View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: Solexa-NF5886-22 (Length: 143)
Name: Solexa-NF5886-22
Description: NF5886
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] Solexa-NF5886-22 |
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| [»] chr2 (1 HSPs) |
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Alignment Details
Target: chr2 (Bit Score: 139; Significance: 4e-73; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 139; E-Value: 4e-73
Query Start/End: Original strand, 1 - 143
Target Start/End: Complemental strand, 38264710 - 38264568
Alignment:
| Q |
1 |
agcacagaagtctggttgtcgatcgtagactcgtgcgatccaatgatctaactcataatcttgactgccttgctgccaagtgataatacattgttcacca |
100 |
Q |
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| T |
38264710 |
agcacagaagtctggttgtcgatcgtagactcgtgcgatccaatgatctaactcataatcttgaccgccttgctgccaagtgataatacattgttcacca |
38264611 |
T |
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| Q |
101 |
cccatttaatttaatcgtatatgtgagccttcctatgtggtca |
143 |
Q |
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||||||||||||||||||||||||||||||||||||||||||| |
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| T |
38264610 |
cccatttaatttaatcgtatatgtgagccttcctatgtggtca |
38264568 |
T |
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