View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: Solexa-NF5888-4 (Length: 117)
Name: Solexa-NF5888-4
Description: NF5888
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] Solexa-NF5888-4 |
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| [»] chr8 (1 HSPs) |
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Alignment Details
Target: chr8 (Bit Score: 106; Significance: 2e-53; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 106; E-Value: 2e-53
Query Start/End: Original strand, 8 - 117
Target Start/End: Original strand, 40970336 - 40970445
Alignment:
| Q |
8 |
attgcaataagttggctaattcacgaccaattttacgttgttcgataattgggggaatgcgtggttcaagaaattgatgtaacagagtggagaagtgcaa |
107 |
Q |
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| T |
40970336 |
attgcaataagttggctaattcacgaccaattttacgttgttcgataattgggggaatgcgtggttcaagaaattgatgtaacagagtggagaagtgcaa |
40970435 |
T |
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| Q |
108 |
agtttggatc |
117 |
Q |
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||||||||| |
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| T |
40970436 |
cgtttggatc |
40970445 |
T |
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