View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: Solexa-NF5886-7 (Length: 224)
Name: Solexa-NF5886-7
Description: NF5886
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] Solexa-NF5886-7 |
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Alignment Details
Target: chr7 (Bit Score: 195; Significance: 1e-106; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 195; E-Value: 1e-106
Query Start/End: Original strand, 8 - 202
Target Start/End: Complemental strand, 26941188 - 26940994
Alignment:
| Q |
8 |
ggaaggagtataatttgaattaaatgctatatatatttcatgaatttctgcttgatgtggggttggcaattgagaggccaagactaggacggttagaatc |
107 |
Q |
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| T |
26941188 |
ggaaggagtataatttgaattaaatgctatatatatttcatgaatttctgcttgatgtggggttggcaattgagaggccaagactaggacggttagaatc |
26941089 |
T |
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| Q |
108 |
caaaaattaagtaaattccgccagtccataatctgttgtatcttatacctgacgtgagagttgtaagtgacattcaggttcacgggaaagatact |
202 |
Q |
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| T |
26941088 |
caaaaattaagtaaattccgccagtccataatctgttgtatcttatacctgacgtgagagttgtaagtgacattcaggttcacgggaaagatact |
26940994 |
T |
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