View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: Solexa-NF5887-3 (Length: 197)
Name: Solexa-NF5887-3
Description: NF5887
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] Solexa-NF5887-3 |
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Alignment Details
Target: chr8 (Bit Score: 108; Significance: 2e-54; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 108; E-Value: 2e-54
Query Start/End: Original strand, 1 - 112
Target Start/End: Original strand, 36161191 - 36161302
Alignment:
| Q |
1 |
gaagcaaaggcaggaaaaatgaatcataatcataagcctttgtttgaggccaataacaaaggtatggtactgatttaaagcattacagtcacaaaatcaa |
100 |
Q |
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| T |
36161191 |
gaagccaaggcaggaaaaatgaatcataatcataagcctttgtttgaggccaataacaaaggtatggtactgatttaaagcattacagtcacaaaatcaa |
36161290 |
T |
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| Q |
101 |
ctccttgtacat |
112 |
Q |
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|||||||||||| |
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| T |
36161291 |
ctccttgtacat |
36161302 |
T |
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