
Query Start/End: Original strand, 27 - 133
Target Start/End: Original strand, 32845086 - 32845194
Alignment:
Q  27 acccatttggg-ttggtctagtggttgacttgggatcttggagtttgttcctccagaggtctcaggtttgattccctct-gtgccaatttcggtgggcta 124  Q
    ||||||||||| |||| ||||| |||  ||||||||||||||||||| ||||||| | || ||||||| |||||||||| ||||||||||||||||||||    
T  32845086 acccatttggggttggcctagtagttagcttgggatcttggagtttgctcctccaaaagtttcaggttcgattccctctggtgccaatttcggtgggcta 32845185  T
Q  125 agtccatac 133  Q
    |||||||||    
T  32845186 agtccatac 32845194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 54; E-Value: 2e-22
Query Start/End: Original strand, 43 - 151
Target Start/End: Original strand, 19054037 - 19054146
Alignment:
Q  43 ctagtggttgacttgggatcttggagtttgttcctccagaggtctcaggtttgattccctct-gtgccaatttcggtgggctaagtccatacagatcttg 141  Q
    |||||| ||| |||| ||||||||||| || ||||||| ||||||||||||||||||| ||| |||  || |||||||||||||||||||||||| ||||    
T  19054037 ctagtgattggcttgagatcttggagtctgctcctccaaaggtctcaggtttgattccttctggtgttaacttcggtgggctaagtccatacagagcttg 19054136  T
Q  142 ctctggcttt 151  Q
    || |||||||    
T  19054137 ctttggcttt 19054146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 52; E-Value: 4e-21
Query Start/End: Original strand, 47 - 151
Target Start/End: Complemental strand, 34516589 - 34516489
Alignment:
Q  47 tggttgacttgggatcttggagtttgttcctccagaggtctcaggtttgattccctctgtgccaatttcggtgggctaagtccatacagatcttgctctg 146  Q
    |||||| ||||||||||||||||||| |||||||||||| ||||||| |||    || |||  ||||||||||||||||||||||||||| ||||||||     
T  34516589 tggttggcttgggatcttggagtttgctcctccagaggtttcaggttcgat----tcggtggtaatttcggtgggctaagtccatacagagcttgctctc 34516494  T
Q  147 gcttt 151  Q
    |||||    
T  34516493 gcttt 34516489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 52; E-Value: 4e-21
Query Start/End: Original strand, 27 - 151
Target Start/End: Complemental strand, 36390768 - 36390644
Alignment:
Q  27 acccatttggg-ttggtctagtggttgacttgggatcttggagtttgttcctccagaggtctcaggtttgattccctctg-tgccaatttcggtgggcta 124  Q
    ||||||||||| |||| ||||||||||  |||||||||  ||||||| | ||||| |||||||||||| |||| |||||| ||||||||||||||| |||    
T  36390768 acccatttggggttggcctagtggttggtttgggatct--gagtttgcttctccaaaggtctcaggttcgatttcctctggtgccaatttcggtggacta 36390671  T
Q  125 agtccatacagatcttgctctggcttt 151  Q
    |||||||||| | ||||||||| ||||    
T  36390670 agtccatacaaagcttgctctgacttt 36390644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 51; E-Value: 1e-20
Query Start/End: Original strand, 27 - 150
Target Start/End: Complemental strand, 8192553 - 8192428
Alignment:
Q  27 acccatttggg-ttggtctagtggttgacttgggatcttggagtttgttcctccagaggtctcaggtttgattccctct-gtgccaatttcggtgggcta 124  Q
    ||||||||||| |||| |||||||||| |||||||||||||||| || |||||   |||||||||||| |||||||||| |||||||| ||||||||| |    
T  8192553 acccatttggggttggcctagtggttggcttgggatcttggagtgtgctcctctcaaggtctcaggttcgattccctctggtgccaatgtcggtgggc-a 8192455  T
Q  125 agtccatacagatc-ttgctctggctt 150  Q
    |||||||| ||| | ||||||||||||    
T  8192454 agtccatatagagctttgctctggctt 8192428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 51; E-Value: 1e-20
Query Start/End: Original strand, 27 - 151
Target Start/End: Complemental strand, 27269552 - 27269420
Alignment:
Q  27 acccatttggg-ttggtctagtggttgacttgggatcttggagtttgttcctccagaggtctcaggtttgattccctct-------gtgccaatttcggt 118  Q
    ||||||||||| ||||  ||||||||| ||||||||||| ||||||| ||||| | |||| | ||||||||||||||||       ||| ||||||||||    
T  27269552 acccatttggggttggcatagtggttggcttgggatcttcgagtttgctcctctaaaggttttaggtttgattccctctggtgtcggtgtcaatttcggt 27269453  T
Q  119 gggctaagtccatacagatcttgctctggcttt 151  Q
    |||||||||||||| ||| ||||||||||||||    
T  27269452 gggctaagtccatatagaacttgctctggcttt 27269420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 50; E-Value: 6e-20
Query Start/End: Original strand, 35 - 151
Target Start/End: Original strand, 41329847 - 41329963
Alignment:
Q  35 gggttggtctagtggttgacttgggatcttggagtttgttcctccagaggtctcaggtttgattccctct-gtgccaatttcggtgggctaagtccatac 133  Q
    ||||||| |||||||||   |||||||||| ||||||| ||||||| |||| |||| || |||||||||| |||||||||| || ||||||||||||||     
T  41329847 gggttggcctagtggttagtttgggatcttagagtttgctcctccaaaggtttcagattcgattccctctggtgccaattttggcgggctaagtccata- 41329945  T
Q  134 agatcttgctctggcttt 151  Q
    ||| ||||||||||||||    
T  41329946 agagcttgctctggcttt 41329963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 49; E-Value: 2e-19
Query Start/End: Original strand, 48 - 151
Target Start/End: Original strand, 13266507 - 13266611
Alignment:
Q  48 ggttgacttgggatcttggagtttgttcctccagaggtctcaggtttgattccctctg-tgccaatttcggtgggctaagtccatacagatcttgctctg 146  Q
    ||||| |||| ||||||||| |||| ||||  |||||||||| ||| ||||| ||||| |||||||| |||||| ||||||||||||||| |||||||||    
T  13266507 ggttggcttgagatcttggaatttgctcctttagaggtctcatgttcgattcactctggtgccaattccggtggactaagtccatacagagcttgctctg 13266606  T
Q  147 gcttt 151  Q
    |||||    
T  13266607 gcttt 13266611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 48; E-Value: 9e-19
Query Start/End: Original strand, 27 - 128
Target Start/End: Complemental strand, 6714483 - 6714380
Alignment:
Q  27 acccatttggg-ttggtctagtggttgacttgggatcttggagtttgttcctccagaggtctcaggtttgattccctct-gtgccaatttcggtgggcta 124  Q
    ||||||||||| |||| ||| |||||| |||| |||||||||||||| ||||||||||||||||||||||||||| ||| |    |||||||||||||||    
T  6714483 acccatttgggattggcctaatggttggcttgagatcttggagtttgctcctccagaggtctcaggtttgattccatctagcattaatttcggtgggcta 6714384  T
Q  125 agtc 128  Q
    ||||    
T  6714383 agtc 6714380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 47; E-Value: 4e-18
Query Start/End: Original strand, 43 - 105
Target Start/End: Original strand, 4852570 - 4852632
Alignment:
Q  43 ctagtggttgacttgggatcttggagtttgttcctccagaggtctcaggtttgattccctctg 105  Q
    |||||||||||||||| ||||||||||||| ||||||| |||||||||||| |||||||||||    
T  4852570 ctagtggttgacttggaatcttggagtttgctcctccaaaggtctcaggttcgattccctctg 4852632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 47; E-Value: 4e-18
Query Start/End: Original strand, 82 - 151
Target Start/End: Complemental strand, 23787154 - 23787084
Alignment:
Q  82 aggtctcaggtttgattccctctg-tgccaatttcggtgggctaagtccatacagatcttgctctggcttt 151  Q
    |||||||||||||||||||||||| |||||||||||||||||||| ||||||||||  |||||||| ||||    
T  23787154 aggtctcaggtttgattccctctggtgccaatttcggtgggctaaatccatacagagtttgctctgacttt 23787084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 45; E-Value: 6e-17
Query Start/End: Original strand, 27 - 145
Target Start/End: Complemental strand, 19606046 - 19605927
Alignment:
Q  27 acccatttgggttggtctagtggttgacttgggatcttggagtttgttcctccagaggtctcaggtttgattccctct-gtgccaatttcggtgggctaa 125  Q
    |||||| |||||||  |||||||||| ||||||||||||||||  | |||||   |||||||||||| ||||||||||  ||| ||||||||||||| ||    
T  19606046 acccatctgggttgccctagtggttggcttgggatcttggagtgcgctcctctcaaggtctcaggttcgattccctctaatgctaatttcggtgggc-aa 19605948  T
Q  126 gtccatacaga-tcttgctct 145  Q
    ||||||||||| |||||||||    
T  19605947 gtccatacagagtcttgctct 19605927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 43; E-Value: 9e-16
Query Start/End: Original strand, 27 - 151
Target Start/End: Complemental strand, 5608236 - 5608110
Alignment:
Q  27 acccattt-gggttggtctagtggttgacttgggatcttggagtttgttcctccagaggtctcaggtttgattccctctg-tgccaatttcggtgggcta 124  Q
    |||||||| ||||||||||||  |||| ||||  |||||||| |||| |||| |||||||||||  || ||||| ||||| || |||||| |||||||||    
T  5608236 acccatttcgggttggtctagcagttggcttgaaatcttggaatttgctccttcagaggtctcatattcgattctctctggtgtcaattttggtgggcta 5608137  T
Q  125 agtccatacagatcttgctctggcttt 151  Q
    |||||||| ||| ||||||||| ||||    
T  5608136 agtccatatagagcttgctctgacttt 5608110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 39; E-Value: 0.0000000000002
Query Start/End: Original strand, 77 - 151
Target Start/End: Complemental strand, 2140634 - 2140563
Alignment:
Q  77 tccagaggtctcaggtttgattccctct-gtgccaatttcggtgggctaagtccatacagatcttgctctggcttt 151  Q
    ||||||||||||||||| |||||||||| ||| ||||||||||||    |||||||||||| ||||||||||||||    
T  2140634 tccagaggtctcaggttcgattccctctggtgtcaatttcggtgg----agtccatacagagcttgctctggcttt 2140563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 39; E-Value: 0.0000000000002
Query Start/End: Original strand, 105 - 151
Target Start/End: Original strand, 3943815 - 3943861
Alignment:
Q  105 gtgccaatttcggtgggctaagtccatacagatcttgctctggcttt 151  Q
    |||||||||||||| ||||||||||||||||| ||||||||||||||    
T  3943815 gtgccaatttcggttggctaagtccatacagagcttgctctggcttt 3943861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 38; E-Value: 0.0000000000008
Query Start/End: Original strand, 43 - 142
Target Start/End: Complemental strand, 918884 - 918782
Alignment:
Q  43 ctagtggttgacttgggatcttggagtttgttcctccagaggtctcaggtttg---attccctct-gtgccaatttcggtgggctaagtccatacagatc 138  Q
    |||||||||| |||||||| ||| |||||| |||||  ||||||||| ||| |   ||||||||| |||||||||||| ||||||||||||||||||| |    
T  918884 ctagtggttggcttgggattttgaagtttgctcctct-gaggtctcaagttcgtcgattccctcttgtgccaatttcgttgggctaagtccatacagagc 918786  T
Q  139 ttgc 142  Q
    ||||    
T  918785 ttgc 918782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 37; E-Value: 0.000000000003
Query Start/End: Original strand, 27 - 133
Target Start/End: Original strand, 14946774 - 14946882
Alignment:
Q  27 acccatttgg-gttggtctagtggttgacttgggatcttggagtttgttcctccagaggtctcaggtttgattccctct-gtgccaatttcggtgggcta 124  Q
    |||||||||| ||||| ||||||||||||||| ||||||| |||||| |||||   |||| | ||||| ||||  |||| ||| ||||||| ||||||||    
T  14946774 acccatttggagttggcctagtggttgacttgagatcttgaagtttgctcctctcaaggttttaggttcgattttctctggtgtcaatttcagtgggcta 14946873  T
Q  125 agtccatac 133  Q
    |||||||||    
T  14946874 agtccatac 14946882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 36; E-Value: 0.00000000001
Query Start/End: Original strand, 44 - 122
Target Start/End: Original strand, 18708490 - 18708569
Alignment:
Q  44 tagtggttgacttgggatcttggagtttgttcctccagaggtctcaggtttgattccctctg-tgccaatttcggtgggc 122  Q
    |||||||||| ||||||||||||||| ||||||||   |||||||||||| || |||||||| | |||||||| ||||||    
T  18708490 tagtggttgaattgggatcttggagtgtgttcctctcaaggtctcaggttcgactccctctgataccaatttcagtgggc 18708569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 36; E-Value: 0.00000000001
Query Start/End: Original strand, 45 - 151
Target Start/End: Original strand, 19849847 - 19849954
Alignment:
Q  45 agtggttgacttgggatcttggagtttgttcctccagaggtctcaggtttgattccctct-gtgccaatttcggtgggctaagtccatacagatcttgct 143  Q
    ||||||||  ||| |||||||||||||| ||||||| |||||| | ||| |||||| | | ||| |||||| | ||| ||||||| ||||||| ||||||    
T  19849847 agtggttggtttgagatcttggagtttgctcctccaaaggtcttaagttcgattccttttagtgtcaattttgatggactaagtctatacagagcttgct 19849946  T
Q  144 ctggcttt 151  Q
    ||||||||    
T  19849947 ctggcttt 19849954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 36; E-Value: 0.00000000001
Query Start/End: Original strand, 54 - 136
Target Start/End: Complemental strand, 28194307 - 28194225
Alignment:
Q  54 cttgggatcttggagtttgttcctccagaggtctcaggtttgattccctct-gtgccaatttcggtgggctaagtccatacaga 136  Q
    |||||||||||||||| || |||||   |||||| ||||| ||||| |||| |||||||||||||||||| |||||||||||||    
T  28194307 cttgggatcttggagtgtgctcctcttaaggtcttaggttcgattctctctggtgccaatttcggtgggc-aagtccatacaga 28194225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 35; E-Value: 0.00000000005
Query Start/End: Original strand, 105 - 151
Target Start/End: Original strand, 28668948 - 28668994
Alignment:
Q  105 gtgccaatttcggtgggctaagtccatacagatcttgctctggcttt 151  Q
    |||||||||||||||| ||||||||||||||| |||||| |||||||    
T  28668948 gtgccaatttcggtggactaagtccatacagagcttgctttggcttt 28668994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 33; E-Value: 0.0000000008
Query Start/End: Original strand, 49 - 151
Target Start/End: Complemental strand, 13747684 - 13747581
Alignment:
Q  49 gttgacttgggatcttggagtttgttcctccagaggtctcaggtttg-attccctctgtgccaatttcggtgggctaagtccatacagatc-ttgctctg 146  Q
    |||| ||||||| |||||||| || ||||||  |||||||||||||| || ||| | ||||| ||||||||||||| |||||||||||  | ||||||||    
T  13747684 gttggcttgggaccttggagtatgctcctcccaaggtctcaggtttgaatccccccggtgccgatttcggtgggct-agtccatacagtgctttgctctg 13747586  T
Q  147 gcttt 151  Q
    |||||    
T  13747585 gcttt 13747581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 33; E-Value: 0.0000000008
Query Start/End: Original strand, 55 - 130
Target Start/End: Original strand, 29361578 - 29361653
Alignment:
Q  55 ttgggatcttggagtttgttcctccagaggtctcaggtttgattccctctg-tgccaatttcggtgggctaagtcca 130  Q
    |||||||||||||||||| ||||||| || ||||||| | |||| |||||| || |||||||||||| |||||||||    
T  29361578 ttgggatcttggagtttgctcctccaaagatctcagg-tcgatttcctctgatgtcaatttcggtggactaagtcca 29361653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 33; E-Value: 0.0000000008
Query Start/End: Original strand, 27 - 102
Target Start/End: Complemental strand, 32526287 - 32526211
Alignment:
Q  27 acccatttgg-gttggtctagtggttgacttgggatcttggagtttgttcctccagaggtctcaggtttgattccct 102  Q
    |||||||||| |||||  |||||||||| ||||||||||| |||||| |||||   |||||||||||| ||||||||    
T  32526287 acccatttggagttggcttagtggttgatttgggatcttgaagtttgctcctctcaaggtctcaggttcgattccct 32526211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 32; E-Value: 0.000000003
Query Start/End: Original strand, 48 - 134
Target Start/End: Complemental strand, 19525576 - 19525490
Alignment:
Q  48 ggttgacttgggatcttggagtttgttcctccagaggtctcaggtttgattccctct-gtgccaatttcggtgggctaagtccataca 134  Q
    ||||| |||||||||||| ||| |||| |||   || ||||||||| |||||||||| |||||||||| ||||||| |||||||||||    
T  19525576 ggttggcttgggatcttgaagtgtgtttctctcaagatctcaggttcgattccctctggtgccaattttggtgggc-aagtccataca 19525490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 30; E-Value: 0.00000005
Query Start/End: Original strand, 48 - 136
Target Start/End: Original strand, 29698164 - 29698252
Alignment:
Q  48 ggttgacttgggatcttggagtttgttcctccagaggtctcaggtttgattccctct-gtgccaatttcggtgggctaagtccatacaga 136  Q
    ||||| |||||||||||||| |||| |||||   |||||||| |||| ||| ||||| ||| |||||||||||||| |||| ||||||||    
T  29698164 ggttggcttgggatcttggaatttgctcctctcaaggtctcaagttttatttcctctggtgtcaatttcggtgggc-aagttcatacaga 29698252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 29; E-Value: 0.0000002
Query Start/End: Original strand, 43 - 114
Target Start/End: Complemental strand, 3405337 - 3405265
Alignment:
Q  43 ctagtggttgacttgggatcttggagtttgttcctccagaggtctcaggtttgattccctct-gtgccaattt 114  Q
    ||||||||||||||||||||||||| | || || ||   ||||| |||||| |||||||||| ||||||||||    
T  3405337 ctagtggttgacttgggatcttggaatgtgctcatctcaaggtcacaggttcgattccctctggtgccaattt 3405265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 29; E-Value: 0.0000002
Query Start/End: Original strand, 27 - 114
Target Start/End: Complemental strand, 34041663 - 34041572
Alignment:
Q  27 acccatttgggttggtctagtggt--tgacttgggatcttggagtttgttcctccaga-ggtctcaggtttgattccctct-gtgccaattt 114  Q
    ||||| ||||||||| ||||||||  |||||| ||||||  |||| || ||||||  | |||||||||||||||||||||| ||||||||||    
T  34041663 acccacttgggttggcctagtggtattgacttaggatctgagagtgtgctcctcctcaaggtctcaggtttgattccctctggtgccaattt 34041572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 29; E-Value: 0.0000002
Query Start/End: Original strand, 49 - 136
Target Start/End: Original strand, 40591201 - 40591288
Alignment:
Q  49 gttgacttgggatcttggagtttgttcctccagaggtctcaggtttgattccctct-gtgccaatttcggtgggctaagtccatacaga 136  Q
    |||| |||| ||||||||||| || |||||   | ||||||||||||||| | ||| ||| |||||||||||||| |||||||||||||    
T  40591201 gttggcttgagatcttggagtgtgctcctctcaaagtctcaggtttgatttcttctggtggcaatttcggtgggc-aagtccatacaga 40591288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 28; E-Value: 0.0000008
Query Start/End: Original strand, 108 - 151
Target Start/End: Complemental strand, 714244 - 714201
Alignment:
Q  108 ccaatttcggtgggctaagtccatacagatcttgctctggcttt 151  Q
    ||||||||||||||||||||||||| |||  |||||||| ||||    
T  714244 ccaatttcggtgggctaagtccatagagagtttgctctgacttt 714201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 28; E-Value: 0.0000008
Query Start/End: Original strand, 27 - 69
Target Start/End: Complemental strand, 6007091 - 6007048
Alignment:
Q  27 acccatttgg-gttggtctagtggttgacttgggatcttggagt 69  Q
    |||||||||| |||||||| ||||||||||||| ||||||||||    
T  6007091 acccatttggagttggtctggtggttgacttggaatcttggagt 6007048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 28; E-Value: 0.0000008
Query Start/End: Original strand, 85 - 150
Target Start/End: Original strand, 19174817 - 19174883
Alignment:
Q  85 tctcaggtttgattccctctg-tgccaatttcggtgggctaagtccatacagatc-ttgctctggctt 150  Q
    ||||||||| |||||| |||| |||||||||||||||| || ||||||||||| | ||||||||||||    
T  19174817 tctcaggttcgattccttctggtgccaatttcggtggg-taggtccatacagagctttgctctggctt 19174883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 28; E-Value: 0.0000008
Query Start/End: Original strand, 82 - 136
Target Start/End: Original strand, 30943147 - 30943201
Alignment:
Q  82 aggtctcaggtttgattccctctg-tgccaatttcggtgggctaagtccatacaga 136  Q
    |||||||| ||||||||| ||||  |||||||||||||||||| ||||||||||||    
T  30943147 aggtctcaagtttgattctctcttatgccaatttcggtgggct-agtccatacaga 30943201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 91; Significance: 2e-44; HSPs: 63)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 91; E-Value: 2e-44
Query Start/End: Original strand, 27 - 151
Target Start/End: Complemental strand, 4621439 - 4621313
Alignment:
Q  27 acccatttggg-ttggtctagtggttgacttgggatcttggagtttgttcctccagaggtctcaggtttgattccctct-gtgccaatttcggtgggcta 124  Q
    ||||||||||| |||| |||||||||| ||||||||||||||||||| |||||||||||||||||||| |||||||||| ||||||||||||||||||||    
T  4621439 acccatttggggttggcctagtggttggcttgggatcttggagtttgctcctccagaggtctcaggttcgattccctctggtgccaatttcggtgggcta 4621340  T
Q  125 agtccatacagatcttgctctggcttt 151  Q
    |||||||||||| ||||||||||||||    
T  4621339 agtccatacagagcttgctctggcttt 4621313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 91; E-Value: 2e-44
Query Start/End: Original strand, 27 - 151
Target Start/End: Original strand, 24674388 - 24674514
Alignment:
Q  27 acccatttggg-ttggtctagtggttgacttgggatcttggagtttgttcctccagaggtctcaggtttgattccctct-gtgccaatttcggtgggcta 124  Q
    ||||||||||| |||| |||||||||| ||||||||||||||||||| |||||||||||||||||||| |||||||||| ||||||||||||||||||||    
T  24674388 acccatttggggttggcctagtggttggcttgggatcttggagtttgctcctccagaggtctcaggttcgattccctctggtgccaatttcggtgggcta 24674487  T
Q  125 agtccatacagatcttgctctggcttt 151  Q
    |||||||||||| ||||||||||||||    
T  24674488 agtccatacagagcttgctctggcttt 24674514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 87; E-Value: 5e-42
Query Start/End: Original strand, 27 - 151
Target Start/End: Original strand, 8077642 - 8077768
Alignment:
Q  27 acccatttggg-ttggtctagtggttgacttgggatcttggagtttgttcctccagaggtctcaggtttgattccctct-gtgccaatttcggtgggcta 124  Q
    ||||||||||| |||| |||||||||| ||||||||||||||||||| |||||||||||||||||||| ||||| |||| ||||||||||||||||||||    
T  8077642 acccatttggggttggcctagtggttggcttgggatcttggagtttgctcctccagaggtctcaggttcgattctctctggtgccaatttcggtgggcta 8077741  T
Q  125 agtccatacagatcttgctctggcttt 151  Q
    |||||||||||| ||||||||||||||    
T  8077742 agtccatacagagcttgctctggcttt 8077768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 87; E-Value: 5e-42
Query Start/End: Original strand, 27 - 151
Target Start/End: Complemental strand, 27455068 - 27454942
Alignment:
Q  27 acccatttggg-ttggtctagtggttgacttgggatcttggagtttgttcctccagaggtctcaggtttgattccctctg-tgccaatttcggtgggcta 124  Q
    ||||||||||| ||||||||||||||| ||||||||||||||||||| |||||||||||||||||||| ||||| ||||| |||||||||||||| ||||    
T  27455068 acccatttggggttggtctagtggttggcttgggatcttggagtttgctcctccagaggtctcaggttcgattcactctgatgccaatttcggtgagcta 27454969  T
Q  125 agtccatacagatcttgctctggcttt 151  Q
    |||||||||||| ||||||||||||||    
T  27454968 agtccatacagagcttgctctggcttt 27454942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 87; E-Value: 5e-42
Query Start/End: Original strand, 27 - 151
Target Start/End: Original strand, 46607805 - 46607931
Alignment:
Q  27 acccatttggg-ttggtctagtggttgacttgggatcttggagtttgttcctccagaggtctcaggtttgattccctct-gtgccaatttcggtgggcta 124  Q
    ||||||||||| |||| |||||||||||||||||||||||||||||| ||||||| |||||||||||| |||||||||| ||||||||||||||||||||    
T  46607805 acccatttggggttggcctagtggttgacttgggatcttggagtttgctcctccaaaggtctcaggttcgattccctctggtgccaatttcggtgggcta 46607904  T
Q  125 agtccatacagatcttgctctggcttt 151  Q
    |||||||||||| ||||||||| ||||    
T  46607905 agtccatacagagcttgctctgacttt 46607931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 83; E-Value: 1e-39
Query Start/End: Original strand, 27 - 151
Target Start/End: Complemental strand, 15059604 - 15059478
Alignment:
Q  27 acccatttggg-ttggtctagtggttgacttgggatcttggagtttgttcctccagaggtctcaggtttgattccctct-gtgccaatttcggtgggcta 124  Q
    ||||||||||| |||| |||||||||| ||||| ||||||||||||| |||||||||||||||||||| ||||| |||| ||||||||||||||||||||    
T  15059604 acccatttggggttggcctagtggttggcttggaatcttggagtttgctcctccagaggtctcaggttcgattctctctggtgccaatttcggtgggcta 15059505  T
Q  125 agtccatacagatcttgctctggcttt 151  Q
    |||||||||||| ||||||||||||||    
T  15059504 agtccatacagagcttgctctggcttt 15059478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 82; E-Value: 5e-39
Query Start/End: Original strand, 35 - 151
Target Start/End: Original strand, 24122027 - 24122144
Alignment:
Q  35 gggttggtctagtggttgacttgggatcttggagtttgttcctccagaggtctcaggtttgattccctct-gtgccaatttcggtgggctaagtccatac 133  Q
    |||||||  ||||||||| ||||||||||||| ||||| |||||||||||||||||||| |||||||||| |||||||||||||||||||||||||||||    
T  24122027 gggttggcttagtggttggcttgggatcttggggtttgctcctccagaggtctcaggttcgattccctctggtgccaatttcggtgggctaagtccatac 24122126  T
Q  134 agatcttgctctggcttt 151  Q
    ||| ||||||||||||||    
T  24122127 agagcttgctctggcttt 24122144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 81; E-Value: 2e-38
Query Start/End: Original strand, 44 - 151
Target Start/End: Original strand, 17935782 - 17935890
Alignment:
Q  44 tagtggttgacttgggatcttggagtttgttcctccagaggtctcaggtttgattccctct-gtgccaatttcggtgggctaagtccatacagatcttgc 142  Q
    ||||||||||||||||||||||||||||| |||||||||||||||||||| |||||| ||| ||||||||||||||||||||||||||||||||  ||||    
T  17935782 tagtggttgacttgggatcttggagtttgctcctccagaggtctcaggttcgattccttctagtgccaatttcggtgggctaagtccatacagagtttgc 17935881  T
Q  143 tctggcttt 151  Q
    |||||||||    
T  17935882 tctggcttt 17935890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 79; E-Value: 3e-37
Query Start/End: Original strand, 27 - 151
Target Start/End: Complemental strand, 7197448 - 7197323
Alignment:
Q  27 acccatttggg-ttggtctagtggttgacttgggatcttggagtttgttcctccagaggtctcaggtttgattccctctg-tgccaatttcggtgggcta 124  Q
    ||||||||||| |||| |||||||||| ||||||||||||||||||| |||||||||||||||||||| ||||||||||| |||||||||||||||| ||    
T  7197448 acccatttggggttggcctagtggttggcttgggatcttggagtttgctcctccagaggtctcaggttcgattccctctgatgccaatttcggtggg-ta 7197350  T
Q  125 agtccatacagatcttgctctggcttt 151  Q
    |||| ||||||| ||||||||||||||    
T  7197349 agtcaatacagaccttgctctggcttt 7197323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 78; E-Value: 1e-36
Query Start/End: Original strand, 43 - 151
Target Start/End: Original strand, 7578421 - 7578530
Alignment:
Q  43 ctagtggttgacttgggatcttggagtttgttcctccagaggtctcaggtttgattccctct-gtgccaatttcggtgggctaagtccatacagatcttg 141  Q
    |||||||||| |||||||||||||||||||||||||||||||||||||||| |||||||| | |||||||||||||||||||||||||||||| | ||||    
T  7578421 ctagtggttggcttgggatcttggagtttgttcctccagaggtctcaggttcgattccctatggtgccaatttcggtgggctaagtccatacaaagcttg 7578520  T
Q  142 ctctggcttt 151  Q
    ||||| ||||    
T  7578521 ctctgacttt 7578530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 78; E-Value: 1e-36
Query Start/End: Original strand, 35 - 151
Target Start/End: Complemental strand, 7766920 - 7766803
Alignment:
Q  35 gggttggtctagtggttgacttgggatcttggagtttgttcctccagaggtctcaggtttgattccctct-gtgccaatttcggtgggctaagtccatac 133  Q
    ||||||| |||||||||  ||||||||||||||||||| |||||||||||||||||||| |||||||||| |||| ||||||||||||||||||||||||    
T  7766920 gggttggcctagtggttagcttgggatcttggagtttgctcctccagaggtctcaggttcgattccctctggtgctaatttcggtgggctaagtccatac 7766821  T
Q  134 agatcttgctctggcttt 151  Q
    ||| ||||||||| ||||    
T  7766820 agagcttgctctgacttt 7766803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 75; E-Value: 7e-35
Query Start/End: Original strand, 27 - 151
Target Start/End: Original strand, 30677171 - 30677297
Alignment:
Q  27 acccatttggg-ttggtctagtggttgacttgggatcttggagtttgttcctccagaggtctcaggtttgattccctct-gtgccaatttcggtgggcta 124  Q
    ||||||||||| |||  ||||||||||  ||||||||| |||||||| ||||||| ||||||||||||||||||||||| ||||||||||||||||||||    
T  30677171 acccatttggggttgacctagtggttggtttgggatctaggagtttgctcctccaaaggtctcaggtttgattccctctggtgccaatttcggtgggcta 30677270  T
Q  125 agtccatacagatcttgctctggcttt 151  Q
    |||||||||||| |||||| |||||||    
T  30677271 agtccatacagagcttgctttggcttt 30677297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 71; E-Value: 2e-32
Query Start/End: Original strand, 54 - 151
Target Start/End: Complemental strand, 9500529 - 9500431
Alignment:
Q  54 cttgggatcttggagtttgttcctccagaggtctcaggtttgattccctctg-tgccaatttcggtgggctaagtccatacagatcttgctctggcttt 151  Q
    ||||||||||||||||||| |||| ||||||||||||||| ||||| ||||| ||||||||||||||||||||||||||||||| ||||||||||||||    
T  9500529 cttgggatcttggagtttgctccttcagaggtctcaggttcgattctctctggtgccaatttcggtgggctaagtccatacagagcttgctctggcttt 9500431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 70; E-Value: 7e-32
Query Start/End: Original strand, 35 - 151
Target Start/End: Original strand, 2272348 - 2272465
Alignment:
Q  35 gggttggtctagtggttgacttgggatcttggagtttgttcctccagaggtctcaggtttgattccctctg-tgccaatttcggtgggctaagtccatac 133  Q
    ||||||| |||||||||||||||||||||| ||||||| |||| ||||||||||||||||||||||||||| ||||||||||| |||||||||| |||||    
T  2272348 gggttggcctagtggttgacttgggatcttagagtttgctcctacagaggtctcaggtttgattccctctgatgccaatttcgctgggctaagttcatac 2272447  T
Q  134 agatcttgctctggcttt 151  Q
    | |  |||||||| ||||    
T  2272448 aaagtttgctctgacttt 2272465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 70; E-Value: 7e-32
Query Start/End: Original strand, 27 - 142
Target Start/End: Complemental strand, 23232467 - 23232350
Alignment:
Q  27 acccatttggg-ttggtctagtggttgacttgggatcttggagtttgttcctccagaggtctcaggtttgattccctct-gtgccaatttcggtgggcta 124  Q
    ||||||||||| |||| ||||||||||||||||||||||| |||||| || ||||||||| ||||||| |||||||||| | ||||||||||||||||||    
T  23232467 acccatttgggattggcctagtggttgacttgggatcttgaagtttgctcttccagaggtttcaggttcgattccctctggcgccaatttcggtgggcta 23232368  T
Q  125 agtccatacagatcttgc 142  Q
    |||||||||||| |||||    
T  23232367 agtccatacagagcttgc 23232350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 69; E-Value: 3e-31
Query Start/End: Original strand, 44 - 151
Target Start/End: Original strand, 1378911 - 1379019
Alignment:
Q  44 tagtggttgacttgggatcttggagtttgttcctccagaggtctcaggtttgattccctctg-tgccaatttcggtgggctaagtccatacagatcttgc 142  Q
    ||||||||||||||||||||||||||||| ||||||| | |||||| ||| |||| |||||| || |||||||||||||||||||||||||||| |||||    
T  1378911 tagtggttgacttgggatcttggagtttgctcctccaaaagtctcatgttcgatttcctctggtgtcaatttcggtgggctaagtccatacagaacttgc 1379010  T
Q  143 tctggcttt 151  Q
    |||||||||    
T  1379011 tctggcttt 1379019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 69; E-Value: 3e-31
Query Start/End: Original strand, 35 - 134
Target Start/End: Complemental strand, 46113595 - 46113495
Alignment:
Q  35 gggttggtctagtggttgacttgggatcttggagtttgttcctccagaggtctcaggtttgattccctct-gtgccaatttcggtgggctaagtccatac 133  Q
    ||||||| ||||||||||  |||||||||||||||||| |||||||||||||||||||| |||||||||| || ||||||||||||||||||||||||||    
T  46113595 gggttggcctagtggttggtttgggatcttggagtttgctcctccagaggtctcaggttcgattccctctggtaccaatttcggtgggctaagtccatac 46113496  T
Q  134 a 134  Q
    |    
T  46113495 a 46113495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 68; E-Value: 1e-30
Query Start/End: Original strand, 27 - 136
Target Start/End: Original strand, 23734111 - 23734222
Alignment:
Q  27 acccatttggg-ttggtctagtggttgacttgggatcttggagtttgttcctccagaggtctcaggtttgattccctctg-tgccaatttcggtgggcta 124  Q
    ||||||||||| ||||| |||| |||| ||||||||||| || |||| |||||||||||||||||||| ||||||||||| |||||||||||||||||||    
T  23734111 acccatttggggttggtttagtagttggcttgggatcttagaatttgctcctccagaggtctcaggttcgattccctctgatgccaatttcggtgggcta 23734210  T
Q  125 agtccatacaga 136  Q
    ||||||||||||    
T  23734211 agtccatacaga 23734222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 68; E-Value: 1e-30
Query Start/End: Original strand, 27 - 136
Target Start/End: Original strand, 23741303 - 23741414
Alignment:
Q  27 acccatttggg-ttggtctagtggttgacttgggatcttggagtttgttcctccagaggtctcaggtttgattccctctg-tgccaatttcggtgggcta 124  Q
    ||||||||||| ||||| |||| |||| ||||||||||| || |||| |||||||||||||||||||| ||||||||||| |||||||||||||||||||    
T  23741303 acccatttggggttggtttagtagttggcttgggatcttagaatttgctcctccagaggtctcaggttcgattccctctgatgccaatttcggtgggcta 23741402  T
Q  125 agtccatacaga 136  Q
    ||||||||||||    
T  23741403 agtccatacaga 23741414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 67; E-Value: 4e-30
Query Start/End: Original strand, 46 - 147
Target Start/End: Complemental strand, 37351643 - 37351541
Alignment:
Q  46 gtggttgacttgggatcttggagtttgttcctccagaggtctcaggtttgattccctctg-tgccaatttcggtgggctaagtccatacagatcttgctc 144  Q
    ||||||| ||||||||||||||||||| ||||||| | |||||||||| |||||| |||| ||||||||||||||||||||||||||||||| |||||||    
T  37351643 gtggttggcttgggatcttggagtttgctcctccaaatgtctcaggttcgattccttctgatgccaatttcggtgggctaagtccatacagagcttgctc 37351544  T
Q  145 tgg 147  Q
    |||    
T  37351543 tgg 37351541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 66; E-Value: 2e-29
Query Start/End: Original strand, 43 - 151
Target Start/End: Original strand, 7946856 - 7946965
Alignment:
Q  43 ctagtggttgacttgggatcttggagtttgttcctccagaggtctcaggtttgattccctct-gtgccaatttcggtgggctaagtccatacagatcttg 141  Q
    |||||||||| |||| ||||||| |||||| |||||||||||||||| ||| |||||||||| |||||||||||||||||||||||| ||||||| ||||    
T  7946856 ctagtggttggcttgagatcttgaagtttgctcctccagaggtctcaagttcgattccctctggtgccaatttcggtgggctaagtctatacagagcttg 7946955  T
Q  142 ctctggcttt 151  Q
    |||| |||||    
T  7946956 ctctcgcttt 7946965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 64; E-Value: 3e-28
Query Start/End: Original strand, 49 - 151
Target Start/End: Complemental strand, 45859222 - 45859119
Alignment:
Q  49 gttgacttgggatcttggagtttgttcctccagaggtctcaggtttgattccctct-gtgccaatttcggtgggctaagtccatacagatcttgctctgg 147  Q
    |||| ||||||||||||||||||| ||||| |||||||||||||| |||||||||| ||||||||||||||||||||||||||||||   |||||||| |    
T  45859222 gttggcttgggatcttggagtttgctcctctagaggtctcaggttcgattccctctggtgccaatttcggtgggctaagtccatacatcgcttgctcttg 45859123  T
Q  148 cttt 151  Q
    ||||    
T  45859122 cttt 45859119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 63; E-Value: 1e-27
Query Start/End: Original strand, 27 - 151
Target Start/End: Original strand, 168196 - 168322
Alignment:
Q  27 acccatttgg-gttggtctagtggttgacttgggatcttggagtttgttcctccagaggtctcaggtttgattccctct-gtgccaatttcggtgggcta 124  Q
    |||||||||| ||||| |||||||||| ||||||||||| ||||||| || | || |||||||||||| |||||||||| ||||||||||||||||||||    
T  168196 acccatttggagttggcctagtggttggcttgggatcttagagtttgctctttcaaaggtctcaggttcgattccctctggtgccaatttcggtgggcta 168295  T
Q  125 agtccatacagatcttgctctggcttt 151  Q
    ||| |||||||| |||| |||| ||||    
T  168296 agttcatacagagcttgttctgacttt 168322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 48 - 151
Target Start/End: Complemental strand, 33905690 - 33905586
Alignment:
Q  48 ggttgacttgggatcttggagtttgttcctccagaggtctcaggtttgattccctct-gtgccaatttcggtgggctaagtccatacagatcttgctctg 146  Q
    ||||| ||||||||||||||||||| |||||||||||||||||||| |||||||||| ||  ||||||||||||| ||||||||||||||  ||| ||||    
T  33905690 ggttggcttgggatcttggagtttgctcctccagaggtctcaggttcgattccctctggtatcaatttcggtgggttaagtccatacagagtttgttctg 33905591  T
Q  147 gcttt 151  Q
    |||||    
T  33905590 gcttt 33905586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 27 - 121
Target Start/End: Original strand, 34778337 - 34778433
Alignment:
Q  27 acccatttggg-ttggtctagtggttgacttgggatcttggagtttgttcctccagaggtctcaggtttgattccctct-gtgccaatttcggtggg 121  Q
    ||||||||||| |||| |||||||||| ||||||||||||||||||| ||||||||||||||||||||||||||||||| || ||||||| ||||||    
T  34778337 acccatttggggttggcctagtggttggcttgggatcttggagtttgctcctccagaggtctcaggtttgattccctctggtaccaattttggtggg 34778433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 59; E-Value: 2e-25
Query Start/End: Original strand, 27 - 151
Target Start/End: Original strand, 32729540 - 32729665
Alignment:
Q  27 acccatttggg-ttggtctagtggttgacttgggatcttggagtttgttcctccagaggtctcaggtttgattccctct-gtgccaatttcggtgggcta 124  Q
    ||||||||||| |||| |||||||||| ||||||||||| ||||||| |||||   | |||||||||| |||||||| | |||||||||||||||||| |    
T  32729540 acccatttggggttggcctagtggttggcttgggatcttcgagtttgctcctctcaaagtctcaggttcgattccctatggtgccaatttcggtgggc-a 32729638  T
Q  125 agtccatacagatcttgctctggcttt 151  Q
    |||||||||||| ||||||||||||||    
T  32729639 agtccatacagagcttgctctggcttt 32729665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 43 - 151
Target Start/End: Original strand, 18646865 - 18646974
Alignment:
Q  43 ctagtggttgacttgggatcttggagtttgttcctccagaggtctcaggtttgattccctct-gtgccaatttcggtgggctaagtccatacagatcttg 141  Q
    |||||||||| |||| |||||| ||||||| | |||||||||||||||||| ||||| |||| |||||||||||||||||||||||| ||||| |  |||    
T  18646865 ctagtggttggcttgtgatctttgagtttgcttctccagaggtctcaggttcgattctctctggtgccaatttcggtgggctaagtctatacaaagtttg 18646964  T
Q  142 ctctggcttt 151  Q
    ||||||||||    
T  18646965 ctctggcttt 18646974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 55 - 143
Target Start/End: Complemental strand, 36156061 - 36155972
Alignment:
Q  55 ttgggatcttggagtttgttcctccagaggtctcaggtttgattccctct-gtgccaatttcggtgggctaagtccatacagatcttgct 143  Q
    |||||||||||||||||| |||||||||||| ||||||| |||||||||| |||||||||||||||||| |||||||| |||| ||||||    
T  36156061 ttgggatcttggagtttgctcctccagaggtgtcaggttcgattccctctggtgccaatttcggtgggccaagtccatgcagagcttgct 36155972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 27 - 120
Target Start/End: Complemental strand, 20487392 - 20487297
Alignment:
Q  27 acccatttggg-ttggtctagtggttgacttgggatcttggagtttgttcctccagaggtctcaggtttgattccctct-gtgccaatttcggtgg 120  Q
    ||||||||||| ||||| ||||||||| || |||||||||||||||| |||||||||||||||| ||| |||||||||| ||||||||||||||||    
T  20487392 acccatttggggttggtttagtggttggctcgggatcttggagtttgctcctccagaggtctcaagttcgattccctctggtgccaatttcggtgg 20487297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 27 - 152
Target Start/End: Complemental strand, 29057539 - 29057413
Alignment:
Q  27 acccatttggg-ttggtctagtggttgacttgggatcttggagtttgttcctccagaggtctcaggtttgattccctc-tgtgccaatttcggtgggcta 124  Q
    ||||||||||| |||| ||||||||||  |||||||||||||||||| | ||||| |||||||||||| ||||||||| ||||||||||||| | ||  |    
T  29057539 acccatttggggttggcctagtggttggtttgggatcttggagtttgctgctccaaaggtctcaggttcgattccctcttgtgccaatttcgat-ggtaa 29057441  T
Q  125 agtccatacagatcttgctctggctttc 152  Q
    |||| ||||||| |||||||||||||||    
T  29057440 agtctatacagagcttgctctggctttc 29057413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 55; E-Value: 6e-23
Query Start/End: Original strand, 27 - 151
Target Start/End: Original strand, 21726724 - 21726850
Alignment:
Q  27 acccatttg-ggttggtctagtggttgacttgggatcttggagtttgttcctccagaggtctcaggtttgattccctct-gtgccaatttcggtgggcta 124  Q
    ||||||||| |||||  ||||||||||| ||||| ||||| |||||| |||||||||||||||||||| |||||||| | |||||||||||| |||| ||    
T  21726724 acccatttgaggttgacctagtggttgatttgggttcttgaagtttgctcctccagaggtctcaggttcgattccctttggtgccaatttcgatgggtta 21726823  T
Q  125 agtccatacagatcttgctctggcttt 151  Q
    |||||||| ||| |||| ||| |||||    
T  21726824 agtccatatagagcttgttctagcttt 21726850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 53; E-Value: 9e-22
Query Start/End: Original strand, 44 - 151
Target Start/End: Complemental strand, 8779920 - 8779812
Alignment:
Q  44 tagtggttgacttgggatcttggagtttgttcctccagaggtctcaggtttgattccctct-gtgccaatttcggtgggctaagtccatacagatcttgc 142  Q
    |||||||||| |||||||||||||||||| | ||||||||||||||| || |||| | ||| ||| |||||||||||||||||||||||||| | ||| |    
T  8779920 tagtggttgatttgggatcttggagtttgcttctccagaggtctcagcttcgatttcttctagtgtcaatttcggtgggctaagtccatacacagcttac 8779821  T
Q  143 tctggcttt 151  Q
    ||| |||||    
T  8779820 tctagcttt 8779812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 53; E-Value: 9e-22
Query Start/End: Original strand, 44 - 151
Target Start/End: Complemental strand, 18533908 - 18533800
Alignment:
Q  44 tagtggttgacttgggatcttggagtttgttcctccagaggtctcaggtttgattccctct-gtgccaatttcggtgggctaagtccatacagatcttgc 142  Q
    |||||||||||||| |||||| ||||||| |||||||||||| |||| |||||||| |||| |||||||||||| ||| ||||||||||| ||| ||||     
T  18533908 tagtggttgacttgagatcttagagtttgctcctccagaggtatcagatttgattctctctagtgccaatttcgatggactaagtccatatagagcttgt 18533809  T
Q  143 tctggcttt 151  Q
    |||| ||||    
T  18533808 tctgacttt 18533800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 52; E-Value: 4e-21
Query Start/End: Original strand, 27 - 105
Target Start/End: Complemental strand, 14258629 - 14258550
Alignment:
Q  27 acccatttggg-ttggtctagtggttgacttgggatcttggagtttgttcctccagaggtctcaggtttgattccctctg 105  Q
    ||||||||||| |||| |||||||||| ||||||||||||||||||||||||||||| ||||| |||| |||||||||||    
T  14258629 acccatttgggcttggcctagtggttggcttgggatcttggagtttgttcctccagatgtctctggttcgattccctctg 14258550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 50; E-Value: 6e-20
Query Start/End: Original strand, 43 - 151
Target Start/End: Original strand, 32930761 - 32930870
Alignment:
Q  43 ctagtggttgacttgggatcttggagtttgttcctccagaggtctcaggtttgattccctctg-tgccaatttcggtgggctaagtccatacagatcttg 141  Q
    ||||||||||  |||| ||||||||||||  |||| ||||||||||| ||| |||| |||||| |||| |||| |||||||||||||||| |||| ||||    
T  32930761 ctagtggttggtttggaatcttggagtttactccttcagaggtctcaagttcgatttcctctggtgcccattttggtgggctaagtccatgcagagcttg 32930860  T
Q  142 ctctggcttt 151  Q
    ||||||||||    
T  32930861 ctctggcttt 32930870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 45; E-Value: 6e-17
Query Start/End: Original strand, 45 - 136
Target Start/End: Complemental strand, 19034569 - 19034478
Alignment:
Q  45 agtggttgacttgggatcttggagtttgttcctccagaggtctcaggtttgattccctct-gtgccaatttcggtgggctaagtccatacaga 136  Q
    ||||||||  |||||||||||||||||||||||| | |||| ||||||| ||||  |||| |||||||||||||||||| |||||||||||||    
T  19034569 agtggttggtttgggatcttggagtttgttcctcaaaaggtttcaggttcgattatctctggtgccaatttcggtgggc-aagtccatacaga 19034478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 43; E-Value: 9e-16
Query Start/End: Original strand, 55 - 136
Target Start/End: Complemental strand, 25237162 - 25237081
Alignment:
Q  55 ttgggatcttggagtttgttcctccagaggtctcaggtttgattccctct-gtgccaatttcggtgggctaagtccatacaga 136  Q
    |||||||||||||||||| | |||   |||||||||||| |||||||||| |||||||||||||||||| |||||||||||||    
T  25237162 ttgggatcttggagtttgcttctctcaaggtctcaggttcgattccctctagtgccaatttcggtgggc-aagtccatacaga 25237081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 42; E-Value: 0.000000000000003
Query Start/End: Original strand, 79 - 151
Target Start/End: Complemental strand, 8254901 - 8254828
Alignment:
Q  79 cagaggtctcaggtttgattccctctg-tgccaatttcggtgggctaagtccatacagatcttgctctggcttt 151  Q
    ||||||||||||||| ||||  ||||| || ||||||||||||||||||| |||||||| ||||||||||||||    
T  8254901 cagaggtctcaggttcgattatctctggtgtcaatttcggtgggctaagttcatacagaacttgctctggcttt 8254828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 42; E-Value: 0.000000000000003
Query Start/End: Original strand, 27 - 134
Target Start/End: Original strand, 24216973 - 24217081
Alignment:
Q  27 acccatttggg-ttggtctagtggttgacttgggatcttggagtttgttcctccagaggtctcaggtttgattccctct-gtgccaatttcggtgggcta 124  Q
    ||||||||||| |||  ||||||||||||||||||||||||||| || |||||   |||||||||||| |||| ||| | ||||||||||||||||| ||    
T  24216973 acccatttggggttgacctagtggttgacttgggatcttggagtgtgctcctctcaaggtctcaggttcgattacctttggtgccaatttcggtggg-ta 24217071  T
Q  125 agtccataca 134  Q
    | ||||||||    
T  24217072 aatccataca 24217081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 41; E-Value: 0.00000000000001
Query Start/End: Original strand, 35 - 118
Target Start/End: Original strand, 1378749 - 1378833
Alignment:
Q  35 gggttggtctagtggttgacttgggatcttggagtttgttcctccagaggtctcaggtttgattccctct-gtgccaatttcggt 118  Q
    |||||||||||||||||||||||| ||||||||||||  ||||||| |||||||| ||| ||||  |||| ||| ||||||||||    
T  1378749 gggttggtctagtggttgacttggaatcttggagtttactcctccaaaggtctcatgttcgattttctctggtgtcaatttcggt 1378833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 41; E-Value: 0.00000000000001
Query Start/End: Original strand, 35 - 122
Target Start/End: Original strand, 52135134 - 52135222
Alignment:
Q  35 gggttggtctagtggttgacttgggatcttggagtttgttcctccagaggtctcaggtttgattccctct-gtgccaatttcggtgggc 122  Q
    |||||||||||||||||||||||||||||||||||||| || ||   | |||||||||| ||||  |||| ||||||||| ||||||||    
T  52135134 gggttggtctagtggttgacttgggatcttggagtttgctcatctcaatgtctcaggttcgattatctctagtgccaattccggtgggc 52135222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 38; E-Value: 0.0000000000008
Query Start/End: Original strand, 31 - 136
Target Start/End: Original strand, 39964510 - 39964618
Alignment:
Q  31 atttgggttggtctagtggt--tgacttgggatcttggagtttgttcctccagaggtctcaggtttgattccctct-gtgccaatttcggtgggctaagt 127  Q
    ||||||||||| |||| |||  || |||| || |||||||| || |||||   ||||||||||||||||||||||| ||||||||||||||||||| |||    
T  39964510 atttgggttggcctagaggtgttggcttgcgaccttggagtgtgctcctctcaaggtctcaggtttgattccctctggtgccaatttcggtgggctgagt 39964609  T
Q  128 ccatacaga 136  Q
     || |||||    
T  39964610 tcacacaga 39964618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 38; E-Value: 0.0000000000008
Query Start/End: Original strand, 43 - 151
Target Start/End: Complemental strand, 40146066 - 40145962
Alignment:
Q  43 ctagtggttgacttgggatcttggagtttgttcctccagaggtctcaggtttgattccctct-gtgccaatttcggtgggctaagtccatacagatcttg 141  Q
    ||||||||||| ||| ||||||| |||||| |||| |||     ||||||| |||| ||||| ||||||||||  |||||||||||||||||||| ||||    
T  40146066 ctagtggttgatttgtgatcttgaagtttgctccttcag-----tcaggttcgatttcctctagtgccaatttatgtgggctaagtccatacagagcttg 40145972  T
Q  142 ctctggcttt 151  Q
    ||||| ||||    
T  40145971 ctctgacttt 40145962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 37; E-Value: 0.000000000003
Query Start/End: Original strand, 35 - 134
Target Start/End: Original strand, 809226 - 809325
Alignment:
Q  35 gggttggtctagtggttgacttgggatcttggagtttgttcctccagaggtctcaggtttgattccctct-gtgccaatttcggtgggctaagtccatac 133  Q
    ||||||| || |||||||  |||||||||||||||||  |||||   ||||||||||||||||| || || ||| |||||||||||||| ||||||||||    
T  809226 gggttggcctcgtggttggtttgggatcttggagtttactcctcttaaggtctcaggtttgattacccctagtgtcaatttcggtgggc-aagtccatac 809324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 36; E-Value: 0.00000000001
Query Start/End: Original strand, 82 - 136
Target Start/End: Original strand, 16539659 - 16539713
Alignment:
Q  82 aggtctcaggtttgattccctct-gtgccaatttcggtgggctaagtccatacaga 136  Q
    ||||||||||||||||||||||| |||||||||| ||||||| |||||||||||||    
T  16539659 aggtctcaggtttgattccctctggtgccaattttggtgggc-aagtccatacaga 16539713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 35; E-Value: 0.00000000005
Query Start/End: Original strand, 27 - 77
Target Start/End: Original strand, 6776140 - 6776190
Alignment:
Q  27 acccatttgggttggtctagtggttgacttgggatcttggagtttgttcct 77  Q
    ||||||||||||||| ||||||||||  |||||||||||||||||| ||||    
T  6776140 acccatttgggttggcctagtggttggtttgggatcttggagtttgctcct 6776190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 35; E-Value: 0.00000000005
Query Start/End: Original strand, 109 - 151
Target Start/End: Complemental strand, 45331740 - 45331698
Alignment:
Q  109 caatttcggtgggctaagtccatacagatcttgctctggcttt 151  Q
    |||||||||||||||||||||||||||| |||||| |||||||    
T  45331740 caatttcggtgggctaagtccatacagagcttgctttggcttt 45331698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 34; E-Value: 0.0000000002
Query Start/End: Original strand, 27 - 151
Target Start/End: Original strand, 19480528 - 19480656
Alignment:
Q  27 acccatttgggttggtctagtggt--tgacttgggatcttggagtttgttcctccagaggtctcaggtttgatt-ccctctgtgccaatttcggtgggct 123  Q
    ||||||||||||||| ||  ||||  ||||||||||||||||||| || |||||   ||||||||  || |||| ||| | ||||||||||  |||||||    
T  19480528 acccatttgggttggccttatggtgttgacttgggatcttggagtgtgctcctctcaaggtctcacattcgattccccgcggtgccaattttagtgggct 19480627  T
Q  124 aagtccatacagatct-tgctctggcttt 151  Q
    ||||||||| ||| || ||||||||||||    
T  19480628 aagtccatatagagctatgctctggcttt 19480656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 34; E-Value: 0.0000000002
Query Start/End: Original strand, 27 - 136
Target Start/End: Original strand, 37046986 - 37047097
Alignment:
Q  27 acccatttgggttggtctagtggt--tgacttgggatcttggagtttgttcctccagaggtctcaggtttgattccctct-gtgccaatttcggtgggct 123  Q
    ||||| |||||||||||| |||||  || ||||||| |||||||| || |||||   |||||||||||||||||||| || || | ||||| ||||||||    
T  37046986 acccacttgggttggtctggtggtgttggcttgggaccttggagtgtgctcctctcaaggtctcaggtttgattccccctggtacaaattttggtgggct 37047085  T
Q  124 aagtccatacaga 136  Q
     ||||||||||||    
T  37047086 -agtccatacaga 37047097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 34; E-Value: 0.0000000002
Query Start/End: Original strand, 27 - 124
Target Start/End: Complemental strand, 39714853 - 39714753
Alignment:
Q  27 acccatttgggttggtctagtgg--ttgacttgggatcttggagtttgttcctccagaggtctcaggtttgattc-cctctgtgccaatttcggtgggct 123  Q
    ||||| |||||||||  ||||||  ||| |||||||||||||||| || |||||   |||||||| ||||||||| |||| ||||| |||||||||||||    
T  39714853 acccacttgggttggcatagtggcgttggcttgggatcttggagtgtgctcctctcaaggtctcaagtttgattctcctcggtgccgatttcggtgggct 39714754  T
Q  124 a 124  Q
    |    
T  39714753 a 39714753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 34; E-Value: 0.0000000002
Query Start/End: Original strand, 27 - 125
Target Start/End: Complemental strand, 44417536 - 44417436
Alignment:
Q  27 acccatttgggttggtctagtggt--tgacttgggatcttggagtttgttcctccagaggtctcaggtttgattccctctgtgccaatttcggtgggcta 124  Q
    |||||||||| |||||||| ||||  || ||||||| |||||||| || | |||   |||||||||||||||||||| | ||||||||||| || |||||    
T  44417536 acccatttggtttggtctaatggtgctggcttgggaccttggagtgtgctgctctcaaggtctcaggtttgattcccccggtgccaatttcagtaggcta 44417437  T
Q  125 a 125  Q
    |    
T  44417436 a 44417436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 33; E-Value: 0.0000000008
Query Start/End: Original strand, 27 - 136
Target Start/End: Original strand, 1486415 - 1486523
Alignment:
Q  27 acccatttggg-ttggtctagtggttgacttgggatcttggagtttgttcctccagaggtctcaggtttgattccctct-gtgccaatttcggtgggcta 124  Q
    ||||||||||| |||  |||||||||| ||||||||||||||||  | | |||   |||||||||||| |||||||| | |||||||||||| |||| ||    
T  1486415 acccatttggggttgacctagtggttggcttgggatcttggagt--gctactctcaaggtctcaggttcgattccctttggtgccaatttcgatggg-ta 1486511  T
Q  125 agtccatacaga 136  Q
    ||||||||||||    
T  1486512 agtccatacaga 1486523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 33; E-Value: 0.0000000008
Query Start/End: Original strand, 35 - 103
Target Start/End: Original strand, 1818738 - 1818806
Alignment:
Q  35 gggttggtctagtggttgacttgggatcttggagtttgttcctccagaggtctcaggtttgattccctc 103  Q
    ||||||| || || |||| ||| ||||||||||||||| || ||||||||| ||||||| |||||||||    
T  1818738 gggttggcctggtagttggcttaggatcttggagtttgctcttccagaggtttcaggttcgattccctc 1818806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 32; E-Value: 0.000000003
Query Start/End: Original strand, 27 - 136
Target Start/End: Original strand, 1138574 - 1138684
Alignment:
Q  27 acccatttggg-ttggtctagtggttgacttgggatcttggagtttgttcctccagaggtctcaggtttgattccctct-gtgccaatttcggtgggcta 124  Q
    ||||||||||| |||  |||||||||| |||| ||||||||||| || |||||   |||||| ||||| || || |||| |||||||||||||||| | |    
T  1138574 acccatttggggttgacctagtggttggcttgagatcttggagtgtgctcctctcaaggtcttaggttcgaatctctctagtgccaatttcggtggac-a 1138672  T
Q  125 agtccatacaga 136  Q
    ||||||||||||    
T  1138673 agtccatacaga 1138684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 32; E-Value: 0.000000003
Query Start/End: Original strand, 37 - 119
Target Start/End: Complemental strand, 25496679 - 25496596
Alignment:
Q  37 gttggtctagtggttgacttgggatcttggagtttgttcctccagaggtctcaggtttgattccctct-gtgccaatttcggtg 119  Q
    ||||| |||||| ||| ||||||||||||||| ||| |||||   |||||||| ||| |||||||||| ||||| |||||||||    
T  25496679 gttggcctagtgattggcttgggatcttggagattgctcctcttaaggtctcaagttcgattccctctagtgcctatttcggtg 25496596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 31; E-Value: 0.00000001
Query Start/End: Original strand, 35 - 69
Target Start/End: Complemental strand, 1095188 - 1095154
Alignment:
Q  35 gggttggtctagtggttgacttgggatcttggagt 69  Q
    |||||||||||||||||| ||||||||||||||||    
T  1095188 gggttggtctagtggttggcttgggatcttggagt 1095154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 31; E-Value: 0.00000001
Query Start/End: Original strand, 43 - 136
Target Start/End: Original strand, 10059067 - 10059160
Alignment:
Q  43 ctagtggttgacttgggatcttggagtttgttcctccagaggtctcaggtttgattccctct-gtgccaatttcggtgggctaagtccatacaga 136  Q
    ||||||||||||||| |||||||||||||| |||||   | ||||||||||| |||| ||||  || |||||||| ||||| |||| ||||||||    
T  10059067 ctagtggttgacttgagatcttggagtttgctcctctcaaagtctcaggtttaattctctctaatgtcaatttcgatgggc-aagttcatacaga 10059160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 31; E-Value: 0.00000001
Query Start/End: Original strand, 30 - 104
Target Start/End: Complemental strand, 36921695 - 36921621
Alignment:
Q  30 catttgggttggtctagtggttgacttgggatcttggagtttgttcctccagaggtctcaggtttgattccctct 104  Q
    |||||||||||||| |  |||| ||||||||||||| | ||||||||||   |||||| ||||| ||||||||||    
T  36921695 catttgggttggtccaccggttaacttgggatcttgaaatttgttcctctcaaggtcttaggttcgattccctct 36921621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 30; E-Value: 0.00000005
Query Start/End: Original strand, 82 - 130
Target Start/End: Original strand, 2537749 - 2537798
Alignment:
Q  82 aggtctcaggtttgattccctctg-tgccaatttcggtgggctaagtcca 130  Q
    ||||||||||||||||||| | || ||||||||||||||||||| |||||    
T  2537749 aggtctcaggtttgattccatttggtgccaatttcggtgggctatgtcca 2537798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 30; E-Value: 0.00000005
Query Start/End: Original strand, 27 - 124
Target Start/End: Original strand, 39012292 - 39012392
Alignment:
Q  27 acccatttgggttggtctagtggt--tgacttgggatcttggagtttgttcctccagaggtctcaggtttgattccc-tctgtgccaatttcggtgggct 123  Q
    ||||| || |||||| ||||||||  || ||||||| |||||||| || || ||   |||||| ||||||||||||| || |||||||||||||||||||    
T  39012292 acccactttggttggcctagtggtgttggcttgggaccttggagtgtgctcttctcaaggtcttaggtttgattcccctcggtgccaatttcggtgggct 39012391  T
Q  124 a 124  Q
    |    
T  39012392 a 39012392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 30; E-Value: 0.00000005
Query Start/End: Original strand, 27 - 136
Target Start/End: Complemental strand, 49101843 - 49101732
Alignment:
Q  27 acccatttgggttggtctagtg--gttgacttgggatcttggagtttgttcctccagaggtctcaggtttgattccctctg-tgccaatttcggtgggct 123  Q
    ||||||||||||||| ||||||  |||| |||  || |||||||| || |||||   |||||| |  |||||||||| ||| |||||||| |||||||||    
T  49101843 acccatttgggttggcctagtgttgttggcttcagaccttggagtgtgctcctctcaaggtcttacatttgattccccctggtgccaatt-cggtgggct 49101745  T
Q  124 aagtccatacaga 136  Q
    |||||||||||||    
T  49101744 aagtccatacaga 49101732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 29; E-Value: 0.0000002
Query Start/End: Original strand, 27 - 78
Target Start/End: Complemental strand, 9926350 - 9926298
Alignment:
Q  27 acccatttgg-gttggtctagtggttgacttgggatcttggagtttgttcctc 78  Q
    |||||||||| | ||||||||| ||||||||||||||||||||| || |||||    
T  9926350 acccatttggagctggtctagtagttgacttgggatcttggagtgtgctcctc 9926298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 28; E-Value: 0.0000008
Query Start/End: Original strand, 35 - 78
Target Start/End: Original strand, 37349527 - 37349570
Alignment:
Q  35 gggttggtctagtggttgacttgggatcttggagtttgttcctc 78  Q
    |||||||| |||||||||||||| |||||| ||||||| |||||    
T  37349527 gggttggtttagtggttgacttgagatcttagagtttgctcctc 37349570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 90; Significance: 8e-44; HSPs: 57)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 90; E-Value: 8e-44
Query Start/End: Original strand, 35 - 151
Target Start/End: Complemental strand, 8484854 - 8484737
Alignment:
Q  35 gggttggtctagtggttgacttgggatcttggagtttgttcctccagaggtctcaggtttgattccctct-gtgccaatttcggtgggctaagtccatac 133  Q
    ||||||| |||||||||| ||||||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||||||| |||||    
T  8484854 gggttggcctagtggttggcttgggatcttggagtttgctcctccagaggtctcaggtttgattccctctggtgccaatttcggtgggctaagttcatac 8484755  T
Q  134 agatcttgctctggcttt 151  Q
    ||| ||||||||||||||    
T  8484754 agagcttgctctggcttt 8484737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 90; E-Value: 8e-44
Query Start/End: Original strand, 35 - 151
Target Start/End: Original strand, 38684212 - 38684329
Alignment:
Q  35 gggttggtctagtggttgacttgggatcttggagtttgttcctccagaggtctcaggtttgattccctct-gtgccaatttcggtgggctaagtccatac 133  Q
    ||||||| | |||||||||||||||||||||||||||| |||||||||||||||||||| |||||||||| |||||||||||||||||||||||||||||    
T  38684212 gggttggcccagtggttgacttgggatcttggagtttgctcctccagaggtctcaggttcgattccctctggtgccaatttcggtgggctaagtccatac 38684311  T
Q  134 agatcttgctctggcttt 151  Q
    ||| ||||||||||||||    
T  38684312 agagcttgctctggcttt 38684329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 87; E-Value: 5e-42
Query Start/End: Original strand, 27 - 151
Target Start/End: Complemental strand, 11926704 - 11926578
Alignment:
Q  27 acccatttggg-ttggtctagtggttgacttgggatcttggagtttgttcctccagaggtctcaggtttgattccctct-gtgccaatttcggtgggcta 124  Q
    ||||||||||| |||| ||||||||||  |||||||||||||||||| |||||||||||||||||||| |||||||||| ||||||||||||||||||||    
T  11926704 acccatttggggttggcctagtggttggtttgggatcttggagtttgctcctccagaggtctcaggttagattccctctggtgccaatttcggtgggcta 11926605  T
Q  125 agtccatacagatcttgctctggcttt 151  Q
    |||||||||||| ||||||||||||||    
T  11926604 agtccatacagagcttgctctggcttt 11926578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 87; E-Value: 5e-42
Query Start/End: Original strand, 27 - 151
Target Start/End: Original strand, 25586927 - 25587053
Alignment:
Q  27 acccatttggg-ttggtctagtggttgacttgggatcttggagtttgttcctccagaggtctcaggtttgattccctct-gtgccaatttcggtgggcta 124  Q
    ||||||||||| |||| |||||||||| ||||||||||||||||||| |||||||||||||||||||| |||| ||||| ||||||||||||||||||||    
T  25586927 acccatttggggttggcctagtggttggcttgggatcttggagtttgctcctccagaggtctcaggttcgatttcctctggtgccaatttcggtgggcta 25587026  T
Q  125 agtccatacagatcttgctctggcttt 151  Q
    |||||||||||| ||||||||||||||    
T  25587027 agtccatacagagcttgctctggcttt 25587053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 83; E-Value: 1e-39
Query Start/End: Original strand, 27 - 151
Target Start/End: Complemental strand, 15641307 - 15641181
Alignment:
Q  27 acccatttggg-ttggtctagtggttgacttgggatcttggagtttgttcctccagaggtctcaggtttgattccctct-gtgccaatttcggtgggcta 124  Q
    ||||||||||| || | |||||||||| ||||||||||||||||||| |||||||||||||||||||| |||||||||| | ||||||||||||||||||    
T  15641307 acccatttggggttagcctagtggttggcttgggatcttggagtttgctcctccagaggtctcaggttcgattccctctggagccaatttcggtgggcta 15641208  T
Q  125 agtccatacagatcttgctctggcttt 151  Q
    |||||||||||| ||||||||||||||    
T  15641207 agtccatacagagcttgctctggcttt 15641181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 83; E-Value: 1e-39
Query Start/End: Original strand, 27 - 151
Target Start/End: Complemental strand, 32059642 - 32059516
Alignment:
Q  27 acccatttggg-ttggtctagtggttgacttgggatcttggagtttgttcctccagaggtctcaggtttgattccctct-gtgccaatttcggtgggcta 124  Q
    ||||||||||| |||| |||||||||| ||||||||||||||||||| ||||||| |||||||||||| |||||| ||| ||||||||||||||||||||    
T  32059642 acccatttggggttggcctagtggttggcttgggatcttggagtttgctcctccaaaggtctcaggttcgattccttctggtgccaatttcggtgggcta 32059543  T
Q  125 agtccatacagatcttgctctggcttt 151  Q
    |||||||||||| ||||||||||||||    
T  32059542 agtccatacagagcttgctctggcttt 32059516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 83; E-Value: 1e-39
Query Start/End: Original strand, 27 - 136
Target Start/End: Complemental strand, 33709702 - 33709592
Alignment:
Q  27 acccatttgggttggtctagtggttgacttgggatcttggagtttgttcctccagaggtctcaggtttgattccctct-gtgccaatttcggtgggctaa 125  Q
    ||||||||||||||| |||||||||| ||||||||||||||||||| |||||||||||||||| ||| |||||||||| |||||||||||||||||||||    
T  33709702 acccatttgggttggcctagtggttggcttgggatcttggagtttgctcctccagaggtctcaagttcgattccctctggtgccaatttcggtgggctaa 33709603  T
Q  126 gtccatacaga 136  Q
    |||||||||||    
T  33709602 gtccatacaga 33709592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 79; E-Value: 3e-37
Query Start/End: Original strand, 27 - 151
Target Start/End: Original strand, 34310137 - 34310263
Alignment:
Q  27 acccatttggg-ttggtctagtggttgacttgggatcttggagtttgttcctccagaggtctcaggtttgattccctct-gtgccaatttcggtgggcta 124  Q
    ||||||||||| |||| |||||||| | ||||| ||||||||||||| |||||||||||||||||||| |||||||||| |||||||||| |||||||||    
T  34310137 acccatttggggttggcctagtggtcggcttggaatcttggagtttgctcctccagaggtctcaggttcgattccctctggtgccaattttggtgggcta 34310236  T
Q  125 agtccatacagatcttgctctggcttt 151  Q
    |||||||||||| ||||||||||||||    
T  34310237 agtccatacagagcttgctctggcttt 34310263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 78; E-Value: 1e-36
Query Start/End: Original strand, 43 - 151
Target Start/End: Original strand, 37495059 - 37495168
Alignment:
Q  43 ctagtggttgacttgggatcttggagtttgttcctccagaggtctcaggtttgattccctct-gtgccaatttcggtgggctaagtccatacagatcttg 141  Q
    |||||||||| |||| |||||||||||||| |||||||||||||||||||| |||||||||| |||||||||| ||||||||||||||||||||| ||||    
T  37495059 ctagtggttggcttgagatcttggagtttgctcctccagaggtctcaggttcgattccctctggtgccaattttggtgggctaagtccatacagagcttg 37495158  T
Q  142 ctctggcttt 151  Q
    ||||||||||    
T  37495159 ctctggcttt 37495168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 75; E-Value: 7e-35
Query Start/End: Original strand, 27 - 151
Target Start/End: Complemental strand, 27498933 - 27498807
Alignment:
Q  27 acccatttggg-ttggtctagtggttgacttgggatcttggagtttgttcctccagaggtctcaggtttgattccctct-gtgccaatttcggtgggcta 124  Q
    ||||||||||| |||  |||||||||| ||||| ||||||||||||| ||||| |||||||||||||| |||||||||| ||||||||||||||||||||    
T  27498933 acccatttggggttgacctagtggttggcttggaatcttggagtttgctcctctagaggtctcaggttcgattccctctggtgccaatttcggtgggcta 27498834  T
Q  125 agtccatacagatcttgctctggcttt 151  Q
    |||||||||| | ||||||||||||||    
T  27498833 agtccatacatagcttgctctggcttt 27498807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 73; E-Value: 1e-33
Query Start/End: Original strand, 48 - 151
Target Start/End: Complemental strand, 19456389 - 19456286
Alignment:
Q  48 ggttgacttgggatcttggagtttgttcctccagaggtctcaggtttgattccctctg-tgccaatttcggtgggctaagtccatacagatcttgctctg 146  Q
    ||||| ||||||||||||||||||| |||||||||||||||||||| ||| ||||||| ||||||||||||||||||||||||||||||| |||||||||    
T  19456389 ggttggcttgggatcttggagtttgctcctccagaggtctcaggttcgat-ccctctggtgccaatttcggtgggctaagtccatacagagcttgctctg 19456291  T
Q  147 gcttt 151  Q
    |||||    
T  19456290 gcttt 19456286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 71; E-Value: 2e-32
Query Start/End: Original strand, 27 - 151
Target Start/End: Original strand, 30485823 - 30485949
Alignment:
Q  27 acccatttggg-ttggtctagtggttgacttgggatcttggagtttgttcctccagaggtctcaggtttgattccctct-gtgccaatttcggtgggcta 124  Q
    ||||||||||| |||| | || ||||| ||||||||||||||||||| |||| ||||||||||||||| ||||| |||| ||| ||||||||||||||||    
T  30485823 acccatttggggttggcccagcggttggcttgggatcttggagtttgctccttcagaggtctcaggttcgattcactctggtgtcaatttcggtgggcta 30485922  T
Q  125 agtccatacagatcttgctctggcttt 151  Q
    |||||||||||| ||||||||||||||    
T  30485923 agtccatacagagcttgctctggcttt 30485949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 71; E-Value: 2e-32
Query Start/End: Original strand, 35 - 136
Target Start/End: Complemental strand, 38631154 - 38631052
Alignment:
Q  35 gggttggtctagtggttgacttgggatcttggagtttgttcctccagaggtctcaggtttgattccctct-gtgccaatttcggtgggctaagtccatac 133  Q
    ||||||| |||||||||| ||||||||||||||||||| ||||||||||||||||| || |||||||||| |||||||||||| ||||||||||||||||    
T  38631154 gggttggcctagtggttggcttgggatcttggagtttgctcctccagaggtctcagattcgattccctctggtgccaatttcgatgggctaagtccatac 38631055  T
Q  134 aga 136  Q
    |||    
T  38631054 aga 38631052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 70; E-Value: 7e-32
Query Start/End: Original strand, 31 - 151
Target Start/End: Complemental strand, 6014477 - 6014356
Alignment:
Q  31 atttgggttggtctagtggttgacttgggatcttggagtttgttcctccagaggtctcaggtttgattccctct-gtgccaatttcggtgggctaagtcc 129  Q
    ||||||||||| |||||| ||| ||||||||||||||||||| | |||||||| ||||||||| |||| | ||| ||||||||||||||||| |||||||    
T  6014477 atttgggttggcctagtgattggcttgggatcttggagtttgcttctccagagatctcaggttcgattacttctggtgccaatttcggtgggttaagtcc 6014378  T
Q  130 atacagatcttgctctggcttt 151  Q
    ||||||| ||||||||||||||    
T  6014377 atacagagcttgctctggcttt 6014356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 70; E-Value: 7e-32
Query Start/End: Original strand, 35 - 151
Target Start/End: Complemental strand, 15971315 - 15971198
Alignment:
Q  35 gggttggtctagtggttgacttgggatcttggagtttgttcctccagaggtctcaggtttgattccctctg-tgccaatttcggtgggctaagtccatac 133  Q
    |||||||  ||||||||| ||||||||||||||||||| |||||||||||||||||||| |||| |||||| || |||||||||||||||||||||||||    
T  15971315 gggttggcttagtggttggcttgggatcttggagtttgctcctccagaggtctcaggttcgatttcctctgatgtcaatttcggtgggctaagtccatac 15971216  T
Q  134 agatcttgctctggcttt 151  Q
    | | ||||||||| ||||    
T  15971215 atagcttgctctgacttt 15971198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 70; E-Value: 7e-32
Query Start/End: Original strand, 55 - 151
Target Start/End: Original strand, 18207231 - 18207328
Alignment:
Q  55 ttgggatcttggagtttgttcctccagaggtctcaggtttgattccct-ctgtgccaatttcggtgggctaagtccatacagatcttgctctggcttt 151  Q
    |||||||||||||||||| |||||||||||||||||||| |||||||| | |||||||||||||||||||||||||||||||| |||| |||||||||    
T  18207231 ttgggatcttggagtttgctcctccagaggtctcaggttcgattccctccggtgccaatttcggtgggctaagtccatacagagcttgttctggcttt 18207328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 69; E-Value: 3e-31
Query Start/End: Original strand, 44 - 151
Target Start/End: Complemental strand, 7085810 - 7085702
Alignment:
Q  44 tagtggttgacttgggatcttggagtttgttcctccagaggtctcaggtttgattccctct-gtgccaatttcggtgggctaagtccatacagatcttgc 142  Q
    ||||||||| ||||||||||||||||||  ||||||||||||||| |||| |||||||||| ||| |||||||||||||||||||||||||||| |||||    
T  7085810 tagtggttggcttgggatcttggagttttctcctccagaggtctccggttcgattccctctagtgtcaatttcggtgggctaagtccatacagagcttgc 7085711  T
Q  143 tctggcttt 151  Q
    |||| ||||    
T  7085710 tctgacttt 7085702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 68; E-Value: 1e-30
Query Start/End: Original strand, 27 - 128
Target Start/End: Original strand, 22392696 - 22392796
Alignment:
Q  27 acccatttggg-ttggtctagtggttgacttgggatcttggagtttgttcctccagaggtctcaggtttgattccctctgtgccaatttcggtgggctaa 125  Q
    ||||||||||| |||| |||||||||| ||||||||||||||||||| |||||||||||||||||||| |||||||||  ||||||||||||||||||||    
T  22392696 acccatttggggttggcctagtggttggcttgggatcttggagtttgctcctccagaggtctcaggttcgattccctc--tgccaatttcggtgggctaa 22392793  T
Q  126 gtc 128  Q
    |||    
T  22392794 gtc 22392796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 68; E-Value: 1e-30
Query Start/End: Original strand, 35 - 150
Target Start/End: Complemental strand, 25750804 - 25750686
Alignment:
Q  35 gggttggtctagtggttgacttgggatcttggagtttgttcctccagaggtctcaggtttg--attccctct-gtgccaatttcggtgggctaagtccat 131  Q
    ||||||| |||||||||||||||||||||||||||||| |||||||||||||||| ||| |  ||||| ||| ||||||||||||||||| |||||||||    
T  25750804 gggttggcctagtggttgacttgggatcttggagtttgctcctccagaggtctcaagttggatattccttctggtgccaatttcggtgggttaagtccat 25750705  T
Q  132 acagatcttgctctggctt 150  Q
    | ||| |||||||||||||    
T  25750704 atagagcttgctctggctt 25750686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 68; E-Value: 1e-30
Query Start/End: Original strand, 37 - 151
Target Start/End: Original strand, 42193491 - 42193606
Alignment:
Q  37 gttggtctagtggttgacttgggatcttggagtttgttcctccagaggtctcaggtttgattccctctg-tgccaatttcggtgggctaagtccatacag 135  Q
    ||||| |||||||||||||||||||||||||||||| | | |||||||||||||||| |||| |||||| ||||||||||||||||||||||| ||||||    
T  42193491 gttggcctagtggttgacttgggatcttggagtttgcttccccagaggtctcaggttcgatttcctctgatgccaatttcggtgggctaagtctatacag 42193590  T
Q  136 atcttgctctggcttt 151  Q
    |  ||||| |||||||    
T  42193591 agtttgctttggcttt 42193606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 67; E-Value: 4e-30
Query Start/End: Original strand, 27 - 151
Target Start/End: Complemental strand, 23270724 - 23270598
Alignment:
Q  27 acccatttggg-ttggtctagtggttgacttgggatcttggagtttgttcctccagaggtctcaggtttgattccctctg-tgccaatttcggtgggcta 124  Q
    ||||||||||| |||| |||||||||| ||||||||||||||||||| || |||| |||||||| ||| |||| |||| | |||||||||||||||||||    
T  23270724 acccatttggggttggcctagtggttggcttgggatcttggagtttgctcatccaaaggtctcaagttcgatttcctccgatgccaatttcggtgggcta 23270625  T
Q  125 agtccatacagatcttgctctggcttt 151  Q
    |||||||||||| |||||| |||||||    
T  23270624 agtccatacagagcttgctttggcttt 23270598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 66; E-Value: 2e-29
Query Start/End: Original strand, 35 - 151
Target Start/End: Original strand, 4603781 - 4603898
Alignment:
Q  35 gggttggtctagtggttgacttgggatcttggagtttgttcctccagaggtctcaggtttgattccctct-gtgccaatttcggtgggctaagtccatac 133  Q
    ||||||| |||||||||| ||||||||||||||||||| ||||||| || ||||| ||| |||||| ||| |||||||||||| ||||||||||||||||    
T  4603781 gggttggcctagtggttggcttgggatcttggagtttgctcctccaaagatctcaagttcgattccttctggtgccaatttcgatgggctaagtccatac 4603880  T
Q  134 agatcttgctctggcttt 151  Q
    ||| || |||||||||||    
T  4603881 agagctcgctctggcttt 4603898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 66; E-Value: 2e-29
Query Start/End: Original strand, 35 - 151
Target Start/End: Complemental strand, 27487748 - 27487631
Alignment:
Q  35 gggttggtctagtggttgacttgggatcttggagtttgttcctccagaggtctcaggtttgattccctct-gtgccaatttcggtgggctaagtccatac 133  Q
    ||||||| ||||||||||| ||||||| |||||||||| || ||||||||||||||||||||| || | | |||||||||||||||| ||||||||||||    
T  27487748 gggttggcctagtggttgatttgggattttggagtttgctcttccagaggtctcaggtttgatcccatttggtgccaatttcggtggactaagtccatac 27487649  T
Q  134 agatcttgctctggcttt 151  Q
    ||| |||||||| |||||    
T  27487648 agagcttgctctagcttt 27487631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 65; E-Value: 6e-29
Query Start/End: Original strand, 27 - 141
Target Start/End: Complemental strand, 1827732 - 1827616
Alignment:
Q  27 acccatttggg-ttggtctagtggttgacttgggatcttggagtttgttcctccagaggtctcaggtttgattccctctg-tgccaatttcggtgggcta 124  Q
    ||||||||||| |||  |||||||||| |||| |||||||||||||| |||||||||||||||||||| ||||||||||| | |||||||||||||| ||    
T  1827732 acccatttggggttgacctagtggttggcttgagatcttggagtttgctcctccagaggtctcaggttcgattccctctgataccaatttcggtgggtta 1827633  T
Q  125 agtccatacagatcttg 141  Q
    |||||||||||| ||||    
T  1827632 agtccatacagagcttg 1827616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 65; E-Value: 6e-29
Query Start/End: Original strand, 32 - 143
Target Start/End: Complemental strand, 31288142 - 31288030
Alignment:
Q  32 tttgggttggtctagtggttgacttgggatcttggagtttgttcctccagaggtctcaggtttgattccctct-gtgccaatttcggtgggctaagtcca 130  Q
    |||||||||| |||||||||| ||||||||||||||||||| ||||||| |||||||| ||| |||||||| | ||||||||||||||||| ||||||||    
T  31288142 tttgggttggcctagtggttggcttgggatcttggagtttgctcctccaaaggtctcatgttcgattccctttggtgccaatttcggtgggttaagtcca 31288043  T
Q  131 tacagatcttgct 143  Q
    |||| | ||||||    
T  31288042 tacaaagcttgct 31288030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 64; E-Value: 3e-28
Query Start/End: Original strand, 27 - 136
Target Start/End: Complemental strand, 13038656 - 13038545
Alignment:
Q  27 acccatttggg-ttggtctagtggttgacttgggatcttggagtttgttcctccagaggtctcaggtttgattccctct-gtgccaatttcggtgggcta 124  Q
    ||||||||||| |||| ||||||||||  |||||||||||||||||| |||||||||||||||||||| |||||||||| |||||||||| | |||||||    
T  13038656 acccatttggggttggcctagtggttggtttgggatcttggagtttgctcctccagaggtctcaggttcgattccctctggtgccaattttgatgggcta 13038557  T
Q  125 agtccatacaga 136  Q
    ||| ||||||||    
T  13038556 agttcatacaga 13038545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 64; E-Value: 3e-28
Query Start/End: Original strand, 27 - 136
Target Start/End: Complemental strand, 13108651 - 13108540
Alignment:
Q  27 acccatttggg-ttggtctagtggttgacttgggatcttggagtttgttcctccagaggtctcaggtttgattccctct-gtgccaatttcggtgggcta 124  Q
    ||||||||||| |||| |||||||||| ||||||||||||||||||| |||||||||| ||||||||| |||||||||| |||||||||| | |||||||    
T  13108651 acccatttggggttggcctagtggttggcttgggatcttggagtttgctcctccagagatctcaggttcgattccctctggtgccaattttgatgggcta 13108552  T
Q  125 agtccatacaga 136  Q
    ||| ||||||||    
T  13108551 agttcatacaga 13108540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 64; E-Value: 3e-28
Query Start/End: Original strand, 26 - 151
Target Start/End: Original strand, 36954812 - 36954939
Alignment:
Q  26 tacccatttggg-ttggtctagtggttgacttgggatcttggagtttgttcctccagaggtctcaggtttgattccctct-gtgccaatttcggtgggct 123  Q
    |||||||||||| |||| |||||||||| ||||||||||||||||||| ||||| |||||||||||||| |||||||||| || | |||||||| | |||    
T  36954812 tacccatttggggttggcctagtggttgccttgggatcttggagtttgctcctctagaggtctcaggttcgattccctctggttctaatttcggcgtgct 36954911  T
Q  124 aagtccatacagatcttgctctggcttt 151  Q
    |||||||||||||  ||||| |||||||    
T  36954912 aagtccatacagagtttgctttggcttt 36954939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 63; E-Value: 1e-27
Query Start/End: Original strand, 46 - 151
Target Start/End: Complemental strand, 10869747 - 10869641
Alignment:
Q  46 gtggttgacttgggatcttggagtttgttcctccagaggtctcaggtttgattccctct-gtgccaatttcggtgggctaagtccatacagatcttgctc 144  Q
    |||||||||||| |||||||||||||| ||||||| |||||||||||| |||||| ||| || ||||||||||||||||||||||| || || |||||||    
T  10869747 gtggttgacttgcgatcttggagtttgctcctccaaaggtctcaggttcgattccatctggttccaatttcggtgggctaagtccacactgagcttgctc 10869648  T
Q  145 tggcttt 151  Q
    |||||||    
T  10869647 tggcttt 10869641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 48 - 151
Target Start/End: Complemental strand, 12398628 - 12398524
Alignment:
Q  48 ggttgacttgggatcttggagtttgttcctccagaggtctcaggtttgattccctct-gtgccaatttcggtgggctaagtccatacagatcttgctctg 146  Q
    ||||| ||||||||||||||||||| ||||||| |||||||||||| |||||||| | ||| |||||||||||| |||||| |||||||| |||||||||    
T  12398628 ggttggcttgggatcttggagtttgctcctccaaaggtctcaggttcgattccctatggtgtcaatttcggtggcctaagttcatacagagcttgctctg 12398529  T
Q  147 gcttt 151  Q
    |||||    
T  12398528 gcttt 12398524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 59; E-Value: 2e-25
Query Start/End: Original strand, 27 - 151
Target Start/End: Original strand, 15931054 - 15931179
Alignment:
Q  27 acccatttggg-ttggtctagtggttgacttgggatcttggagtttgttcctccagaggtctcaggtttgattccctct-gtgccaatttcggtgggcta 124  Q
    ||||||||||| |||| |||||||||  ||||||||||||||||||| | || || | |||||||||| |||||||||| |||||||||||||| |||||    
T  15931054 acccatttggggttggcctagtggttagcttgggatcttggagtttgcttcttcacaagtctcaggttcgattccctctggtgccaatttcggt-ggcta 15931152  T
Q  125 agtccatacagatcttgctctggcttt 151  Q
    |||||||||||| | ||||||||||||    
T  15931153 agtccatacagagcctgctctggcttt 15931179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 59; E-Value: 2e-25
Query Start/End: Original strand, 35 - 151
Target Start/End: Complemental strand, 19145604 - 19145487
Alignment:
Q  35 gggttggtctagtggttgacttgggatcttggagtttgttcctccagaggtctcaggtttgattccctct-gtgccaatttcggtgggctaagtccatac 133  Q
    ||||||| ||||||||||||||||||||||||||| || |||||   ||||||| |||| |||||||||| |||||||||||||||||| ||||||||||    
T  19145604 gggttggcctagtggttgacttgggatcttggagtatgctcctctcaaggtctccggttcgattccctctggtgccaatttcggtgggc-aagtccatac 19145506  T
Q  134 agatc-ttgctctggcttt 151  Q
    ||| | |||||||||||||    
T  19145505 agagctttgctctggcttt 19145487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 55; E-Value: 6e-23
Query Start/End: Original strand, 27 - 151
Target Start/End: Complemental strand, 11465109 - 11464983
Alignment:
Q  27 acccattt-gggttggtctagtggttgacttgggatcttggagtttgttcctccagaggtctcaggtttgattccctctg-tgccaatttcggtgggcta 124  Q
    |||||||| ||||||| |||||| ||| ||||  ||||||||||||| ||||||| | |||||||||| |||| |||||| ||||||||| |||||||||    
T  11465109 acccatttcgggttggcctagtgattggcttgaaatcttggagtttgctcctccaaatgtctcaggttcgatttcctctggtgccaattttggtgggcta 11465010  T
Q  125 agtccatacagatcttgctctggcttt 151  Q
    ||| |||||||| ||| ||||||||||    
T  11465009 agttcatacagagcttactctggcttt 11464983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 53; E-Value: 9e-22
Query Start/End: Original strand, 29 - 151
Target Start/End: Original strand, 10399770 - 10399894
Alignment:
Q  29 ccatttgg-gttggtctagtggttgacttgggatcttggagtttgttcctccagaggtctcaggtttgattccctct-gtgccaatttcggtgggctaag 126  Q
    |||||||| |||||||||||||||||||| ||||||||||||||| | || || || | ||||||||||||| |||| | |||||||||| |||||||||    
T  10399770 ccatttggtgttggtctagtggttgactttggatcttggagtttgcttcttcaaagatttcaggtttgattctctctggcgccaatttcgatgggctaag 10399869  T
Q  127 tccatacagatcttgctctggcttt 151  Q
    ||||||| || | ||||||| ||||    
T  10399870 tccatacggagcatgctctgacttt 10399894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 51; E-Value: 1e-20
Query Start/End: Original strand, 27 - 151
Target Start/End: Original strand, 34049817 - 34049932
Alignment:
Q  27 acccatttggg-ttggtctagtggttgacttgggatcttggagtttgttcctccagaggtctcaggtttgattccctctgtgccaatttcggtgggctaa 125  Q
    ||||||||||| |||| ||||| |||| ||||||||||||||||||| |||||||||||||||||||| |||||| ||          | ||||||||||    
T  34049817 acccatttggggttgggctagtagttggcttgggatcttggagtttgctcctccagaggtctcaggttcgattccttc----------taggtgggctaa 34049906  T
Q  126 gtccatacagatcttgctctggcttt 151  Q
    ||||||||||| ||||||||||||||    
T  34049907 gtccatacagagcttgctctggcttt 34049932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 50; E-Value: 6e-20
Query Start/End: Original strand, 48 - 136
Target Start/End: Original strand, 7151346 - 7151435
Alignment:
Q  48 ggttgacttgggatcttggagtttgttcctccagaggtctcaggtttgattccctct-gtgccaatttcggtgggctaagtccatacaga 136  Q
    ||||| ||||||||||||||||||| ||||| |||||||| ||||| || ||||||| | | ||||||||||||||||||||||||||||    
T  7151346 ggttggcttgggatcttggagtttgctcctcaagaggtcttaggttcgactccctctggcgtcaatttcggtgggctaagtccatacaga 7151435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 49; E-Value: 2e-19
Query Start/End: Original strand, 27 - 98
Target Start/End: Original strand, 5067296 - 5067368
Alignment:
Q  27 acccatttgg-gttggtctagtggttgacttgggatcttggagtttgttcctccagaggtctcaggtttgatt 98  Q
    |||||||||| |||||||||||||||||||||||||||| ||||||| |||||||||| ||||||||| ||||    
T  5067296 acccatttggagttggtctagtggttgacttgggatcttcgagtttgctcctccagagatctcaggttcgatt 5067368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 47; E-Value: 4e-18
Query Start/End: Original strand, 35 - 101
Target Start/End: Original strand, 37397717 - 37397783
Alignment:
Q  35 gggttggtctagtggttgacttgggatcttggagtttgttcctccagaggtctcaggtttgattccc 101  Q
    |||||||||||||||||| |||| |||||||||||||| ||||||| |||||| |||||||||||||    
T  37397717 gggttggtctagtggttggcttgtgatcttggagtttgctcctccaaaggtctaaggtttgattccc 37397783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 46; E-Value: 1e-17
Query Start/End: Original strand, 27 - 130
Target Start/End: Complemental strand, 12317352 - 12317247
Alignment:
Q  27 acccatttggg-ttggtctagtggttgacttgggatcttggagtttgttcctccagaggtctcaggtttgattccctct-gtgccaatttcggtgggcta 124  Q
    ||||||||||| |||| |||||||||| ||||| ||||||||||||| |||||  |||||||| ||||||||| | ||| ||| ||||||||||||| ||    
T  12317352 acccatttggggttggcctagtggttggcttggaatcttggagtttgctcctcttgaggtctcgggtttgatttcatctggtgtcaatttcggtgggtta 12317253  T
Q  125 agtcca 130  Q
    ||||||    
T  12317252 agtcca 12317247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 41; E-Value: 0.00000000000001
Query Start/End: Original strand, 35 - 134
Target Start/End: Complemental strand, 22253338 - 22253238
Alignment:
Q  35 gggttggtctagtggttgacttgggatcttggagtttgttcctccagaggtctcaggtttgattccctct-gtgccaatttcggtgggctaagtccatac 133  Q
    |||||||||||||||||| ||||||||||| || |||| |||||   || ||||||||| || |  |||| |||||||||||| ||||||||||||||||    
T  22253338 gggttggtctagtggttggcttgggatctttgactttgctcctctctagatctcaggttcgactttctctagtgccaatttcgatgggctaagtccatac 22253239  T
Q  134 a 134  Q
    |    
T  22253238 a 22253238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 39; E-Value: 0.0000000000002
Query Start/End: Original strand, 48 - 133
Target Start/End: Complemental strand, 17015593 - 17015507
Alignment:
Q  48 ggttgacttgggatcttggagtttgttcctccagaggtctcaggtttgattccctct-gtgccaatttcggtgggctaagtccatac 133  Q
    ||||| |||| ||||||| |||||  || | |||||||||||||||||||||||||| |||||||||||  |||| |||||||||||    
T  17015593 ggttggcttgagatcttgaagtttcctctttcagaggtctcaggtttgattccctctggtgccaatttcattgggataagtccatac 17015507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 39; E-Value: 0.0000000000002
Query Start/End: Original strand, 105 - 151
Target Start/End: Original strand, 35425088 - 35425134
Alignment:
Q  105 gtgccaatttcggtgggctaagtccatacagatcttgctctggcttt 151  Q
    |||||||||||||||||||||||||||||||| || |||||||||||    
T  35425088 gtgccaatttcggtgggctaagtccatacagagctcgctctggcttt 35425134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 38; E-Value: 0.0000000000008
Query Start/End: Original strand, 43 - 151
Target Start/End: Complemental strand, 26009449 - 26009340
Alignment:
Q  43 ctagtggttgacttgggatcttggagtttgttcctccagaggtctcaggtttgattccctctg-tgccaatttcggtgggctaagtccatacagatcttg 141  Q
    ||||||||||  |||||||||  ||||||  ||||| | |||| || |||| |||||||| || |||||||||| ||||||||||||||| |||| |||     
T  26009449 ctagtggttggtttgggatctcagagtttactcctcgaaaggtttccggttcgattccctttggtgccaatttcagtgggctaagtccatgcagagctta 26009350  T
Q  142 ctctggcttt 151  Q
    ||||||||||    
T  26009349 ctctggcttt 26009340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 37; E-Value: 0.000000000003
Query Start/End: Original strand, 42 - 98
Target Start/End: Complemental strand, 14302885 - 14302829
Alignment:
Q  42 tctagtggttgacttgggatcttggagtttgttcctccagaggtctcaggtttgatt 98  Q
    ||||||||||||||||||||||| |||| || | ||| |||||||||||||||||||    
T  14302885 tctagtggttgacttgggatcttagagtgtgcttctctagaggtctcaggtttgatt 14302829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 36; E-Value: 0.00000000001
Query Start/End: Original strand, 45 - 151
Target Start/End: Complemental strand, 28614667 - 28614561
Alignment:
Q  45 agtggttgacttgggatcttggagtttgttcctccagaggtctcaggtttgattccctctg-tgccaatttcggtgggctaagtccatacagatcttgct 143  Q
    |||||||| |||| |||||| ||||||||||||||| || ||||||||| |||| |||||| || ||| ||||||| | |||||||||||| | |||| |    
T  28614667 agtggttggcttgagatcttagagtttgttcctccaaagatctcaggttcgattacctctgatgtcaa-ttcggtgagataagtccatacaaagcttgtt 28614569  T
Q  144 ctggcttt 151  Q
    ||| ||||    
T  28614568 ctgacttt 28614561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 35; E-Value: 0.00000000005
Query Start/End: Original strand, 109 - 151
Target Start/End: Complemental strand, 9659429 - 9659387
Alignment:
Q  109 caatttcggtgggctaagtccatacagatcttgctctggcttt 151  Q
    |||||||||||||||||||||||||| | ||||||||||||||    
T  9659429 caatttcggtgggctaagtccatacacagcttgctctggcttt 9659387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 35; E-Value: 0.00000000005
Query Start/End: Original strand, 27 - 124
Target Start/End: Complemental strand, 14495880 - 14495779
Alignment:
Q  27 acccatttgggttggtctagtgg--ttgacttgggatcttggagtttgttcctcc-agaggtctcaggtttgattccctctg-tgccaatttcggtgggc 122  Q
    |||||||||||||||||| ||||  |||||||||||||| ||||| || ||||||  |||||||||| |||||||| ||| | ||||||||| | |||||    
T  14495880 acccatttgggttggtctggtggtattgacttgggatctgggagtgtgctcctcctcgaggtctcagatttgattctctccgatgccaatttagatgggc 14495781  T
Q  123 ta 124  Q
    ||    
T  14495780 ta 14495779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 32; E-Value: 0.000000003
Query Start/End: Original strand, 37 - 72
Target Start/End: Complemental strand, 204215 - 204180
Alignment:
Q  37 gttggtctagtggttgacttgggatcttggagtttg 72  Q
    ||||||||||||||||||||| ||||||||||||||    
T  204215 gttggtctagtggttgacttgtgatcttggagtttg 204180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 32; E-Value: 0.000000003
Query Start/End: Original strand, 35 - 82
Target Start/End: Complemental strand, 3715102 - 3715055
Alignment:
Q  35 gggttggtctagtggttgacttgggatcttggagtttgttcctccaga 82  Q
    ||||||| ||||||||||  |||||||||||||||||| |||||||||    
T  3715102 gggttggcctagtggttggtttgggatcttggagtttgctcctccaga 3715055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 32; E-Value: 0.000000003
Query Start/End: Original strand, 27 - 125
Target Start/End: Original strand, 16773808 - 16773910
Alignment:
Q  27 acccatttgggttggtctagtggt--tgacttgggatcttggagtttgttcctcca-gaggtctcaggtttgattccctctg-tgccaatttcggtgggc 122  Q
    ||||| ||| |||||||| |||||  |||||||||| || ||||| || ||||||  ||||||||||||| ||||| ||||| ||||||||| |||||||    
T  16773808 acccacttgagttggtctggtggtattgacttgggacctgggagtgtgctcctcctcgaggtctcaggttcgattctctctgatgccaatttaggtgggc 16773907  T
Q  123 taa 125  Q
    |||    
T  16773908 taa 16773910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 32; E-Value: 0.000000003
Query Start/End: Original strand, 58 - 136
Target Start/End: Complemental strand, 21236532 - 21236453
Alignment:
Q  58 ggatcttggagtttgttcctccagaggtctcaggtttgattccctct-gtgccaatttcggtgggctaagtccatacaga 136  Q
    ||||||||||||||  |||| |||||||||  |||| ||||| |||| ||| |||||||  |||||||||||||||||||    
T  21236532 ggatcttggagttttctccttcagaggtcttcggttcgattctctctagtgtcaatttcaatgggctaagtccatacaga 21236453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 31; E-Value: 0.00000001
Query Start/End: Original strand, 82 - 151
Target Start/End: Original strand, 5049188 - 5049258
Alignment:
Q  82 aggtctcaggtttgattccctctg-tgccaatttcggtgggctaagtccatacagatcttgctctggcttt 151  Q
    ||||||||| ||  |||||||||| | ||||||||| ||| |||||| |||||||| ||||||||||||||    
T  5049188 aggtctcagattcaattccctctggtaccaatttcgatggtctaagttcatacagagcttgctctggcttt 5049258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 31; E-Value: 0.00000001
Query Start/End: Original strand, 83 - 136
Target Start/End: Complemental strand, 32061255 - 32061202
Alignment:
Q  83 ggtctcaggtttgattccctctg-tgccaatttcggtgggctaagtccatacaga 136  Q
    ||||||||||||||||||||||| ||||| ||| |||||||| ||||||||||||    
T  32061255 ggtctcaggtttgattccctctgatgccagttttggtgggct-agtccatacaga 32061202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 29; E-Value: 0.0000002
Query Start/End: Original strand, 82 - 125
Target Start/End: Complemental strand, 17028281 - 17028237
Alignment:
Q  82 aggtctcaggtttgattccctct-gtgccaatttcggtgggctaa 125  Q
    ||||||||||||||||||||||| ||| |||||| ||||||||||    
T  17028281 aggtctcaggtttgattccctctagtgtcaatttaggtgggctaa 17028237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #55
Raw Score: 29; E-Value: 0.0000002
Query Start/End: Original strand, 85 - 136
Target Start/End: Complemental strand, 41569011 - 41568959
Alignment:
Q  85 tctcaggtttgattccctct-gtgccaatttcggtgggctaagtccatacaga 136  Q
    ||||||||| |||| ||||| ||| |||||||||||| |||||||||||||||    
T  41569011 tctcaggttcgatttcctcttgtgtcaatttcggtggactaagtccatacaga 41568959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #56
Raw Score: 28; E-Value: 0.0000008
Query Start/End: Original strand, 82 - 136
Target Start/End: Original strand, 31206293 - 31206348
Alignment:
Q  82 aggtctcaggtttgattccctctg-tgccaatttcggtgggctaagtccatacaga 136  Q
    ||||||||||||| |||||| ||| ||||||||||  ||| |||||||||||||||    
T  31206293 aggtctcaggttttattccccctggtgccaatttcattggcctaagtccatacaga 31206348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #57
Raw Score: 28; E-Value: 0.0000008
Query Start/End: Original strand, 33 - 69
Target Start/End: Complemental strand, 43241751 - 43241713
Alignment:
Q  33 ttgggttggtctagtggt--tgacttgggatcttggagt 69  Q
    ||||||||||||||||||  |||||||||||||||||||    
T  43241751 ttgggttggtctagtggtattgacttgggatcttggagt 43241713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0576 (Bit Score: 87; Significance: 5e-42; HSPs: 1)
Name: scaffold0576
Description:

Target: scaffold0576; HSP #1
Raw Score: 87; E-Value: 5e-42
Query Start/End: Original strand, 27 - 151
Target Start/End: Complemental strand, 5284 - 5158
Alignment:
Q  27 acccatttggg-ttggtctagtggttgacttgggatcttggagtttgttcctccagaggtctcaggtttgattccctct-gtgccaatttcggtgggcta 124  Q
    ||||||||||| |||| |||||||||| ||||||||||||||||||| ||||||| |||||||||||| |||||||||| ||||||||||||||||||||    
T  5284 acccatttggggttggcctagtggttggcttgggatcttggagtttgctcctccaaaggtctcaggttcgattccctctggtgccaatttcggtgggcta 5185  T
Q  125 agtccatacagatcttgctctggcttt 151  Q
    |||||||||||| ||||||||||||||    
T  5184 agtccatacagagcttgctctggcttt 5158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 87; Significance: 5e-42; HSPs: 55)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 87; E-Value: 5e-42
Query Start/End: Original strand, 27 - 151
Target Start/End: Original strand, 25852209 - 25852335
Alignment:
Q  27 acccatttggg-ttggtctagtggttgacttgggatcttggagtttgttcctccagaggtctcaggtttgattccctct-gtgccaatttcggtgggcta 124  Q
    ||||||||||| |||| |||||||||| ||||||||||||||||||| ||||||| |||||||||||| |||||||||| ||||||||||||||||||||    
T  25852209 acccatttggggttggcctagtggttggcttgggatcttggagtttgctcctccaaaggtctcaggttcgattccctctggtgccaatttcggtgggcta 25852308  T
Q  125 agtccatacagatcttgctctggcttt 151  Q
    |||||||||||| ||||||||||||||    
T  25852309 agtccatacagagcttgctctggcttt 25852335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 87; E-Value: 5e-42
Query Start/End: Original strand, 27 - 151
Target Start/End: Complemental strand, 33696481 - 33696355
Alignment:
Q  27 acccattt-gggttggtctagtggttgacttgggatcttggagtttgttcctccagaggtctcaggtttgattccctct-gtgccaatttcggtgggcta 124  Q
    |||||||| ||||||| |||||||||| ||||||||||||||||||| ||||||||||||||||||||  ||||||||| ||||||||||||||||||||    
T  33696481 acccatttagggttggcctagtggttggcttgggatcttggagtttgctcctccagaggtctcaggttcaattccctctggtgccaatttcggtgggcta 33696382  T
Q  125 agtccatacagatcttgctctggcttt 151  Q
    |||||||||||| ||||||||||||||    
T  33696381 agtccatacagagcttgctctggcttt 33696355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 86; E-Value: 2e-41
Query Start/End: Original strand, 35 - 151
Target Start/End: Complemental strand, 27528988 - 27528871
Alignment:
Q  35 gggttggtctagtggttgacttgggatcttggagtttgttcctccagaggtctcaggtttgattccctct-gtgccaatttcggtgggctaagtccatac 133  Q
    |||||||  ||||||||| ||||||||||||||||||| |||||||||||||||||||| |||||||||| |||||||||||||||||||||||||||||    
T  27528988 gggttggcttagtggttggcttgggatcttggagtttgctcctccagaggtctcaggttcgattccctctggtgccaatttcggtgggctaagtccatac 27528889  T
Q  134 agatcttgctctggcttt 151  Q
    ||| ||||||||||||||    
T  27528888 agagcttgctctggcttt 27528871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 86; E-Value: 2e-41
Query Start/End: Original strand, 30 - 151
Target Start/End: Original strand, 35229167 - 35229288
Alignment:
Q  30 catttgggttggtctagtggttgacttgggatcttggagtttgttcctccagaggtctcaggtttgattccctctgtgccaatttcggtgggctaagtcc 129  Q
    |||||||||||| |||||||||| ||||||||||||||||||| |||||||||||||||||||| |||||| ||| ||||||||||||||||||||||||    
T  35229167 catttgggttggcctagtggttggcttgggatcttggagtttgctcctccagaggtctcaggttcgattccttctatgccaatttcggtgggctaagtcc 35229266  T
Q  130 atacagatcttgctctggcttt 151  Q
    ||||| | ||||||||| ||||    
T  35229267 atacatagcttgctctgacttt 35229288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 83; E-Value: 1e-39
Query Start/End: Original strand, 27 - 151
Target Start/End: Complemental strand, 19660734 - 19660608
Alignment:
Q  27 acccatttgg-gttggtctagtggttgacttgggatcttggagtttgttcctccagaggtctcaggtttgattccctctg-tgccaatttcggtgggcta 124  Q
    |||||||||| ||||| |||||||||| ||||||||||||||||||| |||||||||||||||||||||||||| ||||| ||| |||||||||||| ||    
T  19660734 acccatttggagttggcctagtggttggcttgggatcttggagtttgctcctccagaggtctcaggtttgattctctctgatgcaaatttcggtgggata 19660635  T
Q  125 agtccatacagatcttgctctggcttt 151  Q
    |||||||||||| ||||||||||||||    
T  19660634 agtccatacagagcttgctctggcttt 19660608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 83; E-Value: 1e-39
Query Start/End: Original strand, 27 - 151
Target Start/End: Original strand, 32986192 - 32986318
Alignment:
Q  27 acccatttggg-ttggtctagtggttgacttgggatcttggagtttgttcctccagaggtctcaggtttgattccctct-gtgccaatttcggtgggcta 124  Q
    ||||||||||| |||| |||||||||| ||||||||||||||||||| ||||||||||||||||||||  ||||||||| ||||||||||||||||||||    
T  32986192 acccatttggggttggcctagtggttggcttgggatcttggagtttgctcctccagaggtctcaggttcaattccctctggtgccaatttcggtgggcta 32986291  T
Q  125 agtccatacagatcttgctctggcttt 151  Q
    |||||||||||| ||||||||| ||||    
T  32986292 agtccatacagagcttgctctgacttt 32986318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 83; E-Value: 1e-39
Query Start/End: Original strand, 27 - 151
Target Start/End: Complemental strand, 40059054 - 40058928
Alignment:
Q  27 acccatttggg-ttggtctagtggttgacttgggatcttggagtttgttcctccagaggtctcaggtttgattccctct-gtgccaatttcggtgggcta 124  Q
    ||||||||||| |||| |||||||||| ||||||||||||||||||| ||||| |||||||||||||| ||||| |||| ||||||||||||||||||||    
T  40059054 acccatttggggttggcctagtggttggcttgggatcttggagtttgctcctctagaggtctcaggttcgattctctctggtgccaatttcggtgggcta 40058955  T
Q  125 agtccatacagatcttgctctggcttt 151  Q
    |||||||||||| ||||||||||||||    
T  40058954 agtccatacagagcttgctctggcttt 40058928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 83; E-Value: 1e-39
Query Start/End: Original strand, 27 - 151
Target Start/End: Original strand, 52983614 - 52983740
Alignment:
Q  27 acccatttggg-ttggtctagtggttgacttgggatcttggagtttgttcctccagaggtctcaggtttgattccctct-gtgccaatttcggtgggcta 124  Q
    ||||||||||| |||| |||||||||| |||| |||||||||||||| |||||||||||||||||||| |||||||||| ||||||||||| ||||||||    
T  52983614 acccatttggggttggcctagtggttggcttgagatcttggagtttgctcctccagaggtctcaggttcgattccctctggtgccaatttcagtgggcta 52983713  T
Q  125 agtccatacagatcttgctctggcttt 151  Q
    |||||||||||| ||||||||||||||    
T  52983714 agtccatacagagcttgctctggcttt 52983740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 80; E-Value: 7e-38
Query Start/End: Original strand, 49 - 151
Target Start/End: Complemental strand, 20078163 - 20078060
Alignment:
Q  49 gttgacttgggatcttggagtttgttcctccagaggtctcaggtttgattccctct-gtgccaatttcggtgggctaagtccatacagatcttgctctgg 147  Q
    |||| ||||||||||||||||||| |||||||||||||||||||||||||||| || |||||||||||||||||||||||||||||||| ||||||||||    
T  20078163 gttggcttgggatcttggagtttgctcctccagaggtctcaggtttgattcccactggtgccaatttcggtgggctaagtccatacagagcttgctctgg 20078064  T
Q  148 cttt 151  Q
    ||||    
T  20078063 cttt 20078060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 79; E-Value: 3e-37
Query Start/End: Original strand, 27 - 151
Target Start/End: Complemental strand, 34844960 - 34844834
Alignment:
Q  27 acccatttggg-ttggtctagtggttgacttgggatcttggagtttgttcctccagaggtctcaggtttgattccctctg-tgccaatttcggtgggcta 124  Q
    ||||||||||| |||| |||||||||  |||| |||||||||||||| |||||||||||||||||||| ||||| ||||| |||||||||||||||||||    
T  34844960 acccatttggggttggcctagtggtttgcttgagatcttggagtttgctcctccagaggtctcaggttcgattctctctggtgccaatttcggtgggcta 34844861  T
Q  125 agtccatacagatcttgctctggcttt 151  Q
    |||||||||||| ||||||||||||||    
T  34844860 agtccatacagagcttgctctggcttt 34844834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 79; E-Value: 3e-37
Query Start/End: Original strand, 27 - 151
Target Start/End: Complemental strand, 54127544 - 54127418
Alignment:
Q  27 acccatttggg-ttggtctagtggttgacttgggatcttggagtttgttcctccagaggtctcaggtttgattccctc-tgtgccaatttcggtgggcta 124  Q
    ||||||||||| |||| |||||||||| ||||||||||||||||||| ||||||| ||||||||||||  |||||||| |||||||||||||||||||||    
T  54127544 acccatttggggttggcctagtggttggcttgggatcttggagtttgctcctccaaaggtctcaggttcaattccctcttgtgccaatttcggtgggcta 54127445  T
Q  125 agtccatacagatcttgctctggcttt 151  Q
    |||| ||||||| ||||||||||||||    
T  54127444 agtctatacagagcttgctctggcttt 54127418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 76; E-Value: 2e-35
Query Start/End: Original strand, 27 - 144
Target Start/End: Complemental strand, 22625272 - 22625153
Alignment:
Q  27 acccatttg-ggttggtctagtggttgacttgggatcttggagtttgttcctccagaggtctcaggtttgattccctct-gtgccaatttcggtgggcta 124  Q
    ||||||||| |||||| |||||||||| ||||||||||||||||||  |||||||||||||||||||| |||||||||| | ||||||||||||||||||    
T  22625272 acccatttgaggttggcctagtggttggcttgggatcttggagtttactcctccagaggtctcaggttcgattccctctggagccaatttcggtgggcta 22625173  T
Q  125 agtccatacagatcttgctc 144  Q
    |||||||||||| |||||||    
T  22625172 agtccatacagagcttgctc 22625153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 75; E-Value: 7e-35
Query Start/End: Original strand, 27 - 151
Target Start/End: Complemental strand, 5609404 - 5609278
Alignment:
Q  27 acccatttggg-ttggtctagtggttgacttgggatcttggagtttgttcctccagaggtctcaggtttgattccctctg-tgccaatttcggtgggcta 124  Q
    ||||||||||| |||| |||||||||| ||||||||||||||||||| || | ||| ||||||||||| ||||| ||||| |||||||||||||||||||    
T  5609404 acccatttggggttggcctagtggttggcttgggatcttggagtttgctcattcagtggtctcaggttcgattctctctggtgccaatttcggtgggcta 5609305  T
Q  125 agtccatacagatcttgctctggcttt 151  Q
    |||||||||||| ||||||||||||||    
T  5609304 agtccatacagagcttgctctggcttt 5609278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 75; E-Value: 7e-35
Query Start/End: Original strand, 35 - 151
Target Start/End: Original strand, 20566353 - 20566471
Alignment:
Q  35 gggttggtctagtggttgacttgggatcttggagtttgttcctccagaggt-ctcaggtttgattccctct-gtgccaatttcggtgggctaagtccata 132  Q
    ||||||| |||||||||| ||||||||||||||||||| ||||||||||||  ||||||| |||||||||| |||||||||||||||||| |||||||||    
T  20566353 gggttggcctagtggttggcttgggatcttggagtttgctcctccagaggtgatcaggttcgattccctctggtgccaatttcggtgggcaaagtccata 20566452  T
Q  133 cagatcttgctctggcttt 151  Q
    |||| ||||||||||||||    
T  20566453 cagagcttgctctggcttt 20566471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 72; E-Value: 4e-33
Query Start/End: Original strand, 27 - 151
Target Start/End: Original strand, 46714387 - 46714514
Alignment:
Q  27 acccatttggg-ttggtctagtggttgacttgggatcttggagtttgttcctccagaggtctcaggtttga-ttccctct-gtgccaatttcggtgggct 123  Q
    ||||||||||| |||| |||||||||| ||||||||||||||||||| |||||||||||||||||||| || |||||| | |||||||||||||||||||    
T  46714387 acccatttggggttggcctagtggttggcttgggatcttggagtttgctcctccagaggtctcaggttcgatttccctttggtgccaatttcggtgggct 46714486  T
Q  124 aagtccatacagatcttgctctggcttt 151  Q
    ||||||||||||| ||||| || |||||    
T  46714487 aagtccatacagagcttgcccttgcttt 46714514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 71; E-Value: 2e-32
Query Start/End: Original strand, 27 - 151
Target Start/End: Original strand, 33992621 - 33992747
Alignment:
Q  27 acccattt-gggttggtctagtggttgacttgggatcttggagtttgttcctccagaggtctcaggtttgattccctct-gtgccaatttcggtgggcta 124  Q
    |||||||| ||||||  ||||||||||  |||||||||||||||||| |||||||||||||| ||||| ||||| |||| ||||||||||||||||||||    
T  33992621 acccatttagggttgacctagtggttggtttgggatcttggagtttgctcctccagaggtcttaggttcgattctctctggtgccaatttcggtgggcta 33992720  T
Q  125 agtccatacagatcttgctctggcttt 151  Q
    |||||||||| | ||||||||||||||    
T  33992721 agtccatacatagcttgctctggcttt 33992747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 70; E-Value: 7e-32
Query Start/End: Original strand, 35 - 151
Target Start/End: Original strand, 32942374 - 32942491
Alignment:
Q  35 gggttggtctagtggttgacttgggatcttggagtttgttcctccagaggtctcaggtttgattccctctg-tgccaatttcggtgggctaagtccatac 133  Q
    |||||||||||||||||| |||| |||||||||||||  |||||||||||| | ||||| ||||| ||||| ||||||||||||||||||||||||||||    
T  32942374 gggttggtctagtggttggcttgagatcttggagtttactcctccagaggtttaaggttcgattctctctgatgccaatttcggtgggctaagtccatac 32942473  T
Q  134 agatcttgctctggcttt 151  Q
    ||| ||| ||||||||||    
T  32942474 agagcttactctggcttt 32942491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 70; E-Value: 7e-32
Query Start/End: Original strand, 35 - 151
Target Start/End: Complemental strand, 45787896 - 45787780
Alignment:
Q  35 gggttggtctagtggttgacttgggatcttggagtttgttcctccagaggtctcaggtttgattccctctg-tgccaatttcggtgggctaagtccatac 133  Q
    ||||||| |||||||||| ||||| |||||||| |||| |||||||||| ||||||||| ||||||||||| |||||||||| |||||||||||||||||    
T  45787896 gggttggcctagtggttggcttggaatcttgga-tttgctcctccagagatctcaggttcgattccctctgatgccaatttcagtgggctaagtccatac 45787798  T
Q  134 agatcttgctctggcttt 151  Q
    ||| ||||||||||||||    
T  45787797 agagcttgctctggcttt 45787780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 68; E-Value: 1e-30
Query Start/End: Original strand, 27 - 136
Target Start/End: Original strand, 1985831 - 1985942
Alignment:
Q  27 acccatttggg-ttggtctagtggttgacttgggatcttggagtttgttcctccagaggtctcaggtttgattccctct-gtgccaatttcggtgggcta 124  Q
    ||||||||||| |||| |||||||||| ||||||||||||||||||| |||||||||||||||||||| |||||||| | |||| ||||||| |||||||    
T  1985831 acccatttgggattggcctagtggttggcttgggatcttggagtttgctcctccagaggtctcaggttcgattccctttggtgcgaatttcgatgggcta 1985930  T
Q  125 agtccatacaga 136  Q
    ||||||||||||    
T  1985931 agtccatacaga 1985942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 67; E-Value: 4e-30
Query Start/End: Original strand, 27 - 151
Target Start/End: Complemental strand, 35674943 - 35674817
Alignment:
Q  27 acccatttggg-ttggtctagtggttgacttgggatcttggagtttgttcctccagaggtctcaggtttgattccctct-gtgccaatttcggtgggcta 124  Q
    ||||||||||| |||| | |||||||| ||||||||||||||||||| || |||| ||||| |||||| |||||||||| | ||||||||||||||||||    
T  35674943 acccatttggggttggccaagtggttggcttgggatcttggagtttgctcttccaaaggtcacaggttcgattccctctggagccaatttcggtgggcta 35674844  T
Q  125 agtccatacagatcttgctctggcttt 151  Q
    |||||||||||| ||||||||| ||||    
T  35674843 agtccatacagagcttgctctgccttt 35674817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 65; E-Value: 6e-29
Query Start/End: Original strand, 36 - 151
Target Start/End: Original strand, 13550213 - 13550329
Alignment:
Q  36 ggttggtctagtggttgacttgggatcttggagtttgttcctccagaggtctcaggtttgattccctct-gtgccaatttcggtgggctaagtccataca 134  Q
    |||||| ||||||||||||||| ||||| |||||||| ||||| ||||||||||||  | ||||||||| |||||||||||||||||||||||||||||     
T  13550213 ggttggcctagtggttgacttgagatctgggagtttgctcctctagaggtctcaggcctaattccctctagtgccaatttcggtgggctaagtccatacc 13550312  T
Q  135 gatcttgctctggcttt 151  Q
    || ||| ||||||||||    
T  13550313 gagcttactctggcttt 13550329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 64; E-Value: 3e-28
Query Start/End: Original strand, 45 - 151
Target Start/End: Original strand, 49287872 - 49287979
Alignment:
Q  45 agtggttgacttgggatcttggagtttgttcctccagaggtctcaggtttgattccctct-gtgccaatttcggtgggctaagtccatacagatcttgct 143  Q
    ||||||||  |||||||||||||||||| |||||||||||||||||||| ||||| |||| |||||||||||||||||||||||||||||| |  |||||    
T  49287872 agtggttggtttgggatcttggagtttgctcctccagaggtctcaggttcgattctctctggtgccaatttcggtgggctaagtccatacaaaatttgct 49287971  T
Q  144 ctggcttt 151  Q
     |||||||    
T  49287972 atggcttt 49287979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 64; E-Value: 3e-28
Query Start/End: Original strand, 35 - 142
Target Start/End: Original strand, 51535617 - 51535729
Alignment:
Q  35 gggttggtctagtggttgacttgggatcttggagtttgttcctccagaggtctcaggtttgattccctctg-tgccaatttcggtgggctaa----gtcc 129  Q
    ||||||| |||||||||||||||||||||||||||||| ||||||| |||||||||||| ||||||||||| ||||||||| ||||||||||    ||||    
T  51535617 gggttggcctagtggttgacttgggatcttggagtttgctcctccacaggtctcaggttcgattccctctggtgccaattttggtgggctaattaagtcc 51535716  T
Q  130 atacagatcttgc 142  Q
    ||||||| |||||    
T  51535717 atacagagcttgc 51535729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 63; E-Value: 1e-27
Query Start/End: Original strand, 26 - 150
Target Start/End: Complemental strand, 13873498 - 13873372
Alignment:
Q  26 tacccatttggg-ttggtctagtggttgacttgggatcttggagtttgttcctccagaggtctcaggtttgattccctct-gtgccaatttcggtgggct 123  Q
    |||||||||||| |||| |||||||||  ||||||||||||||||||| |||| || |||||||||||| |||||||||| |||||||||||||| ||||    
T  13873498 tacccatttggggttggcctagtggtttgcttgggatcttggagtttgctccttcaaaggtctcaggttcgattccctctggtgccaatttcggtaggct 13873399  T
Q  124 aagtccatacagatcttgctctggctt 150  Q
    |||| ||||||||  ||||||| ||||    
T  13873398 aagttcatacagagtttgctctagctt 13873372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 63; E-Value: 1e-27
Query Start/End: Original strand, 35 - 136
Target Start/End: Complemental strand, 43719258 - 43719156
Alignment:
Q  35 gggttggtctagtggttgacttgggatcttggagtttgttcctccagaggtctcaggtttgattccctct-gtgccaatttcggtgggctaagtccatac 133  Q
    ||||||||||||||||||  ||| |||||||||||||| |||||||||||| ||||||| ||||| |||| |||| ||||||||||||||||||||||||    
T  43719258 gggttggtctagtggttggtttgagatcttggagtttgctcctccagaggtttcaggttcgattctctctagtgctaatttcggtgggctaagtccatac 43719159  T
Q  134 aga 136  Q
    |||    
T  43719158 aga 43719156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 62; E-Value: 4e-27
Query Start/End: Original strand, 55 - 151
Target Start/End: Complemental strand, 12500231 - 12500134
Alignment:
Q  55 ttgggatcttggagtttgttcctccagaggtctcaggtttgattccctct-gtgccaatttcggtgggctaagtccatacagatcttgctctggcttt 151  Q
    |||||||||||||||||| |||| || ||||||||||||||||||||||| |||||||||||  ||||||||||||||||| | ||||||||||||||    
T  12500231 ttgggatcttggagtttgctccttcaaaggtctcaggtttgattccctctggtgccaatttcaatgggctaagtccatacatagcttgctctggcttt 12500134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 59; E-Value: 2e-25
Query Start/End: Original strand, 27 - 143
Target Start/End: Complemental strand, 36131712 - 36131594
Alignment:
Q  27 acccatttggg-ttggtctagtggttgacttgggatcttggagtttgttcctccagaggtctcaggtttgattccctct-gtgccaatttcggtgggcta 124  Q
    ||||||||||| ||||  ||||||||  |||||||| |||||||| ||||||||||| |||||||||| |||||||| | |||||||||||||||| |||    
T  36131712 acccatttggggttggcatagtggtttgcttgggattttggagttcgttcctccagatgtctcaggttcgattccctatggtgccaatttcggtggccta 36131613  T
Q  125 agtccatacagatcttgct 143  Q
    |||||||||||| ||||||    
T  36131612 agtccatacagagcttgct 36131594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 57; E-Value: 4e-24
Query Start/End: Original strand, 48 - 151
Target Start/End: Complemental strand, 7392143 - 7392040
Alignment:
Q  48 ggttgacttgggatcttggagtttgttcctccagaggtctcaggtttgattccctct-gtgccaatttcggtgggctaagtccatacagatcttgctctg 146  Q
    ||||| ||||||||||||||||||| ||||||| |||||||||||| |||||||| | |||||||||||||| || ||||||||||||||  ||||||||    
T  7392143 ggttggcttgggatcttggagtttgctcctccaaaggtctcaggttcgattccctatggtgccaatttcggt-ggttaagtccatacagagtttgctctg 7392045  T
Q  147 gcttt 151  Q
    |||||    
T  7392044 gcttt 7392040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 57; E-Value: 4e-24
Query Start/End: Original strand, 44 - 151
Target Start/End: Complemental strand, 18875700 - 18875592
Alignment:
Q  44 tagtggttgacttgggatcttggagtttgttcctccagaggtctcaggtttgattccctctg-tgccaatttcggtgggctaagtccatacagatcttgc 142  Q
    |||||||||  ||||||| || ||||||||| || || || ||||||||| ||||||||||| || |||||||||||||||||||||||||||| |||||    
T  18875700 tagtggttggtttgggattttagagtttgtttcttcaaagatctcaggttcgattccctctgatgtcaatttcggtgggctaagtccatacagagcttgc 18875601  T
Q  143 tctggcttt 151  Q
    |||||||||    
T  18875600 tctggcttt 18875592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 63 - 141
Target Start/End: Complemental strand, 20527198 - 20527119
Alignment:
Q  63 ttggagtttgttcctccagaggtctcaggtttgattccctct-gtgccaatttcggtgggctaagtccatacagatcttg 141  Q
    ||||||||||||||||||||||||||| |||||||||||||| | |||||||||||||||||||||||||| ||| ||||    
T  20527198 ttggagtttgttcctccagaggtctcaagtttgattccctctggcgccaatttcggtgggctaagtccatatagagcttg 20527119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 35 - 133
Target Start/End: Original strand, 34835533 - 34835632
Alignment:
Q  35 gggttggtctagtggttgacttgggatcttggagtttgttcctccagaggtctcaggtttgattccctct-gtgccaatttcggtgggctaagtccatac 133  Q
    |||||||||||||||||| ||||||||||| ||||||| |||||   |||||||| ||| |||||||||| ||| |||||||||||||||||||||||||    
T  34835533 gggttggtctagtggttggcttgggatcttagagtttgctcctcttaaggtctcatgttcgattccctctggtgtcaatttcggtgggctaagtccatac 34835632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 55; E-Value: 6e-23
Query Start/End: Original strand, 38 - 151
Target Start/End: Original strand, 2351020 - 2351134
Alignment:
Q  38 ttggtctagtggttgacttgggatcttggagtttgttcctccagaggtctcaggtttgattccctct-gtgccaatttcggtgggctaagtccatacaga 136  Q
    |||| |||||||||| ||||| |||||| |||||| |||||||||||||||||||| |||||||||| |||||||||||||| | |||| |||||||| |    
T  2351020 ttggcctagtggttggcttggaatcttgaagtttgctcctccagaggtctcaggttcgattccctctggtgccaatttcggtcgactaaatccatacata 2351119  T
Q  137 tcttgctctggcttt 151  Q
     |||| || ||||||    
T  2351120 gcttgttccggcttt 2351134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 55; E-Value: 6e-23
Query Start/End: Original strand, 35 - 151
Target Start/End: Original strand, 44343517 - 44343635
Alignment:
Q  35 gggttggtctagtggtt-gacttgggatcttggagtttgttcctccagaggtctcaggtttgattccctctg-tgccaatttcggtgggctaagtccata 132  Q
    ||||||| ||||||||| | ||||||||||||||||||| ||| ||| ||| |||| ||| ||||||||||| ||| ||||| |||||||||||||||||    
T  44343517 gggttgggctagtggtttggcttgggatcttggagtttgctcccccaaaggactcaagttcgattccctctggtgctaattttggtgggctaagtccata 44343616  T
Q  133 cagatcttgctctggcttt 151  Q
    |||| ||||||||| ||||    
T  44343617 cagagcttgctctgacttt 44343635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 53; E-Value: 9e-22
Query Start/End: Original strand, 36 - 151
Target Start/End: Complemental strand, 13584446 - 13584330
Alignment:
Q  36 ggttggtctagtggttgacttgggatcttggagtttgttcctccagaggtctcaggtttgattccctctg-tgccaatttcggtgggctaagtccataca 134  Q
    |||||| |||||||||| | || ||| |||||||||| ||||||| | |||||| ||| ||||||||||| || |||||||| ||||||||||||||| |    
T  13584446 ggttggcctagtggttggcctgagatattggagtttgctcctccaaaagtctcaagttcgattccctctggtgtcaatttcgatgggctaagtccataga 13584347  T
Q  135 gatcttgctctggcttt 151  Q
    || ||||||||||||||    
T  13584346 gagcttgctctggcttt 13584330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 49; E-Value: 2e-19
Query Start/End: Original strand, 84 - 151
Target Start/End: Original strand, 32990488 - 32990556
Alignment:
Q  84 gtctcaggtttgattccctct-gtgccaatttcggtgggctaagtccatacagatcttgctctggcttt 151  Q
    |||||||||| |||||||| | |||||||||||||||||||||||||||||||| ||||||||||||||    
T  32990488 gtctcaggttcgattccctttagtgccaatttcggtgggctaagtccatacagagcttgctctggcttt 32990556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 49; E-Value: 2e-19
Query Start/End: Original strand, 80 - 151
Target Start/End: Original strand, 34723848 - 34723920
Alignment:
Q  80 agaggtctcaggtttgattccctctg-tgccaatttcggtgggctaagtccatacagatcttgctctggcttt 151  Q
    ||||| |||||||| ||||||||||| ||||||||||||||||||||||||||||| | ||||||||||||||    
T  34723848 agaggcctcaggttcgattccctctggtgccaatttcggtgggctaagtccatacaaagcttgctctggcttt 34723920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 45; E-Value: 6e-17
Query Start/End: Original strand, 38 - 151
Target Start/End: Complemental strand, 55961932 - 55961829
Alignment:
Q  38 ttggtctagtggttgacttgggatcttggagtttgttcctccagaggtctcaggtttgattccctctg-tgccaatttcggtgggctaagtccatacaga 136  Q
    |||| |||||||||| ||||||||||||||||||| ||||||||||||||            |||||| |||||||||||||||||||||||||||||||    
T  55961932 ttggcctagtggttggcttgggatcttggagtttgctcctccagaggtctt-----------cctctggtgccaatttcggtgggctaagtccatacaga 55961844  T
Q  137 tcttgctctggcttt 151  Q
     ||||||||| ||||    
T  55961843 gcttgctctgacttt 55961829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 43; E-Value: 9e-16
Query Start/End: Original strand, 82 - 151
Target Start/End: Complemental strand, 9517787 - 9517717
Alignment:
Q  82 aggtctcaggtttgattccctctg-tgccaatttcggtgggctaagtccatacagatcttgctctggcttt 151  Q
    |||||||||||| ||||| ||||| |||||||||| |||||||||||||||||||| ||||||||| ||||    
T  9517787 aggtctcaggttcgattctctctggtgccaatttcagtgggctaagtccatacagagcttgctctgacttt 9517717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 43; E-Value: 9e-16
Query Start/End: Original strand, 74 - 151
Target Start/End: Complemental strand, 21387639 - 21387561
Alignment:
Q  74 tcctccagaggtctcaggtttgattccctct-gtgccaatttcggtgggctaagtccatacagatcttgctctggcttt 151  Q
    |||||||||| ||||||||| |||||||| | ||| |||||| ||||||||||||| ||||||| ||||||||||||||    
T  21387639 tcctccagagatctcaggttcgattccctatagtgtcaattttggtgggctaagtctatacagagcttgctctggcttt 21387561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 42; E-Value: 0.000000000000003
Query Start/End: Original strand, 35 - 104
Target Start/End: Original strand, 42245750 - 42245819
Alignment:
Q  35 gggttggtctagtggttgacttgggatcttggagtttgttcctccagaggtctcaggtttgattccctct 104  Q
    ||||||| |||||||||||||||||||||| ||||||| ||||| | ||||||| |||| ||||||||||    
T  42245750 gggttggcctagtggttgacttgggatcttagagtttgctcctctaaaggtctcgggttcgattccctct 42245819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 40; E-Value: 0.00000000000005
Query Start/End: Original strand, 27 - 136
Target Start/End: Complemental strand, 41621798 - 41621688
Alignment:
Q  27 acccatttggg-ttggtctagtggttgacttgggatcttggagtttgttcctccagaggtctcaggtttgattccctct-gtgccaatttcggtgggcta 124  Q
    ||||||||||| |||| ||| |||||| |||| |||||||||||||| |||||   |||||||| |||||||| ||||| |||||||||| ||||||| |    
T  41621798 acccatttggggttggcctaatggttggcttgagatcttggagtttgctcctctcaaggtctcatgtttgatttcctctggtgccaattttggtgggc-a 41621700  T
Q  125 agtccatacaga 136  Q
    | ||||||||||    
T  41621699 aatccatacaga 41621688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 38; E-Value: 0.0000000000008
Query Start/End: Original strand, 35 - 151
Target Start/End: Complemental strand, 25969696 - 25969577
Alignment:
Q  35 gggttggtctagtggttgacttggg-atcttggagtttgttcctccagaggtctcag--gtttgattccctctg-tgccaatttcggtgggctaagtcca 130  Q
    ||||||| ||| ||||||| ||||| ||||||||||||| |||||   ||||| |||  ||| ||||||| ||| ||||||||||||||| | |||||||    
T  25969696 gggttggcctactggttgatttggggatcttggagtttgctcctctcaaggtcccagaggttggattccccctggtgccaatttcggtggcc-aagtcca 25969598  T
Q  131 tacagatcttgctctggcttt 151  Q
    |||||| ||||||||||||||    
T  25969597 tacagaacttgctctggcttt 25969577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 38; E-Value: 0.0000000000008
Query Start/End: Original strand, 55 - 151
Target Start/End: Complemental strand, 30879338 - 30879241
Alignment:
Q  55 ttgggatcttggagtttgttcctccagaggtctcaggtttgattccctctg-tgccaatttcggtgggctaagtccatacagatcttgctctggcttt 151  Q
    ||||||||||| |||||| |||| ||  ||| | ||||||||||||||||| ||||||||||| |||| ||| |||||||| |  |||||||||||||    
T  30879338 ttgggatcttgtagtttgctccttcatgggttttaggtttgattccctctggtgccaatttcgatgggttaaatccatacaaagtttgctctggcttt 30879241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 37; E-Value: 0.000000000003
Query Start/End: Original strand, 27 - 133
Target Start/End: Complemental strand, 13771685 - 13771577
Alignment:
Q  27 acccatttggg-ttggtctagtggttgacttgggatcttggagtttgttcctccagaggtctcaggtttgattccctctg-tgccaatttcggtgggcta 124  Q
    ||||||||||| |||||||  |||||| |||||||||||| |||||| || ||   ||||||||  || ||||||||||| || |||| |||||||||||    
T  13771685 acccatttggggttggtctgatggttggcttgggatcttgaagtttgctcatctcaaggtctcaaattcgattccctctgatgtcaatctcggtgggcta 13771586  T
Q  125 agtccatac 133  Q
    |||||||||    
T  13771585 agtccatac 13771577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 35; E-Value: 0.00000000005
Query Start/End: Original strand, 37 - 75
Target Start/End: Original strand, 10125788 - 10125826
Alignment:
Q  37 gttggtctagtggttgacttgggatcttggagtttgttc 75  Q
    ||||| |||||||||||||||||||||||||||||||||    
T  10125788 gttggcctagtggttgacttgggatcttggagtttgttc 10125826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 35; E-Value: 0.00000000005
Query Start/End: Original strand, 105 - 151
Target Start/End: Complemental strand, 29875897 - 29875851
Alignment:
Q  105 gtgccaatttcggtgggctaagtccatacagatcttgctctggcttt 151  Q
    |||||||||||||||||||||||||||||||| |||| |||| ||||    
T  29875897 gtgccaatttcggtgggctaagtccatacagagcttgttctgacttt 29875851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 33; E-Value: 0.0000000008
Query Start/End: Original strand, 35 - 83
Target Start/End: Original strand, 34722174 - 34722222
Alignment:
Q  35 gggttggtctagtggttgacttgggatcttggagtttgttcctccagag 83  Q
    |||||||  ||||||||| ||||||||||||||||||| ||||||||||    
T  34722174 gggttggcttagtggttggcttgggatcttggagtttgctcctccagag 34722222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 32; E-Value: 0.000000003
Query Start/End: Original strand, 38 - 69
Target Start/End: Original strand, 17415688 - 17415719
Alignment:
Q  38 ttggtctagtggttgacttgggatcttggagt 69  Q
    ||||||||||||||||||||||||||||||||    
T  17415688 ttggtctagtggttgacttgggatcttggagt 17415719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 32; E-Value: 0.000000003
Query Start/End: Original strand, 69 - 151
Target Start/End: Original strand, 27574356 - 27574439
Alignment:
Q  69 tttgttcctccagaggtctcaggtttgattccctctg-tgccaatttcggtgggctaagtccatacagatcttgctctggcttt 151  Q
    |||| ||||||| |||||||||||| ||||  ||||  | ||||||||||| |||||| | |||||||| ||||||||||||||    
T  27574356 tttgctcctccataggtctcaggttcgattttctcttattccaatttcggtaggctaaattcatacagagcttgctctggcttt 27574439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 30; E-Value: 0.00000005
Query Start/End: Original strand, 82 - 134
Target Start/End: Complemental strand, 22630332 - 22630280
Alignment:
Q  82 aggtctcaggtttgattccctct-gtgccaatttcggtgggctaagtccataca 134  Q
    |||||||||||| |||||||||| |||||||||| ||||||| |||||||||||    
T  22630332 aggtctcaggttcgattccctctggtgccaattttggtgggc-aagtccataca 22630280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 30; E-Value: 0.00000005
Query Start/End: Original strand, 109 - 150
Target Start/End: Original strand, 39288938 - 39288978
Alignment:
Q  109 caatttcggtgggctaagtccatacagatcttgctctggctt 150  Q
    |||||||||||||| ||||||||||||| |||||||||||||    
T  39288938 caatttcggtgggc-aagtccatacagagcttgctctggctt 39288978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 29; E-Value: 0.0000002
Query Start/End: Original strand, 47 - 122
Target Start/End: Original strand, 13017745 - 13017821
Alignment:
Q  47 tggttgacttgggatcttggagtttgttcctccagaggtctcaggtttgattccctctg-tgccaatttcggtgggc 122  Q
    |||||| ||||| |||||| ||| ||||||||   ||||||||||||  |||||||||| ||||||||| |||||||    
T  13017745 tggttggcttggaatcttgaagtgtgttcctctcaaggtctcaggttccattccctctgttgccaattttggtgggc 13017821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 29; E-Value: 0.0000002
Query Start/End: Original strand, 51 - 125
Target Start/End: Original strand, 28635723 - 28635799
Alignment:
Q  51 tgacttgggatcttggagtttgttcctcc-agaggtctcaggtttgattccctct-gtgccaatttcggtgggctaa 125  Q
    ||||||||||||| ||||| || ||||||  ||||||| ||||| ||||| |||| |||||||||| ||||||||||    
T  28635723 tgacttgggatctgggagtgtgctcctcctggaggtcttaggttcgattctctctggtgccaatttgggtgggctaa 28635799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 28; E-Value: 0.0000008
Query Start/End: Original strand, 27 - 121
Target Start/End: Complemental strand, 5795484 - 5795386
Alignment:
Q  27 acccatttgggttggtctagtggt--tgacttgggatcttggagtttgttcctccaga-ggtctcaggtttgattc-cctctgtgccaatttcggtggg 121  Q
    ||||| |||||||||||| |||||  |||||||| | |||||||| || ||||||  | ||||||||||||||||| || | |||||||||| ||||||    
T  5795484 acccacttgggttggtctggtggtgttgacttggcaccttggagtatgctcctcctcaaggtctcaggtttgattctccccagtgccaatttgggtggg 5795386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 28; E-Value: 0.0000008
Query Start/End: Original strand, 108 - 143
Target Start/End: Original strand, 33289145 - 33289180
Alignment:
Q  108 ccaatttcggtgggctaagtccatacagatcttgct 143  Q
    |||||||||||||| |||||||||||||| ||||||    
T  33289145 ccaatttcggtgggataagtccatacagagcttgct 33289180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0623 (Bit Score: 86; Significance: 2e-41; HSPs: 1)
Name: scaffold0623
Description:

Target: scaffold0623; HSP #1
Raw Score: 86; E-Value: 2e-41
Query Start/End: Original strand, 35 - 151
Target Start/End: Complemental strand, 1249 - 1132
Alignment:
Q  35 gggttggtctagtggttgacttgggatcttggagtttgttcctccagaggtctcaggtttgattccctct-gtgccaatttcggtgggctaagtccatac 133  Q
    ||||||| |||||||||| ||||||||||||||||||| |||||||||||||||||||| |||||||||| | |||||||||||||||||||||||||||    
T  1249 gggttggcctagtggttggcttgggatcttggagtttgctcctccagaggtctcaggttcgattccctctggagccaatttcggtgggctaagtccatac 1150  T
Q  134 agatcttgctctggcttt 151  Q
    ||| ||||||||||||||    
T  1149 agagcttgctctggcttt 1132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0366 (Bit Score: 86; Significance: 2e-41; HSPs: 2)
Name: scaffold0366
Description:

Target: scaffold0366; HSP #1
Raw Score: 86; E-Value: 2e-41
Query Start/End: Original strand, 35 - 151
Target Start/End: Complemental strand, 9492 - 9375
Alignment:
Q  35 gggttggtctagtggttgacttgggatcttggagtttgttcctccagaggtctcaggtttgattccctct-gtgccaatttcggtgggctaagtccatac 133  Q
    ||||||| |||||||||| ||||||||||||||||||| |||||||||||||||||||| |||||||||| | |||||||||||||||||||||||||||    
T  9492 gggttggcctagtggttggcttgggatcttggagtttgctcctccagaggtctcaggttcgattccctctggagccaatttcggtgggctaagtccatac 9393  T
Q  134 agatcttgctctggcttt 151  Q
    ||| ||||||||||||||    
T  9392 agagcttgctctggcttt 9375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0366; HSP #2
Raw Score: 82; E-Value: 5e-39
Query Start/End: Original strand, 35 - 151
Target Start/End: Complemental strand, 12193 - 12076
Alignment:
Q  35 gggttggtctagtggttgacttgggatcttggagtttgttcctccagaggtctcaggtttgattccctct-gtgccaatttcggtgggctaagtccatac 133  Q
    ||||||| |||||||||| ||||||||||||||||||| |||||||||||||||||||| |||| ||||| | |||||||||||||||||||||||||||    
T  12193 gggttggcctagtggttggcttgggatcttggagtttgctcctccagaggtctcaggttcgatttcctctggagccaatttcggtgggctaagtccatac 12094  T
Q  134 agatcttgctctggcttt 151  Q
    ||| ||||||||||||||    
T  12093 agagcttgctctggcttt 12076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0070 (Bit Score: 83; Significance: 1e-39; HSPs: 1)
Name: scaffold0070
Description:

Target: scaffold0070; HSP #1
Raw Score: 83; E-Value: 1e-39
Query Start/End: Original strand, 27 - 151
Target Start/End: Original strand, 40320 - 40446
Alignment:
Q  27 acccatttggg-ttggtctagtggttgacttgggatcttggagtttgttcctccagaggtctcaggtttgattccctct-gtgccaatttcggtgggcta 124  Q
    ||||||||||| |||| |||||||||| ||| ||||||||||||||| |||| ||||||||||||||| |||||||||| ||||||||||||||||||||    
T  40320 acccatttggggttggcctagtggttggcttaggatcttggagtttgctccttcagaggtctcaggttcgattccctctggtgccaatttcggtgggcta 40419  T
Q  125 agtccatacagatcttgctctggcttt 151  Q
    |||||||||||| ||||||||||||||    
T  40420 agtccatacagagcttgctctggcttt 40446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0068 (Bit Score: 83; Significance: 1e-39; HSPs: 1)
Name: scaffold0068
Description:

Target: scaffold0068; HSP #1
Raw Score: 83; E-Value: 1e-39
Query Start/End: Original strand, 27 - 151
Target Start/End: Complemental strand, 41846 - 41720
Alignment:
Q  27 acccatttggg-ttggtctagtggttgacttgggatcttggagtttgttcctccagaggtctcaggtttgattccctc-tgtgccaatttcggtgggcta 124  Q
    ||||||||||| |||| |||||||||||||||||||||||||||||| |||||||||||||||||||| ||||||||| ||| ||||||||| || ||||    
T  41846 acccatttggggttggcctagtggttgacttgggatcttggagtttgctcctccagaggtctcaggttcgattccctcttgttccaatttcgttgtgcta 41747  T
Q  125 agtccatacagatcttgctctggcttt 151  Q
    |||||||||||| ||||||||||||||    
T  41746 agtccatacagagcttgctctggcttt 41720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0459 (Bit Score: 82; Significance: 5e-39; HSPs: 1)
Name: scaffold0459
Description:

Target: scaffold0459; HSP #1
Raw Score: 82; E-Value: 5e-39
Query Start/End: Original strand, 35 - 151
Target Start/End: Complemental strand, 10886 - 10769
Alignment:
Q  35 gggttggtctagtggttgacttgggatcttggagtttgttcctccagaggtctcaggtttgattccctct-gtgccaatttcggtgggctaagtccatac 133  Q
    ||||||| |||||||||| ||||||||||||||||||| |||||||||||||||||||| |||| ||||| | |||||||||||||||||||||||||||    
T  10886 gggttggcctagtggttggcttgggatcttggagtttgctcctccagaggtctcaggttcgatttcctctggagccaatttcggtgggctaagtccatac 10787  T
Q  134 agatcttgctctggcttt 151  Q
    ||| ||||||||||||||    
T  10786 agagcttgctctggcttt 10769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026 (Bit Score: 79; Significance: 3e-37; HSPs: 1)
Name: scaffold0026
Description:

Target: scaffold0026; HSP #1
Raw Score: 79; E-Value: 3e-37
Query Start/End: Original strand, 27 - 151
Target Start/End: Complemental strand, 97568 - 97442
Alignment:
Q  27 acccatttggg-ttggtctagtggttgacttgggatcttggagtttgttcctccagaggtctcaggtttgattccctct-gtgccaatttcggtgggcta 124  Q
    ||||||||||| |||| |||||||||| |||||||||||| |||||| ||||||| |||||||||||| |||||||||| ||||||||||||||||||||    
T  97568 acccatttggggttggcctagtggttggcttgggatcttgtagtttgctcctccaaaggtctcaggttcgattccctctggtgccaatttcggtgggcta 97469  T
Q  125 agtccatacagatcttgctctggcttt 151  Q
    |||||||||||| ||||||||| ||||    
T  97468 agtccatacagagcttgctctgacttt 97442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0019 (Bit Score: 79; Significance: 3e-37; HSPs: 1)
Name: scaffold0019
Description:

Target: scaffold0019; HSP #1
Raw Score: 79; E-Value: 3e-37
Query Start/End: Original strand, 54 - 151
Target Start/End: Original strand, 161832 - 161930
Alignment:
Q  54 cttgggatcttggagtttgttcctccagaggtctcaggtttgattccctct-gtgccaatttcggtgggctaagtccatacagatcttgctctggcttt 151  Q
    ||||||||||||||||||| |||||||||||||||||||| |||||||||| |||||||||||||||||||||||||||||||| ||||||||||||||    
T  161832 cttgggatcttggagtttgctcctccagaggtctcaggttcgattccctctggtgccaatttcggtgggctaagtccatacagagcttgctctggcttt 161930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0051 (Bit Score: 76; Significance: 2e-35; HSPs: 1)
Name: scaffold0051
Description:

Target: scaffold0051; HSP #1
Raw Score: 76; E-Value: 2e-35
Query Start/End: Original strand, 26 - 151
Target Start/End: Complemental strand, 53074 - 52947
Alignment:
Q  26 tacccatttggg-ttggtctagtggttgacttgggatcttggagtttgttcctccagaggtctcaggtttgattccctct-gtgccaatttcggtgggct 123  Q
    |||||||||||| |||| |||||||||| ||||||||||||||||||| |||||||||||  ||||||| |||||||||| ||||||||||||||||||     
T  53074 tacccatttgggattggcctagtggttggcttgggatcttggagtttgctcctccagaggcttcaggttcgattccctctggtgccaatttcggtgggca 52975  T
Q  124 aagtccatacagatcttgctctggcttt 151  Q
    || |||||||||| ||||||||||||||    
T  52974 aaatccatacagagcttgctctggcttt 52947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0217 (Bit Score: 74; Significance: 3e-34; HSPs: 1)
Name: scaffold0217
Description:

Target: scaffold0217; HSP #1
Raw Score: 74; E-Value: 3e-34
Query Start/End: Original strand, 35 - 151
Target Start/End: Complemental strand, 7502 - 7385
Alignment:
Q  35 gggttggtctagtggttgacttgggatcttggagtttgttcctccagaggtctcaggtttgattccct-ctgtgccaatttcggtgggctaagtccatac 133  Q
    ||||||| ||||| |||| ||||||||||||||||||| |||||||||| ||||||||| |||||||| | |||||||||||||||||||||||||||||    
T  7502 gggttggcctagtagttggcttgggatcttggagtttgctcctccagagatctcaggttcgattccctccggtgccaatttcggtgggctaagtccatac 7403  T
Q  134 agatcttgctctggcttt 151  Q
    ||| ||| ||||||||||    
T  7402 agagctttctctggcttt 7385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0328 (Bit Score: 71; Significance: 2e-32; HSPs: 2)
Name: scaffold0328
Description:

Target: scaffold0328; HSP #1
Raw Score: 71; E-Value: 2e-32
Query Start/End: Original strand, 27 - 151
Target Start/End: Original strand, 14986 - 15112
Alignment:
Q  27 acccatttggg-ttggtctagtggttgacttgggatcttggagtttgttcctccagaggtctcaggtttgattccctct-gtgccaatttcggtgggcta 124  Q
    ||||||||||| |||| |||||||||| | ||||||||||||||||| ||||||||||||||||||||  ||||||||| |||| |||||||||||| ||    
T  14986 acccatttggggttggcctagtggttggcctgggatcttggagtttgctcctccagaggtctcaggttcaattccctctggtgctaatttcggtgggtta 15085  T
Q  125 agtccatacagatcttgctctggcttt 151  Q
    ||||||| |||| ||||||||||||||    
T  15086 agtccatccagagcttgctctggcttt 15112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0328; HSP #2
Raw Score: 35; E-Value: 0.00000000005
Query Start/End: Original strand, 90 - 143
Target Start/End: Complemental strand, 13182 - 13128
Alignment:
Q  90 ggtttgattccctctg-tgccaatttcggtgggctaagtccatacagatcttgct 143  Q
    |||| ||||||||||| |||||||||||||||| |||||||||||||| ||||||    
T  13182 ggttcgattccctctggtgccaatttcggtgggttaagtccatacagagcttgct 13128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0157 (Bit Score: 62; Significance: 4e-27; HSPs: 1)
Name: scaffold0157
Description:

Target: scaffold0157; HSP #1
Raw Score: 62; E-Value: 4e-27
Query Start/End: Original strand, 55 - 151
Target Start/End: Original strand, 20246 - 20343
Alignment:
Q  55 ttgggatcttggagtttgttcctccagaggtctcaggtttgattccctct-gtgccaatttcggtgggctaagtccatacagatcttgctctggcttt 151  Q
    |||||||||||||||||| |||| || ||||||||||||||||||||||| |||||||||||  ||||||||||||||||| | ||||||||||||||    
T  20246 ttgggatcttggagtttgctccttcaaaggtctcaggtttgattccctctggtgccaatttcaatgggctaagtccatacatagcttgctctggcttt 20343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0717 (Bit Score: 61; Significance: 2e-26; HSPs: 1)
Name: scaffold0717
Description:

Target: scaffold0717; HSP #1
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 36 - 151
Target Start/End: Complemental strand, 150 - 34
Alignment:
Q  36 ggttggtctagtggttgacttgggatcttggagtttgttcctccagaggtctcaggtttgattccctc-tgtgccaatttcggtgggctaagtccataca 134  Q
    |||||| |||||||||| |||| |||||||||||||| || ||||||||||||||||| ||||||||| | || |||||||| |||||||||||||||||    
T  150 ggttggcctagtggttggcttgtgatcttggagtttgctcgtccagaggtctcaggttcgattccctcttatgtcaatttcgatgggctaagtccataca 51  T
Q  135 gatcttgctctggcttt 151  Q
    ||  ||||||| |||||    
T  50 gagtttgctctagcttt 34  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0049 (Bit Score: 60; Significance: 6e-26; HSPs: 1)
Name: scaffold0049
Description:

Target: scaffold0049; HSP #1
Raw Score: 60; E-Value: 6e-26
Query Start/End: Original strand, 27 - 128
Target Start/End: Original strand, 66757 - 66860
Alignment:
Q  27 acccatttggg-ttggtctagtggttgacttgggatcttggagtttgttcctccagaggtctcaggtttgattccctct-gtgccaatttcggtgggcta 124  Q
    ||||||||||| ||||||||||||||| ||||||||||||||||||| ||||||| |||||||| ||| |||||| ||| |||||||||| |||||||||    
T  66757 acccatttgggattggtctagtggttggcttgggatcttggagtttgctcctccaaaggtctcacgttcgattccttctggtgccaattttggtgggcta 66856  T
Q  125 agtc 128  Q
    ||||    
T  66857 agtc 66860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0199 (Bit Score: 58; Significance: 1e-24; HSPs: 1)
Name: scaffold0199
Description:

Target: scaffold0199; HSP #1
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 27 - 122
Target Start/End: Complemental strand, 8609 - 8512
Alignment:
Q  27 acccatttggg-ttggtctagtggttgacttgggatcttggagtttgttcctccagaggtctcaggtttgattccctct-gtgccaatttcggtgggc 122  Q
    ||||||||||| |||| |||||||||| ||||||||||||||||||| |||||||||||||||||||| ||||  |||| ||||||||||||||||||    
T  8609 acccatttggggttggcctagtggttggcttgggatcttggagtttgctcctccagaggtctcaggttcgattatctctggtgccaatttcggtgggc 8512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0460 (Bit Score: 56; Significance: 2e-23; HSPs: 1)
Name: scaffold0460
Description:

Target: scaffold0460; HSP #1
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 27 - 120
Target Start/End: Complemental strand, 8381 - 8286
Alignment:
Q  27 acccatttggg-ttggtctagtggttgacttgggatcttggagtttgttcctccagaggtctcaggtttgattccctct-gtgccaatttcggtgg 120  Q
    ||||||||||| ||||| ||||||||| || |||||||||||||||| |||||||||||||||| ||| |||||||||| ||||||||||||||||    
T  8381 acccatttggggttggtttagtggttggctcgggatcttggagtttgctcctccagaggtctcaagttcgattccctctggtgccaatttcggtgg 8286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0102 (Bit Score: 51; Significance: 1e-20; HSPs: 1)
Name: scaffold0102
Description:

Target: scaffold0102; HSP #1
Raw Score: 51; E-Value: 1e-20
Query Start/End: Original strand, 74 - 151
Target Start/End: Original strand, 39135 - 39213
Alignment:
Q  74 tcctccagaggtctcaggtttgattccctctg-tgccaatttcggtgggctaagtccatacagatcttgctctggcttt 151  Q
    |||||||||||||||| ||| ||||||||||| ||||||||||||||||||| ||||||||||| |||| |||||||||    
T  39135 tcctccagaggtctcaagttcgattccctctggtgccaatttcggtgggctatgtccatacagaacttgttctggcttt 39213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028 (Bit Score: 45; Significance: 6e-17; HSPs: 1)
Name: scaffold0028
Description:

Target: scaffold0028; HSP #1
Raw Score: 45; E-Value: 6e-17
Query Start/End: Original strand, 27 - 133
Target Start/End: Original strand, 27771 - 27879
Alignment:
Q  27 acccatttggg-ttggtctagtggttgacttgggatcttggagtttgttcctccagaggtctcaggtttgattccctct-gtgccaatttcggtgggcta 124  Q
    ||||||||||| |||||||||||||||  ||||||| |||||||||| |||||   ||||||| |||| |||||||| | ||||||||||  ||||||||    
T  27771 acccatttggggttggtctagtggttggtttgggattttggagtttgctcctctcaaggtctcgggttcgattccctgtggtgccaatttgagtgggcta 27870  T
Q  125 agtccatac 133  Q
    |||||||||    
T  27871 agtccatac 27879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016 (Bit Score: 44; Significance: 2e-16; HSPs: 1)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 44; E-Value: 2e-16
Query Start/End: Original strand, 85 - 151
Target Start/End: Original strand, 32342 - 32409
Alignment:
Q  85 tctcaggtttgattccctctgt-gccaatttcggtgggctaagtccatacagatcttgctctggcttt 151  Q
    ||||||||| |||| ||||||  |||||||||||||||||||||||||||||| ||||||||||||||    
T  32342 tctcaggttcgatttcctctggagccaatttcggtgggctaagtccatacagagcttgctctggcttt 32409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0240 (Bit Score: 41; Significance: 0.00000000000001; HSPs: 1)
Name: scaffold0240
Description:

Target: scaffold0240; HSP #1
Raw Score: 41; E-Value: 0.00000000000001
Query Start/End: Original strand, 38 - 98
Target Start/End: Complemental strand, 12944 - 12884
Alignment:
Q  38 ttggtctagtggttgacttgggatcttggagtttgttcctccagaggtctcaggtttgatt 98  Q
    |||| |||||||||||||||||||||||||||| | |||||||||| ||||||||| ||||    
T  12944 ttggcctagtggttgacttgggatcttggagttcgctcctccagagatctcaggttcgatt 12884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0200 (Bit Score: 36; Significance: 0.00000000001; HSPs: 1)
Name: scaffold0200
Description:

Target: scaffold0200; HSP #1
Raw Score: 36; E-Value: 0.00000000001
Query Start/End: Original strand, 27 - 120
Target Start/End: Complemental strand, 26745 - 26650
Alignment:
Q  27 acccatttggg-ttggtctagtggttgacttgggatcttggagtttgttcctccagaggtctcaggtttgattccctc-tgtgccaatttcggtgg 120  Q
    ||||||||||| |||| ||| |||||| ||| ||||||||||||||| |  || |||||||||| ||||||||| ||| | |||||||||||||||    
T  26745 acccatttggggttggcctactggttggcttaggatcttggagtttgcttttcaagaggtctcatgtttgattctctcttatgccaatttcggtgg 26650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1175 (Bit Score: 30; Significance: 0.00000005; HSPs: 1)
Name: scaffold1175
Description:

Target: scaffold1175; HSP #1
Raw Score: 30; E-Value: 0.00000005
Query Start/End: Original strand, 118 - 151
Target Start/End: Complemental strand, 2535 - 2502
Alignment:
Q  118 tgggctaagtccatacagatcttgctctggcttt 151  Q
    ||||||||||||||||||| ||||||||||||||    
T  2535 tgggctaagtccatacagagcttgctctggcttt 2502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0258 (Bit Score: 28; Significance: 0.0000008; HSPs: 1)
Name: scaffold0258
Description:

Target: scaffold0258; HSP #1
Raw Score: 28; E-Value: 0.0000008
Query Start/End: Original strand, 27 - 125
Target Start/End: Complemental strand, 15398 - 15296
Alignment:
Q  27 acccatttgggttggtctagtgg--ttgacttgggatcttggagtttgttcctcc-agaggtctcaggtttgattccctctg-tgccaatttcggtgggc 122  Q
    ||||| |||||||||||| ||||  ||| ||||||| || ||||| || ||||||  ||||||||||||| ||||| ||| | ||||||||| |||||||    
T  15398 acccacttgggttggtctggtggtattggcttgggacctgggagtgtgctcctcctcgaggtctcaggttcgattctctcggatgccaatttaggtgggc 15299  T
Q  123 taa 125  Q
    |||    
T  15298 taa 15296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



© Oklahoma State University