View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: Solexa-NF5887-12 (Length: 144)
Name: Solexa-NF5887-12
Description: NF5887
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] Solexa-NF5887-12 |
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| [»] chr7 (1 HSPs) |
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Alignment Details
Target: chr7 (Bit Score: 119; Significance: 4e-61; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 119; E-Value: 4e-61
Query Start/End: Original strand, 1 - 144
Target Start/End: Original strand, 46413107 - 46413250
Alignment:
| Q |
1 |
gagcagagaatcccccactttctaaggcnnnnnnncttccacttcaagtgctgttttcctttgcttacttgctgcttagaacctcccattctcatcacgc |
100 |
Q |
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| T |
46413107 |
gagcagagaatcccccactttctaaggcaaaaaaacttccacttcaagtgctgttttcctttgcttacttgctgcttagaacctcccattctcctcacgc |
46413206 |
T |
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| Q |
101 |
tatctcctattactttcacatttttacacaactcttactccact |
144 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||| |
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| T |
46413207 |
tatctcctattactttcacatttttacacaactcttactccact |
46413250 |
T |
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