View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: Solexa-NF5886-62 (Length: 111)
Name: Solexa-NF5886-62
Description: NF5886
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] Solexa-NF5886-62 |
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| [»] chr3 (1 HSPs) |
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Alignment Details
Target: chr3 (Bit Score: 89; Significance: 2e-43; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 89; E-Value: 2e-43
Query Start/End: Original strand, 7 - 111
Target Start/End: Complemental strand, 38713251 - 38713147
Alignment:
| Q |
7 |
aagtcagaagggctttaaatattaaaaatagaaacgataaggtgtttaagggcgtggattgtctcgcgggagaaaaggtgagagattttcactggagaga |
106 |
Q |
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| T |
38713251 |
aagtcagaagggctttgaatattaaaaatagaaacgataaggtgtttaagggcgtggattgtctctcgggagaaaaggtgagagattttcaccgcagaga |
38713152 |
T |
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| Q |
107 |
atcca |
111 |
Q |
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||||| |
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| T |
38713151 |
atcca |
38713147 |
T |
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