View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: Solexa-NF5887-35 (Length: 126)
Name: Solexa-NF5887-35
Description: NF5887
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] Solexa-NF5887-35 |
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| [»] chr7 (1 HSPs) |
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Alignment Details
Target: chr7 (Bit Score: 105; Significance: 7e-53; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 105; E-Value: 7e-53
Query Start/End: Original strand, 1 - 126
Target Start/End: Complemental strand, 32400558 - 32400433
Alignment:
| Q |
1 |
tgttatatcatcactcttggaggatccaaatcgcaagtttatctatgttgaaatggtaatcataatattaatcaaatgctactaaagttttcannnnnnn |
100 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
32400558 |
tgttatatcatcactcttggaggatccaaatcgcaagtttatctatgttgaaatggtaatcataatattaatcaaatgctactaaagttttcattttttt |
32400459 |
T |
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| Q |
101 |
gtaaatggcaagaactagaagtgttt |
126 |
Q |
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|||||||||||||||||||||||||| |
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| T |
32400458 |
gtaaatggcaagaactagaagtgttt |
32400433 |
T |
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