View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: Tnk442-LTR4-TNT-insertion-3 (Length: 422)

Name: Tnk442-LTR4-TNT-insertion-3
Description: Tnk442-LTR4
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] Tnk442-LTR4-TNT-insertion-3
Tnk442-LTR4-TNT-insertion-3
[»] chr5 (36 HSPs)
chr5 (255-412)||(17266022-17266178)
chr5 (11-173)||(28422884-28423062)
chr5 (266-409)||(14883689-14883832)
chr5 (255-408)||(23562856-23563009)
chr5 (95-173)||(14691230-14691308)
chr5 (255-373)||(43123030-43123148)
chr5 (191-259)||(14680589-14680656)
chr5 (267-391)||(20345827-20345951)
chr5 (255-391)||(16257723-16257859)
chr5 (255-391)||(22591442-22591578)
chr5 (255-391)||(22594997-22595133)
chr5 (258-373)||(23670195-23670310)
chr5 (255-409)||(21869965-21870119)
chr5 (255-409)||(21874245-21874399)
chr5 (270-409)||(22465477-22465616)
chr5 (282-391)||(22506224-22506333)
chr5 (318-409)||(23077655-23077746)
chr5 (255-337)||(28891629-28891711)
chr5 (191-243)||(14683230-14683282)
chr5 (282-409)||(25851599-25851726)
chr5 (270-337)||(28911490-28911557)
chr5 (270-337)||(28926758-28926825)
chr5 (270-385)||(37288201-37288316)
chr5 (36-86)||(14691334-14691384)
chr5 (255-337)||(20770737-20770819)
chr5 (255-337)||(20779512-20779594)
chr5 (269-373)||(21560726-21560830)
chr5 (261-373)||(21982185-21982297)
chr5 (270-385)||(14996444-14996559)
chr5 (270-337)||(20825052-20825119)
chr5 (278-385)||(22138234-22138341)
chr5 (270-385)||(27682105-27682220)
chr5 (197-259)||(41688298-41688360)
chr5 (262-367)||(21631093-21631198)
chr5 (345-409)||(18782659-18782723)
chr5 (255-379)||(21410707-21410831)
[»] chr3 (34 HSPs)
chr3 (255-412)||(13945263-13945420)
chr3 (255-412)||(16831261-16831418)
chr3 (255-412)||(8744123-8744280)
chr3 (255-412)||(16384105-16384262)
chr3 (255-412)||(31942142-31942299)
chr3 (255-412)||(31691918-31692075)
chr3 (255-405)||(13317302-13317452)
chr3 (261-409)||(18131086-18131234)
chr3 (269-412)||(11957928-11958071)
chr3 (255-409)||(12181586-12181740)
chr3 (255-409)||(17494892-17495046)
chr3 (255-412)||(17189613-17189770)
chr3 (255-409)||(12357260-12357414)
chr3 (255-409)||(14290265-14290419)
chr3 (255-409)||(16825012-16825166)
chr3 (255-409)||(35983423-35983577)
chr3 (267-379)||(2245417-2245529)
chr3 (256-412)||(24190542-24190698)
chr3 (282-373)||(10409246-10409337)
chr3 (282-409)||(28757561-28757688)
chr3 (282-373)||(47127222-47127313)
chr3 (255-391)||(2036645-2036781)
chr3 (255-391)||(2040386-2040522)
chr3 (255-391)||(14040006-14040142)
chr3 (264-376)||(15230878-15230990)
chr3 (264-376)||(15236746-15236858)
chr3 (255-337)||(10416778-10416860)
chr3 (258-340)||(12857241-12857323)
chr3 (265-385)||(19728015-19728135)
chr3 (270-385)||(6597308-6597423)
chr3 (270-385)||(6603988-6604103)
chr3 (270-385)||(16695420-16695535)
chr3 (345-409)||(23414624-23414688)
chr3 (270-382)||(53381781-53381893)
[»] scaffold1914 (1 HSPs)
scaffold1914 (255-412)||(738-895)
[»] chr7 (27 HSPs)
chr7 (255-412)||(18050445-18050602)
chr7 (255-412)||(14145261-14145418)
chr7 (255-412)||(14282866-14283023)
chr7 (255-403)||(15099215-15099363)
chr7 (258-409)||(13024947-13025098)
chr7 (258-409)||(15810809-15810960)
chr7 (267-409)||(16946976-16947118)
chr7 (282-409)||(40924336-40924463)
chr7 (267-409)||(13965172-13965314)
chr7 (255-412)||(11384921-11385078)
chr7 (306-409)||(13677048-13677151)
chr7 (282-409)||(26115109-26115236)
chr7 (282-409)||(49155904-49156031)
chr7 (255-409)||(12797997-12798150)
chr7 (267-391)||(12460249-12460373)
chr7 (261-376)||(12203298-12203413)
chr7 (282-373)||(26091317-26091408)
chr7 (255-409)||(14260738-14260892)
chr7 (282-367)||(11877781-11877866)
chr7 (255-409)||(19150614-19150768)
chr7 (255-409)||(20750013-20750167)
chr7 (282-391)||(21756033-21756142)
chr7 (270-385)||(10874075-10874190)
chr7 (345-412)||(11984591-11984658)
chr7 (270-385)||(18181365-18181480)
chr7 (270-395)||(17702993-17703118)
chr7 (270-379)||(48810622-48810731)
[»] chr4 (20 HSPs)
chr4 (255-412)||(51603297-51603454)
chr4 (255-412)||(53749975-53750132)
chr4 (255-412)||(16155392-16155549)
chr4 (255-409)||(14992888-14993042)
chr4 (255-409)||(16151249-16151403)
chr4 (255-406)||(18260057-18260208)
chr4 (282-409)||(29450069-29450196)
chr4 (258-391)||(20893662-20893795)
chr4 (282-373)||(3261326-3261417)
chr4 (258-392)||(15073989-15074123)
chr4 (282-409)||(44658398-44658525)
chr4 (267-385)||(11203749-11203867)
chr4 (255-385)||(15267414-15267544)
chr4 (255-409)||(27903997-27904151)
chr4 (261-382)||(13879749-13879870)
chr4 (282-391)||(7357898-7358007)
chr4 (261-373)||(8709325-8709437)
chr4 (270-385)||(14300242-14300357)
chr4 (270-385)||(16247936-16248051)
chr4 (270-385)||(18604079-18604194)
[»] chr2 (12 HSPs)
chr2 (255-412)||(12577594-12577751)
chr2 (267-412)||(19716074-19716219)
chr2 (267-412)||(19720637-19720782)
chr2 (255-412)||(23097063-23097220)
chr2 (255-403)||(23274843-23274991)
chr2 (255-406)||(23296287-23296438)
chr2 (258-373)||(28351155-28351270)
chr2 (282-409)||(20848830-20848957)
chr2 (261-372)||(21901818-21901929)
chr2 (265-379)||(24816894-24817008)
chr2 (270-367)||(23104787-23104884)
chr2 (270-402)||(24873813-24873945)
[»] scaffold0765 (1 HSPs)
scaffold0765 (255-412)||(5765-5922)
[»] scaffold0005 (1 HSPs)
scaffold0005 (255-412)||(263865-264022)
[»] chr8 (23 HSPs)
chr8 (255-412)||(22027228-22027385)
chr8 (255-412)||(22054539-22054696)
chr8 (258-412)||(31413483-31413637)
chr8 (258-409)||(21929107-21929258)
chr8 (258-340)||(22374533-22374615)
chr8 (269-409)||(29300388-29300528)
chr8 (261-391)||(6606423-6606553)
chr8 (276-379)||(21330278-21330381)
chr8 (282-373)||(28984626-28984717)
chr8 (270-385)||(32603848-32603963)
chr8 (258-340)||(19985876-19985958)
chr8 (255-409)||(22004029-22004183)
chr8 (282-373)||(16268199-16268290)
chr8 (255-409)||(21998388-21998542)
chr8 (270-395)||(15537076-15537201)
chr8 (282-379)||(21970526-21970623)
chr8 (262-379)||(22710225-22710342)
chr8 (270-385)||(18860277-18860392)
chr8 (261-376)||(20391798-20391913)
chr8 (282-409)||(21981929-21982056)
chr8 (270-385)||(22117141-22117256)
chr8 (270-385)||(22125925-22126040)
chr8 (270-383)||(22114368-22114481)
[»] scaffold0518 (1 HSPs)
scaffold0518 (255-412)||(2470-2627)
[»] scaffold0239 (1 HSPs)
scaffold0239 (255-384)||(9307-9436)
[»] scaffold0003 (1 HSPs)
scaffold0003 (255-412)||(204020-204177)
[»] scaffold0348 (2 HSPs)
scaffold0348 (255-412)||(4355-4512)
scaffold0348 (346-412)||(17083-17149)
[»] scaffold0072 (1 HSPs)
scaffold0072 (262-412)||(54686-54836)
[»] scaffold0114 (1 HSPs)
scaffold0114 (255-412)||(40697-40854)
[»] scaffold0067 (4 HSPs)
scaffold0067 (255-412)||(48688-48845)
scaffold0067 (255-412)||(57722-57879)
scaffold0067 (255-412)||(64110-64267)
scaffold0067 (256-409)||(30266-30419)
[»] chr6 (24 HSPs)
chr6 (255-412)||(19438476-19438633)
chr6 (255-412)||(18798164-18798321)
chr6 (255-412)||(14376566-14376723)
chr6 (267-409)||(19456500-19456642)
chr6 (267-409)||(19466645-19466787)
chr6 (255-409)||(24515074-24515228)
chr6 (255-409)||(16814117-16814271)
chr6 (255-409)||(8720355-8720509)
chr6 (255-412)||(21566641-21566798)
chr6 (267-391)||(10465510-10465634)
chr6 (264-385)||(21475034-21475155)
chr6 (255-338)||(20010151-20010234)
chr6 (282-409)||(24367877-24368004)
chr6 (255-337)||(15462885-15462967)
chr6 (264-412)||(25771318-25771466)
chr6 (270-385)||(27206120-27206235)
chr6 (270-385)||(27242993-27243108)
chr6 (258-337)||(19485964-19486043)
chr6 (270-385)||(28259865-28259980)
chr6 (270-385)||(28285936-28286051)
chr6 (270-385)||(28338614-28338729)
chr6 (255-340)||(19881942-19882027)
chr6 (262-367)||(30677690-30677795)
chr6 (270-370)||(23084490-23084590)
[»] scaffold0243 (1 HSPs)
scaffold0243 (255-409)||(9282-9436)
[»] chr1 (20 HSPs)
chr1 (255-409)||(19857933-19858087)
chr1 (255-409)||(20832478-20832632)
chr1 (255-409)||(21742129-21742283)
chr1 (255-409)||(21738613-21738767)
chr1 (277-412)||(21961684-21961819)
chr1 (289-409)||(37680708-37680828)
chr1 (282-373)||(48426568-48426659)
chr1 (255-409)||(20853337-20853491)
chr1 (258-385)||(38909406-38909533)
chr1 (258-391)||(52989417-52989550)
chr1 (266-409)||(18273426-18273569)
chr1 (282-372)||(20298079-20298169)
chr1 (270-337)||(16670500-16670567)
chr1 (282-409)||(20074313-20074440)
chr1 (270-385)||(17041608-17041723)
chr1 (264-379)||(20922097-20922212)
chr1 (264-379)||(21044740-21044855)
chr1 (264-409)||(21752675-21752820)
chr1 (256-412)||(20047133-20047289)
chr1 (258-385)||(31536577-31536704)
[»] scaffold0020 (2 HSPs)
scaffold0020 (255-412)||(98091-98248)
scaffold0020 (258-392)||(176637-176771)
[»] scaffold0034 (3 HSPs)
scaffold0034 (250-388)||(11409-11547)
scaffold0034 (255-388)||(1460-1593)
scaffold0034 (255-409)||(71014-71168)
[»] scaffold0188 (1 HSPs)
scaffold0188 (267-412)||(32892-33037)
[»] scaffold0004 (1 HSPs)
scaffold0004 (255-412)||(319882-320039)
[»] scaffold0203 (1 HSPs)
scaffold0203 (256-412)||(3560-3716)
[»] scaffold0010 (3 HSPs)
scaffold0010 (255-409)||(38843-38997)
scaffold0010 (255-385)||(180347-180477)
scaffold0010 (345-409)||(15066-15130)
[»] scaffold0074 (1 HSPs)
scaffold0074 (255-412)||(15711-15868)
[»] scaffold0420 (1 HSPs)
scaffold0420 (261-412)||(9253-9404)
[»] scaffold0235 (2 HSPs)
scaffold0235 (255-409)||(7970-8124)
scaffold0235 (255-409)||(18184-18338)
[»] scaffold0222 (2 HSPs)
scaffold0222 (255-409)||(21408-21562)
scaffold0222 (300-412)||(40-152)
[»] scaffold0106 (1 HSPs)
scaffold0106 (255-409)||(34979-35133)
[»] scaffold0664 (1 HSPs)
scaffold0664 (255-412)||(96-253)
[»] scaffold0167 (1 HSPs)
scaffold0167 (255-388)||(5716-5849)
[»] scaffold1517 (1 HSPs)
scaffold1517 (258-409)||(1000-1149)
[»] scaffold0586 (1 HSPs)
scaffold0586 (255-391)||(226-362)
[»] scaffold1433 (1 HSPs)
scaffold1433 (262-409)||(826-973)
[»] scaffold0404 (1 HSPs)
scaffold0404 (262-409)||(8386-8533)
[»] scaffold0192 (1 HSPs)
scaffold0192 (258-385)||(30192-30319)
[»] scaffold0041 (1 HSPs)
scaffold0041 (282-409)||(42377-42504)
[»] scaffold1032 (1 HSPs)
scaffold1032 (255-409)||(323-477)
[»] scaffold0076 (1 HSPs)
scaffold0076 (267-409)||(52943-53085)
[»] scaffold1299 (1 HSPs)
scaffold1299 (255-412)||(1356-1513)
[»] scaffold0679 (1 HSPs)
scaffold0679 (258-379)||(546-667)
[»] scaffold0261 (2 HSPs)
scaffold0261 (255-404)||(11922-12071)
scaffold0261 (255-404)||(20102-20251)
[»] scaffold0190 (1 HSPs)
scaffold0190 (267-391)||(21815-21939)
[»] scaffold0098 (1 HSPs)
scaffold0098 (267-379)||(26132-26244)
[»] scaffold0026 (1 HSPs)
scaffold0026 (255-409)||(52293-52448)
[»] scaffold2062 (1 HSPs)
scaffold2062 (255-409)||(380-534)
[»] scaffold0009 (1 HSPs)
scaffold0009 (267-409)||(252261-252403)
[»] scaffold0367 (1 HSPs)
scaffold0367 (267-388)||(8541-8662)
[»] scaffold0476 (1 HSPs)
scaffold0476 (264-412)||(62-210)
[»] scaffold0068 (1 HSPs)
scaffold0068 (255-391)||(66616-66752)
[»] scaffold0058 (2 HSPs)
scaffold0058 (276-412)||(22761-22897)
scaffold0058 (267-340)||(16132-16205)
[»] scaffold0751 (1 HSPs)
scaffold0751 (255-382)||(5849-5976)
[»] scaffold0706 (1 HSPs)
scaffold0706 (255-409)||(4716-4871)
[»] scaffold0317 (1 HSPs)
scaffold0317 (306-409)||(3267-3370)
[»] scaffold0947 (1 HSPs)
scaffold0947 (255-409)||(1057-1211)
[»] scaffold0865 (1 HSPs)
scaffold0865 (258-376)||(783-901)
[»] scaffold0133 (1 HSPs)
scaffold0133 (258-376)||(27796-27914)
[»] scaffold0054 (1 HSPs)
scaffold0054 (255-409)||(63047-63201)
[»] scaffold0046 (2 HSPs)
scaffold0046 (255-409)||(70750-70904)
scaffold0046 (264-370)||(610-716)
[»] scaffold0017 (1 HSPs)
scaffold0017 (255-409)||(3962-4116)
[»] scaffold0023 (1 HSPs)
scaffold0023 (255-388)||(163909-164042)
[»] scaffold0335 (1 HSPs)
scaffold0335 (262-382)||(3819-3939)
[»] scaffold0310 (1 HSPs)
scaffold0310 (258-409)||(11619-11770)
[»] scaffold0276 (1 HSPs)
scaffold0276 (282-409)||(23458-23585)
[»] scaffold0156 (1 HSPs)
scaffold0156 (262-409)||(37581-37728)
[»] scaffold0053 (2 HSPs)
scaffold0053 (255-382)||(62280-62407)
scaffold0053 (255-409)||(64830-64984)
[»] scaffold0104 (1 HSPs)
scaffold0104 (255-409)||(42927-43081)
[»] scaffold0056 (1 HSPs)
scaffold0056 (255-409)||(391-545)
[»] scaffold0848 (1 HSPs)
scaffold0848 (258-379)||(4522-4643)
[»] scaffold0585 (1 HSPs)
scaffold0585 (264-392)||(378-506)
[»] scaffold1530 (1 HSPs)
scaffold1530 (255-382)||(1174-1301)
[»] scaffold0490 (1 HSPs)
scaffold0490 (255-382)||(3534-3661)
[»] scaffold0035 (1 HSPs)
scaffold0035 (311-409)||(6446-6544)
[»] scaffold1845 (1 HSPs)
scaffold1845 (258-391)||(815-948)
[»] scaffold1056 (1 HSPs)
scaffold1056 (255-404)||(2366-2514)
[»] scaffold0102 (1 HSPs)
scaffold0102 (267-404)||(43345-43481)
[»] scaffold0031 (1 HSPs)
scaffold0031 (277-405)||(116270-116398)
[»] scaffold0523 (2 HSPs)
scaffold0523 (255-382)||(6106-6233)
scaffold0523 (282-373)||(11278-11369)
[»] scaffold0457 (1 HSPs)
scaffold0457 (282-373)||(13589-13680)
[»] scaffold0434 (1 HSPs)
scaffold0434 (282-409)||(5437-5564)
[»] scaffold0282 (1 HSPs)
scaffold0282 (264-379)||(9639-9754)
[»] scaffold0113 (1 HSPs)
scaffold0113 (258-385)||(17905-18032)
[»] scaffold0100 (1 HSPs)
scaffold0100 (261-332)||(11425-11496)
[»] scaffold0007 (2 HSPs)
scaffold0007 (264-379)||(162525-162640)
scaffold0007 (270-409)||(49304-49443)
[»] scaffold0505 (1 HSPs)
scaffold0505 (261-379)||(2423-2541)
[»] scaffold0405 (1 HSPs)
scaffold0405 (306-376)||(6277-6347)
[»] scaffold0029 (1 HSPs)
scaffold0029 (255-325)||(93402-93472)
[»] scaffold0180 (1 HSPs)
scaffold0180 (296-373)||(30577-30654)
[»] scaffold0044 (1 HSPs)
scaffold0044 (270-385)||(4087-4202)
[»] scaffold0001 (3 HSPs)
scaffold0001 (276-371)||(167713-167808)
scaffold0001 (265-379)||(442324-442438)
scaffold0001 (282-391)||(513888-513997)
[»] scaffold0671 (1 HSPs)
scaffold0671 (261-379)||(3621-3739)
[»] scaffold0266 (1 HSPs)
scaffold0266 (255-409)||(17279-17433)
[»] scaffold1881 (1 HSPs)
scaffold1881 (270-409)||(3-142)
[»] scaffold0071 (1 HSPs)
scaffold0071 (258-409)||(2867-3018)
[»] scaffold0431 (1 HSPs)
scaffold0431 (270-392)||(11023-11145)
[»] scaffold0151 (1 HSPs)
scaffold0151 (255-373)||(50-168)
[»] scaffold0018 (1 HSPs)
scaffold0018 (265-379)||(8868-8982)
[»] scaffold0148 (1 HSPs)
scaffold0148 (255-368)||(2682-2795)
[»] scaffold0118 (1 HSPs)
scaffold0118 (282-391)||(1121-1230)
[»] scaffold0019 (1 HSPs)
scaffold0019 (300-409)||(171761-171870)
[»] scaffold0108 (1 HSPs)
scaffold0108 (345-409)||(50747-50811)
[»] scaffold0088 (1 HSPs)
scaffold0088 (345-409)||(30552-30616)


Alignment Details
Target: chr5 (Bit Score: 146; Significance: 9e-77; HSPs: 36)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 146; E-Value: 9e-77
Query Start/End: Original strand, 255 - 412
Target Start/End: Original strand, 17266022 - 17266178
Alignment:
Q  255 gaatttctgaacaggtacttcccggaagatgtccgaggtaggaaggagatcgaatttctggagttgaagcagggtgatatgtctgttgttgagtatgctg 354  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  17266022 gaatttctgaacaggtactttccggaagatgtccgaggtaggaaggagatcgaatttctggagttgaagcagggtgatatgtctgttgttgagtatgctg 17266121  T
Q  355 caaaatttgtggagcttgcaaagttctacccccattatgctccggagacagctgaatt 412  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  17266122 caaaatttgtggagcttgcaaagttcta-ccccattatgctccggagacagctgaatt 17266178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 11 - 173
Target Start/End: Complemental strand, 28423062 - 28422884
Alignment:
Q  11 ctaatgtgtcacatgtatgtaattctgagagactagtttggatattaattttgtcaggaagtaatttcagtattac----------------atcaattt 94  Q
    ||||||||| || ||||||||| | |||||||||| ||||||||||||||||||||||||||||||| ||||||||                ||  | |     
T  28423062 ctaatgtgttacctgtatgtaactgtgagagactaatttggatattaattttgtcaggaagtaatttgagtattacttttgtcataaactacattgagtc 28422963  T
Q  95 gcgtccaatttgttcgggactaattcggtatttagtctatttataaagcaacatcggaacaataagacatgtatgcaga 173  Q
    |||| ||||||||| ||| |||||||  |||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  28422962 gcgttcaatttgttaggggctaattcaatatttagtttatttataaagcaacatcggaacaataagacatgtatgcaga 28422884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 266 - 409
Target Start/End: Original strand, 14883689 - 14883832
Alignment:
Q  266 caggtacttcccggaagatgtccgaggtaggaaggagatcgaatttctggagttgaagcagggtgatatgtctgttgttgagtatgctgcaaaatttgtg 365  Q
    |||||| || || ||||||||| |||||| ||||||||| ||||||||||||||||| |||||||| ||||||||    |||||||||||||| ||||||    
T  14883689 caggtattttccagaagatgtcagaggtaagaaggagattgaatttctggagttgaaacagggtgacatgtctgtcacagagtatgctgcaaagtttgtg 14883788  T
Q  366 gagcttgcaaagttctacccccattatgctccggagacagctga 409  Q
    |||||||| |  |||||||| |||||   | |||||||||||||    
T  14883789 gagcttgccacattctaccctcattacagtgcggagacagctga 14883832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 255 - 408
Target Start/End: Original strand, 23562856 - 23563009
Alignment:
Q  255 gaatttctgaacaggtacttcccggaagatgtccgaggtaggaaggagatcgaatttctggagttgaagcagggtgatatgtctgttgttgagtatgctg 354  Q
    ||||| ||||| |||||||| ||| ||||||||||||| | ||| || || || ||||||||  |||||||||| |||||||| |||   ||||||||||    
T  23562856 gaattcctgaataggtactttccgaaagatgtccgaggaaagaaagaaattgagtttctggaactgaagcagggggatatgtcagttacagagtatgctg 23562955  T
Q  355 caaaatttgtggagcttgcaaagttctacccccattatgctccggagacagctg 408  Q
    |||| |||||||| ||||  |||||||||||||| ||| || ||||||||||||    
T  23562956 caaagtttgtggaacttgttaagttctacccccagtatactacggagacagctg 23563009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 95 - 173
Target Start/End: Complemental strand, 14691308 - 14691230
Alignment:
Q  95 gcgtccaatttgttcgggactaattcggtatttagtctatttataaagcaacatcggaacaataagacatgtatgcaga 173  Q
    ||||||||||||||  | |||||||||||||| ||||||||||||||||||||||| |||||| |||||||||||||||    
T  14691308 gcgtccaatttgttacgaactaattcggtattcagtctatttataaagcaacatcgaaacaatgagacatgtatgcaga 14691230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 255 - 373
Target Start/End: Complemental strand, 43123148 - 43123030
Alignment:
Q  255 gaatttctgaacaggtacttcccggaagatgtccgaggtaggaaggagatcgaatttctggagttgaagcagggtgatatgtctgttgttgagtatgctg 354  Q
    |||||||||| ||||||||| ||||||||||||||||||| ||| || || ||||| ||||||||||||||||| || ||||||||   ||  |||||||    
T  43123148 gaatttctgagcaggtactttccggaagatgtccgaggtaagaaagaaattgaattcctggagttgaagcagggagacatgtctgtaactgcatatgctg 43123049  T
Q  355 caaaatttgtggagcttgc 373  Q
    |||| ||||| ||||||||    
T  43123048 caaagtttgtagagcttgc 43123030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 191 - 259
Target Start/End: Original strand, 14680589 - 14680656
Alignment:
Q  191 aaatcacattctcaggctaagctaccaagaaatctaccaaagcattaatcctatcatttgtactgaatt 259  Q
    ||||||||| ||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||    
T  14680589 aaatcacat-ctcaggctaagctgccaagaaatctaccaaagcattaatcctatcatttgtattgaatt 14680656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 267 - 391
Target Start/End: Complemental strand, 20345951 - 20345827
Alignment:
Q  267 aggtacttcccggaagatgtccgaggtaggaaggagatcgaatttctggagttgaagcagggtgatatgtctgttgttgagtatgctgcaaaatttgtgg 366  Q
    ||||||||||||||||||||||| || | ||| ||||| || ||| ||||||||||||||||||| ||||||||    |||||||||||||| |||||||    
T  20345951 aggtacttcccggaagatgtccggggaaagaaagagattgagtttatggagttgaagcagggtgacatgtctgtcacagagtatgctgcaaagtttgtgg 20345852  T
Q  367 agcttgcaaagttctacccccatta 391  Q
    | ||||| |  |||||||| |||||    
T  20345851 aacttgccacattctaccctcatta 20345827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 255 - 391
Target Start/End: Original strand, 16257723 - 16257859
Alignment:
Q  255 gaatttctgaacaggtacttcccggaagatgtccgaggtaggaaggagatcgaatttctggagttgaagcagggtgatatgtctgttgttgagtatgctg 354  Q
    ||||| ||||| ||||| || ||||| ||||||||||| |  ||||| || |||||||||||| |||| ||||| |||||||| |||   ||||||||||    
T  16257723 gaattcctgaataggtattttccggaggatgtccgagggaaaaaggaaattgaatttctggagctgaaacagggggatatgtcagttacggagtatgctg 16257822  T
Q  355 caaaatttgtggagcttgcaaagttctacccccatta 391  Q
    | || |||||||| ||||| ||||||||||| |||||    
T  16257823 ctaagtttgtggaacttgctaagttctaccctcatta 16257859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 255 - 391
Target Start/End: Original strand, 22591442 - 22591578
Alignment:
Q  255 gaatttctgaacaggtacttcccggaagatgtccgaggtaggaaggagatcgaatttctggagttgaagcagggtgatatgtctgttgttgagtatgctg 354  Q
    ||||| ||||| ||||| || ||||| ||||||||||| |  ||||| || |||||||||||| |||| ||||| |||||||| |||   ||||||||||    
T  22591442 gaattcctgaataggtattttccggaggatgtccgagggaaaaaggaaattgaatttctggagctgaaacagggggatatgtcagttacggagtatgctg 22591541  T
Q  355 caaaatttgtggagcttgcaaagttctacccccatta 391  Q
    | || |||||||| ||||| ||||||||||| |||||    
T  22591542 ctaagtttgtggaacttgctaagttctaccctcatta 22591578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 255 - 391
Target Start/End: Original strand, 22594997 - 22595133
Alignment:
Q  255 gaatttctgaacaggtacttcccggaagatgtccgaggtaggaaggagatcgaatttctggagttgaagcagggtgatatgtctgttgttgagtatgctg 354  Q
    ||||| ||||| ||||| || ||||| ||||||||||| |  ||||| || |||||||||||| |||| ||||| |||||||| |||   ||||||||||    
T  22594997 gaattcctgaataggtattttccggaggatgtccgagggaaaaaggaaattgaatttctggagctgaaacagggggatatgtcagttacggagtatgctg 22595096  T
Q  355 caaaatttgtggagcttgcaaagttctacccccatta 391  Q
    | || |||||||| ||||| ||||||||||| |||||    
T  22595097 ctaagtttgtggaacttgctaagttctaccctcatta 22595133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 258 - 373
Target Start/End: Complemental strand, 23670310 - 23670195
Alignment:
Q  258 tttctgaacaggtacttcccggaagatgtccgaggtaggaaggagatcgaatttctggagttgaagcagggtgatatgtctgttgttgagtatgctgcaa 357  Q
    ||||||| ||||||||| ||||| ||||||||||||| ||| ||||| ||||| ||||||||||| ||||| || ||||||||   ||  ||||||||||    
T  23670310 tttctgagcaggtactttccggaggatgtccgaggtaagaaagagattgaattcctggagttgaaacagggagacatgtctgtaactgcatatgctgcaa 23670211  T
Q  358 aatttgtggagcttgc 373  Q
    | ||||| ||||||||    
T  23670210 agtttgttgagcttgc 23670195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 255 - 409
Target Start/End: Original strand, 21869965 - 21870119
Alignment:
Q  255 gaatttctgaacaggtacttcccggaagatgtccgaggtaggaaggagatcgaatttctggagttgaagcagggtgatatgtctgttgttgagtatgctg 354  Q
    ||||| ||||| |||||||| ||||| |||||  |||||| |||||| || || |||||||| ||||| ||||| || ||||||||    ||||||||||    
T  21869965 gaattcctgaataggtactttccggaggatgtatgaggtaagaaggaaattgagtttctggaattgaaacagggggacatgtctgtgacggagtatgctg 21870064  T
Q  355 caaaatttgtggagcttgcaaagttctacccccattatgctccggagacagctga 409  Q
    | || |||||||| ||||| |||||||| || ||||||  | |||||||||||||    
T  21870065 cgaagtttgtggaacttgctaagttctatcctcattataatgcggagacagctga 21870119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 255 - 409
Target Start/End: Original strand, 21874245 - 21874399
Alignment:
Q  255 gaatttctgaacaggtacttcccggaagatgtccgaggtaggaaggagatcgaatttctggagttgaagcagggtgatatgtctgttgttgagtatgctg 354  Q
    ||||| ||||| |||||||| ||||| |||||  |||||| |||||| || || |||||||| ||||| ||||| || ||||||||    ||||||||||    
T  21874245 gaattcctgaataggtactttccggaggatgtatgaggtaagaaggaaattgagtttctggaattgaaacagggggacatgtctgtgacggagtatgctg 21874344  T
Q  355 caaaatttgtggagcttgcaaagttctacccccattatgctccggagacagctga 409  Q
    | || |||||||| ||||| |||||||| || ||||||  | |||||||||||||    
T  21874345 cgaagtttgtggaacttgctaagttctatcctcattataatgcggagacagctga 21874399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 270 - 409
Target Start/End: Complemental strand, 22465616 - 22465477
Alignment:
Q  270 tacttcccggaagatgtccgaggtaggaaggagatcgaatttctggagttgaagcagggtgatatgtctgttgttgagtatgctgcaaaatttgtggagc 369  Q
    ||||| ||||||||||||||||| | ||| || || |||||||||||||||||||||||||| ||||||||    ||||||||||| || ||   ||| |    
T  22465616 tactttccggaagatgtccgagggaagaaagaaatagaatttctggagttgaagcagggtgacatgtctgtcacagagtatgctgccaagttcacggaac 22465517  T
Q  370 ttgcaaagttctacccccattatgctccggagacagctga 409  Q
    |||||||||| || || || ||  || |||||||||||||    
T  22465516 ttgcaaagttttatcctcactacactgcggagacagctga 22465477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 282 - 391
Target Start/End: Complemental strand, 22506333 - 22506224
Alignment:
Q  282 gatgtccgaggtaggaaggagatcgaatttctggagttgaagcagggtgatatgtctgttgttgagtatgctgcaaaatttgtggagcttgcaaagttct 381  Q
    |||||| |||||| ||| ||||| || |||||||||||||| |||||||| ||||| ||    ||||||||||| |  |||||||||||||| |||||||    
T  22506333 gatgtcagaggtaagaaagagattgagtttctggagttgaaacagggtgacatgtccgtcacggagtatgctgctaggtttgtggagcttgctaagttct 22506234  T
Q  382 acccccatta 391  Q
    |||| |||||    
T  22506233 accctcatta 22506224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 318 - 409
Target Start/End: Original strand, 23077655 - 23077746
Alignment:
Q  318 ttgaagcagggtgatatgtctgttgttgagtatgctgcaaaatttgtggagcttgcaaagttctacccccattatgctccggagacagctga 409  Q
    ||||| ||||||||||||||||||   ||||||||||| || || ||||| ||||| |||||||||||||||||   | |||||||||||||    
T  23077655 ttgaaacagggtgatatgtctgttacggagtatgctgctaagttcgtggaacttgctaagttctacccccattacagtgcggagacagctga 23077746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 255 - 337
Target Start/End: Original strand, 28891629 - 28891711
Alignment:
Q  255 gaatttctgaacaggtacttcccggaagatgtccgaggtaggaaggagatcgaatttctggagttgaagcagggtgatatgtc 337  Q
    ||||| ||||| || ||||| ||||||||||||||||| | ||| || || ||||||||||||||||| |||||||| |||||    
T  28891629 gaattcctgaatagatactttccggaagatgtccgagggaagaaagaaatagaatttctggagttgaaacagggtgacatgtc 28891711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 191 - 243
Target Start/End: Complemental strand, 14683282 - 14683230
Alignment:
Q  191 aaatcacattctcaggctaagctaccaagaaatctaccaaagcattaatccta 243  Q
    |||||||||||||||||||| ||||| |||||||||||||| |||||| ||||    
T  14683282 aaatcacattctcaggctaaactacctagaaatctaccaaatcattaacccta 14683230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 282 - 409
Target Start/End: Complemental strand, 25851726 - 25851599
Alignment:
Q  282 gatgtccgaggtaggaaggagatcgaatttctggagttgaagcagggtgatatgtctgttgttgagtatgctgcaaaatttgtggagcttgcaaagttct 381  Q
    |||||| |||| | ||| ||||| || |||||||||||||| |||||||| ||||||||    |||||||||||||| ||||||||  |||| |  ||||    
T  25851726 gatgtcagaggaaagaaagagattgagtttctggagttgaaacagggtgacatgtctgtcacagagtatgctgcaaagtttgtggaaattgccacattct 25851627  T
Q  382 acccccattatgctccggagacagctga 409  Q
    |||| || |||  | |||||||||||||    
T  25851626 accctcactatagtgcggagacagctga 25851599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 270 - 337
Target Start/End: Original strand, 28911490 - 28911557
Alignment:
Q  270 tacttcccggaagatgtccgaggtaggaaggagatcgaatttctggagttgaagcagggtgatatgtc 337  Q
    ||||| ||||||||||||||||| | ||| || || ||||||||||||||||| |||||||| |||||    
T  28911490 tactttccggaagatgtccgagggaagaaagaaatagaatttctggagttgaaacagggtgacatgtc 28911557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 270 - 337
Target Start/End: Original strand, 28926758 - 28926825
Alignment:
Q  270 tacttcccggaagatgtccgaggtaggaaggagatcgaatttctggagttgaagcagggtgatatgtc 337  Q
    ||||| ||||||||||||||||| | ||| || || ||||||||||||||||| |||||||| |||||    
T  28926758 tactttccggaagatgtccgagggaagaaagaaatagaatttctggagttgaaacagggtgacatgtc 28926825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 270 - 385
Target Start/End: Original strand, 37288201 - 37288316
Alignment:
Q  270 tacttcccggaagatgtccgaggtaggaaggagatcgaatttctggagttgaagcagggtgatatgtctgttgttgagtatgctgcaaaatttgtggagc 369  Q
    ||||| ||||||||||| || || | |||||||||||| || || ||||||||||| ||  | ||||||||    ||||||||||| || ||||||||||    
T  37288201 tactttccggaagatgttcgcgggaagaaggagatcgagttccttgagttgaagcaaggaaacatgtctgtgacagagtatgctgccaagtttgtggagc 37288300  T
Q  370 ttgcaaagttctaccc 385  Q
    |  |||||||||||||    
T  37288301 tgtcaaagttctaccc 37288316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 36 - 86
Target Start/End: Complemental strand, 14691384 - 14691334
Alignment:
Q  36 tgagagactagtttggatattaattttgtcaggaagtaatttcagtattac 86  Q
    |||||||||| ||||||||||||||||||| | ||||||||| ||||||||    
T  14691384 tgagagactaatttggatattaattttgtccgaaagtaatttgagtattac 14691334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 255 - 337
Target Start/End: Complemental strand, 20770819 - 20770737
Alignment:
Q  255 gaatttctgaacaggtacttcccggaagatgtccgaggtaggaaggagatcgaatttctggagttgaagcagggtgatatgtc 337  Q
    ||||| ||||| || ||||| ||||||||||||||||| | ||| || || |||||||| |||||||| |||||||| |||||    
T  20770819 gaattcctgaatagatactttccggaagatgtccgagggaagaaagaaatagaatttctagagttgaaacagggtgacatgtc 20770737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 255 - 337
Target Start/End: Complemental strand, 20779594 - 20779512
Alignment:
Q  255 gaatttctgaacaggtacttcccggaagatgtccgaggtaggaaggagatcgaatttctggagttgaagcagggtgatatgtc 337  Q
    ||||| ||||| || ||||| ||||||||||||||||| | ||| || || |||||||| |||||||| |||||||| |||||    
T  20779594 gaattcctgaatagatactttccggaagatgtccgagggaagaaagaaatagaatttctagagttgaaacagggtgacatgtc 20779512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 269 - 373
Target Start/End: Original strand, 21560726 - 21560830
Alignment:
Q  269 gtacttcccggaagatgtccgaggtaggaaggagatcgaatttctggagttgaagcagggtgatatgtctgttgttgagtatgctgcaaaatttgtggag 368  Q
    |||||| || ||||||||||  || | ||| |||||||| ||||| || ||||| ||||| |||||||| ||   ||||||||||||||| ||||||||     
T  21560726 gtactttccagaagatgtccatggaaagaaagagatcgagtttcttgaattgaaacagggagatatgtcagtaactgagtatgctgcaaagtttgtggat 21560825  T
Q  369 cttgc 373  Q
    |||||    
T  21560826 cttgc 21560830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 261 - 373
Target Start/End: Original strand, 21982185 - 21982297
Alignment:
Q  261 ctgaacaggtacttcccggaagatgtccgaggtaggaaggagatcgaatttctggagttgaagcagggtgatatgtctgttgttgagtatgctgcaaaat 360  Q
    |||||||||||||| || |||||||| || || | ||| ||||| || ||||| || ||||| ||||| ||||||||  |   |||||||| |||||| |    
T  21982185 ctgaacaggtactttccagaagatgttcgtggaaagaaagagattgagtttcttgaattgaaacagggagatatgtcaataactgagtatgttgcaaagt 21982284  T
Q  361 ttgtggagcttgc 373  Q
    |||||||||||||    
T  21982285 ttgtggagcttgc 21982297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 270 - 385
Target Start/End: Original strand, 14996444 - 14996559
Alignment:
Q  270 tacttcccggaagatgtccgaggtaggaaggagatcgaatttctggagttgaagcagggtgatatgtctgttgttgagtatgctgcaaaatttgtggagc 369  Q
    ||||| ||||||||||| || || | |||||||||||| || || ||||||||||| ||  | ||||||||    ||||||||||| || || |||||||    
T  14996444 tactttccggaagatgttcgcgggaagaaggagatcgagttccttgagttgaagcaaggaaacatgtctgtgacagagtatgctgccaagttcgtggagc 14996543  T
Q  370 ttgcaaagttctaccc 385  Q
    |  |||||||||||||    
T  14996544 tgtcaaagttctaccc 14996559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 270 - 337
Target Start/End: Complemental strand, 20825119 - 20825052
Alignment:
Q  270 tacttcccggaagatgtccgaggtaggaaggagatcgaatttctggagttgaagcagggtgatatgtc 337  Q
    ||||| || |||||||||||||| | ||| || || ||||| ||||||||||| ||||||||||||||    
T  20825119 tactttccagaagatgtccgagggaagaaagaaatagaattcctggagttgaaacagggtgatatgtc 20825052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 278 - 385
Target Start/End: Complemental strand, 22138341 - 22138234
Alignment:
Q  278 ggaagatgtccgaggtaggaaggagatcgaatttctggagttgaagcagggtgatatgtctgttgttgagtatgctgcaaaatttgtggagcttgcaaag 377  Q
    ||||||||| || || | |||||||||||| || || ||||||||||| ||  ||||||||||    ||||||||||| || || |||||||| || |||    
T  22138341 ggaagatgttcgcgggaagaaggagatcgagttccttgagttgaagcaaggaaatatgtctgtgacagagtatgctgccaagttcgtggagctggcgaag 22138242  T
Q  378 ttctaccc 385  Q
    ||||||||    
T  22138241 ttctaccc 22138234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 270 - 385
Target Start/End: Original strand, 27682105 - 27682220
Alignment:
Q  270 tacttcccggaagatgtccgaggtaggaaggagatcgaatttctggagttgaagcagggtgatatgtctgttgttgagtatgctgcaaaatttgtggagc 369  Q
    ||||| ||||||||||| || || | |||||||||||| || || ||||||||||| ||  | ||||||||    ||||||||||| || || |||||||    
T  27682105 tactttccggaagatgttcgcgggaagaaggagatcgagttccttgagttgaagcaaggaaacatgtctgtgacagagtatgctgccaagttcgtggagc 27682204  T
Q  370 ttgcaaagttctaccc 385  Q
    |  |||||||||||||    
T  27682205 tgtcaaagttctaccc 27682220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 197 - 259
Target Start/End: Complemental strand, 41688360 - 41688298
Alignment:
Q  197 cattctcaggctaagctaccaagaaatctaccaaagcattaatcctatcatttgtactgaatt 259  Q
    ||||| ||||| |||||||  ||| |||||||||||||||||||| |||| ||||| ||||||    
T  41688360 cattcccaggccaagctacttagagatctaccaaagcattaatccaatcacttgtattgaatt 41688298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 262 - 367
Target Start/End: Original strand, 21631093 - 21631198
Alignment:
Q  262 tgaacaggtacttcccggaagatgtccgaggtaggaaggagatcgaatttctggagttgaagcagggtgatatgtctgttgttgagtatgctgcaaaatt 361  Q
    ||||||| ||||| ||||||||||| || || | ||| ||||| || ||||| ||| ||||||||||||| ||||| ||    ||| |||||||||| ||    
T  21631093 tgaacagatactttccggaagatgttcgcgggaagaaagagattgagtttcttgagctgaagcagggtgacatgtcggtgaccgagcatgctgcaaagtt 21631192  T
Q  362 tgtgga 367  Q
    ||||||    
T  21631193 tgtgga 21631198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 345 - 409
Target Start/End: Complemental strand, 18782723 - 18782659
Alignment:
Q  345 gagtatgctgcaaaatttgtggagcttgcaaagttctacccccattatgctccggagacagctga 409  Q
    ||||||||||| |||||||||||| | ||||||||||| || || |||||| | ||||| |||||    
T  18782723 gagtatgctgccaaatttgtggagttggcaaagttctatccgcactatgctgctgagaccgctga 18782659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 255 - 379
Target Start/End: Complemental strand, 21410831 - 21410707
Alignment:
Q  255 gaatttctgaacaggtacttcccggaagatgtccgaggtaggaaggagatcgaatttctggagttgaagcagggtgatatgtctgttgttgagtatgctg 354  Q
    ||||| ||||| | |||||| ||||||||||| |  || | |||| | || || || |||||||||||||| ||||||||||| || |  ||||||||||    
T  21410831 gaattcctgaataagtactttccggaagatgttcacgggaagaagaaaattgagttcctggagttgaagcaaggtgatatgtcagtggcggagtatgctg 21410732  T
Q  355 caaaatttgtggagcttgcaaagtt 379  Q
    | || ||||| ||| | ||||||||    
T  21410731 ctaagtttgttgagttggcaaagtt 21410707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 142; Significance: 2e-74; HSPs: 34)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 142; E-Value: 2e-74
Query Start/End: Original strand, 255 - 412
Target Start/End: Complemental strand, 13945420 - 13945263
Alignment:
Q  255 gaatttctgaacaggtacttcccggaagatgtccgaggtaggaaggagatcgaatttctggagttgaagcagggtgatatgtctgttgttgagtatgctg 354  Q
    ||||||||||| ||||| |||||||||||||||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||    
T  13945420 gaatttctgaataggtatttcccggaagatgtccgaggtaggaaggagattgaattcctggagttgaagcagggtgatatgtctgttgttgagtatgctg 13945321  T
Q  355 caaaatttgtggagcttgcaaagttctacccccattatgctccggagacagctgaatt 412  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  13945320 caaaatttgtggagcttgcaaagttctacccccattatgctccggagacagctgaatt 13945263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 134; E-Value: 1e-69
Query Start/End: Original strand, 255 - 412
Target Start/End: Original strand, 16831261 - 16831418
Alignment:
Q  255 gaatttctgaacaggtacttcccggaagatgtccgaggtaggaaggagatcgaatttctggagttgaagcagggtgatatgtctgttgttgagtatgctg 354  Q
    |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  16831261 gaatttctgaacaggtacttcccggaagatgtccgaggtaggaaagagatcgaatttctggagttgaagcagggtgatatgtctgttgttgagtatgctg 16831360  T
Q  355 caaaatttgtggagcttgcaaagttctacccccattatgctccggagacagctgaatt 412  Q
    |||| |||||||| |||||||||||||||||||| ||| || ||||||||||||||||    
T  16831361 caaagtttgtggaacttgcaaagttctacccccactatactgcggagacagctgaatt 16831418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 130; E-Value: 3e-67
Query Start/End: Original strand, 255 - 412
Target Start/End: Original strand, 8744123 - 8744280
Alignment:
Q  255 gaatttctgaacaggtacttcccggaagatgtccgaggtaggaaggagatcgaatttctggagttgaagcagggtgatatgtctgttgttgagtatgctg 354  Q
    ||||||||||| |||||||||||||||||||| ||||||||||||||||| || || ||||| |||||||||||||||||||||||||||||||||||||    
T  8744123 gaatttctgaataggtacttcccggaagatgttcgaggtaggaaggagattgagttcctggaattgaagcagggtgatatgtctgttgttgagtatgctg 8744222  T
Q  355 caaaatttgtggagcttgcaaagttctacccccattatgctccggagacagctgaatt 412  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  8744223 caaaatttgtggagcttgcaaagttctatccccattatgctccggagacagctgaatt 8744280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 126; E-Value: 8e-65
Query Start/End: Original strand, 255 - 412
Target Start/End: Original strand, 16384105 - 16384262
Alignment:
Q  255 gaatttctgaacaggtacttcccggaagatgtccgaggtaggaaggagatcgaatttctggagttgaagcagggtgatatgtctgttgttgagtatgctg 354  Q
    |||||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  16384105 gaatttctgaacaggtactttccggaagatgttcgaggtaggaaggagatcgaatttctggagctgaagcagggtgatatgtctgttgttgagtatgctg 16384204  T
Q  355 caaaatttgtggagcttgcaaagttctacccccattatgctccggagacagctgaatt 412  Q
    |||| |||||||| ||||||||||| |||||||||||| || ||||||||||||||||    
T  16384205 caaagtttgtggaacttgcaaagttatacccccattatactgcggagacagctgaatt 16384262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 74; E-Value: 8e-34
Query Start/End: Original strand, 255 - 412
Target Start/End: Complemental strand, 31942299 - 31942142
Alignment:
Q  255 gaatttctgaacaggtacttcccggaagatgtccgaggtaggaaggagatcgaatttctggagttgaagcagggtgatatgtctgttgttgagtatgctg 354  Q
    ||||| ||||| |||||||||||||||||||||||||| | ||||||  | |||||| ||||| ||||||||||||| ||||||||    ||||||||||    
T  31942299 gaattcctgaataggtacttcccggaagatgtccgaggaaagaaggaagttgaatttatggagctgaagcagggtgacatgtctgtcacagagtatgctg 31942200  T
Q  355 caaaatttgtggagcttgcaaagttctacccccattatgctccggagacagctgaatt 412  Q
    | || || ||||| ||||||||||||||||| |||||| || ||||||||||||||||    
T  31942199 ctaagttcgtggaacttgcaaagttctaccctcattatactacggagacagctgaatt 31942142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 255 - 412
Target Start/End: Original strand, 31691918 - 31692075
Alignment:
Q  255 gaatttctgaacaggtacttcccggaagatgtccgaggtaggaaggagatcgaatttctggagttgaagcagggtgatatgtctgttgttgagtatgctg 354  Q
    ||||||||||| |||||||||| | ||||||||||||| | |||||| || |||||||||||| ||||||||||||| |||| |||    ||||||||||    
T  31691918 gaatttctgaataggtacttcctgaaagatgtccgaggaaagaaggaaattgaatttctggagctgaagcagggtgacatgtttgtcacagagtatgctg 31692017  T
Q  355 caaaatttgtggagcttgcaaagttctacccccattatgctccggagacagctgaatt 412  Q
    | || || ||||| ||||||||||||||||| |||||| || || |||||||||||||    
T  31692018 ctaagttcgtggaacttgcaaagttctaccctcattatactacgaagacagctgaatt 31692075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 255 - 405
Target Start/End: Original strand, 13317302 - 13317452
Alignment:
Q  255 gaatttctgaacaggtacttcccggaagatgtccgaggtaggaaggagatcgaatttctggagttgaagcagggtgatatgtctgttgttgagtatgctg 354  Q
    ||||| ||||| || ||||| ||||||||||||||||| | ||| ||||||||||| |||||||||||||||||||| ||||||||    ||||||||||    
T  13317302 gaattcctgaatagatactttccggaagatgtccgaggaaagaaagagatcgaattcctggagttgaagcagggtgacatgtctgtcacagagtatgctg 13317401  T
Q  355 caaaatttgtggagcttgcaaagttctacccccattatgctccggagacag 405  Q
    | || |||||||| |||||||| || ||||| || ||| || |||||||||    
T  13317402 ctaagtttgtggaacttgcaaaattttaccctcactatactgcggagacag 13317452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 261 - 409
Target Start/End: Original strand, 18131086 - 18131234
Alignment:
Q  261 ctgaacaggtacttcccggaagatgtccgaggtaggaaggagatcgaatttctggagttgaagcagggtgatatgtctgttgttgagtatgctgcaaaat 360  Q
    ||||| |||||||| ||||| ||||||| ||| | ||||||||| || ||||||||| |||||||||| ||||||||||||   || |||||||| || |    
T  18131086 ctgaataggtactttccggaggatgtcctaggcaagaaggagattgagtttctggagctgaagcagggggatatgtctgttacagaatatgctgcgaagt 18131185  T
Q  361 ttgtggagcttgcaaagttctacccccattatgctccggagacagctga 409  Q
    ||||||| ||||| |||||||||||||| ||| |  |||||||||||||    
T  18131186 ttgtggaacttgctaagttctacccccactataccacggagacagctga 18131234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 269 - 412
Target Start/End: Original strand, 11957928 - 11958071
Alignment:
Q  269 gtacttcccggaagatgtccgaggtaggaaggagatcgaatttctggagttgaagcagggtgatatgtctgttgttgagtatgctgcaaaatttgtggag 368  Q
    |||||||||||||||||||||||||| ||||||||| ||||||||||| ||||| || ||||||||||| |||   || |||||||| || || |||||     
T  11957928 gtacttcccggaagatgtccgaggtaagaaggagattgaatttctggaattgaaacaaggtgatatgtccgttacggaatatgctgctaagttcgtggaa 11958027  T
Q  369 cttgcaaagttctacccccattatgctccggagacagctgaatt 412  Q
    ||||  ||||||||||| |||||   | ||||||||||||||||    
T  11958028 cttgttaagttctaccctcattacagtgcggagacagctgaatt 11958071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 255 - 409
Target Start/End: Complemental strand, 12181740 - 12181586
Alignment:
Q  255 gaatttctgaacaggtacttcccggaagatgtccgaggtaggaaggagatcgaatttctggagttgaagcagggtgatatgtctgttgttgagtatgctg 354  Q
    ||||| ||||| |||||||| ||||| |||||  |||| | ||| ||||| ||||||||| ||||||||  ||| ||||||||||||   ||||||||||    
T  12181740 gaattcctgaataggtactttccggaggatgtttgaggaaagaaagagattgaatttctgtagttgaagtggggggatatgtctgttacagagtatgctg 12181641  T
Q  355 caaaatttgtggagcttgcaaagttctacccccattatgctccggagacagctga 409  Q
    |||| |||||||| ||||| ||||||||||| || ||| || |||||||||||||    
T  12181640 caaagtttgtggaacttgctaagttctaccctcactatactgcggagacagctga 12181586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 255 - 409
Target Start/End: Complemental strand, 17495046 - 17494892
Alignment:
Q  255 gaatttctgaacaggtacttcccggaagatgtccgaggtaggaaggagatcgaatttctggagttgaagcagggtgatatgtctgttgttgagtatgctg 354  Q
    ||||| ||||| |||||||| ||||| ||||||||||| | ||| || || || ||||| ||| ||||  |||| ||||||||||||   ||||||||||    
T  17495046 gaattcctgaataggtactttccggaggatgtccgaggaaagaaagaaattgagtttctagagctgaaatagggggatatgtctgttacagagtatgctg 17494947  T
Q  355 caaaatttgtggagcttgcaaagttctacccccattatgctccggagacagctga 409  Q
    |||| |||||||| ||||| |||||||||||||| ||| || |||||||||||||    
T  17494946 caaagtttgtggaacttgctaagttctacccccactatactgcggagacagctga 17494892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 255 - 412
Target Start/End: Complemental strand, 17189770 - 17189613
Alignment:
Q  255 gaatttctgaacaggtacttcccggaagatgtccgaggtaggaaggagatcgaatttctggagttgaagcagggtgatatgtctgttgttgagtatgctg 354  Q
    ||||| ||||| || ||||| ||||| |||||| |||||| ||||||||| |||||||||||| ||||||||||||| ||||||||    || || ||||    
T  17189770 gaattcctgaatagatactttccggaggatgtcagaggtaagaaggagattgaatttctggagctgaagcagggtgacatgtctgtcacagaatacgctg 17189671  T
Q  355 caaaatttgtggagcttgcaaagttctacccccattatgctccggagacagctgaatt 412  Q
    | || |||||||| ||||| ||||||||||| || ||| || |||||| |||||||||    
T  17189670 cgaagtttgtggaacttgctaagttctaccctcactatactgcggagagagctgaatt 17189613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 255 - 409
Target Start/End: Original strand, 12357260 - 12357414
Alignment:
Q  255 gaatttctgaacaggtacttcccggaagatgtccgaggtaggaaggagatcgaatttctggagttgaagcagggtgatatgtctgttgttgagtatgctg 354  Q
    ||||| ||||| |||||||||||||| ||||||| ||| | |||||||||  ||||||||||| |||||||| |||| |||| ||||   || || ||||    
T  12357260 gaattcctgaataggtacttcccggaggatgtccaaggaaagaaggagattaaatttctggagctgaagcagagtgacatgtatgttacagaatacgctg 12357359  T
Q  355 caaaatttgtggagcttgcaaagttctacccccattatgctccggagacagctga 409  Q
    | || |||||||| |||||||||||||||||||| ||| |  |||||||| ||||    
T  12357360 ctaagtttgtggaacttgcaaagttctacccccactataccgcggagacaactga 12357414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 255 - 409
Target Start/End: Original strand, 14290265 - 14290419
Alignment:
Q  255 gaatttctgaacaggtacttcccggaagatgtccgaggtaggaaggagatcgaatttctggagttgaagcagggtgatatgtctgttgttgagtatgctg 354  Q
    ||||||||||||| ||| || ||| | ||||||||||||| ||| ||||| || ||||| || ||||||||||| |||||||| ||   |||||||||||    
T  14290265 gaatttctgaacaagtattttccgaaggatgtccgaggtaagaaagagattgagtttcttgaattgaagcagggggatatgtcggtaactgagtatgctg 14290364  T
Q  355 caaaatttgtggagcttgcaaagttctacccccattatgctccggagacagctga 409  Q
    | || ||||||||||||||||| ||||| || || ||  || |||||||||||||    
T  14290365 ctaagtttgtggagcttgcaaaattctatccacactacactgcggagacagctga 14290419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 255 - 409
Target Start/End: Original strand, 16825012 - 16825166
Alignment:
Q  255 gaatttctgaacaggtacttcccggaagatgtccgaggtaggaaggagatcgaatttctggagttgaagcagggtgatatgtctgttgttgagtatgctg 354  Q
    ||||| ||||| |||||||| ||||| ||||||||||| |  |||||||| || ||| |||||||||| ||||| |||||||||||    |||||||| |    
T  16825012 gaattcctgaataggtactttccggaggatgtccgaggcaaaaaggagattgagtttttggagttgaaacagggggatatgtctgtaacagagtatgcag 16825111  T
Q  355 caaaatttgtggagcttgcaaagttctacccccattatgctccggagacagctga 409  Q
    | || |||||||||||||||||||| || || |||||| || ||||||| |||||    
T  16825112 ctaagtttgtggagcttgcaaagttttatcctcattatactgcggagactgctga 16825166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 255 - 409
Target Start/End: Complemental strand, 35983577 - 35983423
Alignment:
Q  255 gaatttctgaacaggtacttcccggaagatgtccgaggtaggaaggagatcgaatttctggagttgaagcagggtgatatgtctgttgttgagtatgctg 354  Q
    ||||| ||||||||||| || ||||| ||||||||||||| |||||| ||||| ||||| ||  |||| || ||||||||||| ||   |||||||||||    
T  35983577 gaattcctgaacaggtattttccggaggatgtccgaggtaagaaggaaatcgagtttcttgaactgaaacaaggtgatatgtcggtaactgagtatgctg 35983478  T
Q  355 caaaatttgtggagcttgcaaagttctacccccattatgctccggagacagctga 409  Q
    | || ||||||||||||||||| || || || || ||| || |||||||||||||    
T  35983477 ctaagtttgtggagcttgcaaaattttatccacactatactgcggagacagctga 35983423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 267 - 379
Target Start/End: Original strand, 2245417 - 2245529
Alignment:
Q  267 aggtacttcccggaagatgtccgaggtaggaaggagatcgaatttctggagttgaagcagggtgatatgtctgttgttgagtatgctgcaaaatttgtgg 366  Q
    ||||||||||||||||||||| |||||| ||| || || |||||||||||| |||| |||||||||||||| ||    || ||||||||||| |||||||    
T  2245417 aggtacttcccggaagatgtcagaggtaagaaagaaatagaatttctggagctgaaacagggtgatatgtcagtaacagaatatgctgcaaagtttgtgg 2245516  T
Q  367 agcttgcaaagtt 379  Q
    ||||||| |||||    
T  2245517 agcttgctaagtt 2245529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 256 - 412
Target Start/End: Complemental strand, 24190698 - 24190542
Alignment:
Q  256 aatttctgaacaggtacttcccggaagatgtccgaggtaggaaggagatcgaatttctggagttgaagcagggtgatatgtctgttgttgagtatgctgc 355  Q
    |||| ||||| || ||||| ||||| |||||| |||||| |||||||||  |||||||| || ||||||||||||| ||||||||    || || |||||    
T  24190698 aattcctgaatagatactttccggaggatgtcagaggtaagaaggagattaaatttctgaagctgaagcagggtgacatgtctgtcacagaatacgctgc 24190599  T
Q  356 aaaatttgtggagcttgcaaagttctacccccattatgctccggagacagctgaatt 412  Q
     || |||||||| ||||| ||||||||||| || ||| || ||||||||||||||||    
T  24190598 gaagtttgtggaacttgctaagttctaccctcactatactgcggagacagctgaatt 24190542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 282 - 373
Target Start/End: Complemental strand, 10409337 - 10409246
Alignment:
Q  282 gatgtccgaggtaggaaggagatcgaatttctggagttgaagcagggtgatatgtctgttgttgagtatgctgcaaaatttgtggagcttgc 373  Q
    |||||| |||||| ||| ||||| |||||||||||||||||||||||||| ||||||||    |||||||||||||| ||||||||||||||    
T  10409337 gatgtcagaggtaagaaagagattgaatttctggagttgaagcagggtgacatgtctgtcacagagtatgctgcaaagtttgtggagcttgc 10409246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 282 - 409
Target Start/End: Complemental strand, 28757688 - 28757561
Alignment:
Q  282 gatgtccgaggtaggaaggagatcgaatttctggagttgaagcagggtgatatgtctgttgttgagtatgctgcaaaatttgtggagcttgcaaagttct 381  Q
    |||||| |||||| ||||||||| ||||||||||||||||| |||||||| ||||||||    ||||||||||| || |||||||||||||| |  ||||    
T  28757688 gatgtcagaggtaagaaggagattgaatttctggagttgaaacagggtgacatgtctgtcacagagtatgctgctaagtttgtggagcttgccacattct 28757589  T
Q  382 acccccattatgctccggagacagctga 409  Q
    |||| |||||   | |||||||||||||    
T  28757588 accctcattacagtgcggagacagctga 28757561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 282 - 373
Target Start/End: Complemental strand, 47127313 - 47127222
Alignment:
Q  282 gatgtccgaggtaggaaggagatcgaatttctggagttgaagcagggtgatatgtctgttgttgagtatgctgcaaaatttgtggagcttgc 373  Q
    |||||| |||||| ||||||||| ||||||||||||||||| |||||||| ||||||||    |||||||||||||| ||||||||||||||    
T  47127313 gatgtcagaggtaagaaggagatagaatttctggagttgaaacagggtgacatgtctgtcacagagtatgctgcaaagtttgtggagcttgc 47127222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 255 - 391
Target Start/End: Original strand, 2036645 - 2036781
Alignment:
Q  255 gaatttctgaacaggtacttcccggaagatgtccgaggtaggaaggagatcgaatttctggagttgaagcagggtgatatgtctgttgttgagtatgctg 354  Q
    ||||| ||||| ||||| || ||||| ||||||||||| |  ||||| || |||||||||||| |||| ||||| |||||||| |||   ||||||||||    
T  2036645 gaattcctgaataggtattttccggaggatgtccgagggaaaaaggaaattgaatttctggagctgaaacagggggatatgtcagttacggagtatgctg 2036744  T
Q  355 caaaatttgtggagcttgcaaagttctacccccatta 391  Q
    | || |||||||| ||||| ||||||||||| |||||    
T  2036745 ctaagtttgtggaacttgctaagttctaccctcatta 2036781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 255 - 391
Target Start/End: Original strand, 2040386 - 2040522
Alignment:
Q  255 gaatttctgaacaggtacttcccggaagatgtccgaggtaggaaggagatcgaatttctggagttgaagcagggtgatatgtctgttgttgagtatgctg 354  Q
    ||||| ||||| ||||| || ||||| ||||||||||| |  ||||| || |||||||||||| |||| ||||| |||||||| |||   ||||||||||    
T  2040386 gaattcctgaataggtattttccggaggatgtccgagggaaaaaggaaattgaatttctggagctgaaacagggggatatgtcagttacggagtatgctg 2040485  T
Q  355 caaaatttgtggagcttgcaaagttctacccccatta 391  Q
    | || |||||||| ||||| ||||||||||| |||||    
T  2040486 ctaagtttgtggaacttgctaagttctaccctcatta 2040522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 255 - 391
Target Start/End: Complemental strand, 14040142 - 14040006
Alignment:
Q  255 gaatttctgaacaggtacttcccggaagatgtccgaggtaggaaggagatcgaatttctggagttgaagcagggtgatatgtctgttgttgagtatgctg 354  Q
    ||||| ||||| ||||| || ||||| ||||||||||| |  ||||| || |||||||||||| |||| ||||| |||||||| |||   ||||||||||    
T  14040142 gaattcctgaataggtattttccggaggatgtccgagggaaaaaggaaattgaatttctggagctgaaacagggggatatgtcagttacggagtatgctg 14040043  T
Q  355 caaaatttgtggagcttgcaaagttctacccccatta 391  Q
    | || |||||||| ||||| ||||||||||| |||||    
T  14040042 ctaagtttgtggaacttgctaagttctaccctcatta 14040006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 264 - 376
Target Start/End: Complemental strand, 15230990 - 15230878
Alignment:
Q  264 aacaggtacttcccggaagatgtccgaggtaggaaggagatcgaatttctggagttgaagcagggtgatatgtctgttgttgagtatgctgcaaaatttg 363  Q
    ||||||||||| || |||||||||||||| ||||| || ||||| ||||| || ||||| || || |||||||||||   |||||||||| | || ||||    
T  15230990 aacaggtactttccagaagatgtccgaggaaggaaagaaatcgagtttcttgaattgaaacatggagatatgtctgtaactgagtatgcttctaagtttg 15230891  T
Q  364 tggagcttgcaaa 376  Q
    |||||||||||||    
T  15230890 tggagcttgcaaa 15230878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 264 - 376
Target Start/End: Complemental strand, 15236858 - 15236746
Alignment:
Q  264 aacaggtacttcccggaagatgtccgaggtaggaaggagatcgaatttctggagttgaagcagggtgatatgtctgttgttgagtatgctgcaaaatttg 363  Q
    ||||||||||| || |||||||||||||| ||||| || ||||| ||||| || ||||| || || |||||||||||   |||||||||| | || ||||    
T  15236858 aacaggtactttccagaagatgtccgaggaaggaaagaaatcgagtttcttgaattgaaacatggagatatgtctgtaactgagtatgcttctaagtttg 15236759  T
Q  364 tggagcttgcaaa 376  Q
    |||||||||||||    
T  15236758 tggagcttgcaaa 15236746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 255 - 337
Target Start/End: Original strand, 10416778 - 10416860
Alignment:
Q  255 gaatttctgaacaggtacttcccggaagatgtccgaggtaggaaggagatcgaatttctggagttgaagcagggtgatatgtc 337  Q
    ||||| ||||| || ||||| || |||||||||||||| | ||| || || ||||||||||||||||| |||||||| |||||    
T  10416778 gaattcctgaatagatactttccagaagatgtccgagggaagaaagaaatagaatttctggagttgaaacagggtgacatgtc 10416860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 258 - 340
Target Start/End: Original strand, 12857241 - 12857323
Alignment:
Q  258 tttctgaacaggtacttcccggaagatgtccgaggtaggaaggagatcgaatttctggagttgaagcagggtgatatgtctgt 340  Q
    |||||||||||||| || || || ||||||||||||| |||  | |  |||||| |||||||||||||||| |||||||||||    
T  12857241 tttctgaacaggtattttccagaggatgtccgaggtaagaaataaaatgaatttttggagttgaagcagggagatatgtctgt 12857323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 265 - 385
Target Start/End: Complemental strand, 19728135 - 19728015
Alignment:
Q  265 acaggtacttcccggaagatgtccgaggtaggaaggagatcgaatttctggagttgaagcagggtgatatgtctgttgttgagtatgctgcaaaatttgt 364  Q
    |||| ||||| ||||||||||| || || | ||| ||||| || || || ||| ||||||| ||  ||||||| ||   |||||||||||||||||||||    
T  19728135 acagatactttccggaagatgttcgcgggaagaaagagattgagttccttgagctgaagcaaggaaatatgtcagtaactgagtatgctgcaaaatttgt 19728036  T
Q  365 ggagcttgcaaagttctaccc 385  Q
    |||||| || ||||| |||||    
T  19728035 ggagctggctaagttttaccc 19728015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 270 - 385
Target Start/End: Complemental strand, 6597423 - 6597308
Alignment:
Q  270 tacttcccggaagatgtccgaggtaggaaggagatcgaatttctggagttgaagcagggtgatatgtctgttgttgagtatgctgcaaaatttgtggagc 369  Q
    ||||| ||||||||||| || || | ||||||||||||||| || ||| ||||||| ||  ||||||||||    ||||||||||| || || |||||||    
T  6597423 tactttccggaagatgttcgcgggaagaaggagatcgaattccttgagctgaagcaaggaaatatgtctgtgacagagtatgctgccaagttcgtggagc 6597324  T
Q  370 ttgcaaagttctaccc 385  Q
    |  | |||||||||||    
T  6597323 tgtcgaagttctaccc 6597308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 270 - 385
Target Start/End: Complemental strand, 6604103 - 6603988
Alignment:
Q  270 tacttcccggaagatgtccgaggtaggaaggagatcgaatttctggagttgaagcagggtgatatgtctgttgttgagtatgctgcaaaatttgtggagc 369  Q
    ||||| ||||||||||| || || | ||||||||||||||| || ||| ||||||| ||  ||||||||||    ||||||||||| || || |||||||    
T  6604103 tactttccggaagatgttcgcgggaagaaggagatcgaattccttgagctgaagcaaggaaatatgtctgtgacagagtatgctgccaagttcgtggagc 6604004  T
Q  370 ttgcaaagttctaccc 385  Q
    |  | |||||||||||    
T  6604003 tgtcgaagttctaccc 6603988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 270 - 385
Target Start/End: Complemental strand, 16695535 - 16695420
Alignment:
Q  270 tacttcccggaagatgtccgaggtaggaaggagatcgaatttctggagttgaagcagggtgatatgtctgttgttgagtatgctgcaaaatttgtggagc 369  Q
    ||||| ||||||||||| || || | |||||||||||| || || ||| ||||||| ||  |||||| |||   |||||||||||| |  |||||||||     
T  16695535 tactttccggaagatgttcgcgggaagaaggagatcgagttccttgagctgaagcaaggaaatatgtttgtaactgagtatgctgccatgtttgtggagt 16695436  T
Q  370 ttgcaaagttctaccc 385  Q
    | ||||||||||||||    
T  16695435 tggcaaagttctaccc 16695420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 345 - 409
Target Start/End: Original strand, 23414624 - 23414688
Alignment:
Q  345 gagtatgctgcaaaatttgtggagcttgcaaagttctacccccattatgctccggagacagctga 409  Q
    ||||||||||| |||||||||||| | ||||||||||| || || |||||| | ||||| |||||    
T  23414624 gagtatgctgccaaatttgtggagttggcaaagttctatccgcactatgctgctgagactgctga 23414688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 270 - 382
Target Start/End: Original strand, 53381781 - 53381893
Alignment:
Q  270 tacttcccggaagatgtccgaggtaggaaggagatcgaatttctggagttgaagcagggtgatatgtctgttgttgagtatgctgcaaaatttgtggagc 369  Q
    ||||| ||||||||||| || || | ||||||||||||||| || ||| ||||||| ||  ||||||||||    ||||||||||| || || ||||| |    
T  53381781 tactttccggaagatgttcgcggaaagaaggagatcgaattccttgagctgaagcaaggaaatatgtctgtgacagagtatgctgccaagttcgtggaac 53381880  T
Q  370 ttgcaaagttcta 382  Q
    |  ||||||||||    
T  53381881 tgtcaaagttcta 53381893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1914 (Bit Score: 130; Significance: 3e-67; HSPs: 1)
Name: scaffold1914
Description:

Target: scaffold1914; HSP #1
Raw Score: 130; E-Value: 3e-67
Query Start/End: Original strand, 255 - 412
Target Start/End: Original strand, 738 - 895
Alignment:
Q  255 gaatttctgaacaggtacttcccggaagatgtccgaggtaggaaggagatcgaatttctggagttgaagcagggtgatatgtctgttgttgagtatgctg 354  Q
    ||||||||||| ||||| |||||||||||||||||||||| ||||||||| ||||| ||||| |||||||||||||||||||| ||||||||||||||||    
T  738 gaatttctgaataggtaattcccggaagatgtccgaggtaagaaggagattgaattcctggaattgaagcagggtgatatgtcagttgttgagtatgctg 837  T
Q  355 caaaatttgtggagcttgcaaagttctacccccattatgctccggagacagctgaatt 412  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  838 caaaatttgtggagcttgcaaagttctacccccattatgctccggagacagctgaatt 895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 130; Significance: 3e-67; HSPs: 27)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 130; E-Value: 3e-67
Query Start/End: Original strand, 255 - 412
Target Start/End: Original strand, 18050445 - 18050602
Alignment:
Q  255 gaatttctgaacaggtacttcccggaagatgtccgaggtaggaaggagatcgaatttctggagttgaagcagggtgatatgtctgttgttgagtatgctg 354  Q
    ||||||||||| || ||||||||||||||||||||||||||||||||||| || || ||||| |||||||||||||||||||||||||||||||||||||    
T  18050445 gaatttctgaatagatacttcccggaagatgtccgaggtaggaaggagattgagttcctggaattgaagcagggtgatatgtctgttgttgagtatgctg 18050544  T
Q  355 caaaatttgtggagcttgcaaagttctacccccattatgctccggagacagctgaatt 412  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  18050545 caaaatttgtggagcttgcaaagttctatccccattatgctccggagacagctgaatt 18050602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 114; E-Value: 1e-57
Query Start/End: Original strand, 255 - 412
Target Start/End: Complemental strand, 14145418 - 14145261
Alignment:
Q  255 gaatttctgaacaggtacttcccggaagatgtccgaggtaggaaggagatcgaatttctggagttgaagcagggtgatatgtctgttgttgagtatgctg 354  Q
    |||||||||||||||||||| ||||||||||||||||| ||||| |||||||||||| ||||| ||||||||||||||||||||||||||||||||||||    
T  14145418 gaatttctgaacaggtactttccggaagatgtccgaggaaggaaagagatcgaatttttggagctgaagcagggtgatatgtctgttgttgagtatgctg 14145319  T
Q  355 caaaatttgtggagcttgcaaagttctacccccattatgctccggagacagctgaatt 412  Q
    |||| |||||||| ||||||||||| |||||||| ||| || ||||||||||||||||    
T  14145318 caaagtttgtggaacttgcaaagttatacccccaatatactgcggagacagctgaatt 14145261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 98; E-Value: 4e-48
Query Start/End: Original strand, 255 - 412
Target Start/End: Original strand, 14282866 - 14283023
Alignment:
Q  255 gaatttctgaacaggtacttcccggaagatgtccgaggtaggaaggagatcgaatttctggagttgaagcagggtgatatgtctgttgttgagtatgctg 354  Q
    |||||||||||||||||||| || |||||||||||||||||||| ||||| |||||||| ||| ||||||||||||||||||||||||||||||||| ||    
T  14282866 gaatttctgaacaggtactttccagaagatgtccgaggtaggaaagagattgaatttctagagctgaagcagggtgatatgtctgttgttgagtatgttg 14282965  T
Q  355 caaaatttgtggagcttgcaaagttctacccccattatgctccggagacagctgaatt 412  Q
    |||| |||||||| ||||||||||||||||| ||  || |  ||||||||||||||||    
T  14282966 caaagtttgtggaacttgcaaagttctaccctcacaataccgcggagacagctgaatt 14283023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 69; E-Value: 8e-31
Query Start/End: Original strand, 255 - 403
Target Start/End: Original strand, 15099215 - 15099363
Alignment:
Q  255 gaatttctgaacaggtacttcccggaagatgtccgaggtaggaaggagatcgaatttctggagttgaagcagggtgatatgtctgttgttgagtatgctg 354  Q
    ||||| ||||| |||||||| ||||| ||||||||||||| |||| |||| |||||||||||| |||| ||||| ||||||||||||   ||||||||||    
T  15099215 gaattcctgaataggtactttccggaggatgtccgaggtaagaagaagattgaatttctggagctgaaacagggggatatgtctgttacggagtatgctg 15099314  T
Q  355 caaaatttgtggagcttgcaaagttctacccccattatgctccggagac 403  Q
    | || |||||||| ||||| ||||||||||| |||||| || |||||||    
T  15099315 cgaagtttgtggaacttgctaagttctaccctcattatactgcggagac 15099363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 258 - 409
Target Start/End: Complemental strand, 13025098 - 13024947
Alignment:
Q  258 tttctgaacaggtacttcccggaagatgtccgaggtaggaaggagatcgaatttctggagttgaagcagggtgatatgtctgttgttgagtatgctgcaa 357  Q
    |||||||  ||||| |||||||||||||||||||||| |||||| || ||||||||||| ||||| |||||||||||||| |||  ||| |||||||| |    
T  13025098 tttctgagtaggtatttcccggaagatgtccgaggtaagaaggaaattgaatttctggaattgaaacagggtgatatgtccgttactgattatgctgcta 13024999  T
Q  358 aatttgtggagcttgcaaagttctacccccattatgctccggagacagctga 409  Q
    | || ||||| ||||| |||||||||||||||||   | |||||||||||||    
T  13024998 agttcgtggaacttgctaagttctacccccattacagtgcggagacagctga 13024947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 258 - 409
Target Start/End: Complemental strand, 15810960 - 15810809
Alignment:
Q  258 tttctgaacaggtacttcccggaagatgtccgaggtaggaaggagatcgaatttctggagttgaagcagggtgatatgtctgttgttgagtatgctgcaa 357  Q
    |||||||  |||||||| |||||||||||| |||||| |||||| || ||||||||||| ||||| |||||||||||||| |||  ||| |||||||| |    
T  15810960 tttctgagtaggtactttccggaagatgtctgaggtaagaaggaaattgaatttctggaattgaaacagggtgatatgtccgttactgattatgctgcta 15810861  T
Q  358 aatttgtggagcttgcaaagttctacccccattatgctccggagacagctga 409  Q
    | || ||||| ||||| |||||||||||||||||   | |||||||||||||    
T  15810860 agttcgtggaacttgctaagttctacccccattacagtgcggagacagctga 15810809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 267 - 409
Target Start/End: Original strand, 16946976 - 16947118
Alignment:
Q  267 aggtacttcccggaagatgtccgaggtaggaaggagatcgaatttctggagttgaagcagggtgatatgtctgttgttgagtatgctgcaaaatttgtgg 366  Q
    |||||||||||||||||||||||||||| ||| || || || |||||||| ||||||||||  ||||||||||||   |||||||||||||| || ||||    
T  16946976 aggtacttcccggaagatgtccgaggtaagaaagaaattgagtttctggaattgaagcaggaagatatgtctgttacggagtatgctgcaaagttcgtgg 16947075  T
Q  367 agcttgcaaagttctacccccattatgctccggagacagctga 409  Q
    | ||| | |||||||||||||||||   | |||||||||||||    
T  16947076 aactttctaagttctacccccattacagtgcggagacagctga 16947118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 282 - 409
Target Start/End: Original strand, 40924336 - 40924463
Alignment:
Q  282 gatgtccgaggtaggaaggagatcgaatttctggagttgaagcagggtgatatgtctgttgttgagtatgctgcaaaatttgtggagcttgcaaagttct 381  Q
    |||||| |||||| ||||||||| ||||||||||||||||| |||||||| ||||||||    |||||||||||||| |||||||||||||| |  ||||    
T  40924336 gatgtcagaggtaagaaggagattgaatttctggagttgaaacagggtgacatgtctgtcacagagtatgctgcaaagtttgtggagcttgccacattct 40924435  T
Q  382 acccccattatgctccggagacagctga 409  Q
    |||| ||||||  | |||||||||||||    
T  40924436 accctcattatagtgcggagacagctga 40924463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 267 - 409
Target Start/End: Original strand, 13965172 - 13965314
Alignment:
Q  267 aggtacttcccggaagatgtccgaggtaggaaggagatcgaatttctggagttgaagcagggtgatatgtctgttgttgagtatgctgcaaaatttgtgg 366  Q
    ||||||||||||||||||||||| || | ||| ||||| || ||||||||||||||||||||||| ||||||||    |||||||||||||| |||||||    
T  13965172 aggtacttcccggaagatgtccggggaaagaaagagattgagtttctggagttgaagcagggtgacatgtctgtcacagagtatgctgcaaagtttgtgg 13965271  T
Q  367 agcttgcaaagttctacccccattatgctccggagacagctga 409  Q
    | ||||| |  |||||||| |||||   | |||||||||||||    
T  13965272 aacttgccacattctaccctcattacagtgcggagacagctga 13965314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 255 - 412
Target Start/End: Original strand, 11384921 - 11385078
Alignment:
Q  255 gaatttctgaacaggtacttcccggaagatgtccgaggtaggaaggagatcgaatttctggagttgaagcagggtgatatgtctgttgttgagtatgctg 354  Q
    ||||| ||||| ||||| || |||||||||||||| |||| |||||| ||||| |||||||||||||| || ||||| ||||||||    ||||||||||    
T  11384921 gaattcctgaataggtattttccggaagatgtccgtggtaagaaggaaatcgagtttctggagttgaaacaaggtgacatgtctgtcacagagtatgctg 11385020  T
Q  355 caaaatttgtggagcttgcaaagttctacccccattatgctccggagacagctgaatt 412  Q
    | || || ||||| || || ||||||||||| || ||| || ||||||||||||||||    
T  11385021 cgaagttcgtggaactagctaagttctaccctcagtatactgcggagacagctgaatt 11385078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 306 - 409
Target Start/End: Complemental strand, 13677151 - 13677048
Alignment:
Q  306 gaatttctggagttgaagcagggtgatatgtctgttgttgagtatgctgcaaaatttgtggagcttgcaaagttctacccccattatgctccggagacag 405  Q
    |||||||||||| ||||||||||||||||||| |||   || |||||||| || |||||||| |||||||||||||||||||| ||| |  |||||||||    
T  13677151 gaatttctggagctgaagcagggtgatatgtcagttacagaatatgctgctaagtttgtggaacttgcaaagttctacccccactataccgcggagacag 13677052  T
Q  406 ctga 409  Q
    ||||    
T  13677051 ctga 13677048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 282 - 409
Target Start/End: Original strand, 26115109 - 26115236
Alignment:
Q  282 gatgtccgaggtaggaaggagatcgaatttctggagttgaagcagggtgatatgtctgttgttgagtatgctgcaaaatttgtggagcttgcaaagttct 381  Q
    |||||| |||||| ||| ||||| ||||||||||||||||| |||||||| ||||||||    |||||||||||||| |||||||||||||| |  ||||    
T  26115109 gatgtcagaggtaagaaagagattgaatttctggagttgaaacagggtgacatgtctgtcacagagtatgctgcaaagtttgtggagcttgccacattct 26115208  T
Q  382 acccccattatgctccggagacagctga 409  Q
    |||| |||||   | |||||||||||||    
T  26115209 accctcattacagtgcggagacagctga 26115236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 282 - 409
Target Start/End: Complemental strand, 49156031 - 49155904
Alignment:
Q  282 gatgtccgaggtaggaaggagatcgaatttctggagttgaagcagggtgatatgtctgttgttgagtatgctgcaaaatttgtggagcttgcaaagttct 381  Q
    |||||| |||| | ||||||||| ||||||||||||||||| |||||||| ||||||||    |||||||||||||| |||||||||||||| |  ||||    
T  49156031 gatgtcagagggaagaaggagatagaatttctggagttgaaacagggtgacatgtctgtcacagagtatgctgcaaagtttgtggagcttgccacattct 49155932  T
Q  382 acccccattatgctccggagacagctga 409  Q
    |||| |||||   | |||||||||||||    
T  49155931 accctcattacagtgcggagacagctga 49155904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 255 - 409
Target Start/End: Original strand, 12797997 - 12798150
Alignment:
Q  255 gaatttctgaacaggtacttcccggaagatgtccgaggtaggaaggagatcgaatttctggagttgaagcagggtgatatgtctgttgttgagtatgctg 354  Q
    ||||| ||||| ||||| || ||||||||||||||||| || ||| |||| |||||| | |||||||| ||||| |||||||||||   ||||||||| |    
T  12797997 gaattcctgaataggtattttccggaagatgtccgaggaagaaag-agattgaatttatagagttgaaacagggggatatgtctgtaactgagtatgcag 12798095  T
Q  355 caaaatttgtggagcttgcaaagttctacccccattatgctccggagacagctga 409  Q
    | || ||||| |||||||||||||| || ||  ||||| || |||||||||||||    
T  12798096 ctaagtttgtagagcttgcaaagttttatccttattatactgcggagacagctga 12798150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 267 - 391
Target Start/End: Complemental strand, 12460373 - 12460249
Alignment:
Q  267 aggtacttcccggaagatgtccgaggtaggaaggagatcgaatttctggagttgaagcagggtgatatgtctgttgttgagtatgctgcaaaatttgtgg 366  Q
    ||||| |||||||||||||||||||||| ||| || || || |||||||| ||||| |||||||||||||| |||    |||||||||| || || ||||    
T  12460373 aggtatttcccggaagatgtccgaggtaagaaagaaattgagtttctggaattgaaacagggtgatatgtccgttacgcagtatgctgctaagttcgtgg 12460274  T
Q  367 agcttgcaaagttctacccccatta 391  Q
    | ||||| ||||||||||| |||||    
T  12460273 aacttgctaagttctaccctcatta 12460249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 261 - 376
Target Start/End: Original strand, 12203298 - 12203413
Alignment:
Q  261 ctgaacaggtacttcccggaagatgtccgaggtaggaaggagatcgaatttctggagttgaagcagggtgatatgtctgttgttgagtatgctgcaaaat 360  Q
    ||||||||||||||  | |||||||||||||| ||||| || ||||| ||||| || ||||| ||||| ||||| |||||   |||||||||||| || |    
T  12203298 ctgaacaggtacttttcagaagatgtccgaggaaggaaagaaatcgagtttcttgaattgaaacagggagatatatctgtaactgagtatgctgctaagt 12203397  T
Q  361 ttgtggagcttgcaaa 376  Q
    ||||||||||||||||    
T  12203398 ttgtggagcttgcaaa 12203413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 282 - 373
Target Start/End: Original strand, 26091317 - 26091408
Alignment:
Q  282 gatgtccgaggtaggaaggagatcgaatttctggagttgaagcagggtgatatgtctgttgttgagtatgctgcaaaatttgtggagcttgc 373  Q
    |||||| |||||| ||| ||||| ||||||||||||||||| |||||||| ||||||||    |||||||||||||| ||||||||||||||    
T  26091317 gatgtcagaggtaagaaagagattgaatttctggagttgaaacagggtgacatgtctgtcacagagtatgctgcaaagtttgtggagcttgc 26091408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 255 - 409
Target Start/End: Original strand, 14260738 - 14260892
Alignment:
Q  255 gaatttctgaacaggtacttcccggaagatgtccgaggtaggaaggagatcgaatttctggagttgaagcagggtgatatgtctgttgttgagtatgctg 354  Q
    ||||||||||| ||||| || | ||| ||||||||||||| ||||||||| || |||||||| ||||| ||||| || ||||||||    ||||||||||    
T  14260738 gaatttctgaataggtattttctggaggatgtccgaggtaagaaggagattgagtttctggaattgaaacagggggacatgtctgtgacggagtatgctg 14260837  T
Q  355 caaaatttgtggagcttgcaaagttctacccccattatgctccggagacagctga 409  Q
    | |  |||||||| || || |||||||| || || ||| || ||||||| |||||    
T  14260838 cgaggtttgtggaactcgctaagttctatcctcactatactgcggagactgctga 14260892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 282 - 367
Target Start/End: Complemental strand, 11877866 - 11877781
Alignment:
Q  282 gatgtccgaggtaggaaggagatcgaatttctggagttgaagcagggtgatatgtctgttgttgagtatgctgcaaaatttgtgga 367  Q
    |||||| |||||| ||| ||||| ||||||||||||||||| |||||||| ||||||||    |||||||||||||| ||||||||    
T  11877866 gatgtcagaggtaagaaagagattgaatttctggagttgaaacagggtgacatgtctgtcacagagtatgctgcaaagtttgtgga 11877781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 255 - 409
Target Start/End: Complemental strand, 19150768 - 19150614
Alignment:
Q  255 gaatttctgaacaggtacttcccggaagatgtccgaggtaggaaggagatcgaatttctggagttgaagcagggtgatatgtctgttgttgagtatgctg 354  Q
    ||||||||||| ||||| |||||||| ||||||||||||| |||||| || || ||||| || ||||| ||||| || ||||||||     |||||||||    
T  19150768 gaatttctgaataggtatttcccggaggatgtccgaggtaagaaggaaattgagtttctagaattgaaacagggggacatgtctgtgacaaagtatgctg 19150669  T
Q  355 caaaatttgtggagcttgcaaagttctacccccattatgctccggagacagctga 409  Q
    | |  |||||||| || || |||||||| || || ||| || ||||||| |||||    
T  19150668 cgaggtttgtggaactcgctaagttctatcctcactatactgcggagactgctga 19150614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 255 - 409
Target Start/End: Complemental strand, 20750167 - 20750013
Alignment:
Q  255 gaatttctgaacaggtacttcccggaagatgtccgaggtaggaaggagatcgaatttctggagttgaagcagggtgatatgtctgttgttgagtatgctg 354  Q
    ||||||||||| ||||| |||||||| ||||||||||||| |||||| || || ||||| || ||||| ||||| || ||||||||     |||||||||    
T  20750167 gaatttctgaataggtatttcccggaggatgtccgaggtaagaaggaaattgagtttctagaattgaaacagggggacatgtctgtgacaaagtatgctg 20750068  T
Q  355 caaaatttgtggagcttgcaaagttctacccccattatgctccggagacagctga 409  Q
    | |  |||||||| || || |||||||| || || ||| || ||||||| |||||    
T  20750067 cgaggtttgtggaactcgctaagttctatcctcactatactgcggagactgctga 20750013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 282 - 391
Target Start/End: Complemental strand, 21756142 - 21756033
Alignment:
Q  282 gatgtccgaggtaggaaggagatcgaatttctggagttgaagcagggtgatatgtctgttgttgagtatgctgcaaaatttgtggagcttgcaaagttct 381  Q
    |||||| |||||| ||| || || || ||||| ||| |||| |||||||||||||| |||   |||||||||||||| |||||||| ||||| | |||||    
T  21756142 gatgtcagaggtaagaaagaaattgagtttctagagctgaaacagggtgatatgtccgtttcggagtatgctgcaaagtttgtggaacttgctacgttct 21756043  T
Q  382 acccccatta 391  Q
    | || |||||    
T  21756042 atcctcatta 21756033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 270 - 385
Target Start/End: Complemental strand, 10874190 - 10874075
Alignment:
Q  270 tacttcccggaagatgtccgaggtaggaaggagatcgaatttctggagttgaagcagggtgatatgtctgttgttgagtatgctgcaaaatttgtggagc 369  Q
    ||||| ||||||||||| || || | ||||||||||||||| || ||| ||||||| ||  ||||||||||    ||||||||||| || || |||||||    
T  10874190 tactttccggaagatgttcgcgggaagaaggagatcgaattccttgagctgaagcaaggaaatatgtctgtgacagagtatgctgccaagttcgtggagc 10874091  T
Q  370 ttgcaaagttctaccc 385  Q
    |  | |||||||||||    
T  10874090 tgtcgaagttctaccc 10874075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 345 - 412
Target Start/End: Complemental strand, 11984658 - 11984591
Alignment:
Q  345 gagtatgctgcaaaatttgtggagcttgcaaagttctacccccattatgctccggagacagctgaatt 412  Q
    ||||||||||| || ||||||||| | |||||||||||||| || |||||| | ||||| ||||||||    
T  11984658 gagtatgctgccaagtttgtggagttggcaaagttctacccgcactatgctgctgagactgctgaatt 11984591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 270 - 385
Target Start/End: Complemental strand, 18181480 - 18181365
Alignment:
Q  270 tacttcccggaagatgtccgaggtaggaaggagatcgaatttctggagttgaagcagggtgatatgtctgttgttgagtatgctgcaaaatttgtggagc 369  Q
    ||||| ||||||||||| || || | |||| |||||||||| || ||| ||||||| ||  ||||||||||    ||||||||||| || || |||||||    
T  18181480 tactttccggaagatgttcgcgggaagaagtagatcgaattccttgagctgaagcaaggaaatatgtctgtgacagagtatgctgccaagttcgtggagc 18181381  T
Q  370 ttgcaaagttctaccc 385  Q
    |  |||||||||||||    
T  18181380 tgtcaaagttctaccc 18181365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 270 - 395
Target Start/End: Original strand, 17702993 - 17703118
Alignment:
Q  270 tacttcccggaagatgtccgaggtaggaaggagatcgaatttctggagttgaagcagggtgatatgtctgttgttgagtatgctgcaaaatttgtggagc 369  Q
    ||||| ||||||||||| || || | |||||||||||| || || ||| ||||||| ||  | ||||||||    ||||||||||| || || ||||||     
T  17702993 tactttccggaagatgttcgcgggaagaaggagatcgagttccttgagctgaagcaaggaaacatgtctgtgacagagtatgctgccaagttcgtggagt 17703092  T
Q  370 ttgcaaagttctacccccattatgct 395  Q
    | |||||||||||||| || ||||||    
T  17703093 tggcaaagttctacccacactatgct 17703118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 270 - 379
Target Start/End: Original strand, 48810622 - 48810731
Alignment:
Q  270 tacttcccggaagatgtccgaggtaggaaggagatcgaatttctggagttgaagcagggtgatatgtctgttgttgagtatgctgcaaaatttgtggagc 369  Q
    ||||| ||||||||||| || || | ||| ||||| || || || ||| ||||||||||||| ||||| ||    |||||||||||||| ||||||||||    
T  48810622 tactttccggaagatgttcgtgggaagaaagagattgagttccttgagctgaagcagggtgacatgtcggtgaccgagtatgctgcaaagtttgtggagc 48810721  T
Q  370 ttgcaaagtt 379  Q
    | || |||||    
T  48810722 tggctaagtt 48810731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 130; Significance: 3e-67; HSPs: 20)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 130; E-Value: 3e-67
Query Start/End: Original strand, 255 - 412
Target Start/End: Original strand, 51603297 - 51603454
Alignment:
Q  255 gaatttctgaacaggtacttcccggaagatgtccgaggtaggaaggagatcgaatttctggagttgaagcagggtgatatgtctgttgttgagtatgctg 354  Q
    ||||||||||| ||||| |||||||||||||| ||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||    
T  51603297 gaatttctgaataggtatttcccggaagatgttcgaggtaggaaggagattgaattcctggagttgaagcagggtgatatgtctgttgttgagtatgctg 51603396  T
Q  355 caaaatttgtggagcttgcaaagttctacccccattatgctccggagacagctgaatt 412  Q
    |||||||||||||||||||||||||||| ||||||||||| |||||||||||||||||    
T  51603397 caaaatttgtggagcttgcaaagttctatccccattatgccccggagacagctgaatt 51603454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 130; E-Value: 3e-67
Query Start/End: Original strand, 255 - 412
Target Start/End: Original strand, 53749975 - 53750132
Alignment:
Q  255 gaatttctgaacaggtacttcccggaagatgtccgaggtaggaaggagatcgaatttctggagttgaagcagggtgatatgtctgttgttgagtatgctg 354  Q
    ||||||||||| ||||| |||||||||||||| ||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||    
T  53749975 gaatttctgaataggtatttcccggaagatgttcgaggtaggaaggagattgaattcctggagttgaagcagggtgatatgtctgttgttgagtatgctg 53750074  T
Q  355 caaaatttgtggagcttgcaaagttctacccccattatgctccggagacagctgaatt 412  Q
    |||||||||||||||||||||||||||| ||||||||||| |||||||||||||||||    
T  53750075 caaaatttgtggagcttgcaaagttctatccccattatgccccggagacagctgaatt 53750132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 255 - 412
Target Start/End: Complemental strand, 16155549 - 16155392
Alignment:
Q  255 gaatttctgaacaggtacttcccggaagatgtccgaggtaggaaggagatcgaatttctggagttgaagcagggtgatatgtctgttgttgagtatgctg 354  Q
    ||||| ||||| |||||||||||||||||||||||||| | ||| ||||| |||||||||||| ||||||||||||| ||||||||    ||||||||||    
T  16155549 gaattcctgaataggtacttcccggaagatgtccgaggaaagaaagagattgaatttctggagctgaagcagggtgacatgtctgtcacagagtatgctg 16155450  T
Q  355 caaaatttgtggagcttgcaaagttctacccccattatgctccggagacagctgaatt 412  Q
    |||| |||||||| |||||  |||||||||| |||||| || ||||||||||||||||    
T  16155449 caaagtttgtggaacttgcttagttctaccctcattatactgcggagacagctgaatt 16155392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 255 - 409
Target Start/End: Original strand, 14992888 - 14993042
Alignment:
Q  255 gaatttctgaacaggtacttcccggaagatgtccgaggtaggaaggagatcgaatttctggagttgaagcagggtgatatgtctgttgttgagtatgctg 354  Q
    ||||| ||||| |||||||| ||||| ||||||||||| |  |||||||| ||||||||||||||||| ||||| |||||||||||   ||||||||| |    
T  14992888 gaattcctgaataggtactttccggaggatgtccgaggcaaaaaggagattgaatttctggagttgaaacagggggatatgtctgtaactgagtatgcag 14992987  T
Q  355 caaaatttgtggagcttgcaaagttctacccccattatgctccggagacagctga 409  Q
    | || |||||||||||||||||||| || || |||||| || |||||| ||||||    
T  14992988 ctaagtttgtggagcttgcaaagttttatcctcattatactgcggagatagctga 14993042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 255 - 409
Target Start/End: Complemental strand, 16151403 - 16151249
Alignment:
Q  255 gaatttctgaacaggtacttcccggaagatgtccgaggtaggaaggagatcgaatttctggagttgaagcagggtgatatgtctgttgttgagtatgctg 354  Q
    ||||| ||||| |||||||| ||||| ||||||||||| | ||| ||||| |||||||||||| ||||||||||||| ||||||||    ||||||||||    
T  16151403 gaattcctgaataggtactttccggatgatgtccgaggaaagaaagagattgaatttctggagctgaagcagggtgacatgtctgtcacagagtatgctg 16151304  T
Q  355 caaaatttgtggagcttgcaaagttctacccccattatgctccggagacagctga 409  Q
    |||| |||||||| |||||  |||||||||| |||||| ||  ||||||||||||    
T  16151303 caaagtttgtggaacttgcttagttctaccctcattatactgtggagacagctga 16151249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 255 - 406
Target Start/End: Complemental strand, 18260208 - 18260057
Alignment:
Q  255 gaatttctgaacaggtacttcccggaagatgtccgaggtaggaaggagatcgaatttctggagttgaagcagggtgatatgtctgttgttgagtatgctg 354  Q
    ||||| ||||| ||||| || ||||||||||||||||| | ||||||||| ||||||||||| ||||| ||||| ||||| || |||   ||||||| ||    
T  18260208 gaattcctgaataggtattttccggaagatgtccgaggaaagaaggagattgaatttctggaattgaaacagggagatatatcagttacagagtatgttg 18260109  T
Q  355 caaaatttgtggagcttgcaaagttctacccccattatgctccggagacagc 406  Q
    | || ||||| |||||||| ||||||||||| |||||| || ||||||||||    
T  18260108 ctaagtttgtagagcttgctaagttctaccctcattatactgcggagacagc 18260057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 282 - 409
Target Start/End: Original strand, 29450069 - 29450196
Alignment:
Q  282 gatgtccgaggtaggaaggagatcgaatttctggagttgaagcagggtgatatgtctgttgttgagtatgctgcaaaatttgtggagcttgcaaagttct 381  Q
    |||||| |||||| ||||||||| ||||||||||||||||| |||||||| ||||||||    |||||||||||||| |||||||||||||| |  ||||    
T  29450069 gatgtcagaggtaagaaggagattgaatttctggagttgaaacagggtgacatgtctgtcacagagtatgctgcaaagtttgtggagcttgccacattct 29450168  T
Q  382 acccccattatgctccggagacagctga 409  Q
    | || ||||||  | |||||||||||||    
T  29450169 atcctcattatagtgcggagacagctga 29450196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 258 - 391
Target Start/End: Complemental strand, 20893795 - 20893662
Alignment:
Q  258 tttctgaacaggtacttcccggaagatgtccgaggtaggaaggagatcgaatttctggagttgaagcagggtgatatgtctgttgttgagtatgctgcaa 357  Q
    ||||||| |||||| || ||||| |||||| |||||| ||| || || || |||||||||||||| |||||||| ||||| ||    |||||||||||||    
T  20893795 tttctgagcaggtattttccggaggatgtcagaggtaagaaagaaattgagtttctggagttgaaacagggtgacatgtccgtcacggagtatgctgcaa 20893696  T
Q  358 aatttgtggagcttgcaaagttctacccccatta 391  Q
    | |||||||| ||||| ||||||||||| |||||    
T  20893695 agtttgtggaacttgctaagttctaccctcatta 20893662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 282 - 373
Target Start/End: Original strand, 3261326 - 3261417
Alignment:
Q  282 gatgtccgaggtaggaaggagatcgaatttctggagttgaagcagggtgatatgtctgttgttgagtatgctgcaaaatttgtggagcttgc 373  Q
    |||||| |||||| ||| ||||| ||||||||||||||||| |||||||| ||||||||    |||||||||||||| ||||||||||||||    
T  3261326 gatgtcagaggtaagaaagagattgaatttctggagttgaaacagggtgacatgtctgtcacagagtatgctgcaaagtttgtggagcttgc 3261417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 258 - 392
Target Start/End: Complemental strand, 15074123 - 15073989
Alignment:
Q  258 tttctgaacaggtacttcccggaagatgtccgaggtaggaaggagatcgaatttctggagttgaagcagggtgatatgtctgttgttgagtatgctgcaa 357  Q
    ||||| |||||||| || | ||| ||||||||||||| ||| || || |||||||||||||||||||| || ||||||||||    ||| ||||| || |    
T  15074123 tttctaaacaggtattttctggaggatgtccgaggtaagaaagaaattgaatttctggagttgaagcaaggagatatgtctgcgactgaatatgcggcta 15074024  T
Q  358 aatttgtggagcttgcaaagttctacccccattat 392  Q
    | ||||||||||||||||| || ||||| ||||||    
T  15074023 agtttgtggagcttgcaaaattttacccacattat 15073989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 282 - 409
Target Start/End: Original strand, 44658398 - 44658525
Alignment:
Q  282 gatgtccgaggtaggaaggagatcgaatttctggagttgaagcagggtgatatgtctgttgttgagtatgctgcaaaatttgtggagcttgcaaagttct 381  Q
    |||||| |||||| ||| || || ||||||||||||||||| |||||||| ||||||||    |||||||||||||| ||||| |||||||| |  ||||    
T  44658398 gatgtcagaggtaagaaagacattgaatttctggagttgaaacagggtgacatgtctgtcacagagtatgctgcaaagtttgtagagcttgccacattct 44658497  T
Q  382 acccccattatgctccggagacagctga 409  Q
    |||| |||||   | |||||||||||||    
T  44658498 accctcattacagtgcggagacagctga 44658525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 267 - 385
Target Start/End: Original strand, 11203749 - 11203867
Alignment:
Q  267 aggtacttcccggaagatgtccgaggtaggaaggagatcgaatttctggagttgaagcagggtgatatgtctgttgttgagtatgctgcaaaatttgtgg 366  Q
    |||||||| ||||| |||||| |||||| ||| || || || ||||||||| |||| |||||||||||||| |||   ||||||||||| |  |||||||    
T  11203749 aggtactttccggaggatgtcagaggtaagaaagaaattgagtttctggagctgaaacagggtgatatgtccgttacggagtatgctgctaggtttgtgg 11203848  T
Q  367 agcttgcaaagttctaccc 385  Q
    | ||||| |||||||||||    
T  11203849 aacttgctaagttctaccc 11203867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 255 - 385
Target Start/End: Complemental strand, 15267544 - 15267414
Alignment:
Q  255 gaatttctgaacaggtacttcccggaagatgtccgaggtaggaaggagatcgaatttctggagttgaagcagggtgatatgtctgttgttgagtatgctg 354  Q
    ||||| ||||| || || || ||||||||||||||||||| ||| ||||| |||||||| ||| |||| || || |||||||| |||    |||||||||    
T  15267544 gaattcctgaatagatattttccggaagatgtccgaggtaagaatgagattgaatttctagagctgaaacacggggatatgtcagttacaaagtatgctg 15267445  T
Q  355 caaaatttgtggagcttgcaaagttctaccc 385  Q
    | || |||||||| ||||| |||||||||||    
T  15267444 cgaagtttgtggaacttgctaagttctaccc 15267414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 255 - 409
Target Start/End: Complemental strand, 27904151 - 27903997
Alignment:
Q  255 gaatttctgaacaggtacttcccggaagatgtccgaggtaggaaggagatcgaatttctggagttgaagcagggtgatatgtctgttgttgagtatgctg 354  Q
    ||||| ||||| |||||||| ||||| ||||||||||| | ||| || |||||||| |||||||||||| ||||||| ||||||||    ||||||||||    
T  27904151 gaattcctgaataggtactttccggaggatgtccgaggaaagaaagaaatcgaattcctggagttgaagaagggtgacatgtctgtcacagagtatgctg 27904052  T
Q  355 caaaatttgtggagcttgcaaagttctacccccattatgctccggagacagctga 409  Q
    | || ||   ||| ||||||||||| || || || ||  || |||||||||||||    
T  27904051 ctaagttcacggaacttgcaaagttttatcctcactacactgcggagacagctga 27903997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 261 - 382
Target Start/End: Complemental strand, 13879870 - 13879749
Alignment:
Q  261 ctgaacaggtacttcccggaagatgtccgaggtaggaaggagatcgaatttctggagttgaagcagggtgatatgtctgttgttgagtatgctgcaaaat 360  Q
    |||| ||||||||| |||||||||||||| || | ||| |||||||| ||||| ||  |||| || ||||||||||| ||   | |||||||||| || |    
T  13879870 ctgagcaggtactttccggaagatgtccgtggaaagaaagagatcgagtttcttgaactgaaacaaggtgatatgtcggtaactaagtatgctgctaagt 13879771  T
Q  361 ttgtggagcttgcaaagttcta 382  Q
    |||||||||||||||| |||||    
T  13879770 ttgtggagcttgcaaaattcta 13879749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 282 - 391
Target Start/End: Complemental strand, 7358007 - 7357898
Alignment:
Q  282 gatgtccgaggtaggaaggagatcgaatttctggagttgaagcagggtgatatgtctgttgttgagtatgctgcaaaatttgtggagcttgcaaagttct 381  Q
    |||||| |||||| ||| ||||| || |||||||||||||| | |||||| ||||| ||    ||||||||||| |  |||||||||||||| |||||||    
T  7358007 gatgtcagaggtaagaaagagattgagtttctggagttgaaactgggtgacatgtccgtcacagagtatgctgctaggtttgtggagcttgctaagttct 7357908  T
Q  382 acccccatta 391  Q
    |||| |||||    
T  7357907 accctcatta 7357898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 261 - 373
Target Start/End: Complemental strand, 8709437 - 8709325
Alignment:
Q  261 ctgaacaggtacttcccggaagatgtccgaggtaggaaggagatcgaatttctggagttgaagcagggtgatatgtctgttgttgagtatgctgcaaaat 360  Q
    ||||||| |||||| || ||||||||||| || | |||||||||||| ||||| || ||||| ||||| |||||||  ||   | ||||||||||||  |    
T  8709437 ctgaacaagtactttccagaagatgtccgtggaaagaaggagatcgagtttctagaattgaaacagggagatatgttagtgactaagtatgctgcaaggt 8709338  T
Q  361 ttgtggagcttgc 373  Q
    |||||||||||||    
T  8709337 ttgtggagcttgc 8709325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 270 - 385
Target Start/End: Original strand, 14300242 - 14300357
Alignment:
Q  270 tacttcccggaagatgtccgaggtaggaaggagatcgaatttctggagttgaagcagggtgatatgtctgttgttgagtatgctgcaaaatttgtggagc 369  Q
    ||||| ||||||||||| || || | |||| ||||||| || || ||||||||||| ||  | |||||||| || ||||||||||| || |||||||| |    
T  14300242 tactttccggaagatgttcgcgggaagaagcagatcgagttccttgagttgaagcaaggaaacatgtctgtggtagagtatgctgccaagtttgtggaac 14300341  T
Q  370 ttgcaaagttctaccc 385  Q
    |  |||||||||||||    
T  14300342 tgtcaaagttctaccc 14300357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 270 - 385
Target Start/End: Original strand, 16247936 - 16248051
Alignment:
Q  270 tacttcccggaagatgtccgaggtaggaaggagatcgaatttctggagttgaagcagggtgatatgtctgttgttgagtatgctgcaaaatttgtggagc 369  Q
    ||||| ||||||||||| || || | |||||||||||| || || ||| ||||||| ||  | ||||||||    ||||||||||| || |||||||||     
T  16247936 tactttccggaagatgttcgcgggaagaaggagatcgagttccttgagctgaagcaaggaaacatgtctgtgacagagtatgctgccaagtttgtggagt 16248035  T
Q  370 ttgcaaagttctaccc 385  Q
    | ||||||||||||||    
T  16248036 tggcaaagttctaccc 16248051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 270 - 385
Target Start/End: Original strand, 18604079 - 18604194
Alignment:
Q  270 tacttcccggaagatgtccgaggtaggaaggagatcgaatttctggagttgaagcagggtgatatgtctgttgttgagtatgctgcaaaatttgtggagc 369  Q
    ||||| ||||||||||| || || | ||||||||||||||| || ||| ||||||| ||  | ||||||||    ||||||||||| || || ||||||     
T  18604079 tactttccggaagatgttcgcgggaagaaggagatcgaattccttgagctgaagcaaggaaacatgtctgtgacagagtatgctgccaagttcgtggagt 18604178  T
Q  370 ttgcaaagttctaccc 385  Q
    | ||||||||||||||    
T  18604179 tggcaaagttctaccc 18604194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 130; Significance: 3e-67; HSPs: 12)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 130; E-Value: 3e-67
Query Start/End: Original strand, 255 - 412
Target Start/End: Complemental strand, 12577751 - 12577594
Alignment:
Q  255 gaatttctgaacaggtacttcccggaagatgtccgaggtaggaaggagatcgaatttctggagttgaagcagggtgatatgtctgttgttgagtatgctg 354  Q
    ||||||||||| || ||||||||||||||||||||||||||||||||||| || || ||||| |||||||||||||||||||||||||||||||||||||    
T  12577751 gaatttctgaatagatacttcccggaagatgtccgaggtaggaaggagattgagttcctggaattgaagcagggtgatatgtctgttgttgagtatgctg 12577652  T
Q  355 caaaatttgtggagcttgcaaagttctacccccattatgctccggagacagctgaatt 412  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  12577651 caaaatttgtggagcttgcaaagttctatccccattatgctccggagacagctgaatt 12577594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 74; E-Value: 8e-34
Query Start/End: Original strand, 267 - 412
Target Start/End: Original strand, 19716074 - 19716219
Alignment:
Q  267 aggtacttcccggaagatgtccgaggtaggaaggagatcgaatttctggagttgaagcagggtgatatgtctgttgttgagtatgctgcaaaatttgtgg 366  Q
    |||||||||||||||||||||||||| | ||| ||||| ||||||||||||||||| |||||||| ||||||||    |||||||||||||| || ||||    
T  19716074 aggtacttcccggaagatgtccgaggaaagaaagagattgaatttctggagttgaaacagggtgacatgtctgtcacagagtatgctgcaaagttcgtgg 19716173  T
Q  367 agcttgcaaagttctacccccattatgctccggagacagctgaatt 412  Q
    | ||||| |||||||||||||||||   | ||||||||||||||||    
T  19716174 aacttgctaagttctacccccattacagtgcggagacagctgaatt 19716219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 74; E-Value: 8e-34
Query Start/End: Original strand, 267 - 412
Target Start/End: Original strand, 19720637 - 19720782
Alignment:
Q  267 aggtacttcccggaagatgtccgaggtaggaaggagatcgaatttctggagttgaagcagggtgatatgtctgttgttgagtatgctgcaaaatttgtgg 366  Q
    |||||||||||||||||||||||||| | ||| ||||| ||||||||||||||||| |||||||| ||||||||    |||||||||||||| || ||||    
T  19720637 aggtacttcccggaagatgtccgaggaaagaaagagattgaatttctggagttgaaacagggtgacatgtctgtcacagagtatgctgcaaagttcgtgg 19720736  T
Q  367 agcttgcaaagttctacccccattatgctccggagacagctgaatt 412  Q
    | ||||| |||||||||||||||||   | ||||||||||||||||    
T  19720737 aacttgctaagttctacccccattacagtgcggagacagctgaatt 19720782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 255 - 412
Target Start/End: Original strand, 23097063 - 23097220
Alignment:
Q  255 gaatttctgaacaggtacttcccggaagatgtccgaggtaggaaggagatcgaatttctggagttgaagcagggtgatatgtctgttgttgagtatgctg 354  Q
    ||||| ||||| || ||||| ||||||||||||||||||| ||||||||| ||||| |||||||||||||||||||| ||||||||    || |||||||    
T  23097063 gaattcctgaatagatactttccggaagatgtccgaggtaagaaggagatagaattcctggagttgaagcagggtgacatgtctgtcacggaatatgctg 23097162  T
Q  355 caaaatttgtggagcttgcaaagttctacccccattatgctccggagacagctgaatt 412  Q
    |||| || |||||  | || ||||||||||| || ||| || ||||||||||||||||    
T  23097163 caaagttcgtggaattggctaagttctaccctcactatactgcggagacagctgaatt 23097220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 255 - 403
Target Start/End: Complemental strand, 23274991 - 23274843
Alignment:
Q  255 gaatttctgaacaggtacttcccggaagatgtccgaggtaggaaggagatcgaatttctggagttgaagcagggtgatatgtctgttgttgagtatgctg 354  Q
    ||||| ||||| ||||||||||||||  ||||||| || | ||| ||||| |||||||||||| ||||||||||||||||||| |||   ||||||||||    
T  23274991 gaattcctgaataggtacttcccggagcatgtccggggaaagaaagagattgaatttctggagctgaagcagggtgatatgtcagttacagagtatgctg 23274892  T
Q  355 caaaatttgtggagcttgcaaagttctacccccattatgctccggagac 403  Q
    | || |||||||| ||||| |||||| |||| |||||| || |||||||    
T  23274891 cgaagtttgtggaacttgctaagttccaccctcattatactgcggagac 23274843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 255 - 406
Target Start/End: Complemental strand, 23296438 - 23296287
Alignment:
Q  255 gaatttctgaacaggtacttcccggaagatgtccgaggtaggaaggagatcgaatttctggagttgaagcagggtgatatgtctgttgttgagtatgctg 354  Q
    ||||| ||||| ||||||||||  || ||||||||||| | ||||||||| || ||||||||| ||||||||||||| |||||||||    | |||||||    
T  23296438 gaattcctgaataggtacttcctagaggatgtccgaggaaagaaggagattgagtttctggagctgaagcagggtgacatgtctgttacaaaatatgctg 23296339  T
Q  355 caaaatttgtggagcttgcaaagttctacccccattatgctccggagacagc 406  Q
    | || |||||||| |||| ||||||||||||| ||||| |  ||||||||||    
T  23296338 ctaagtttgtggaacttgtaaagttctaccccaattataccgcggagacagc 23296287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 258 - 373
Target Start/End: Complemental strand, 28351270 - 28351155
Alignment:
Q  258 tttctgaacaggtacttcccggaagatgtccgaggtaggaaggagatcgaatttctggagttgaagcagggtgatatgtctgttgttgagtatgctgcaa 357  Q
    |||||| ||||||| || ||||| ||||||||||||| ||| || || ||||||||||||||||||| ||| |||||||| ||   ||||||||||||||    
T  28351270 tttctggacaggtattttccggaggatgtccgaggtaagaaagaaattgaatttctggagttgaagctgggagatatgtcagtaactgagtatgctgcaa 28351171  T
Q  358 aatttgtggagcttgc 373  Q
      ||||||||||||||    
T  28351170 ggtttgtggagcttgc 28351155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 282 - 409
Target Start/End: Complemental strand, 20848957 - 20848830
Alignment:
Q  282 gatgtccgaggtaggaaggagatcgaatttctggagttgaagcagggtgatatgtctgttgttgagtatgctgcaaaatttgtggagcttgcaaagttct 381  Q
    |||||| ||| || ||| ||||| |||||||| |||||||| |||||||| ||||||||    |||||||||||||| |||||||||||||| |  ||||    
T  20848957 gatgtcagagttaagaaagagattgaatttctagagttgaaacagggtgacatgtctgtcacagagtatgctgcaaagtttgtggagcttgccacattct 20848858  T
Q  382 acccccattatgctccggagacagctga 409  Q
    | || ||||||  | |||||||||||||    
T  20848857 atcctcattatagtgcggagacagctga 20848830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 261 - 372
Target Start/End: Complemental strand, 21901929 - 21901818
Alignment:
Q  261 ctgaacaggtacttcccggaagatgtccgaggtaggaaggagatcgaatttctggagttgaagcagggtgatatgtctgttgttgagtatgctgcaaaat 360  Q
    ||||||| |||||| || ||||||||||| || | ||| |||||||| ||||| || |||||  |||| |||||||||||   ||||||||||||||| |    
T  21901929 ctgaacaagtactttccagaagatgtccgtggaaagaaagagatcgagtttcttgaattgaaatagggagatatgtctgtaactgagtatgctgcaaagt 21901830  T
Q  361 ttgtggagcttg 372  Q
    ||||||||||||    
T  21901829 ttgtggagcttg 21901818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 265 - 379
Target Start/End: Original strand, 24816894 - 24817008
Alignment:
Q  265 acaggtacttcccggaagatgtccgaggtaggaaggagatcgaatttctggagttgaagcagggtgatatgtctgttgttgagtatgctgcaaaatttgt 364  Q
    |||| ||||| ||||||||||| || || | ||| ||||| || ||||| ||| | ||||||||||||| ||| ||   ||| ||||||||||| |||||    
T  24816894 acagatactttccggaagatgttcgcggaaagaaagagattgagtttcttgagctaaagcagggtgataagtcggtgactgaatatgctgcaaagtttgt 24816993  T
Q  365 ggagcttgcaaagtt 379  Q
    |||||| || |||||    
T  24816994 ggagctggctaagtt 24817008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 270 - 367
Target Start/End: Original strand, 23104787 - 23104884
Alignment:
Q  270 tacttcccggaagatgtccgaggtaggaaggagatcgaatttctggagttgaagcagggtgatatgtctgttgttgagtatgctgcaaaatttgtgga 367  Q
    ||||| ||||||||||| || || | ||| ||||||||||| || ||| ||||||| ||  | |||||||||  |||||||||||| || ||||||||    
T  23104787 tactttccggaagatgttcgcgggaagaaagagatcgaattccttgagctgaagcaaggatacatgtctgttactgagtatgctgccaagtttgtgga 23104884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 270 - 402
Target Start/End: Original strand, 24873813 - 24873945
Alignment:
Q  270 tacttcccggaagatgtccgaggtaggaaggagatcgaatttctggagttgaagcagggtgatatgtctgttgttgagtatgctgcaaaatttgtggagc 369  Q
    ||||| ||||||||||| || || | ||||||||| ||||| || ||| ||||||||||  | ||||||||   |||||||||||| || ||||| |||     
T  24873813 tactttccggaagatgttcgcgggaagaaggagattgaattgcttgagctgaagcagggaaacatgtctgtgactgagtatgctgccaagtttgttgagt 24873912  T
Q  370 ttgcaaagttctacccccattatgctccggaga 402  Q
    | || ||||| ||||| || ||| |||| ||||    
T  24873913 tggcgaagttttacccgcactatactcctgaga 24873945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0765 (Bit Score: 114; Significance: 1e-57; HSPs: 1)
Name: scaffold0765
Description:

Target: scaffold0765; HSP #1
Raw Score: 114; E-Value: 1e-57
Query Start/End: Original strand, 255 - 412
Target Start/End: Original strand, 5765 - 5922
Alignment:
Q  255 gaatttctgaacaggtacttcccggaagatgtccgaggtaggaaggagatcgaatttctggagttgaagcagggtgatatgtctgttgttgagtatgctg 354  Q
    ||||||||||||||||||||  |||||||||||||||||||||||||||||||||| |||||| ||||||||||||||||||||||||||||||||||||    
T  5765 gaatttctgaacaggtactttacggaagatgtccgaggtaggaaggagatcgaattcctggagctgaagcagggtgatatgtctgttgttgagtatgctg 5864  T
Q  355 caaaatttgtggagcttgcaaagttctacccccattatgctccggagacagctgaatt 412  Q
    |||| |||||||| ||||||||||||||||| || ||| |  ||||||||||||||||    
T  5865 caaagtttgtggaacttgcaaagttctacccacactataccgcggagacagctgaatt 5922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005 (Bit Score: 114; Significance: 1e-57; HSPs: 1)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 114; E-Value: 1e-57
Query Start/End: Original strand, 255 - 412
Target Start/End: Complemental strand, 264022 - 263865
Alignment:
Q  255 gaatttctgaacaggtacttcccggaagatgtccgaggtaggaaggagatcgaatttctggagttgaagcagggtgatatgtctgttgttgagtatgctg 354  Q
    |||||||||||||||||||| ||||||||||||||||||||||| ||||| |||||||||||| ||||||||||||||||||||||||||||||||||||    
T  264022 gaatttctgaacaggtactttccggaagatgtccgaggtaggaaagagattgaatttctggagctgaagcagggtgatatgtctgttgttgagtatgctg 263923  T
Q  355 caaaatttgtggagcttgcaaagttctacccccattatgctccggagacagctgaatt 412  Q
    |||| |||||||| ||||||||||||||||| || ||| |  ||||||||||||||||    
T  263922 caaagtttgtggaacttgcaaagttctaccctcactataccgcggagacagctgaatt 263865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 106; Significance: 7e-53; HSPs: 23)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 106; E-Value: 7e-53
Query Start/End: Original strand, 255 - 412
Target Start/End: Original strand, 22027228 - 22027385
Alignment:
Q  255 gaatttctgaacaggtacttcccggaagatgtccgaggtaggaaggagatcgaatttctggagttgaagcagggtgatatgtctgttgttgagtatgctg 354  Q
    |||||||||||||||||||||||||||||||||||||||| ||| ||||| |||||||||||| ||||||||||| | ||||||||||||||||||||||    
T  22027228 gaatttctgaacaggtacttcccggaagatgtccgaggtaagaaagagattgaatttctggagctgaagcagggtaacatgtctgttgttgagtatgctg 22027327  T
Q  355 caaaatttgtggagcttgcaaagttctacccccattatgctccggagacagctgaatt 412  Q
    |||| |||||||| ||||||||||||||||| || ||| |  ||||||||||||||||    
T  22027328 caaagtttgtggaacttgcaaagttctaccctcactatacagcggagacagctgaatt 22027385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 98; E-Value: 4e-48
Query Start/End: Original strand, 255 - 412
Target Start/End: Complemental strand, 22054696 - 22054539
Alignment:
Q  255 gaatttctgaacaggtacttcccggaagatgtccgaggtaggaaggagatcgaatttctggagttgaagcagggtgatatgtctgttgttgagtatgctg 354  Q
    |||||||| ||||||||||| | |||||||||| |||| ||||| |||||||||||||||||| ||||| |||||||||| |||||||||||||||||||    
T  22054696 gaatttctaaacaggtactttctggaagatgtctgaggaaggaaagagatcgaatttctggagctgaagtagggtgatatatctgttgttgagtatgctg 22054597  T
Q  355 caaaatttgtggagcttgcaaagttctacccccattatgctccggagacagctgaatt 412  Q
    |||| |||||||| |||||||||||||||||||| ||| |  ||||||||||||||||    
T  22054596 caaagtttgtggaacttgcaaagttctacccccactataccgcggagacagctgaatt 22054539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 258 - 412
Target Start/End: Original strand, 31413483 - 31413637
Alignment:
Q  258 tttctgaacaggtacttcccggaagatgtccgaggtaggaaggagatcgaatttctggagttgaagcagggtgatatgtctgttgttgagtatgctgcaa 357  Q
    |||||||  |||||||||||| |||||||| || ||| ||| ||||| || |||||||| ||||||||||  |||||||| |||   |||||||||||||    
T  31413483 tttctgagtaggtacttcccgaaagatgtctgatgtaagaaagagattgagtttctggaattgaagcaggaagatatgtccgttacggagtatgctgcaa 31413582  T
Q  358 aatttgtggagcttgcaaagttctacccccattatgctccggagacagctgaatt 412  Q
    |||| ||||| ||||| |||||||||||||||||   | ||||||||||||||||    
T  31413583 aattcgtggaacttgctaagttctacccccattacagtgcggagacagctgaatt 31413637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 258 - 409
Target Start/End: Complemental strand, 21929258 - 21929107
Alignment:
Q  258 tttctgaacaggtacttcccggaagatgtccgaggtaggaaggagatcgaatttctggagttgaagcagggtgatatgtctgttgttgagtatgctgcaa 357  Q
    |||||||||||||| || ||| | |||||||||||||  |||||||| ||||| |||||||||||  |||| ||| |||||||   ||||||||| ||||    
T  21929258 tttctgaacaggtattttccgaaggatgtccgaggtaaaaaggagattgaattcctggagttgaaatagggagatttgtctgtgactgagtatgcagcaa 21929159  T
Q  358 aatttgtggagcttgcaaagttctacccccattatgctccggagacagctga 409  Q
    | ||||||||||||||||||||||| || || ||| || ||||||| |||||    
T  21929158 agtttgtggagcttgcaaagttctatcctcactatactgcggagactgctga 21929107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 258 - 340
Target Start/End: Complemental strand, 22374615 - 22374533
Alignment:
Q  258 tttctgaacaggtacttcccggaagatgtccgaggtaggaaggagatcgaatttctggagttgaagcagggtgatatgtctgt 340  Q
    |||||||||||||| || ||||| ||||| ||||||| ||||||||| ||||||||||||||||||||||| |||||||||||    
T  22374615 tttctgaacaggtattttccggaggatgttcgaggtaagaaggagattgaatttctggagttgaagcagggagatatgtctgt 22374533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 269 - 409
Target Start/End: Original strand, 29300388 - 29300528
Alignment:
Q  269 gtacttcccggaagatgtccgaggtaggaaggagatcgaatttctggagttgaagcagggtgatatgtctgttgttgagtatgctgcaaaatttgtggag 368  Q
    |||||| || ||||||||||| |||| |||||| || ||||||||||| ||||| |||||||||||| |||||   || |||||||| || || |||||     
T  29300388 gtactttccagaagatgtccggggtaagaaggaaattgaatttctggaattgaaacagggtgatatgcctgttacagaatatgctgctaagttcgtggaa 29300487  T
Q  369 cttgcaaagttctacccccattatgctccggagacagctga 409  Q
    ||||| |||||||||||||||||   | |||||||||||||    
T  29300488 cttgctaagttctacccccattacaatgcggagacagctga 29300528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 261 - 391
Target Start/End: Original strand, 6606423 - 6606553
Alignment:
Q  261 ctgaacaggtacttcccggaagatgtccgaggtaggaaggagatcgaatttctggagttgaagcagggtgatatgtctgttgttgagtatgctgcaaaat 360  Q
    |||| ||||||||| |||||||||||||| || | ||| |||||||| ||||| ||  |||| || ||||||||||| ||   |||||||||||| ||||    
T  6606423 ctgagcaggtactttccggaagatgtccgtggaaagaaagagatcgagtttcttgaactgaaacaaggtgatatgtcggtaactgagtatgctgctaaat 6606522  T
Q  361 ttgtggagcttgcaaagttctacccccatta 391  Q
    |||||||||||||||| ||||| || |||||    
T  6606523 ttgtggagcttgcaaaattctatccacatta 6606553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 276 - 379
Target Start/End: Complemental strand, 21330381 - 21330278
Alignment:
Q  276 ccggaagatgtccgaggtaggaaggagatcgaatttctggagttgaagcagggtgatatgtctgttgttgagtatgctgcaaaatttgtggagcttgcaa 375  Q
    ||||| ||||||||||||| ||| || || |||||||||||| |||||||||| |||||||| ||    |||||||||||||  ||| |||||||||| |    
T  21330381 ccggaggatgtccgaggtaagaaagaaatagaatttctggagctgaagcagggagatatgtcagtaacggagtatgctgcaaggtttttggagcttgcta 21330282  T
Q  376 agtt 379  Q
    ||||    
T  21330281 agtt 21330278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 282 - 373
Target Start/End: Complemental strand, 28984717 - 28984626
Alignment:
Q  282 gatgtccgaggtaggaaggagatcgaatttctggagttgaagcagggtgatatgtctgttgttgagtatgctgcaaaatttgtggagcttgc 373  Q
    |||||| |||||| ||| ||||| || |||||||| ||||| |||||||| ||||||||    |||||||||||||| ||||||||||||||    
T  28984717 gatgtcagaggtaagaaagagattgagtttctggaattgaaacagggtgacatgtctgtcacagagtatgctgcaaagtttgtggagcttgc 28984626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 270 - 385
Target Start/End: Complemental strand, 32603963 - 32603848
Alignment:
Q  270 tacttcccggaagatgtccgaggtaggaaggagatcgaatttctggagttgaagcagggtgatatgtctgttgttgagtatgctgcaaaatttgtggagc 369  Q
    ||||| |||||||||||||| || | |||||||||||||||||| ||| ||||||| ||  | ||||||||    ||||||||||| || || ||||||     
T  32603963 tactttccggaagatgtccgcgggaagaaggagatcgaatttcttgagctgaagcaaggaaacatgtctgtgacagagtatgctgccaagttcgtggagt 32603864  T
Q  370 ttgcaaagttctaccc 385  Q
    | ||||||||||||||    
T  32603863 tggcaaagttctaccc 32603848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 258 - 340
Target Start/End: Complemental strand, 19985958 - 19985876
Alignment:
Q  258 tttctgaacaggtacttcccggaagatgtccgaggtaggaaggagatcgaatttctggagttgaagcagggtgatatgtctgt 340  Q
    ||||||||||||||| ||||||| ||||||||||||  ||| ||||| || |||||||| ||||| || || |||||||||||    
T  19985958 tttctgaacaggtacgtcccggaggatgtccgaggtcagaaagagattgagtttctggaattgaaacaaggggatatgtctgt 19985876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 255 - 409
Target Start/End: Original strand, 22004029 - 22004183
Alignment:
Q  255 gaatttctgaacaggtacttcccggaagatgtccgaggtaggaaggagatcgaatttctggagttgaagcagggtgatatgtctgttgttgagtatgctg 354  Q
    |||||| ||| ||| ||||| | ||| ||||||||||||| ||| || || |||||||||||| ||||||| || |||||||| ||    |||||| |||    
T  22004029 gaatttttgagcagatactttctggacgatgtccgaggtaagaaagaaatagaatttctggagctgaagcaaggagatatgtcagtaacggagtattctg 22004128  T
Q  355 caaaatttgtggagcttgcaaagttctacccccattatgctccggagacagctga 409  Q
    |||  |||||||||||||| ||||| || || |||||  |  |||||||||||||    
T  22004129 caaggtttgtggagcttgctaagttttatccacattacaccgcggagacagctga 22004183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 282 - 373
Target Start/End: Original strand, 16268199 - 16268290
Alignment:
Q  282 gatgtccgaggtaggaaggagatcgaatttctggagttgaagcagggtgatatgtctgttgttgagtatgctgcaaaatttgtggagcttgc 373  Q
    |||||| |||||| ||| || || || |||||||||||||| |||||||||||||| |||   || ||||||||||| |||||||| |||||    
T  16268199 gatgtcagaggtaagaaagaaattgagtttctggagttgaaacagggtgatatgtccgttacggaatatgctgcaaagtttgtggaacttgc 16268290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 255 - 409
Target Start/End: Original strand, 21998388 - 21998542
Alignment:
Q  255 gaatttctgaacaggtacttcccggaagatgtccgaggtaggaaggagatcgaatttctggagttgaagcagggtgatatgtctgttgttgagtatgctg 354  Q
    |||||| ||| ||| ||||| | ||| ||||| ||||||| ||| || || |||||||| ||| ||||||| || |||||||| ||    ||||||||||    
T  21998388 gaatttttgagcagatactttctggacgatgtgcgaggtaagaaagaaatagaatttctagagctgaagcaaggagatatgtcagtaacggagtatgctg 21998487  T
Q  355 caaaatttgtggagcttgcaaagttctacccccattatgctccggagacagctga 409  Q
    |||  |||||||||||||| ||||| || || |||||  |  |||||||||||||    
T  21998488 caaggtttgtggagcttgctaagttttatccacattacaccgcggagacagctga 21998542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 270 - 395
Target Start/End: Complemental strand, 15537201 - 15537076
Alignment:
Q  270 tacttcccggaagatgtccgaggtaggaaggagatcgaatttctggagttgaagcagggtgatatgtctgttgttgagtatgctgcaaaatttgtggagc 369  Q
    ||||| ||||||||||| || || | ||||||||||||||| || ||| ||||||| ||  | ||||||||    ||||||||||| || |||||||||     
T  15537201 tactttccggaagatgttcgcgggaagaaggagatcgaattccttgagctgaagcaaggaaacatgtctgtgacagagtatgctgccaagtttgtggagt 15537102  T
Q  370 ttgcaaagttctacccccattatgct 395  Q
    | ||||||||||| ||  ||||||||    
T  15537101 tggcaaagttctatccgtattatgct 15537076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 282 - 379
Target Start/End: Original strand, 21970526 - 21970623
Alignment:
Q  282 gatgtccgaggtaggaaggagatcgaatttctggagttgaagcagggtgatatgtctgttgttgagtatgctgcaaaatttgtggagcttgcaaagtt 379  Q
    ||||||||||||| ||| || || |||||||||||| || |||| || |||||||| ||    |||||||||||||  |||||||||||||| |||||    
T  21970526 gatgtccgaggtaagaaagaaatagaatttctggagctgcagcaaggagatatgtcagtaacggagtatgctgcaaggtttgtggagcttgctaagtt 21970623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 262 - 379
Target Start/End: Original strand, 22710225 - 22710342
Alignment:
Q  262 tgaacaggtacttcccggaagatgtccgaggtaggaaggagatcgaatttctggagttgaagcagggtgatatgtctgttgttgagtatgctgcaaaatt 361  Q
    |||| |||||||| ||||||||||| || || | |||||| || || || |||||||||||||| ||||||||||| ||    ||||||||||| || ||    
T  22710225 tgaataggtactttccggaagatgttcgcgggaagaaggaaattgagttcctggagttgaagcaaggtgatatgtcagtaacggagtatgctgctaagtt 22710324  T
Q  362 tgtggagcttgcaaagtt 379  Q
    ||| ||| | ||||||||    
T  22710325 tgttgagttggcaaagtt 22710342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 270 - 385
Target Start/End: Complemental strand, 18860392 - 18860277
Alignment:
Q  270 tacttcccggaagatgtccgaggtaggaaggagatcgaatttctggagttgaagcagggtgatatgtctgttgttgagtatgctgcaaaatttgtggagc 369  Q
    ||||| ||||||||||| || || | |||||||||||| || || ||||||||| | ||  ||||||||||    ||||||||||| || || |||||||    
T  18860392 tactttccggaagatgttcgcgggaagaaggagatcgagttccttgagttgaagtaaggaaatatgtctgtgagagagtatgctgccaagttcgtggagc 18860293  T
Q  370 ttgcaaagttctaccc 385  Q
    | || |||||||||||    
T  18860292 tggcgaagttctaccc 18860277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 261 - 376
Target Start/End: Complemental strand, 20391913 - 20391798
Alignment:
Q  261 ctgaacaggtacttcccggaagatgtccgaggtaggaaggagatcgaatttctggagttgaagcagggtgatatgtctgttgttgagtatgctgcaaaat 360  Q
    ||||||||||||||||| ||||||||||| |||| ||| ||||  |||||| | || ||||| ||||| || ||||  ||   ||||||||||||||| |    
T  20391913 ctgaacaggtacttcccagaagatgtccgtggtaagaaagagaatgaatttgttgaattgaaacagggagacatgttagtaactgagtatgctgcaaagt 20391814  T
Q  361 ttgtggagcttgcaaa 376  Q
    |  |||||||| ||||    
T  20391813 tcatggagcttacaaa 20391798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 282 - 409
Target Start/End: Original strand, 21981929 - 21982056
Alignment:
Q  282 gatgtccgaggtaggaaggagatcgaatttctggagttgaagcagggtgatatgtctgttgttgagtatgctgcaaaatttgtggagcttgcaaagttct 381  Q
    ||||||||||||| ||| || || |||||||| ||| ||||||| || |||||||| ||    |||||| ||||||  |||||||||||||| ||||| |    
T  21981929 gatgtccgaggtaagaaagaaatagaatttctagagctgaagcaaggagatatgtcagtaacggagtatactgcaaggtttgtggagcttgctaagtttt 21982028  T
Q  382 acccccattatgctccggagacagctga 409  Q
    | || |||||  |  |||||||||||||    
T  21982029 atccacattacaccgcggagacagctga 21982056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 270 - 385
Target Start/End: Original strand, 22117141 - 22117256
Alignment:
Q  270 tacttcccggaagatgtccgaggtaggaaggagatcgaatttctggagttgaagcagggtgatatgtctgttgttgagtatgctgcaaaatttgtggagc 369  Q
    ||||| ||||||||||| || || | |||||||||||| || || ||||||||||| ||  | ||||||||    ||||||||||| || || |||||||    
T  22117141 tactttccggaagatgttcgcgggaagaaggagatcgagttccttgagttgaagcaaggaaacatgtctgtgacagagtatgctgccaagttcgtggagc 22117240  T
Q  370 ttgcaaagttctaccc 385  Q
    |  |||||||||||||    
T  22117241 tgtcaaagttctaccc 22117256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 270 - 385
Target Start/End: Original strand, 22125925 - 22126040
Alignment:
Q  270 tacttcccggaagatgtccgaggtaggaaggagatcgaatttctggagttgaagcagggtgatatgtctgttgttgagtatgctgcaaaatttgtggagc 369  Q
    ||||| ||||||||||| || || | |||||||||||| || || ||||||||||| ||  | ||||||||    ||||||||||| || || |||||||    
T  22125925 tactttccggaagatgttcgcgggaagaaggagatcgagttccttgagttgaagcaaggaaacatgtctgtgacagagtatgctgccaagttcgtggagc 22126024  T
Q  370 ttgcaaagttctaccc 385  Q
    |  |||||||||||||    
T  22126025 tgtcaaagttctaccc 22126040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 270 - 383
Target Start/End: Original strand, 22114368 - 22114481
Alignment:
Q  270 tacttcccggaagatgtccgaggtaggaaggagatcgaatttctggagttgaagcagggtgatatgtctgttgttgagtatgctgcaaaatttgtggagc 369  Q
    ||||| |||||||||||  | || | ||||||||||||||| || ||||||||||| ||  | ||||||||    ||||||||||| || || ||||||     
T  22114368 tactttccggaagatgtttgcgggaagaaggagatcgaattccttgagttgaagcaaggaaacatgtctgtgaccgagtatgctgccaagttcgtggagt 22114467  T
Q  370 ttgcaaagttctac 383  Q
    | ||||||||||||    
T  22114468 tggcaaagttctac 22114481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0518 (Bit Score: 102; Significance: 2e-50; HSPs: 1)
Name: scaffold0518
Description:

Target: scaffold0518; HSP #1
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 255 - 412
Target Start/End: Complemental strand, 2627 - 2470
Alignment:
Q  255 gaatttctgaacaggtacttcccggaagatgtccgaggtaggaaggagatcgaatttctggagttgaagcagggtgatatgtctgttgttgagtatgctg 354  Q
    |||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||||| |||||||| |||| ||||||||||||||||||||||    
T  2627 gaatttctgaacaggtacttcccggaagatgtccgaggtaggaaagagattgaatttctggagctgaagcagagtgacatgtctgttgttgagtatgctg 2528  T
Q  355 caaaatttgtggagcttgcaaagttctacccccattatgctccggagacagctgaatt 412  Q
    |||  ||||||||  |||||||||||||||| || ||| |  ||||||||||||||||    
T  2527 caaggtttgtggaatttgcaaagttctaccctcactataccgcggagacagctgaatt 2470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0239 (Bit Score: 102; Significance: 2e-50; HSPs: 1)
Name: scaffold0239
Description:

Target: scaffold0239; HSP #1
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 255 - 384
Target Start/End: Original strand, 9307 - 9436
Alignment:
Q  255 gaatttctgaacaggtacttcccggaagatgtccgaggtaggaaggagatcgaatttctggagttgaagcagggtgatatgtctgttgttgagtatgctg 354  Q
    |||||||||||||||||||| ||||||||||||||||||||||| ||||  |||||||||||| ||||||||||||||||||||||||||||||||||||    
T  9307 gaatttctgaacaggtactttccggaagatgtccgaggtaggaaagagaatgaatttctggagctgaagcagggtgatatgtctgttgttgagtatgctg 9406  T
Q  355 caaaatttgtggagcttgcaaagttctacc 384  Q
    |||| |||||||| ||||||||||||||||    
T  9407 caaagtttgtggaacttgcaaagttctacc 9436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 102; Significance: 2e-50; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 255 - 412
Target Start/End: Complemental strand, 204177 - 204020
Alignment:
Q  255 gaatttctgaacaggtacttcccggaagatgtccgaggtaggaaggagatcgaatttctggagttgaagcagggtgatatgtctgttgttgagtatgctg 354  Q
    |||||||||||||||||||| ||||||||||||||||||||||| ||||| |||||||||||  ||||| |||||| |||||||||||||||||||||||    
T  204177 gaatttctgaacaggtactttccggaagatgtccgaggtaggaaagagattgaatttctggaactgaagtagggtgctatgtctgttgttgagtatgctg 204078  T
Q  355 caaaatttgtggagcttgcaaagttctacccccattatgctccggagacagctgaatt 412  Q
    |||| |||||||| |||| |||||||||||| || ||| || ||||||||||||||||    
T  204077 caaagtttgtggaacttgtaaagttctaccctcactatactgcggagacagctgaatt 204020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0348 (Bit Score: 98; Significance: 4e-48; HSPs: 2)
Name: scaffold0348
Description:

Target: scaffold0348; HSP #1
Raw Score: 98; E-Value: 4e-48
Query Start/End: Original strand, 255 - 412
Target Start/End: Original strand, 4355 - 4512
Alignment:
Q  255 gaatttctgaacaggtacttcccggaagatgtccgaggtaggaaggagatcgaatttctggagttgaagcagggtgatatgtctgttgttgagtatgctg 354  Q
    |||||||||||||||||||| |  |||||||||||||||||||| ||||| |||||||||||  ||||||||||||| ||||||||||||||||||||||    
T  4355 gaatttctgaacaggtactttctagaagatgtccgaggtaggaaagagattgaatttctggaactgaagcagggtgacatgtctgttgttgagtatgctg 4454  T
Q  355 caaaatttgtggagcttgcaaagttctacccccattatgctccggagacagctgaatt 412  Q
    |||| |||||||| ||||||||||||||||| || ||| |  ||||||||||||||||    
T  4455 caaagtttgtggaacttgcaaagttctaccctcactataccgcggagacagctgaatt 4512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0348; HSP #2
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 346 - 412
Target Start/End: Original strand, 17083 - 17149
Alignment:
Q  346 agtatgctgcaaaatttgtggagcttgcaaagttctacccccattatgctccggagacagctgaatt 412  Q
    ||||||||||||| |||||||| ||||||||||||||||| || ||| |  ||||||||||||||||    
T  17083 agtatgctgcaaagtttgtggaacttgcaaagttctaccctcactataccgcggagacagctgaatt 17149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0072 (Bit Score: 91; Significance: 6e-44; HSPs: 1)
Name: scaffold0072
Description:

Target: scaffold0072; HSP #1
Raw Score: 91; E-Value: 6e-44
Query Start/End: Original strand, 262 - 412
Target Start/End: Complemental strand, 54836 - 54686
Alignment:
Q  262 tgaacaggtacttcccggaagatgtccgaggtaggaaggagatcgaatttctggagttgaagcagggtgatatgtctgttgttgagtatgctgcaaaatt 361  Q
    |||| |||||||||||||||||||||||||| | ||| ||||| |||||||||||| ||||||||||||||||||||||  | |||||||||||||| ||    
T  54836 tgaataggtacttcccggaagatgtccgaggaaagaaagagattgaatttctggagctgaagcagggtgatatgtctgtcatagagtatgctgcaaagtt 54737  T
Q  362 tgtggagcttgcaaagttctacccccattatgctccggagacagctgaatt 412  Q
    |||||| ||||||||||||||||| |||||| || |||||||| |||||||    
T  54736 tgtggaacttgcaaagttctaccctcattatactgcggagacatctgaatt 54686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0114 (Bit Score: 90; Significance: 2e-43; HSPs: 1)
Name: scaffold0114
Description:

Target: scaffold0114; HSP #1
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 255 - 412
Target Start/End: Complemental strand, 40854 - 40697
Alignment:
Q  255 gaatttctgaacaggtacttcccggaagatgtccgaggtaggaaggagatcgaatttctggagttgaagcagggtgatatgtctgttgttgagtatgctg 354  Q
    |||||||||||||||||||| || |||||||||||||||||||| ||||| |||||||||||  ||||| ||||||| |||| |||||||||||||| ||    
T  40854 gaatttctgaacaggtactttccagaagatgtccgaggtaggaaagagattgaatttctggaactgaagtagggtgacatgtatgttgttgagtatgttg 40755  T
Q  355 caaaatttgtggagcttgcaaagttctacccccattatgctccggagacagctgaatt 412  Q
    |||| |||||||| ||||||||||||||||| || ||| |  ||||||||||||||||    
T  40754 caaagtttgtggaacttgcaaagttctacccacactataccgcggagacagctgaatt 40697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0067 (Bit Score: 86; Significance: 6e-41; HSPs: 4)
Name: scaffold0067
Description:

Target: scaffold0067; HSP #1
Raw Score: 86; E-Value: 6e-41
Query Start/End: Original strand, 255 - 412
Target Start/End: Original strand, 48688 - 48845
Alignment:
Q  255 gaatttctgaacaggtacttcccggaagatgtccgaggtaggaaggagatcgaatttctggagttgaagcagggtgatatgtctgttgttgagtatgctg 354  Q
    ||||||||||||||||| || || |||||||||||||||||||| |||||||||||||| ||  ||||||||||||  ||||||||||||||||||||||    
T  48688 gaatttctgaacaggtattttccagaagatgtccgaggtaggaaagagatcgaatttctagaactgaagcagggtggcatgtctgttgttgagtatgctg 48787  T
Q  355 caaaatttgtggagcttgcaaagttctacccccattatgctccggagacagctgaatt 412  Q
      || |||||||| ||||||||||||||||| || ||| |  ||||||||||||||||    
T  48788 tgaagtttgtggaacttgcaaagttctaccctcactataccgcggagacagctgaatt 48845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0067; HSP #2
Raw Score: 86; E-Value: 6e-41
Query Start/End: Original strand, 255 - 412
Target Start/End: Original strand, 57722 - 57879
Alignment:
Q  255 gaatttctgaacaggtacttcccggaagatgtccgaggtaggaaggagatcgaatttctggagttgaagcagggtgatatgtctgttgttgagtatgctg 354  Q
    ||||||||||||||||| || || |||||||||||||||||||| |||||||||||||| ||  ||||||||||||  ||||||||||||||||||||||    
T  57722 gaatttctgaacaggtattttccagaagatgtccgaggtaggaaagagatcgaatttctagaactgaagcagggtggcatgtctgttgttgagtatgctg 57821  T
Q  355 caaaatttgtggagcttgcaaagttctacccccattatgctccggagacagctgaatt 412  Q
      || |||||||| ||||||||||||||||| || ||| |  ||||||||||||||||    
T  57822 tgaagtttgtggaacttgcaaagttctaccctcactataccgcggagacagctgaatt 57879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0067; HSP #3
Raw Score: 86; E-Value: 6e-41
Query Start/End: Original strand, 255 - 412
Target Start/End: Original strand, 64110 - 64267
Alignment:
Q  255 gaatttctgaacaggtacttcccggaagatgtccgaggtaggaaggagatcgaatttctggagttgaagcagggtgatatgtctgttgttgagtatgctg 354  Q
    ||||||||||||||||| || || |||||||||||||||||||| |||||||||||||| ||  ||||||||||||  ||||||||||||||||||||||    
T  64110 gaatttctgaacaggtattttccagaagatgtccgaggtaggaaagagatcgaatttctagaactgaagcagggtggcatgtctgttgttgagtatgctg 64209  T
Q  355 caaaatttgtggagcttgcaaagttctacccccattatgctccggagacagctgaatt 412  Q
      || |||||||| ||||||||||||||||| || ||| |  ||||||||||||||||    
T  64210 tgaagtttgtggaacttgcaaagttctaccctcactataccgcggagacagctgaatt 64267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0067; HSP #4
Raw Score: 74; E-Value: 8e-34
Query Start/End: Original strand, 256 - 409
Target Start/End: Complemental strand, 30419 - 30266
Alignment:
Q  256 aatttctgaacaggtacttcccggaagatgtccgaggtaggaaggagatcgaatttctggagttgaagcagggtgatatgtctgttgttgagtatgctgc 355  Q
    |||| ||||| |||||||| ||||| ||||||||||||| ||||||||| |||||||||||| | || ||||| ||||||||||||   |||||||||||    
T  30419 aattcctgaataggtactttccggaggatgtccgaggtaagaaggagattgaatttctggagctaaaacagggggatatgtctgttacagagtatgctgc 30320  T
Q  356 aaaatttgtggagcttgcaaagttctacccccattatgctccggagacagctga 409  Q
     || |||||||| ||||| ||||||||||| |||||| || |||||||||||||    
T  30319 gaagtttgtggaacttgctaagttctaccctcattatactgcggagacagctga 30266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 82; Significance: 1e-38; HSPs: 24)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 255 - 412
Target Start/End: Complemental strand, 19438633 - 19438476
Alignment:
Q  255 gaatttctgaacaggtacttcccggaagatgtccgaggtaggaaggagatcgaatttctggagttgaagcagggtgatatgtctgttgttgagtatgctg 354  Q
    ||||| ||||| |||||||||||||||||||||||||| | ||| ||||| |||||||||||| ||||||| ||||| ||||||||    ||||||||||    
T  19438633 gaattcctgaataggtacttcccggaagatgtccgagggaagaaagagattgaatttctggagctgaagcaaggtgacatgtctgtcacagagtatgctg 19438534  T
Q  355 caaaatttgtggagcttgcaaagttctacccccattatgctccggagacagctgaatt 412  Q
    | || |||||||| |||||||||||||||||||||||| || |||| |||||||||||    
T  19438533 ctaagtttgtggaacttgcaaagttctacccccattatactacggaaacagctgaatt 19438476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 255 - 412
Target Start/End: Complemental strand, 18798321 - 18798164
Alignment:
Q  255 gaatttctgaacaggtacttcccggaagatgtccgaggtaggaaggagatcgaatttctggagttgaagcagggtgatatgtctgttgttgagtatgctg 354  Q
    ||||||||||| |||||||| ||||| |||||| |||||| ||||||||| ||||||||| || ||||||||||||| ||||||||  | ||||||||||    
T  18798321 gaatttctgaataggtactttccggaggatgtcagaggtaagaaggagattgaatttctgcagctgaagcagggtgacatgtctgtcatagagtatgctg 18798222  T
Q  355 caaaatttgtggagcttgcaaagttctacccccattatgctccggagacagctgaatt 412  Q
    | || |||||||| ||||| ||||||||||| |||||| || | ||||||||||||||    
T  18798221 cgaagtttgtggaacttgctaagttctaccctcattatactgcagagacagctgaatt 18798164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 74; E-Value: 8e-34
Query Start/End: Original strand, 255 - 412
Target Start/End: Original strand, 14376566 - 14376723
Alignment:
Q  255 gaatttctgaacaggtacttcccggaagatgtccgaggtaggaaggagatcgaatttctggagttgaagcagggtgatatgtctgttgttgagtatgctg 354  Q
    ||||| ||||| |||||||||||||||||||||||||| | ||| ||||| |||||||||||| ||||| ||||||| |||| |||    ||||||||||    
T  14376566 gaattcctgaataggtacttcccggaagatgtccgaggaaagaaagagattgaatttctggagctgaagtagggtgacatgtttgtcacagagtatgctg 14376665  T
Q  355 caaaatttgtggagcttgcaaagttctacccccattatgctccggagacagctgaatt 412  Q
    |||| |||||||| ||||| ||||||||||| || ||| || ||||||||||||||||    
T  14376666 caaagtttgtggaacttgctaagttctaccctcactatactgcggagacagctgaatt 14376723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 267 - 409
Target Start/End: Complemental strand, 19456642 - 19456500
Alignment:
Q  267 aggtacttcccggaagatgtccgaggtaggaaggagatcgaatttctggagttgaagcagggtgatatgtctgttgttgagtatgctgcaaaatttgtgg 366  Q
    |||||||| ||||| ||||||||||| | ||| || ||||| ||||||||| |||||||||| ||||||||||||   |||||||||||||| |||||||    
T  19456642 aggtactttccggaggatgtccgaggaaagaaagaaatcgagtttctggagctgaagcagggggatatgtctgttacagagtatgctgcaaagtttgtgg 19456543  T
Q  367 agcttgcaaagttctacccccattatgctccggagacagctga 409  Q
    | ||||| |||||||||||||| ||| |  |||||||||||||    
T  19456542 aacttgctaagttctacccccactataccgcggagacagctga 19456500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 267 - 409
Target Start/End: Complemental strand, 19466787 - 19466645
Alignment:
Q  267 aggtacttcccggaagatgtccgaggtaggaaggagatcgaatttctggagttgaagcagggtgatatgtctgttgttgagtatgctgcaaaatttgtgg 366  Q
    |||||||| ||||| ||||||||||| | ||| || ||||| ||||||||| |||||||||| ||||||||||||   |||||||||||||| |||||||    
T  19466787 aggtactttccggaggatgtccgaggaaagaaagaaatcgagtttctggagctgaagcagggggatatgtctgttacagagtatgctgcaaagtttgtgg 19466688  T
Q  367 agcttgcaaagttctacccccattatgctccggagacagctga 409  Q
    | ||||| |||||||||||||| ||| |  |||||||||||||    
T  19466687 aacttgctaagttctacccccactataccgcggagacagctga 19466645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 255 - 409
Target Start/End: Original strand, 24515074 - 24515228
Alignment:
Q  255 gaatttctgaacaggtacttcccggaagatgtccgaggtaggaaggagatcgaatttctggagttgaagcagggtgatatgtctgttgttgagtatgctg 354  Q
    ||||| ||||| |||||||| ||||| ||||||||||| | ||||| ||| || ||||||||||||||||||||||| ||||||||    ||||||||||    
T  24515074 gaattcctgaataggtactttccggaggatgtccgagggaagaaggtgattgagtttctggagttgaagcagggtgacatgtctgtcacagagtatgctg 24515173  T
Q  355 caaaatttgtggagcttgcaaagttctacccccattatgctccggagacagctga 409  Q
     ||| |||||||| ||||| |||||||||||||| ||| |  |||||||||||||    
T  24515174 taaagtttgtggaacttgctaagttctacccccactataccgcggagacagctga 24515228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 255 - 409
Target Start/End: Complemental strand, 16814271 - 16814117
Alignment:
Q  255 gaatttctgaacaggtacttcccggaagatgtccgaggtaggaaggagatcgaatttctggagttgaagcagggtgatatgtctgttgttgagtatgctg 354  Q
    ||||| ||||| ||||| || ||||| ||||||||||| |  ||||| || |||||||||||| |||| |||||||||||||| |||   || |||||||    
T  16814271 gaattcctgaataggtattttccggaggatgtccgagggaaaaaggaaattgaatttctggagctgaaacagggtgatatgtcagttacagaatatgctg 16814172  T
Q  355 caaaatttgtggagcttgcaaagttctacccccattatgctccggagacagctga 409  Q
    |||| |||||||| ||||| ||||||||||| ||||||  | |||||||||||||    
T  16814171 caaagtttgtggaacttgctaagttctaccctcattatagtgcggagacagctga 16814117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 255 - 409
Target Start/End: Original strand, 8720355 - 8720509
Alignment:
Q  255 gaatttctgaacaggtacttcccggaagatgtccgaggtaggaaggagatcgaatttctggagttgaagcagggtgatatgtctgttgttgagtatgctg 354  Q
    ||||| ||||| ||||| || ||||| ||||||||||| |  ||||| || |||||||||||| |||| ||||| |||||||| |||   ||||||||||    
T  8720355 gaattcctgaataggtattttccggaggatgtccgagggaaaaaggaaattgaatttctggagctgaaacagggggatatgtcagttacagagtatgctg 8720454  T
Q  355 caaaatttgtggagcttgcaaagttctacccccattatgctccggagacagctga 409  Q
    | || |||||||| ||||| ||||||||||| ||||||  | ||||||| |||||    
T  8720455 ctaagtttgtggaacttgctaagttctaccctcattatagtgcggagaccgctga 8720509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 255 - 412
Target Start/End: Original strand, 21566641 - 21566798
Alignment:
Q  255 gaatttctgaacaggtacttcccggaagatgtccgaggtaggaaggagatcgaatttctggagttgaagcagggtgatatgtctgttgttgagtatgctg 354  Q
    ||||| ||||| ||||| || |||||||||||||| |||| |||||||||||| |||||||||||||| || ||||| ||||||||    ||||||||||    
T  21566641 gaattcctgaataggtattttccggaagatgtccgtggtaagaaggagatcgagtttctggagttgaaacaaggtgacatgtctgtcacagagtatgctg 21566740  T
Q  355 caaaatttgtggagcttgcaaagttctacccccattatgctccggagacagctgaatt 412  Q
      || || ||||| || || ||||||||||| || ||| || || |||||| ||||||    
T  21566741 tgaagttcgtggaactagctaagttctaccctcactatactgcgtagacagttgaatt 21566798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 267 - 391
Target Start/End: Original strand, 10465510 - 10465634
Alignment:
Q  267 aggtacttcccggaagatgtccgaggtaggaaggagatcgaatttctggagttgaagcagggtgatatgtctgttgttgagtatgctgcaaaatttgtgg 366  Q
    ||||| |||||||||||||||||||||| ||| || || || |||||||| ||||| |||||||||||||| |||    |||||||||| || || ||||    
T  10465510 aggtatttcccggaagatgtccgaggtaagaaagaaattgagtttctggaattgaaacagggtgatatgtccgttacgcagtatgctgctaagttcgtgg 10465609  T
Q  367 agcttgcaaagttctacccccatta 391  Q
    | ||||| ||||||||||| |||||    
T  10465610 aacttgctaagttctaccctcatta 10465634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 264 - 385
Target Start/End: Complemental strand, 21475155 - 21475034
Alignment:
Q  264 aacaggtacttcccggaagatgtccgaggtaggaaggagatcgaatttctggagttgaagcagggtgatatgtctgttgttgagtatgctgcaaaatttg 363  Q
    ||||||||||| | ||||||||||||||||| |||||| || |||||||| || |||||||| || |||||||||||   |||||||||  | || ||||    
T  21475155 aacaggtactttcgggaagatgtccgaggtaagaaggaaattgaatttctagaattgaagcaaggggatatgtctgtgactgagtatgcaactaagtttg 21475056  T
Q  364 tggagcttgcaaagttctaccc 385  Q
    |||| |||||||| || |||||    
T  21475055 tggaacttgcaaaattttaccc 21475034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 255 - 338
Target Start/End: Original strand, 20010151 - 20010234
Alignment:
Q  255 gaatttctgaacaggtacttcccggaagatgtccgaggtaggaaggagatcgaatttctggagttgaagcagggtgatatgtct 338  Q
    ||||| ||||| || ||||| ||||||||||||||||| | ||| || || |||||||||||||||||||||||||| ||||||    
T  20010151 gaattcctgaatagatactttccggaagatgtccgagggaagaaagaaatagaatttctggagttgaagcagggtgacatgtct 20010234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 282 - 409
Target Start/End: Complemental strand, 24368004 - 24367877
Alignment:
Q  282 gatgtccgaggtaggaaggagatcgaatttctggagttgaagcagggtgatatgtctgttgttgagtatgctgcaaaatttgtggagcttgcaaagttct 381  Q
    |||||| |||||| |||  |||| ||||||||||||||||| |||||||| ||||||||    ||||| |||||||| |||||||||||||| |  ||||    
T  24368004 gatgtcagaggtaagaaaaagattgaatttctggagttgaaacagggtgacatgtctgtcacagagtacgctgcaaagtttgtggagcttgccacattct 24367905  T
Q  382 acccccattatgctccggagacagctga 409  Q
    |||| |||||   | |||||||||||||    
T  24367904 accctcattacagtgcggagacagctga 24367877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 255 - 337
Target Start/End: Complemental strand, 15462967 - 15462885
Alignment:
Q  255 gaatttctgaacaggtacttcccggaagatgtccgaggtaggaaggagatcgaatttctggagttgaagcagggtgatatgtc 337  Q
    ||||| ||||| || ||||| ||||||||||||||||| | |||||| || ||||||||||||||||| |||||||| |||||    
T  15462967 gaattcctgaatagatactttccggaagatgtccgagggaagaaggaaatagaatttctggagttgaaacagggtgacatgtc 15462885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 264 - 412
Target Start/End: Complemental strand, 25771466 - 25771318
Alignment:
Q  264 aacaggtacttcccggaagatgtccgaggtaggaaggagatcgaatttctggagttgaagcagggtgatatgtctgttgttgagtatgctgcaaaatttg 363  Q
    ||||||||||| | ||| ||||| ||||||| |||||| || ||||||||||| |||||||| || |||||||||||   ||| ||||| || || ||||    
T  25771466 aacaggtactttctggaggatgttcgaggtaagaaggaaattgaatttctggaattgaagcaaggggatatgtctgtgactgaatatgcagctaagtttg 25771367  T
Q  364 tggagcttgcaaagttctacccccattatgctccggagacagctgaatt 412  Q
    | ||||||||| | || ||||| || ||| || | ||||| ||||||||    
T  25771366 tagagcttgcataattttacccacactattctgctgagactgctgaatt 25771318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 270 - 385
Target Start/End: Complemental strand, 27206235 - 27206120
Alignment:
Q  270 tacttcccggaagatgtccgaggtaggaaggagatcgaatttctggagttgaagcagggtgatatgtctgttgttgagtatgctgcaaaatttgtggagc 369  Q
    ||||| ||||||||||| || || | ||||||||||||||| || ||||||||||| ||  ||||||| ||    ||||||||||| || ||||||||||    
T  27206235 tactttccggaagatgttcgcgggaagaaggagatcgaattccttgagttgaagcaaggaaatatgtccgtgacagagtatgctgccaagtttgtggagc 27206136  T
Q  370 ttgcaaagttctaccc 385  Q
    |  | |||||||||||    
T  27206135 tgtcgaagttctaccc 27206120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 270 - 385
Target Start/End: Original strand, 27242993 - 27243108
Alignment:
Q  270 tacttcccggaagatgtccgaggtaggaaggagatcgaatttctggagttgaagcagggtgatatgtctgttgttgagtatgctgcaaaatttgtggagc 369  Q
    ||||| ||||||||||| || || | ||||||||||||||| || ||||||||||| ||  ||||||| ||    ||||||||||| || ||||||||||    
T  27242993 tactttccggaagatgttcgcgggaagaaggagatcgaattccttgagttgaagcaaggaaatatgtccgtgacagagtatgctgccaagtttgtggagc 27243092  T
Q  370 ttgcaaagttctaccc 385  Q
    |  | |||||||||||    
T  27243093 tgtcgaagttctaccc 27243108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 258 - 337
Target Start/End: Original strand, 19485964 - 19486043
Alignment:
Q  258 tttctgaacaggtacttcccggaagatgtccgaggtaggaaggagatcgaatttctggagttgaagcagggtgatatgtc 337  Q
    ||||||||||||||||| || ||||||||||  || | |||||||||||| ||||| || ||||| ||||  ||||||||    
T  19485964 tttctgaacaggtactttccagaagatgtccatggaaagaaggagatcgagtttctcgaattgaaacaggaagatatgtc 19486043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 270 - 385
Target Start/End: Original strand, 28259865 - 28259980
Alignment:
Q  270 tacttcccggaagatgtccgaggtaggaaggagatcgaatttctggagttgaagcagggtgatatgtctgttgttgagtatgctgcaaaatttgtggagc 369  Q
    ||||| ||||||||||| || || | |||||||||||| || || ||||||||||| ||  | ||||||||    ||||||||||| || ||||||||||    
T  28259865 tactttccggaagatgttcgcgggaagaaggagatcgagttccttgagttgaagcaagggaacatgtctgtgacagagtatgctgccaagtttgtggagc 28259964  T
Q  370 ttgcaaagttctaccc 385  Q
    |  ||||||| |||||    
T  28259965 tgtcaaagttttaccc 28259980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 270 - 385
Target Start/End: Complemental strand, 28286051 - 28285936
Alignment:
Q  270 tacttcccggaagatgtccgaggtaggaaggagatcgaatttctggagttgaagcagggtgatatgtctgttgttgagtatgctgcaaaatttgtggagc 369  Q
    ||||| ||||||||||| || || | |||||||||||| || || ||||||||||| ||  | ||||||||    ||||||||||| || ||||||||||    
T  28286051 tactttccggaagatgttcgcgggaagaaggagatcgagttccttgagttgaagcaagggaacatgtctgtgacagagtatgctgccaagtttgtggagc 28285952  T
Q  370 ttgcaaagttctaccc 385  Q
    |  ||||||| |||||    
T  28285951 tgtcaaagttttaccc 28285936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 270 - 385
Target Start/End: Original strand, 28338614 - 28338729
Alignment:
Q  270 tacttcccggaagatgtccgaggtaggaaggagatcgaatttctggagttgaagcagggtgatatgtctgttgttgagtatgctgcaaaatttgtggagc 369  Q
    ||||| ||||||||||| || || | |||||||||||| || || ||||||||||| ||  | ||||||||    ||||||||||| || ||||||||||    
T  28338614 tactttccggaagatgttcgcgggaagaaggagatcgagttccttgagttgaagcaagggaacatgtctgtgacagagtatgctgccaagtttgtggagc 28338713  T
Q  370 ttgcaaagttctaccc 385  Q
    |  ||||||| |||||    
T  28338714 tgtcaaagttttaccc 28338729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 255 - 340
Target Start/End: Complemental strand, 19882027 - 19881942
Alignment:
Q  255 gaatttctgaacaggtacttcccggaagatgtccgaggtaggaaggagatcgaatttctggagttgaagcagggtgatatgtctgt 340  Q
    ||||| ||||| |||||||| |||||||||||||| || | ||| || || ||||| || |||||||| || ||||| ||||||||    
T  19882027 gaattcctgaataggtactttccggaagatgtccgtggcaagaaagaaattgaattcctagagttgaaacaaggtgacatgtctgt 19881942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 262 - 367
Target Start/End: Original strand, 30677690 - 30677795
Alignment:
Q  262 tgaacaggtacttcccggaagatgtccgaggtaggaaggagatcgaatttctggagttgaagcagggtgatatgtctgttgttgagtatgctgcaaaatt 361  Q
    |||||| |||||| ||||||||||| ||  | | ||||||||| ||||||||  |||||||| ||||||| ||||| ||    ||||||||||| || ||    
T  30677690 tgaacatgtactttccggaagatgttcgcaggaagaaggagattgaatttcttcagttgaagtagggtgacatgtcggtgaccgagtatgctgctaagtt 30677789  T
Q  362 tgtgga 367  Q
    ||||||    
T  30677790 tgtgga 30677795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 270 - 370
Target Start/End: Original strand, 23084490 - 23084590
Alignment:
Q  270 tacttcccggaagatgtccgaggtaggaaggagatcgaatttctggagttgaagcagggtgatatgtctgttgttgagtatgctgcaaaatttgtggagc 369  Q
    ||||| || |||||||| || || | ||| ||||| || ||||| ||| ||||||||||||||| ||| ||   ||||||||||| ||| ||||||||||    
T  23084490 tactttcctgaagatgttcgcgggaagaaagagattgagtttcttgagctgaagcagggtgataagtcagtgactgagtatgctggaaagtttgtggagc 23084589  T
Q  370 t 370  Q
    |    
T  23084590 t 23084590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0243 (Bit Score: 75; Significance: 2e-34; HSPs: 1)
Name: scaffold0243
Description:

Target: scaffold0243; HSP #1
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 255 - 409
Target Start/End: Original strand, 9282 - 9436
Alignment:
Q  255 gaatttctgaacaggtacttcccggaagatgtccgaggtaggaaggagatcgaatttctggagttgaagcagggtgatatgtctgttgttgagtatgctg 354  Q
    ||||| ||||| |||||||| ||||| ||||| ||||| | ||||||||| || ||||||||| ||||||||||||| |||||||||  ||| |||||||    
T  9282 gaattcctgaataggtactttccggaggatgttcgaggaaagaaggagattgagtttctggagctgaagcagggtgacatgtctgttactgaatatgctg 9381  T
Q  355 caaaatttgtggagcttgcaaagttctacccccattatgctccggagacagctga 409  Q
    | || ||||||||||||||||||||||||||||||||| |  |||||| ||||||    
T  9382 ctaagtttgtggagcttgcaaagttctacccccattataccgcggagaaagctga 9436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 75; Significance: 2e-34; HSPs: 20)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 255 - 409
Target Start/End: Complemental strand, 19858087 - 19857933
Alignment:
Q  255 gaatttctgaacaggtacttcccggaagatgtccgaggtaggaaggagatcgaatttctggagttgaagcagggtgatatgtctgttgttgagtatgctg 354  Q
    ||||| ||||| |||||||||||||| ||||||||||||| ||||||||| || ||||||||| |||||||||| ||||||||||||   || |||||||    
T  19858087 gaattcctgaataggtacttcccggaggatgtccgaggtaagaaggagattgagtttctggagctgaagcagggggatatgtctgttacagaatatgctg 19857988  T
Q  355 caaaatttgtggagcttgcaaagttctacccccattatgctccggagacagctga 409  Q
    | || ||||||||  |||| |||||||||||||| ||| || |||||||||||||    
T  19857987 cgaagtttgtggaagttgctaagttctacccccactatactgcggagacagctga 19857933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 255 - 409
Target Start/End: Original strand, 20832478 - 20832632
Alignment:
Q  255 gaatttctgaacaggtacttcccggaagatgtccgaggtaggaaggagatcgaatttctggagttgaagcagggtgatatgtctgttgttgagtatgctg 354  Q
    ||||| ||||| |||||||||| ||||||||||||||| | ||| ||||| |||||||||||| ||||||||||||| ||||||||    ||||||| ||    
T  20832478 gaattcctgaataggtacttcctggaagatgtccgaggaaagaaagagattgaatttctggagctgaagcagggtgacatgtctgtcacagagtatgttg 20832577  T
Q  355 caaaatttgtggagcttgcaaagttctacccccattatgctccggagacagctga 409  Q
    | || |||||||| ||||| ||||||||||| |||||| || |||||||||||||    
T  20832578 ctaagtttgtggaacttgctaagttctaccctcattatactgcggagacagctga 20832632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 255 - 409
Target Start/End: Original strand, 21742129 - 21742283
Alignment:
Q  255 gaatttctgaacaggtacttcccggaagatgtccgaggtaggaaggagatcgaatttctggagttgaagcagggtgatatgtctgttgttgagtatgctg 354  Q
    ||||||||||||| |||||| ||||| ||||||||||||| ||| ||||| || ||||||||  |||| || ||||||||||| ||   |||||||||||    
T  21742129 gaatttctgaacatgtactttccggaggatgtccgaggtaagaaagagattgagtttctggaaatgaaacaaggtgatatgtcggtaactgagtatgctg 21742228  T
Q  355 caaaatttgtggagcttgcaaagttctacccccattatgctccggagacagctga 409  Q
    | || ||||||||||||||||| || || || || ||| || |||||||||||||    
T  21742229 ctaagtttgtggagcttgcaaaattttatccacactatactacggagacagctga 21742283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 255 - 409
Target Start/End: Original strand, 21738613 - 21738767
Alignment:
Q  255 gaatttctgaacaggtacttcccggaagatgtccgaggtaggaaggagatcgaatttctggagttgaagcagggtgatatgtctgttgttgagtatgctg 354  Q
    |||||| ||||||||||||| ||||| ||||||||||||| |||||| || ||||||||||| ||||| ||||| || ||||||||    ||||||||||    
T  21738613 gaatttatgaacaggtactttccggaggatgtccgaggtaagaaggaaattgaatttctggaattgaaacagggggacatgtctgtgacggagtatgctg 21738712  T
Q  355 caaaatttgtggagcttgcaaagttctacccccattatgctccggagacagctga 409  Q
    | || |||||||| || || |||||||| || || ||| || ||||||| |||||    
T  21738713 cgaagtttgtggaactcgctaagttctatcctcactatactgcggagactgctga 21738767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 277 - 412
Target Start/End: Complemental strand, 21961819 - 21961684
Alignment:
Q  277 cggaagatgtccgaggtaggaaggagatcgaatttctggagttgaagcagggtgatatgtctgttgttgagtatgctgcaaaatttgtggagcttgcaaa 376  Q
    |||||||||||||||| | |||||| || || |||||||||||||| ||||||||| ||||||||   |||||||| || || |||||||| ||||| ||    
T  21961819 cggaagatgtccgaggcaagaaggaaattgagtttctggagttgaaacagggtgatttgtctgttacggagtatgccgctaagtttgtggaacttgctaa 21961720  T
Q  377 gttctacccccattatgctccggagacagctgaatt 412  Q
    ||||||||| |||||   |  |||||||||||||||    
T  21961719 gttctaccctcattacagtgtggagacagctgaatt 21961684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 289 - 409
Target Start/End: Complemental strand, 37680828 - 37680708
Alignment:
Q  289 gaggtaggaaggagatcgaatttctggagttgaagcagggtgatatgtctgttgttgagtatgctgcaaaatttgtggagcttgcaaagttctaccccca 388  Q
    |||||| ||||||||| |||||||||||||||||  ||||||| ||||||||    |||||||||||||| |||||||||||||| |  ||||| || ||    
T  37680828 gaggtaagaaggagattgaatttctggagttgaaatagggtgacatgtctgtcacagagtatgctgcaaagtttgtggagcttgccacattctatcctca 37680729  T
Q  389 ttatgctccggagacagctga 409  Q
    ||||  | |||||||||||||    
T  37680728 ttatagtgcggagacagctga 37680708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 282 - 373
Target Start/End: Complemental strand, 48426659 - 48426568
Alignment:
Q  282 gatgtccgaggtaggaaggagatcgaatttctggagttgaagcagggtgatatgtctgttgttgagtatgctgcaaaatttgtggagcttgc 373  Q
    |||||| |||||| ||| ||||| ||||||||||||||||| |||||||| ||||||||    |||||||||||||| ||||||||||||||    
T  48426659 gatgtcagaggtaagaaagagattgaatttctggagttgaaacagggtgacatgtctgtcacagagtatgctgcaaagtttgtggagcttgc 48426568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 255 - 409
Target Start/End: Original strand, 20853337 - 20853491
Alignment:
Q  255 gaatttctgaacaggtacttcccggaagatgtccgaggtaggaaggagatcgaatttctggagttgaagcagggtgatatgtctgttgttgagtatgctg 354  Q
    ||||| ||||| || ||||| ||||||||||||||||| | ||| || || |||||||||||||||||||||||||| ||||||||    ||||||||||    
T  20853337 gaattcctgaatagatactttccggaagatgtccgagggaagaaagaaatagaatttctggagttgaagcagggtgacatgtctgtcacagagtatgctg 20853436  T
Q  355 caaaatttgtggagcttgcaaagttctacccccattatgctccggagacagctga 409  Q
    | || ||   ||| ||||||||||| || || || ||  || |||||||||||||    
T  20853437 ccaagttcacggaacttgcaaagttttatcctcactacactgcggagacagctga 20853491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 258 - 385
Target Start/End: Original strand, 38909406 - 38909533
Alignment:
Q  258 tttctgaacaggtacttcccggaagatgtccgaggtaggaaggagatcgaatttctggagttgaagcagggtgatatgtctgttgttgagtatgctgcaa 357  Q
    |||||||  |||||||| ||||| |||||| |||||| ||| || || || ||||||||| |||| |||||||||||||| |||   ||||||||||| |    
T  38909406 tttctgagtaggtactttccggaggatgtcagaggtaagaaagaaattgagtttctggagctgaaacagggtgatatgtccgttacggagtatgctgcta 38909505  T
Q  358 aatttgtggagcttgcaaagttctaccc 385  Q
      |||||||| ||||| |||||||||||    
T  38909506 ggtttgtggaacttgccaagttctaccc 38909533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 258 - 391
Target Start/End: Complemental strand, 52989550 - 52989417
Alignment:
Q  258 tttctgaacaggtacttcccggaagatgtccgaggtaggaaggagatcgaatttctggagttgaagcagggtgatatgtctgttgttgagtatgctgcaa 357  Q
    |||||| ||||||| || || || |||||  |||||| ||| ||||| || |||||||||||||| |||||||| ||||| ||    ||||||||||| |    
T  52989550 tttctggacaggtattttccagaggatgttagaggtaagaaagagattgagtttctggagttgaaacagggtgacatgtccgtcacggagtatgctgcta 52989451  T
Q  358 aatttgtggagcttgcaaagttctacccccatta 391  Q
      |||||||||||||| ||||||||||| |||||    
T  52989450 ggtttgtggagcttgctaagttctaccctcatta 52989417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 266 - 409
Target Start/End: Complemental strand, 18273569 - 18273426
Alignment:
Q  266 caggtacttcccggaagatgtccgaggtaggaaggagatcgaatttctggagttgaagcagggtgatatgtctgttgttgagtatgctgcaaaatttgtg 365  Q
    ||||||||| |||||||||||||| || | ||| |||||||| ||||| ||  |||| || || |||||||| ||   |||||||||||| || ||||||    
T  18273569 caggtactttccggaagatgtccgtggaaagaaagagatcgagtttcttgaactgaaacaaggagatatgtcggtaactgagtatgctgctaagtttgtg 18273470  T
Q  366 gagcttgcaaagttctacccccattatgctccggagacagctga 409  Q
    ||||||||||| || || || |||||| || | ||||| |||||    
T  18273469 gagcttgcaaaattttatccacattatactgctgagactgctga 18273426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 282 - 372
Target Start/End: Complemental strand, 20298169 - 20298079
Alignment:
Q  282 gatgtccgaggtaggaaggagatcgaatttctggagttgaagcagggtgatatgtctgttgttgagtatgctgcaaaatttgtggagcttg 372  Q
    |||||| |||||| ||| |||||||| |||||||||||||| |||||||| || || |||   |||||||||||||| |||||||| ||||    
T  20298169 gatgtcagaggtaagaaagagatcgagtttctggagttgaaacagggtgacatatccgttacggagtatgctgcaaagtttgtggaacttg 20298079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 270 - 337
Target Start/End: Original strand, 16670500 - 16670567
Alignment:
Q  270 tacttcccggaagatgtccgaggtaggaaggagatcgaatttctggagttgaagcagggtgatatgtc 337  Q
    ||||| ||||||||||||||||| | ||| || || ||||||||||||||||| |||||||| |||||    
T  16670500 tactttccggaagatgtccgagggaagaaagaaatagaatttctggagttgaaacagggtgacatgtc 16670567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 282 - 409
Target Start/End: Original strand, 20074313 - 20074440
Alignment:
Q  282 gatgtccgaggtaggaaggagatcgaatttctggagttgaagcagggtgatatgtctgttgttgagtatgctgcaaaatttgtggagcttgcaaagttct 381  Q
    |||||| ||||||  |||||||| || |||| ||||||||| || ||||| ||||| ||    |||||||||||||| |||||||| ||||| | |||||    
T  20074313 gatgtcagaggtaacaaggagattgagtttcaggagttgaaacaaggtgacatgtccgtcacggagtatgctgcaaagtttgtggaacttgctacgttct 20074412  T
Q  382 acccccattatgctccggagacagctga 409  Q
    |||| |||||   | |||||||||||||    
T  20074413 accctcattacagtgcggagacagctga 20074440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 270 - 385
Target Start/End: Original strand, 17041608 - 17041723
Alignment:
Q  270 tacttcccggaagatgtccgaggtaggaaggagatcgaatttctggagttgaagcagggtgatatgtctgttgttgagtatgctgcaaaatttgtggagc 369  Q
    ||||| ||||||||||| || || | ||||||||||||||| || ||| ||||||| ||  | ||||||||    ||||||||||| || || ||||||     
T  17041608 tactttccggaagatgttcgcgggaagaaggagatcgaattccttgagctgaagcaaggaaacatgtctgtgacagagtatgctgccaagttcgtggagt 17041707  T
Q  370 ttgcaaagttctaccc 385  Q
    | ||||||||||||||    
T  17041708 tggcaaagttctaccc 17041723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 264 - 379
Target Start/End: Complemental strand, 20922212 - 20922097
Alignment:
Q  264 aacaggtacttcccggaagatgtccgaggtaggaaggagatcgaatttctggagttgaagcagggtgatatgtctgttgttgagtatgctgcaaaatttg 363  Q
    ||||| ||||| || |||||||| || || | ||| ||||| ||||| |||||||||||||||||||| ||||| ||    || ||||||||||| |||     
T  20922212 aacagatactttccagaagatgttcgcgggaagaaagagattgaattcctggagttgaagcagggtgacatgtcagtgtccgactatgctgcaaagttta 20922113  T
Q  364 tggagcttgcaaagtt 379  Q
    ||||||| || |||||    
T  20922112 tggagctggctaagtt 20922097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 264 - 379
Target Start/End: Original strand, 21044740 - 21044855
Alignment:
Q  264 aacaggtacttcccggaagatgtccgaggtaggaaggagatcgaatttctggagttgaagcagggtgatatgtctgttgttgagtatgctgcaaaatttg 363  Q
    ||||| ||||| ||||||||||| ||||| | ||| ||||| || || || ||| ||||||| ||  ||||||| ||  |||| ||||||||||| ||||    
T  21044740 aacagatactttccggaagatgttcgagggaagaaagagattgagttccttgaggtgaagcaaggaaatatgtcagtgattgaatatgctgcaaagtttg 21044839  T
Q  364 tggagcttgcaaagtt 379  Q
    ||||||| || |||||    
T  21044840 tggagctagctaagtt 21044855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 264 - 409
Target Start/End: Complemental strand, 21752820 - 21752675
Alignment:
Q  264 aacaggtacttcccggaagatgtccgaggtaggaaggagatcgaatttctggagttgaagcagggtgatatgtctgttgttgagtatgctgcaaaatttg 363  Q
    ||||| ||||||||||||||||| || || | ||| |||||||| || || ||| ||||||| ||  | ||||||||    ||||||||||| || ||||    
T  21752820 aacagatacttcccggaagatgttcgcgggaagaaagagatcgagttccttgagctgaagcaaggaaacatgtctgtgacagagtatgctgccaagtttg 21752721  T
Q  364 tggagcttgcaaagttctacccccattatgctccggagacagctga 409  Q
    ||||| | |||||||| || || |||||| || | ||||| |||||    
T  21752720 tggagttggcaaagttttatccgcattatactgcagagactgctga 21752675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 256 - 412
Target Start/End: Original strand, 20047133 - 20047289
Alignment:
Q  256 aatttctgaacaggtacttcccggaagatgtccgaggtaggaaggagatcgaatttctggagttgaagcagggtgatatgtctgttgttgagtatgctgc 355  Q
    |||| ||||| ||||| || ||||| |||||||| || | |||||| || |||||  | |||||||| |||||||| ||||||||    || ||||||||    
T  20047133 aattcctgaataggtattttccggaggatgtccgtggcaagaaggaaattgaattcttagagttgaaacagggtgacatgtctgtcacggaatatgctgc 20047232  T
Q  356 aaaatttgtggagcttgcaaagttctacccccattatgctccggagacagctgaatt 412  Q
    ||| ||   |||||| || ||||| || || |||||| || ||||||| ||||||||    
T  20047233 aaagttcacggagctggccaagttttatcctcattatactgcggagacggctgaatt 20047289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 258 - 385
Target Start/End: Original strand, 31536577 - 31536704
Alignment:
Q  258 tttctgaacaggtacttcccggaagatgtccgaggtaggaaggagatcgaatttctggagttgaagc-agggtgatatgtctgttgttgagtatgctgca 356  Q
    |||||||  |||||||| ||||| |||||| |||||| ||| || || || ||||||||| |||| | ||||||||||||| |||   |||||||||||     
T  31536577 tttctgagtaggtactttccggaggatgtcagaggtaagaaagaaattgagtttctggagctgaaaccagggtgatatgtccgttacggagtatgctgct 31536676  T
Q  357 aaatttgtggagcttgcaaagttctaccc 385  Q
    |  ||||| || ||||| |||||||||||    
T  31536677 aggtttgt-gaacttgccaagttctaccc 31536704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0020 (Bit Score: 74; Significance: 8e-34; HSPs: 2)
Name: scaffold0020
Description:

Target: scaffold0020; HSP #1
Raw Score: 74; E-Value: 8e-34
Query Start/End: Original strand, 255 - 412
Target Start/End: Original strand, 98091 - 98248
Alignment:
Q  255 gaatttctgaacaggtacttcccggaagatgtccgaggtaggaaggagatcgaatttctggagttgaagcagggtgatatgtctgttgttgagtatgctg 354  Q
    ||||| ||||| |||||||||||||||||||||||||| | ||| ||||| |||||||||||| |||| |||||||| ||||||||    ||||||||||    
T  98091 gaattcctgaataggtacttcccggaagatgtccgagggaagaaagagattgaatttctggagctgaaacagggtgacatgtctgtcacagagtatgctg 98190  T
Q  355 caaaatttgtggagcttgcaaagttctacccccattatgctccggagacagctgaatt 412  Q
    | || ||| |||| ||||||||||| ||||| |||||| || ||||||||||||||||    
T  98191 ctaagtttatggaacttgcaaagttttaccctcattatactacggagacagctgaatt 98248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0020; HSP #2
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 258 - 392
Target Start/End: Complemental strand, 176771 - 176637
Alignment:
Q  258 tttctgaacaggtacttcccggaagatgtccgaggtaggaaggagatcgaatttctggagttgaagcagggtgatatgtctgttgttgagtatgctgcaa 357  Q
    |||||||||||||| || ||||| ||||||||||||| ||| || || ||||||||||||||||||||||| |||||||||||   ||||||||  || |    
T  176771 tttctgaacaggtattttccggaggatgtccgaggtaagaaagaaattgaatttctggagttgaagcagggagatatgtctgtgactgagtatgtagcta 176672  T
Q  358 aatttgtggagcttgcaaagttctacccccattat 392  Q
    | ||||||||||||||||| || ||||| ||||||    
T  176671 agtttgtggagcttgcaaaattttacccacattat 176637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0034 (Bit Score: 71; Significance: 5e-32; HSPs: 3)
Name: scaffold0034
Description:

Target: scaffold0034; HSP #1
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 250 - 388
Target Start/End: Original strand, 11409 - 11547
Alignment:
Q  250 gtactgaatttctgaacaggtacttcccggaagatgtccgaggtaggaaggagatcgaatttctggagttgaagcagggtgatatgtctgttgttgagta 349  Q
    |||| |||||| ||||||||||||||||||||||||||||||| | ||||||||| || ||| ||||| ||||||||| ||| ||||||||    |||||    
T  11409 gtacagaatttatgaacaggtacttcccggaagatgtccgaggaaagaaggagattgagtttttggagctgaagcaggctgacatgtctgtcacagagta 11508  T
Q  350 tgctgcaaaatttgtggagcttgcaaagttctaccccca 388  Q
    |||||| || |||||||| ||||||||||||||||||||    
T  11509 tgctgctaagtttgtggaacttgcaaagttctaccccca 11547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0034; HSP #2
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 255 - 388
Target Start/End: Original strand, 1460 - 1593
Alignment:
Q  255 gaatttctgaacaggtacttcccggaagatgtccgaggtaggaaggagatcgaatttctggagttgaagcagggtgatatgtctgttgttgagtatgctg 354  Q
    ||||| ||||| ||||||||  |||| ||||||||||| | ||||||||| |||||||||||| ||||||||||||||||||| |||    | |||| ||    
T  1460 gaattcctgaataggtacttttcggaggatgtccgaggaaagaaggagattgaatttctggagctgaagcagggtgatatgtcagttacaaaatatgttg 1559  T
Q  355 caaaatttgtggagcttgcaaagttctaccccca 388  Q
    |||| || ||||| ||||| ||| ||||||||||    
T  1560 caaagttcgtggaacttgctaagctctaccccca 1593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0034; HSP #3
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 255 - 409
Target Start/End: Complemental strand, 71168 - 71014
Alignment:
Q  255 gaatttctgaacaggtacttcccggaagatgtccgaggtaggaaggagatcgaatttctggagttgaagcagggtgatatgtctgttgttgagtatgctg 354  Q
    ||||| ||||| |||||||| ||||| ||||||||||| | ||| || |||||||| |||||||||||| ||||||| ||||||||    ||||||||||    
T  71168 gaattcctgaataggtactttccggaggatgtccgaggaaagaaagaaatcgaattcctggagttgaagtagggtgacatgtctgtcacagagtatgctg 71069  T
Q  355 caaaatttgtggagcttgcaaagttctacccccattatgctccggagacagctga 409  Q
    | || ||   ||| ||||||||||| || || || ||  || |||||||||||||    
T  71068 ctaagttcacggaacttgcaaagttttatcctcactacactgcggagacagctga 71014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0188 (Bit Score: 70; Significance: 2e-31; HSPs: 1)
Name: scaffold0188
Description:

Target: scaffold0188; HSP #1
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 267 - 412
Target Start/End: Original strand, 32892 - 33037
Alignment:
Q  267 aggtacttcccggaagatgtccgaggtaggaaggagatcgaatttctggagttgaagcagggtgatatgtctgttgttgagtatgctgcaaaatttgtgg 366  Q
    |||||||||||||||||||||||||||| ||| ||||| || |||||||| ||||||||||| ||||| ||||||   |||||||||||||| || ||||    
T  32892 aggtacttcccggaagatgtccgaggtaagaaagagattgagtttctggaattgaagcagggagatatttctgttacggagtatgctgcaaagttcgtgg 32991  T
Q  367 agcttgcaaagttctacccccattatgctccggagacagctgaatt 412  Q
    | ||||| |||||||||||||||||   | |||||||||| |||||    
T  32992 aacttgctaagttctacccccattacagtgcggagacagcggaatt 33037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004 (Bit Score: 70; Significance: 2e-31; HSPs: 1)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 255 - 412
Target Start/End: Complemental strand, 320039 - 319882
Alignment:
Q  255 gaatttctgaacaggtacttcccggaagatgtccgaggtaggaaggagatcgaatttctggagttgaagcagggtgatatgtctgttgttgagtatgctg 354  Q
    ||||| ||||| ||||||||||| || ||||||||||| | |||||| || |||||||||||| ||||||||||||| ||||||||    ||||||||||    
T  320039 gaattcctgaataggtacttcccagaggatgtccgaggaaagaaggaaattgaatttctggagctgaagcagggtgacatgtctgtcacagagtatgctg 319940  T
Q  355 caaaatttgtggagcttgcaaagttctacccccattatgctccggagacagctgaatt 412  Q
    | || |||||||| ||||||||||||||||| |||||| |  ||||||||||| ||||    
T  319939 ctaagtttgtggaacttgcaaagttctaccctcattataccgcggagacagcttaatt 319882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0203 (Bit Score: 69; Significance: 8e-31; HSPs: 1)
Name: scaffold0203
Description:

Target: scaffold0203; HSP #1
Raw Score: 69; E-Value: 8e-31
Query Start/End: Original strand, 256 - 412
Target Start/End: Original strand, 3560 - 3716
Alignment:
Q  256 aatttctgaacaggtacttcccggaagatgtccgaggtaggaaggagatcgaatttctggagttgaagcagggtgatatgtctgttgttgagtatgctgc 355  Q
    |||| ||||| |||||||||||||||||||||||||| | ||| |||||  ||||| ||||  ||||||||||||| ||||||||    |||||||||||    
T  3560 aattcctgaataggtacttcccggaagatgtccgaggaaagaaagagattaaatttttggatctgaagcagggtgacatgtctgtcacagagtatgctgc 3659  T
Q  356 aaaatttgtggagcttgcaaagttctacccccattatgctccggagacagctgaatt 412  Q
    ||| |||||||| ||||| ||||||||||| |||||| || ||||||||| ||||||    
T  3660 aaagtttgtggaacttgctaagttctaccctcattatactgcggagacagttgaatt 3716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0010 (Bit Score: 67; Significance: 1e-29; HSPs: 3)
Name: scaffold0010
Description:

Target: scaffold0010; HSP #1
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 255 - 409
Target Start/End: Original strand, 38843 - 38997
Alignment:
Q  255 gaatttctgaacaggtacttcccggaagatgtccgaggtaggaaggagatcgaatttctggagttgaagcagggtgatatgtctgttgttgagtatgctg 354  Q
    ||||| ||||| |||||||||||| | ||||||||||| | |||||| || || ||||||||| ||||||||||||| ||||||||| | || |||||||    
T  38843 gaattcctgaataggtacttcccgaaggatgtccgaggaaagaaggaaattgagtttctggagctgaagcagggtgacatgtctgttatagaatatgctg 38942  T
Q  355 caaaatttgtggagcttgcaaagttctacccccattatgctccggagacagctga 409  Q
    | || |||||||| ||| |||||||||||||||| ||| |  |||||||||||||    
T  38943 ctaagtttgtggaactttcaaagttctacccccactataccgcggagacagctga 38997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0010; HSP #2
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 255 - 385
Target Start/End: Original strand, 180347 - 180477
Alignment:
Q  255 gaatttctgaacaggtacttcccggaagatgtccgaggtaggaaggagatcgaatttctggagttgaagcagggtgatatgtctgttgttgagtatgctg 354  Q
    ||||| ||||| || ||||| ||||||||||||||||| | |||||| || |||||||||||||||||||| ||||| || || ||    |||||||| |    
T  180347 gaattcctgaatagatactttccggaagatgtccgagggaagaaggaaatagaatttctggagttgaagcaaggtgacatatcggtcacggagtatgcag 180446  T
Q  355 caaaatttgtggagcttgcaaagttctaccc 385  Q
    |||||||   ||| ||||||||||| |||||    
T  180447 caaaattcacggaacttgcaaagttttaccc 180477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0010; HSP #3
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 345 - 409
Target Start/End: Complemental strand, 15130 - 15066
Alignment:
Q  345 gagtatgctgcaaaatttgtggagcttgcaaagttctacccccattatgctccggagacagctga 409  Q
    ||||||||||| || ||||||||| | ||||||||||| || ||||||||| | ||||| |||||    
T  15130 gagtatgctgccaagtttgtggagttggcaaagttctatccgcattatgctgctgagactgctga 15066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0074 (Bit Score: 66; Significance: 5e-29; HSPs: 1)
Name: scaffold0074
Description:

Target: scaffold0074; HSP #1
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 255 - 412
Target Start/End: Complemental strand, 15868 - 15711
Alignment:
Q  255 gaatttctgaacaggtacttcccggaagatgtccgaggtaggaaggagatcgaatttctggagttgaagcagggtgatatgtctgttgttgagtatgctg 354  Q
    ||||| ||||| |||||||||||||||||||||||||| |  || || ||||||||||| ||| | ||| ||||||| ||||||||    ||||||||||    
T  15868 gaattcctgaataggtacttcccggaagatgtccgaggaaacaaagaaatcgaatttctagagctaaagaagggtgacatgtctgtcacagagtatgctg 15769  T
Q  355 caaaatttgtggagcttgcaaagttctacccccattatgctccggagacagctgaatt 412  Q
    |||| |||||||| ||||| ||||||||||| |||||| || | ||||||||||||||    
T  15768 caaagtttgtggaacttgctaagttctaccctcattatactgctgagacagctgaatt 15711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0420 (Bit Score: 64; Significance: 8e-28; HSPs: 1)
Name: scaffold0420
Description:

Target: scaffold0420; HSP #1
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 261 - 412
Target Start/End: Complemental strand, 9404 - 9253
Alignment:
Q  261 ctgaacaggtacttcccggaagatgtccgaggtaggaaggagatcgaatttctggagttgaagcagggtgatatgtctgttgttgagtatgctgcaaaat 360  Q
    ||||| |||||||||| ||||||||||||||| | ||||||||| || ||| ||||| ||||||||||||| |||| |||    ||||||||| | || |    
T  9404 ctgaataggtacttcctggaagatgtccgaggaaagaaggagattgagtttttggagctgaagcagggtgacatgtatgtcacagagtatgctacgaagt 9305  T
Q  361 ttgtggagcttgcaaagttctacccccattatgctccggagacagctgaatt 412  Q
    ||||||| ||||| ||||||||||| |||||| || ||||||||||||||||    
T  9304 ttgtggaacttgctaagttctaccctcattatactgcggagacagctgaatt 9253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0235 (Bit Score: 63; Significance: 3e-27; HSPs: 2)
Name: scaffold0235
Description:

Target: scaffold0235; HSP #1
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 255 - 409
Target Start/End: Original strand, 7970 - 8124
Alignment:
Q  255 gaatttctgaacaggtacttcccggaagatgtccgaggtaggaaggagatcgaatttctggagttgaagcagggtgatatgtctgttgttgagtatgctg 354  Q
    ||||| ||||| |||||||| | ||| ||||||||||| | |||| |||| || ||||||||||||||||||||||| ||||||||    ||||||||||    
T  7970 gaattcctgaataggtactttctggaggatgtccgaggcaagaagaagattgagtttctggagttgaagcagggtgacatgtctgtcacagagtatgctg 8069  T
Q  355 caaaatttgtggagcttgcaaagttctacccccattatgctccggagacagctga 409  Q
    |||| |||||||| ||||| |||||||||||||| ||| |   ||||||||||||    
T  8070 caaagtttgtggaacttgctaagttctacccccactataccgtggagacagctga 8124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0235; HSP #2
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 255 - 409
Target Start/End: Original strand, 18184 - 18338
Alignment:
Q  255 gaatttctgaacaggtacttcccggaagatgtccgaggtaggaaggagatcgaatttctggagttgaagcagggtgatatgtctgttgttgagtatgctg 354  Q
    ||||| ||||| |||||||| | ||| ||||||||||| | |||| |||| || ||||||||||||||||||||||| ||||||||    ||||||||||    
T  18184 gaattcctgaataggtactttctggaggatgtccgaggcaagaagaagattgagtttctggagttgaagcagggtgacatgtctgtcacagagtatgctg 18283  T
Q  355 caaaatttgtggagcttgcaaagttctacccccattatgctccggagacagctga 409  Q
    |||| |||||||| ||||| |||||||||||||| ||| |   ||||||||||||    
T  18284 caaagtttgtggaacttgctaagttctacccccactataccgtggagacagctga 18338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0222 (Bit Score: 63; Significance: 3e-27; HSPs: 2)
Name: scaffold0222
Description:

Target: scaffold0222; HSP #1
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 255 - 409
Target Start/End: Complemental strand, 21562 - 21408
Alignment:
Q  255 gaatttctgaacaggtacttcccggaagatgtccgaggtaggaaggagatcgaatttctggagttgaagcagggtgatatgtctgttgttgagtatgctg 354  Q
    ||||| ||||| ||||||| |||||| |||||||| || | ||||||||| |||||||| ||| ||||||||||||| ||||| |||   || |||||||    
T  21562 gaattcctgaataggtactacccggaggatgtccggggaaagaaggagattgaatttctagagctgaagcagggtgacatgtcagttacagaatatgctg 21463  T
Q  355 caaaatttgtggagcttgcaaagttctacccccattatgctccggagacagctga 409  Q
    | || |||||||| |||||||||||||||||||| ||| |  |||||||||||||    
T  21462 ctaagtttgtggaacttgcaaagttctacccccactataccgcggagacagctga 21408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0222; HSP #2
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 300 - 412
Target Start/End: Original strand, 40 - 152
Alignment:
Q  300 gagatcgaatttctggagttgaagcagggtgatatgtctgttgttgagtatgctgcaaaatttgtggagcttgcaaagttctacccccattatgctccgg 399  Q
    ||||| || ||| ||||| ||||||||||||| ||||| ||  | |||||||||||||| |||||||| ||||| ||||||||||| |||||| || |||    
T  40 gagattgagtttttggagctgaagcagggtgacatgtcagtcatagagtatgctgcaaagtttgtggaacttgctaagttctaccctcattatactgcgg 139  T
Q  400 agacagctgaatt 412  Q
    |||||||||||||    
T  140 agacagctgaatt 152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0106 (Bit Score: 63; Significance: 3e-27; HSPs: 1)
Name: scaffold0106
Description:

Target: scaffold0106; HSP #1
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 255 - 409
Target Start/End: Complemental strand, 35133 - 34979
Alignment:
Q  255 gaatttctgaacaggtacttcccggaagatgtccgaggtaggaaggagatcgaatttctggagttgaagcagggtgatatgtctgttgttgagtatgctg 354  Q
    ||||| ||||| ||||| || ||||| ||||||||||||| ||||||||| |||||||| ||| |||| ||||| |||||||||||| | ||||||||||    
T  35133 gaattcctgaataggtattttccggaggatgtccgaggtaagaaggagattgaatttctagagctgaaacagggggatatgtctgttatagagtatgctg 35034  T
Q  355 caaaatttgtggagcttgcaaagttctacccccattatgctccggagacagctga 409  Q
    | || ||| |||| ||||| |||||||| || || ||| || |||||||||||||    
T  35033 cgaagtttatggaacttgctaagttctatcctcactatactgcggagacagctga 34979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0664 (Bit Score: 62; Significance: 1e-26; HSPs: 1)
Name: scaffold0664
Description:

Target: scaffold0664; HSP #1
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 255 - 412
Target Start/End: Complemental strand, 253 - 96
Alignment:
Q  255 gaatttctgaacaggtacttcccggaagatgtccgaggtaggaaggagatcgaatttctggagttgaagcagggtgatatgtctgttgttgagtatgctg 354  Q
    ||||| ||||| |||||||||||||||||||||||||  |  || || ||  ||||||| ||| | ||| ||||||| ||||||||  | ||||||||||    
T  253 gaattcctgaataggtacttcccggaagatgtccgagtaaataaagatatttaatttcttgagcttaagaagggtgacatgtctgtcatagagtatgctg 154  T
Q  355 caaaatttgtggagcttgcaaagttctacccccattatgctccggagacagctgaatt 412  Q
    |||| |||||||| ||||| ||||||||||| |||||| || ||||||||||||||||    
T  153 caaagtttgtggaacttgctaagttctaccctcattatactgcggagacagctgaatt 96  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0167 (Bit Score: 62; Significance: 1e-26; HSPs: 1)
Name: scaffold0167
Description:

Target: scaffold0167; HSP #1
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 255 - 388
Target Start/End: Complemental strand, 5849 - 5716
Alignment:
Q  255 gaatttctgaacaggtacttcccggaagatgtccgaggtaggaaggagatcgaatttctggagttgaagcagggtgatatgtctgttgttgagtatgctg 354  Q
    ||||| ||||| |||||||||||||| ||||||||||| | ||||||||| |||||||| ||| ||||||||||||||||||| |||   || |||||||    
T  5849 gaattcctgaataggtacttcccggaggatgtccgaggaaagaaggagattgaatttctagagctgaagcagggtgatatgtcagttacagaatatgctg 5750  T
Q  355 caaaatttgtggagcttgcaaagttctaccccca 388  Q
    | |  |||||||| |||| |||||||||||||||    
T  5749 ctatgtttgtggaacttgaaaagttctaccccca 5716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1517 (Bit Score: 61; Significance: 5e-26; HSPs: 1)
Name: scaffold1517
Description:

Target: scaffold1517; HSP #1
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 258 - 409
Target Start/End: Original strand, 1000 - 1149
Alignment:
Q  258 tttctgaacaggtacttcccggaagatgtccgaggtaggaaggagatcgaatttctggagttgaagcagggtgatatgtctgttgttgagtatgctgcaa 357  Q
    |||||||  |||||||||||||||||||||||||||| ||||||||| |||||| |||| ||||| ||||||||||||||   |   ||||||||||| |    
T  1000 tttctgagtaggtacttcccggaagatgtccgaggtaagaaggagattgaatttttggaattgaaacagggtgatatgtc--ctacggagtatgctgcta 1097  T
Q  358 aatttgtggagcttgcaaagttctacccccattatgctccggagacagctga 409  Q
    | |||||||| ||||| ||||||||||| |||||   | |||||||||||||    
T  1098 agtttgtggaacttgctaagttctaccctcattacagtgcggagacagctga 1149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0586 (Bit Score: 61; Significance: 5e-26; HSPs: 1)
Name: scaffold0586
Description:

Target: scaffold0586; HSP #1
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 255 - 391
Target Start/End: Complemental strand, 362 - 226
Alignment:
Q  255 gaatttctgaacaggtacttcccggaagatgtccgaggtaggaaggagatcgaatttctggagttgaagcagggtgatatgtctgttgttgagtatgctg 354  Q
    ||||| ||||| |||||||| ||||| ||||||| ||| | ||| || || |||||||||||||||||||| || |||||||||||| | ||||||||||    
T  362 gaattcctgaataggtactttccggaggatgtccaaggaaagaaagaaattgaatttctggagttgaagcaaggggatatgtctgttatagagtatgctg 263  T
Q  355 caaaatttgtggagcttgcaaagttctacccccatta 391  Q
    |||| ||||| || ||||||||||| ||||| |||||    
T  262 caaagtttgtagaacttgcaaagttttaccctcatta 226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1433 (Bit Score: 60; Significance: 2e-25; HSPs: 1)
Name: scaffold1433
Description:

Target: scaffold1433; HSP #1
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 262 - 409
Target Start/End: Original strand, 826 - 973
Alignment:
Q  262 tgaacaggtacttcccggaagatgtccgaggtaggaaggagatcgaatttctggagttgaagcagggtgatatgtctgttgttgagtatgctgcaaaatt 361  Q
    |||| ||||| || ||||| ||||||||||||| ||| |||||||||||| |||||||||| ||||| ||||||||||||    | |||||||| || ||    
T  826 tgaataggtattttccggaggatgtccgaggtaagaaagagatcgaatttttggagttgaaacagggggatatgtctgttaccaaatatgctgctaagtt 925  T
Q  362 tgtggagcttgcaaagttctacccccattatgctccggagacagctga 409  Q
    |||  |||||||||||||||| |||||||||  | |||||||||||||    
T  926 tgtaaagcttgcaaagttctatccccattatagtgcggagacagctga 973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0404 (Bit Score: 60; Significance: 2e-25; HSPs: 1)
Name: scaffold0404
Description:

Target: scaffold0404; HSP #1
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 262 - 409
Target Start/End: Complemental strand, 8533 - 8386
Alignment:
Q  262 tgaacaggtacttcccggaagatgtccgaggtaggaaggagatcgaatttctggagttgaagcagggtgatatgtctgttgttgagtatgctgcaaaatt 361  Q
    |||| ||||| || ||||| ||||||||||||| ||| |||||||||||| |||||||||| ||||| ||||||||||||    | |||||||| || ||    
T  8533 tgaataggtattttccggaggatgtccgaggtaagaaagagatcgaatttttggagttgaaacagggggatatgtctgttaccaaatatgctgctaagtt 8434  T
Q  362 tgtggagcttgcaaagttctacccccattatgctccggagacagctga 409  Q
    |||  |||||||||||||||| |||||||||  | |||||||||||||    
T  8433 tgtaaagcttgcaaagttctatccccattatagtgcggagacagctga 8386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0192 (Bit Score: 60; Significance: 2e-25; HSPs: 1)
Name: scaffold0192
Description:

Target: scaffold0192; HSP #1
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 258 - 385
Target Start/End: Complemental strand, 30319 - 30192
Alignment:
Q  258 tttctgaacaggtacttcccggaagatgtccgaggtaggaaggagatcgaatttctggagttgaagcagggtgatatgtctgttgttgagtatgctgcaa 357  Q
    |||||||||||||| || ||||| ||||||||||||| ||||||||| ||||||||||| ||||||||||| || ||||||||   ||||||||| || |    
T  30319 tttctgaacaggtattttccggaggatgtccgaggtaagaaggagattgaatttctggaattgaagcagggagacatgtctgtgactgagtatgcagcta 30220  T
Q  358 aatttgtggagcttgcaaagttctaccc 385  Q
    | |||| |||||||||||| || |||||    
T  30219 agtttgcggagcttgcaaaattttaccc 30192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0041 (Bit Score: 60; Significance: 2e-25; HSPs: 1)
Name: scaffold0041
Description:

Target: scaffold0041; HSP #1
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 282 - 409
Target Start/End: Complemental strand, 42504 - 42377
Alignment:
Q  282 gatgtccgaggtaggaaggagatcgaatttctggagttgaagcagggtgatatgtctgttgttgagtatgctgcaaaatttgtggagcttgcaaagttct 381  Q
    |||||| |||||| ||||||||| ||||||||||||||||| |||||||| ||||||||    |||||||||||||| |||||||||||||| |  ||||    
T  42504 gatgtcagaggtaagaaggagattgaatttctggagttgaaacagggtgacatgtctgtcacagagtatgctgcaaagtttgtggagcttgccacattct 42405  T
Q  382 acccccattatgctccggagacagctga 409  Q
    |||| ||||||  | |||||||||||||    
T  42404 accctcattatagtgcggagacagctga 42377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1032 (Bit Score: 59; Significance: 7e-25; HSPs: 1)
Name: scaffold1032
Description:

Target: scaffold1032; HSP #1
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 255 - 409
Target Start/End: Original strand, 323 - 477
Alignment:
Q  255 gaatttctgaacaggtacttcccggaagatgtccgaggtaggaaggagatcgaatttctggagttgaagcagggtgatatgtctgttgttgagtatgctg 354  Q
    ||||| ||||| |||||||| ||||| ||||||||||||| ||| || || |||||||||||| |||| ||||| |||||||| |||   || |||||||    
T  323 gaattcctgaataggtactttccggaggatgtccgaggtaagaaagaaattgaatttctggagctgaaacagggggatatgtcagttacagaatatgctg 422  T
Q  355 caaaatttgtggagcttgcaaagttctacccccattatgctccggagacagctga 409  Q
    | || |||||||| |||||||||||||| || || ||| || |||||||||||||    
T  423 ctaagtttgtggaacttgcaaagttctagcctcactatactgcggagacagctga 477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0076 (Bit Score: 59; Significance: 7e-25; HSPs: 1)
Name: scaffold0076
Description:

Target: scaffold0076; HSP #1
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 267 - 409
Target Start/End: Original strand, 52943 - 53085
Alignment:
Q  267 aggtacttcccggaagatgtccgaggtaggaaggagatcgaatttctggagttgaagcagggtgatatgtctgttgttgagtatgctgcaaaatttgtgg 366  Q
    |||||||||||||||||||||||||| |  || |||||||| ||||||||| ||||||||||||| |||| |||    |  ||||||||||| |||||||    
T  52943 aggtacttcccggaagatgtccgaggaaataaagagatcgagtttctggagctgaagcagggtgacatgtttgtcacagcatatgctgcaaagtttgtgg 53042  T
Q  367 agcttgcaaagttctacccccattatgctccggagacagctga 409  Q
    | |||||||||||||||||||| ||  |  |||||||||||||    
T  53043 aacttgcaaagttctacccccactacaccgcggagacagctga 53085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1299 (Bit Score: 58; Significance: 3e-24; HSPs: 1)
Name: scaffold1299
Description:

Target: scaffold1299; HSP #1
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 255 - 412
Target Start/End: Original strand, 1356 - 1513
Alignment:
Q  255 gaatttctgaacaggtacttcccggaagatgtccgaggtaggaaggagatcgaatttctggagttgaagcagggtgatatgtctgttgttgagtatgctg 354  Q
    ||||| ||||| ||||| || |||||||||||| | |||| |||||||||||| |||||||||||||| || ||||| ||||||||    ||||||||||    
T  1356 gaattcctgaataggtattttccggaagatgtctgtggtaagaaggagatcgagtttctggagttgaaacaaggtgacatgtctgtcacagagtatgctg 1455  T
Q  355 caaaatttgtggagcttgcaaagttctacccccattatgctccggagacagctgaatt 412  Q
    |||| || ||||| || || ||||||||||| || ||| || || |||||||||||||    
T  1456 caaagttcgtggaactagctaagttctaccctcactatactgcgaagacagctgaatt 1513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0679 (Bit Score: 58; Significance: 3e-24; HSPs: 1)
Name: scaffold0679
Description:

Target: scaffold0679; HSP #1
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 258 - 379
Target Start/End: Original strand, 546 - 667
Alignment:
Q  258 tttctgaacaggtacttcccggaagatgtccgaggtaggaaggagatcgaatttctggagttgaagcagggtgatatgtctgttgttgagtatgctgcaa 357  Q
    |||||||  |||||||||||||||||||||||||||| ||| || || |||||||||||| |||| |||||||||||||| ||    || ||||||||||    
T  546 tttctgagtaggtacttcccggaagatgtccgaggtaagaaagaaatagaatttctggagctgaaacagggtgatatgtcagtaacagaatatgctgcaa 645  T
Q  358 aatttgtggagcttgcaaagtt 379  Q
    | |||||||||||||| |||||    
T  646 agtttgtggagcttgctaagtt 667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0261 (Bit Score: 58; Significance: 3e-24; HSPs: 2)
Name: scaffold0261
Description:

Target: scaffold0261; HSP #1
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 255 - 404
Target Start/End: Original strand, 11922 - 12071
Alignment:
Q  255 gaatttctgaacaggtacttcccggaagatgtccgaggtaggaaggagatcgaatttctggagttgaagcagggtgatatgtctgttgttgagtatgctg 354  Q
    ||||| ||||| ||||| || |||||||||||| |||| | ||||||||| |||||||| ||| |||| || || |||||||| ||| | ||||||||||    
T  11922 gaattcctgaataggtattttccggaagatgtctgaggaaagaaggagattgaatttctagagctgaaacaaggggatatgtcagttatagagtatgctg 12021  T
Q  355 caaaatttgtggagcttgcaaagttctacccccattatgctccggagaca 404  Q
    | || ||||| |||||||| ||||||||||| |||||| || ||||||||    
T  12022 ctaagtttgtagagcttgctaagttctaccctcattatactgcggagaca 12071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0261; HSP #2
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 255 - 404
Target Start/End: Original strand, 20102 - 20251
Alignment:
Q  255 gaatttctgaacaggtacttcccggaagatgtccgaggtaggaaggagatcgaatttctggagttgaagcagggtgatatgtctgttgttgagtatgctg 354  Q
    ||||| ||||| ||||| || |||||||||||| |||| | ||||||||| |||||||| ||| |||| || || |||||||| ||| | ||||||||||    
T  20102 gaattcctgaataggtattttccggaagatgtctgaggaaagaaggagattgaatttctagagctgaaacaaggggatatgtcagttatagagtatgctg 20201  T
Q  355 caaaatttgtggagcttgcaaagttctacccccattatgctccggagaca 404  Q
    | || ||||| |||||||| ||||||||||| |||||| || ||||||||    
T  20202 ctaagtttgtagagcttgctaagttctaccctcattatactgcggagaca 20251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0190 (Bit Score: 57; Significance: 1e-23; HSPs: 1)
Name: scaffold0190
Description:

Target: scaffold0190; HSP #1
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 267 - 391
Target Start/End: Original strand, 21815 - 21939
Alignment:
Q  267 aggtacttcccggaagatgtccgaggtaggaaggagatcgaatttctggagttgaagcagggtgatatgtctgttgttgagtatgctgcaaaatttgtgg 366  Q
    |||||||||||||||||||||||||||| ||| || || ||||||||||| ||||| |||||||||||||| |||   ||||||||| | || || ||||    
T  21815 aggtacttcccggaagatgtccgaggtaagaacgaaattgaatttctggaattgaaacagggtgatatgtccgttacggagtatgctactaagttcgtgg 21914  T
Q  367 agcttgcaaagttctacccccatta 391  Q
    | ||||| ||||||||||| |||||    
T  21915 aacttgctaagttctaccctcatta 21939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0098 (Bit Score: 57; Significance: 1e-23; HSPs: 1)
Name: scaffold0098
Description:

Target: scaffold0098; HSP #1
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 267 - 379
Target Start/End: Complemental strand, 26244 - 26132
Alignment:
Q  267 aggtacttcccggaagatgtccgaggtaggaaggagatcgaatttctggagttgaagcagggtgatatgtctgttgttgagtatgctgcaaaatttgtgg 366  Q
    |||||||||||||||||||||||||||| |||||| || || |||||||||||||| |||||||||||||| ||     | ||||||||||| |||||||    
T  26244 aggtacttcccggaagatgtccgaggtaagaaggaaattgactttctggagttgaaacagggtgatatgtcagtaacaaaatatgctgcaaagtttgtgg 26145  T
Q  367 agcttgcaaagtt 379  Q
    ||||||| |||||    
T  26144 agcttgctaagtt 26132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026 (Bit Score: 56; Significance: 5e-23; HSPs: 1)
Name: scaffold0026
Description:

Target: scaffold0026; HSP #1
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 255 - 409
Target Start/End: Complemental strand, 52448 - 52293
Alignment:
Q  255 gaatttctgaacaggtacttc-ccggaagatgtccgaggtaggaaggagatcgaatttctggagttgaagcagggtgatatgtctgttgttgagtatgct 353  Q
    ||||||||||||||||| ||  ||||| ||||||||||||| ||| ||||| || |||||||||||||| ||||| |||||||||||   |||||||||     
T  52448 gaatttctgaacaggtatttttccggaggatgtccgaggtaagaaagagattgagtttctggagttgaaacagggggatatgtctgtgactgagtatgca 52349  T
Q  354 gcaaaatttgtggagcttgcaaagttctacccccattatgctccggagacagctga 409  Q
    || || ||||||||||||||||| || || || || ||| || ||||||| |||||    
T  52348 gctaagtttgtggagcttgcaaaattttatccacactatactgcggagactgctga 52293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold2062 (Bit Score: 55; Significance: 2e-22; HSPs: 1)
Name: scaffold2062
Description:

Target: scaffold2062; HSP #1
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 255 - 409
Target Start/End: Original strand, 380 - 534
Alignment:
Q  255 gaatttctgaacaggtacttcccggaagatgtccgaggtaggaaggagatcgaatttctggagttgaagcagggtgatatgtctgttgttgagtatgctg 354  Q
    ||||| ||||| |||||||| ||| | ||||||||||||| ||| || || |||||| ||||| |||||||||| ||||||| | ||   ||||||||||    
T  380 gaattcctgaataggtactttccgaaggatgtccgaggtaagaaagaaattgaatttttggagctgaagcagggggatatgtgttttacagagtatgctg 479  T
Q  355 caaaatttgtggagcttgcaaagttctacccccattatgctccggagacagctga 409  Q
    |||| || ||||| ||||| ||||||||||| || ||| || |||||||||||||    
T  480 caaagttcgtggaacttgctaagttctacccacactatactgcggagacagctga 534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009 (Bit Score: 55; Significance: 2e-22; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 267 - 409
Target Start/End: Complemental strand, 252403 - 252261
Alignment:
Q  267 aggtacttcccggaagatgtccgaggtaggaaggagatcgaatttctggagttgaagcagggtgatatgtctgttgttgagtatgctgcaaaatttgtgg 366  Q
    |||||||||||||||||||||||||||| |||||| || || ||||| || ||||| |||||||||||||| ||    ||||||||||| || || ||||    
T  252403 aggtacttcccggaagatgtccgaggtaagaaggaaattgagtttctagatttgaaacagggtgatatgtccgtcacggagtatgctgctaagttcgtgg 252304  T
Q  367 agcttgcaaagttctacccccattatgctccggagacagctga 409  Q
    | ||||| |||||||||| ||||||   | |||||||||||||    
T  252303 aacttgctaagttctacctccattacagtgcggagacagctga 252261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0367 (Bit Score: 54; Significance: 7e-22; HSPs: 1)
Name: scaffold0367
Description:

Target: scaffold0367; HSP #1
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 267 - 388
Target Start/End: Original strand, 8541 - 8662
Alignment:
Q  267 aggtacttcccggaagatgtccgaggtaggaaggagatcgaatttctggagttgaagcagggtgatatgtctgttgttgagtatgctgcaaaatttgtgg 366  Q
    |||||||||||||| ||||||||||| | |||||| || || | ||| ||| ||||||||| |||||||||||||   || |||||||| || |||||||    
T  8541 aggtacttcccggaggatgtccgaggaaagaaggaaattgagtatctagagctgaagcaggatgatatgtctgttacagaatatgctgctaagtttgtgg 8640  T
Q  367 agcttgcaaagttctaccccca 388  Q
    | ||||||||||||||||||||    
T  8641 aacttgcaaagttctaccccca 8662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0476 (Bit Score: 53; Significance: 3e-21; HSPs: 1)
Name: scaffold0476
Description:

Target: scaffold0476; HSP #1
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 264 - 412
Target Start/End: Original strand, 62 - 210
Alignment:
Q  264 aacaggtacttcccggaagatgtccgaggtaggaaggagatcgaatttctggagttgaagcagggtgatatgtctgttgttgagtatgctgcaaaatttg 363  Q
    |||||||| || || ||||||||||| ||||||||||| ||||| |||||||||||||| || ||||| ||||| ||    |||||||||||||| || |    
T  62 aacaggtattttccagaagatgtccgtggtaggaaggaaatcgagtttctggagttgaaacaaggtgacatgtccgtcacagagtatgctgcaaagttcg 161  T
Q  364 tggagcttgcaaagttctacccccattatgctccggagacagctgaatt 412  Q
    | || || || ||||||||||| || ||| || ||||||||||||||||    
T  162 tagaactagctaagttctaccctcactatactgcggagacagctgaatt 210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0068 (Bit Score: 53; Significance: 3e-21; HSPs: 1)
Name: scaffold0068
Description:

Target: scaffold0068; HSP #1
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 255 - 391
Target Start/End: Original strand, 66616 - 66752
Alignment:
Q  255 gaatttctgaacaggtacttcccggaagatgtccgaggtaggaaggagatcgaatttctggagttgaagcagggtgatatgtctgttgttgagtatgctg 354  Q
    |||||| ||| |||||| || ||||| ||||||||||||| ||| || || ||||||||||||||||| |||||||||||||| |||   ||||||||||    
T  66616 gaatttatgagcaggtattttccggaggatgtccgaggtaagaaagaaattgaatttctggagttgaaacagggtgatatgtccgttacggagtatgctg 66715  T
Q  355 caaaatttgtggagcttgcaaagttctacccccatta 391  Q
    | || || ||||| ||||| ||||| ||||| |||||    
T  66716 ctaagttcgtggaacttgctaagttataccctcatta 66752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0058 (Bit Score: 53; Significance: 3e-21; HSPs: 2)
Name: scaffold0058
Description:

Target: scaffold0058; HSP #1
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 276 - 412
Target Start/End: Complemental strand, 22897 - 22761
Alignment:
Q  276 ccggaagatgtccgaggtaggaaggagatcgaatttctggagttgaagcagggtgatatgtctgttgttgagtatgctgcaaaatttgtggagcttgcaa 375  Q
    ||||||||||||||||||| ||| ||||| || ||||| ||| ||||||||||||| |||||| ||   |||||||||||||| || ||  | ||||| |    
T  22897 ccggaagatgtccgaggtaagaaagagattgagtttctagagctgaagcagggtgacatgtcttttacagagtatgctgcaaagttagtaaaacttgcta 22798  T
Q  376 agttctacccccattatgctccggagacagctgaatt 412  Q
    |||||||||| |||||| ||  |||||||||||||||    
T  22797 agttctaccctcattatactggggagacagctgaatt 22761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0058; HSP #2
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 267 - 340
Target Start/End: Complemental strand, 16205 - 16132
Alignment:
Q  267 aggtacttcccggaagatgtccgaggtaggaaggagatcgaatttctggagttgaagcagggtgatatgtctgt 340  Q
    ||||| || |||||||||||||| || | |||||| ||||||||||| |||||||| || ||||| ||||||||    
T  16205 aggtattttccggaagatgtccgtggcaagaaggaaatcgaatttctagagttgaaacaaggtgacatgtctgt 16132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0751 (Bit Score: 52; Significance: 1e-20; HSPs: 1)
Name: scaffold0751
Description:

Target: scaffold0751; HSP #1
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 255 - 382
Target Start/End: Complemental strand, 5976 - 5849
Alignment:
Q  255 gaatttctgaacaggtacttcccggaagatgtccgaggtaggaaggagatcgaatttctggagttgaagcagggtgatatgtctgttgttgagtatgctg 354  Q
    |||||||||||||||||||| ||||| |||||||| |||| ||| ||||| ||||||||||||||||| |||||  | ||||| ||   ||| ||||| |    
T  5976 gaatttctgaacaggtactttccggaggatgtccggggtaagaaagagattgaatttctggagttgaaacaggggaacatgtcggtaactgaatatgcag 5877  T
Q  355 caaaatttgtggagcttgcaaagttcta 382  Q
    | || ||||||||||||||||| |||||    
T  5876 ctaagtttgtggagcttgcaaaattcta 5849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0706 (Bit Score: 52; Significance: 1e-20; HSPs: 1)
Name: scaffold0706
Description:

Target: scaffold0706; HSP #1
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 255 - 409
Target Start/End: Original strand, 4716 - 4871
Alignment:
Q  255 gaatttctgaacaggtacttcccggaagatgtccgaggtaggaaggagatcgaa-tttctggagttgaagcagggtgatatgtctgttgttgagtatgct 353  Q
    ||||| ||||| ||||| |||| ||| ||||||||||| | |||||| || ||| |||||||||||||| |||||||| |||||| |    || ||||||    
T  4716 gaattcctgaataggtaattcctggaggatgtccgaggaaagaaggaaattgaagtttctggagttgaaacagggtgacatgtctatcacagaatatgct 4815  T
Q  354 gcaaaatttgtggagcttgcaaagttctacccccattatgctccggagacagctga 409  Q
       || |||||||| |||||||||||||||||||||||| || |||||||||||||    
T  4816 tttaagtttgtggaacttgcaaagttctacccccattatactgcggagacagctga 4871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0317 (Bit Score: 52; Significance: 1e-20; HSPs: 1)
Name: scaffold0317
Description:

Target: scaffold0317; HSP #1
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 306 - 409
Target Start/End: Complemental strand, 3370 - 3267
Alignment:
Q  306 gaatttctggagttgaagcagggtgatatgtctgttgttgagtatgctgcaaaatttgtggagcttgcaaagttctacccccattatgctccggagacag 405  Q
    |||||||||||| ||||||||||||||||||| |||   || |||||||| || |||||||| |||||||||||||||||||| ||| |  |||||||||    
T  3370 gaatttctggagctgaagcagggtgatatgtcagttacagaatatgctgctaagtttgtggaacttgcaaagttctacccccactataccgcggagacag 3271  T
Q  406 ctga 409  Q
    ||||    
T  3270 ctga 3267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0947 (Bit Score: 51; Significance: 4e-20; HSPs: 1)
Name: scaffold0947
Description:

Target: scaffold0947; HSP #1
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 255 - 409
Target Start/End: Original strand, 1057 - 1211
Alignment:
Q  255 gaatttctgaacaggtacttcccggaagatgtccgaggtaggaaggagatcgaatttctggagttgaagcagggtgatatgtctgttgttgagtatgctg 354  Q
    ||||| ||||| || ||||| ||||| ||||||||||| | ||| || ||  | ||| ||||| |||||||||| ||||||||||||   ||||||||||    
T  1057 gaattcctgaatagatactttccggaggatgtccgaggaaagaaagaaattaagtttttggagctgaagcagggggatatgtctgttacagagtatgctg 1156  T
Q  355 caaaatttgtggagcttgcaaagttctacccccattatgctccggagacagctga 409  Q
    |||| |||||||| ||||| ||||||||||| |||||| |  |||||||| ||||    
T  1157 caaagtttgtggaacttgctaagttctaccctcattataccgcggagacaactga 1211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0865 (Bit Score: 51; Significance: 4e-20; HSPs: 1)
Name: scaffold0865
Description:

Target: scaffold0865; HSP #1
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 258 - 376
Target Start/End: Original strand, 783 - 901
Alignment:
Q  258 tttctgaacaggtacttcccggaagatgtccgaggtaggaaggagatcgaatttctggagttgaagcagggtgatatgtctgttgttgagtatgctgcaa 357  Q
    |||||||||||||| || ||||| ||||||||||||| ||| ||||| |||||| |||||||||| ||||| || ||||||||  |||| ||||| || |    
T  783 tttctgaacaggtattttccggaggatgtccgaggtaagaaagagattgaatttatggagttgaaacagggagacatgtctgtgattgaatatgcagcta 882  T
Q  358 aatttgtggagcttgcaaa 376  Q
    | ||||| |||||||||||    
T  883 agtttgtagagcttgcaaa 901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0133 (Bit Score: 51; Significance: 4e-20; HSPs: 1)
Name: scaffold0133
Description:

Target: scaffold0133; HSP #1
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 258 - 376
Target Start/End: Original strand, 27796 - 27914
Alignment:
Q  258 tttctgaacaggtacttcccggaagatgtccgaggtaggaaggagatcgaatttctggagttgaagcagggtgatatgtctgttgttgagtatgctgcaa 357  Q
    |||||||||||||| || ||||| ||||||||||||| ||| ||||| |||||| |||||||||| ||||| || ||||||||  |||| ||||| || |    
T  27796 tttctgaacaggtattttccggaggatgtccgaggtaagaaagagattgaatttatggagttgaaacagggagacatgtctgtgattgaatatgcagcta 27895  T
Q  358 aatttgtggagcttgcaaa 376  Q
    | ||||| |||||||||||    
T  27896 agtttgtagagcttgcaaa 27914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0054 (Bit Score: 51; Significance: 4e-20; HSPs: 1)
Name: scaffold0054
Description:

Target: scaffold0054; HSP #1
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 255 - 409
Target Start/End: Original strand, 63047 - 63201
Alignment:
Q  255 gaatttctgaacaggtacttcccggaagatgtccgaggtaggaaggagatcgaatttctggagttgaagcagggtgatatgtctgttgttgagtatgctg 354  Q
    ||||||||||| ||||| || ||||||||||||||||| | ||| ||||| || |||||||| ||||| || ||||||||||| ||    ||||||||||    
T  63047 gaatttctgaataggtattttccggaagatgtccgaggaaagaaagagattgagtttctggaattgaaacaaggtgatatgtccgtgacggagtatgctg 63146  T
Q  355 caaaatttgtggagcttgcaaagttctacccccattatgctccggagacagctga 409  Q
    | || ||||| || || || |||||||| || |||||| || |||||||||||||    
T  63147 cgaagtttgtagaactcgctaagttctatcctcattatactgcggagacagctga 63201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0046 (Bit Score: 51; Significance: 4e-20; HSPs: 2)
Name: scaffold0046
Description:

Target: scaffold0046; HSP #1
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 255 - 409
Target Start/End: Complemental strand, 70904 - 70750
Alignment:
Q  255 gaatttctgaacaggtacttcccggaagatgtccgaggtaggaaggagatcgaatttctggagttgaagcagggtgatatgtctgttgttgagtatgctg 354  Q
    ||||| ||||||||||| || ||||| |||||| |||||| |||||| ||||| ||||| || ||||| || ||||||||||| ||   |||||||| ||    
T  70904 gaattcctgaacaggtattttccggaggatgtctgaggtaagaaggaaatcgagtttcttgaattgaaacaaggtgatatgtcggtaactgagtatgttg 70805  T
Q  355 caaaatttgtggagcttgcaaagttctacccccattatgctccggagacagctga 409  Q
    | || ||||||||||||||||| || || || || ||| || |||||||||||||    
T  70804 ctaagtttgtggagcttgcaaaattttatccacactatactgcggagacagctga 70750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0046; HSP #2
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 264 - 370
Target Start/End: Complemental strand, 716 - 610
Alignment:
Q  264 aacaggtacttcccggaagatgtccgaggtaggaaggagatcgaatttctggagttgaagcagggtgatatgtctgttgttgagtatgctgcaaaatttg 363  Q
    ||||| ||||| ||||||||||| || || | ||| ||||| ||||| |||||||||||||||| ||| ||||| ||  | || ||||||||||| |||     
T  716 aacagatactttccggaagatgttcgcgggaagaaagagattgaattcctggagttgaagcaggatgacatgtcagtgttcgactatgctgcaaagttta 617  T
Q  364 tggagct 370  Q
    |||||||    
T  616 tggagct 610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0017 (Bit Score: 51; Significance: 4e-20; HSPs: 1)
Name: scaffold0017
Description:

Target: scaffold0017; HSP #1
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 255 - 409
Target Start/End: Original strand, 3962 - 4116
Alignment:
Q  255 gaatttctgaacaggtacttcccggaagatgtccgaggtaggaaggagatcgaatttctggagttgaagcagggtgatatgtctgttgttgagtatgctg 354  Q
    ||||| ||||| || || || ||||| ||||| ||||||| ||| ||||| |||||||||||| |||| ||||| |||||||| |||   || |||||||    
T  3962 gaattcctgaatagatattttccggaggatgttcgaggtaagaaagagattgaatttctggagctgaaacagggggatatgtcagttacagaatatgctg 4061  T
Q  355 caaaatttgtggagcttgcaaagttctacccccattatgctccggagacagctga 409  Q
    | |  |||||||| ||||| ||||||||||| |||||| || |||||||||||||    
T  4062 ctaggtttgtggaacttgctaagttctaccctcattatactgcggagacagctga 4116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023 (Bit Score: 50; Significance: 2e-19; HSPs: 1)
Name: scaffold0023
Description:

Target: scaffold0023; HSP #1
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 255 - 388
Target Start/End: Original strand, 163909 - 164042
Alignment:
Q  255 gaatttctgaacaggtacttcccggaagatgtccgaggtaggaaggagatcgaatttctggagttgaagcagggtgatatgtctgttgttgagtatgctg 354  Q
    |||||||| ||||| || |||||| | ||||||||||| | ||||||||| |||||| | ||| ||||||||||||| |||| |||    ||||||||||    
T  163909 gaatttctaaacagttagttcccgaaggatgtccgaggaaagaaggagattgaattttttgagctgaagcagggtgacatgtttgtcacagagtatgctg 164008  T
Q  355 caaaatttgtggagcttgcaaagttctaccccca 388  Q
    | || |||||||| ||||||| ||||||||||||    
T  164009 ctaagtttgtggaacttgcaaggttctaccccca 164042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0335 (Bit Score: 49; Significance: 7e-19; HSPs: 1)
Name: scaffold0335
Description:

Target: scaffold0335; HSP #1
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 262 - 382
Target Start/End: Original strand, 3819 - 3939
Alignment:
Q  262 tgaacaggtacttcccggaagatgtccgaggtaggaaggagatcgaatttctggagttgaagcagggtgatatgtctgttgttgagtatgctgcaaaatt 361  Q
    |||||||||| || ||||| ||||||||||||| |||||| ||||| ||||| ||  |||| || ||||||||||| ||   ||||||||| ||||| ||    
T  3819 tgaacaggtattttccggaggatgtccgaggtaagaaggaaatcgagtttcttgaactgaaacatggtgatatgtcggtgactgagtatgcagcaaagtt 3918  T
Q  362 tgtggagcttgcaaagttcta 382  Q
    ||||||||||||||| |||||    
T  3919 tgtggagcttgcaaaattcta 3939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0310 (Bit Score: 48; Significance: 3e-18; HSPs: 1)
Name: scaffold0310
Description:

Target: scaffold0310; HSP #1
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 258 - 409
Target Start/End: Complemental strand, 11770 - 11619
Alignment:
Q  258 tttctgaacaggtacttcccggaagatgtccgaggtaggaaggagatcgaatttctggagttgaagcagggtgatatgtctgttgttgagtatgctgcaa 357  Q
    ||||||| |||||| |||||| | ||||||||||||| |||||| || || |||||||| ||||| | ||||||| |||| |||   ||||||||||| |    
T  11770 tttctgagcaggtatttcccgtaggatgtccgaggtaagaaggaaattgagtttctggaattgaaactgggtgatttgtccgttacggagtatgctgcta 11671  T
Q  358 aatttgtggagcttgcaaagttctacccccattatgctccggagacagctga 409  Q
    | || ||||| ||||| ||||||||||| |||||   | |||||||||||||    
T  11670 agttcgtggaacttgctaagttctaccctcattacagtgcggagacagctga 11619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0276 (Bit Score: 48; Significance: 3e-18; HSPs: 1)
Name: scaffold0276
Description:

Target: scaffold0276; HSP #1
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 282 - 409
Target Start/End: Original strand, 23458 - 23585
Alignment:
Q  282 gatgtccgaggtaggaaggagatcgaatttctggagttgaagcagggtgatatgtctgttgttgagtatgctgcaaaatttgtggagcttgcaaagttct 381  Q
    |||||| |||||| ||| ||||| ||||||||||| ||||| |||||||| ||||||||    |||||||||||||| |||||||||||||| |  ||||    
T  23458 gatgtcagaggtaagaaagagattgaatttctggaattgaaacagggtgacatgtctgtcacagagtatgctgcaaagtttgtggagcttgccacattct 23557  T
Q  382 acccccattatgctccggagacagctga 409  Q
    |||| ||||||  | ||||||| |||||    
T  23558 accctcattatagtgcggagaccgctga 23585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0156 (Bit Score: 48; Significance: 3e-18; HSPs: 1)
Name: scaffold0156
Description:

Target: scaffold0156; HSP #1
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 262 - 409
Target Start/End: Complemental strand, 37728 - 37581
Alignment:
Q  262 tgaacaggtacttcccggaagatgtccgaggtaggaaggagatcgaatttctggagttgaagcagggtgatatgtctgttgttgagtatgctgcaaaatt 361  Q
    |||| ||| |||| ||||| ||||||||||||| ||| ||||| |||||||||||| |||| || || |||||||  |||   || |||||||  || ||    
T  37728 tgaataggcactttccggaggatgtccgaggtaagaaagagattgaatttctggagctgaaacaaggggatatgttagttacagaatatgctgttaattt 37629  T
Q  362 tgtggagcttgcaaagttctacccccattatgctccggagacagctga 409  Q
    |||||| ||||||||||||||||| || ||| || |||||||||||||    
T  37628 tgtggaacttgcaaagttctaccctcactatactgcggagacagctga 37581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0053 (Bit Score: 48; Significance: 3e-18; HSPs: 2)
Name: scaffold0053
Description:

Target: scaffold0053; HSP #1
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 255 - 382
Target Start/End: Original strand, 62280 - 62407
Alignment:
Q  255 gaatttctgaacaggtacttcccggaagatgtccgaggtaggaaggagatcgaatttctggagttgaagcagggtgatatgtctgttgttgagtatgctg 354  Q
    ||||||||||| |||||||| ||||| |||||||||||||  || ||||| ||||||||| ||||||| ||||| || ||||| ||   ||| ||||| |    
T  62280 gaatttctgaataggtactttccggaggatgtccgaggtaaaaaagagattgaatttctgaagttgaaacagggggacatgtcggtgactgaatatgcag 62379  T
Q  355 caaaatttgtggagcttgcaaagttcta 382  Q
    | || ||||||||||||||||| |||||    
T  62380 ctaagtttgtggagcttgcaaaattcta 62407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0053; HSP #2
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 255 - 409
Target Start/End: Original strand, 64830 - 64984
Alignment:
Q  255 gaatttctgaacaggtacttcccggaagatgtccgaggtaggaaggagatcgaatttctggagttgaagcagggtgatatgtctgttgttgagtatgctg 354  Q
    ||||||||||| ||||| ||||| ||||||||||| || || || ||||| ||||||||||| ||||| |||||||| ||||||||    ||||||| ||    
T  64830 gaatttctgaataggtatttcccagaagatgtccgtggaagaaaagagattgaatttctggaattgaaacagggtgacatgtctgtcacagagtatgatg 64929  T
Q  355 caaaatttgtggagcttgcaaagttctacccccattatgctccggagacagctga 409  Q
      || |||||||| || || ||||| || || || ||| || |||||||||||||    
T  64930 tgaagtttgtggaactcgccaagttttatcctcactatactgcggagacagctga 64984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0104 (Bit Score: 47; Significance: 1e-17; HSPs: 1)
Name: scaffold0104
Description:

Target: scaffold0104; HSP #1
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 255 - 409
Target Start/End: Original strand, 42927 - 43081
Alignment:
Q  255 gaatttctgaacaggtacttcccggaagatgtccgaggtaggaaggagatcgaatttctggagttgaagcagggtgatatgtctgttgttgagtatgctg 354  Q
    ||||||||||||| |||||| ||||| |||||| |||||| ||| ||||| || |||||||||||||| ||||| || ||||| ||   ||| ||||| |    
T  42927 gaatttctgaacaagtactttccggaggatgtctgaggtaagaaagagattgagtttctggagttgaaacagggggacatgtcggtgactgaatatgcag 43026  T
Q  355 caaaatttgtggagcttgcaaagttctacccccattatgctccggagacagctga 409  Q
    | || ||||| ||||||||||| ||||| || || ||| || |||||||| ||||    
T  43027 ctaagtttgtagagcttgcaaaattctatccacactatactgcggagacaactga 43081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0056 (Bit Score: 47; Significance: 1e-17; HSPs: 1)
Name: scaffold0056
Description:

Target: scaffold0056; HSP #1
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 255 - 409
Target Start/End: Original strand, 391 - 545
Alignment:
Q  255 gaatttctgaacaggtacttcccggaagatgtccgaggtaggaaggagatcgaatttctggagttgaagcagggtgatatgtctgttgttgagtatgctg 354  Q
    ||||| |||||  |||| || |||||||||||| |||| | ||||||||| |||||||||||| |||| ||||| |||||||  |||   || |||||||    
T  391 gaattcctgaattggtattttccggaagatgtcagaggaaagaaggagattgaatttctggagctgaaacagggggatatgttagttacagaatatgctg 490  T
Q  355 caaaatttgtggagcttgcaaagttctacccccattatgctccggagacagctga 409  Q
    | || |||||||| ||||  ||||||||||  |||||| || |||||||||||||    
T  491 ctaagtttgtggaacttgttaagttctaccgtcattatactgcggagacagctga 545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0848 (Bit Score: 46; Significance: 4e-17; HSPs: 1)
Name: scaffold0848
Description:

Target: scaffold0848; HSP #1
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 258 - 379
Target Start/End: Original strand, 4522 - 4643
Alignment:
Q  258 tttctgaacaggtacttcccggaagatgtccgaggtaggaaggagatcgaatttctggagttgaagcagggtgatatgtctgttgttgagtatgctgcaa 357  Q
    ||||||||||| || |||||||| ||||||||||||| ||| || || |||||||| ||| |||||||||| |||||||| ||    || ||||||||||    
T  4522 tttctgaacagatatttcccggaggatgtccgaggtaagaaagaaatagaatttctagagctgaagcagggagatatgtcagtaacagaatatgctgcaa 4621  T
Q  358 aatttgtggagcttgcaaagtt 379  Q
    | ||| |||||||||| |||||    
T  4622 agtttatggagcttgctaagtt 4643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0585 (Bit Score: 45; Significance: 2e-16; HSPs: 1)
Name: scaffold0585
Description:

Target: scaffold0585; HSP #1
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 264 - 392
Target Start/End: Original strand, 378 - 506
Alignment:
Q  264 aacaggtacttcccggaagatgtccgaggtaggaaggagatcgaatttctggagttgaagcagggtgatatgtctgttgttgagtatgctgcaaaatttg 363  Q
    ||||||||||| || |||||||||||||  | ||| || || |||||||| |||||||||||||| |||||||||||   ||| ||||||   || ||||    
T  378 aacaggtactttccagaagatgtccgagaaatgaaagaaattgaatttctagagttgaagcagggagatatgtctgtaactgaatatgcttataagtttg 477  T
Q  364 tggagcttgcaaagttctacccccattat 392  Q
    ||||||||||||| || ||||| ||||||    
T  478 tggagcttgcaaaattttacccacattat 506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1530 (Bit Score: 44; Significance: 7e-16; HSPs: 1)
Name: scaffold1530
Description:

Target: scaffold1530; HSP #1
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 255 - 382
Target Start/End: Complemental strand, 1301 - 1174
Alignment:
Q  255 gaatttctgaacaggtacttcccggaagatgtccgaggtaggaaggagatcgaatttctggagttgaagcagggtgatatgtctgttgttgagtatgctg 354  Q
    ||||| ||||| |||||||||||||| || ||| |||| | ||| ||||| |||||||||||| ||||||||||||||||||| | |   || ||||||     
T  1301 gaattcctgaataggtacttcccggaggacgtctgaggaaagaaagagattgaatttctggagctgaagcagggtgatatgtcagctacagaatatgcta 1202  T
Q  355 caaaatttgtggagcttgcaaagttcta 382  Q
    | || |||||||| || |||||||||||    
T  1201 ctaagtttgtggaactggcaaagttcta 1174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0490 (Bit Score: 44; Significance: 7e-16; HSPs: 1)
Name: scaffold0490
Description:

Target: scaffold0490; HSP #1
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 255 - 382
Target Start/End: Complemental strand, 3661 - 3534
Alignment:
Q  255 gaatttctgaacaggtacttcccggaagatgtccgaggtaggaaggagatcgaatttctggagttgaagcagggtgatatgtctgttgttgagtatgctg 354  Q
    ||||| ||||| |||||||| ||||| ||||||||||||| |||||| || || |||||||| ||||| ||||| || ||||||||    ||||||||||    
T  3661 gaattcctgaataggtactttccggaggatgtccgaggtaagaaggaaattgagtttctggaattgaaacagggggacatgtctgtgacggagtatgctg 3562  T
Q  355 caaaatttgtggagcttgcaaagttcta 382  Q
    | || |||||||| || || ||||||||    
T  3561 cgaagtttgtggaactcgctaagttcta 3534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0035 (Bit Score: 43; Significance: 0.000000000000003; HSPs: 1)
Name: scaffold0035
Description:

Target: scaffold0035; HSP #1
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 311 - 409
Target Start/End: Complemental strand, 6544 - 6446
Alignment:
Q  311 tctggagttgaagcagggtgatatgtctgttgttgagtatgctgcaaaatttgtggagcttgcaaagttctacccccattatgctccggagacagctga 409  Q
    ||||||| |||||||||| ||||||||||||   |||||||||||||| |||||||| ||||| ||||||||||| || ||| |  | |||||||||||    
T  6544 tctggagctgaagcagggggatatgtctgttacagagtatgctgcaaagtttgtggaacttgctaagttctaccctcactatacctcagagacagctga 6446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1845 (Bit Score: 42; Significance: 0.00000000000001; HSPs: 1)
Name: scaffold1845
Description:

Target: scaffold1845; HSP #1
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 258 - 391
Target Start/End: Original strand, 815 - 948
Alignment:
Q  258 tttctgaacaggtacttcccggaagatgtccgaggtaggaaggagatcgaatttctggagttgaagcagggtgatatgtctgttgttgagtatgctgcaa 357  Q
    ||||||| | |||| || ||||| |||||| |||||| ||| || ||||| ||||| |||||||| |||||||| ||||| ||    |||||| ||||||    
T  815 tttctgagcgggtattttccggaggatgtcagaggtaagaaagaaatcgagtttctagagttgaaacagggtgacatgtccgtcacggagtatactgcaa 914  T
Q  358 aatttgtggagcttgcaaagttctacccccatta 391  Q
    | |||||||| ||||| ||||||||||| |||||    
T  915 agtttgtggaacttgctaagttctaccctcatta 948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1056 (Bit Score: 42; Significance: 0.00000000000001; HSPs: 1)
Name: scaffold1056
Description:

Target: scaffold1056; HSP #1
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 255 - 404
Target Start/End: Complemental strand, 2514 - 2366
Alignment:
Q  255 gaatttctgaacaggtacttcccggaagatgtccgaggtaggaaggagatcgaatttctggagttgaagcagggtgatatgtctgttgttgagtatgctg 354  Q
    |||||||||| |||||| || ||| | |||||| |||||| |||||| || || |||||||| |||||||| ||||||||||| ||   ||||||||| |    
T  2514 gaatttctgagcaggtattttccg-aggatgtctgaggtaagaaggaaattgagtttctggacttgaagcaaggtgatatgtcggtaactgagtatgcag 2416  T
Q  355 caaaatttgtggagcttgcaaagttctacccccattatgctccggagaca 404  Q
    | || |||||||||||| |||| ||||| || || ||| || ||||||||    
T  2415 ctaagtttgtggagctttcaaaattctatccacactatactgcggagaca 2366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0102 (Bit Score: 42; Significance: 0.00000000000001; HSPs: 1)
Name: scaffold0102
Description:

Target: scaffold0102; HSP #1
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 267 - 404
Target Start/End: Complemental strand, 43481 - 43345
Alignment:
Q  267 aggtacttcccggaagatgtccgaggtaggaaggagatcgaatttctggagttgaagcagggtgatatgtctgttgttgagtatgctgcaaaatttgtgg 366  Q
    ||||| || ||||| ||||||||||| | ||| ||||| |||||| ||||| |||| ||||| ||||||||||||    ||||||||||  || |||| |    
T  43481 aggtattttccggaggatgtccgaggaaagaaagagattgaatttttggagctgaaacagggggatatgtctgttacaaagtatgctgc-taagttgtag 43383  T
Q  367 agcttgcaaagttctacccccattatgctccggagaca 404  Q
    |||||||||||||||| || |||||| || ||||||||    
T  43382 agcttgcaaagttctatcctcattatactgcggagaca 43345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0031 (Bit Score: 41; Significance: 0.00000000000004; HSPs: 1)
Name: scaffold0031
Description:

Target: scaffold0031; HSP #1
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 277 - 405
Target Start/End: Complemental strand, 116398 - 116270
Alignment:
Q  277 cggaagatgtccgaggtaggaaggagatcgaatttctggagttgaagcagggtgatatgtctgttgttgagtatgctgcaaaatttgtggagcttgcaaa 376  Q
    |||| ||||||||||| | ||| ||||| |||||||||||| |||| ||||| ||||||||| ||    |||||||||| || ||||| || ||||||||    
T  116398 cggaggatgtccgaggaaagaaagagattgaatttctggagctgaaacagggggatatgtctcttacaaagtatgctgccaagtttgtagaacttgcaaa 116299  T
Q  377 gttctacccccattatgctccggagacag 405  Q
    |||||| || ||||||  | |||||||||    
T  116298 gttctatcctcattatagtgcggagacag 116270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0523 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 2)
Name: scaffold0523
Description:

Target: scaffold0523; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 255 - 382
Target Start/End: Complemental strand, 6233 - 6106
Alignment:
Q  255 gaatttctgaacaggtacttcccggaagatgtccgaggtaggaaggagatcgaatttctggagttgaagcagggtgatatgtctgttgttgagtatgctg 354  Q
    ||||||| ||| |||||||| ||||| ||||||||||||| |||||| || || |||||||| ||||| ||||| || ||||||||    ||||||||||    
T  6233 gaatttcggaataggtactttccggaggatgtccgaggtaagaaggaaattgagtttctggaattgaaacagggggacatgtctgtgacggagtatgctg 6134  T
Q  355 caaaatttgtggagcttgcaaagttcta 382  Q
    | |  |||||||| || || ||||||||    
T  6133 cgaggtttgtggaactcgctaagttcta 6106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0523; HSP #2
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 282 - 373
Target Start/End: Original strand, 11278 - 11369
Alignment:
Q  282 gatgtccgaggtaggaaggagatcgaatttctggagttgaagcagggtgatatgtctgttgttgagtatgctgcaaaatttgtggagcttgc 373  Q
    |||||| |||| | ||| ||||| |||||||||||||||||||||||||| ||||| ||    ||||||||||| || |||||||| |||||    
T  11278 gatgtcagaggaaagaaagagattgaatttctggagttgaagcagggtgacatgtccgtcacagagtatgctgctaagtttgtggaacttgc 11369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0457 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 1)
Name: scaffold0457
Description:

Target: scaffold0457; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 282 - 373
Target Start/End: Original strand, 13589 - 13680
Alignment:
Q  282 gatgtccgaggtaggaaggagatcgaatttctggagttgaagcagggtgatatgtctgttgttgagtatgctgcaaaatttgtggagcttgc 373  Q
    |||||| |||| | ||| ||||| || || |||||||||||||||||||| ||||||||    |||||||||||||| ||||||||||||||    
T  13589 gatgtcagaggaaagaaagagattgagttcctggagttgaagcagggtgacatgtctgtcacagagtatgctgcaaagtttgtggagcttgc 13680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0434 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 1)
Name: scaffold0434
Description:

Target: scaffold0434; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 282 - 409
Target Start/End: Original strand, 5437 - 5564
Alignment:
Q  282 gatgtccgaggtaggaaggagatcgaatttctggagttgaagcagggtgatatgtctgttgttgagtatgctgcaaaatttgtggagcttgcaaagttct 381  Q
    ||||||||||| | |||  |||| ||||||||||| ||||| || || |||||||||||    ||||||||||| || ||||| |||||||||||||| |    
T  5437 gatgtccgaggaaagaaatagattgaatttctggaattgaaacaaggggatatgtctgtaacagagtatgctgcgaagtttgtagagcttgcaaagtttt 5536  T
Q  382 acccccattatgctccggagacagctga 409  Q
    | || |||||| || ||||||| |||||    
T  5537 atcctcattatactgcggagaccgctga 5564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0282 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 1)
Name: scaffold0282
Description:

Target: scaffold0282; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 264 - 379
Target Start/End: Original strand, 9639 - 9754
Alignment:
Q  264 aacaggtacttcccggaagatgtccgaggtaggaaggagatcgaatttctggagttgaagcagggtgatatgtctgttgttgagtatgctgcaaaatttg 363  Q
    ||||| ||||| |||||||||||||| || | ||| ||||| ||||| |||||||||||||||||||| ||||| ||    || ||||||||||| |||     
T  9639 aacagatactttccggaagatgtccgcgggaagaaagagattgaattcctggagttgaagcagggtgacatgtcagtgtccgactatgctgcaaagttta 9738  T
Q  364 tggagcttgcaaagtt 379  Q
    ||||||| || |||||    
T  9739 tggagctggctaagtt 9754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0113 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 1)
Name: scaffold0113
Description:

Target: scaffold0113; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 258 - 385
Target Start/End: Complemental strand, 18032 - 17905
Alignment:
Q  258 tttctgaacaggtacttcccggaagatgtccgaggtaggaaggagatcgaatttctggagttgaagcagggtgatatgtctgttgttgagtatgctgcaa 357  Q
    ||||||| || ||| || ||||| |||||| |||||  ||| || || || |||||||||||||| |||||||| ||||| ||    |||||||||||||    
T  18032 tttctgagcaagtattttccggaggatgtcagaggttagaaagaaattgagtttctggagttgaaacagggtgacatgtccgtcacggagtatgctgcaa 17933  T
Q  358 aatttgtggagcttgcaaagttctaccc 385  Q
    | |||||||| ||||| |||||||||||    
T  17932 agtttgtggaacttgctaagttctaccc 17905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0100 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 1)
Name: scaffold0100
Description:

Target: scaffold0100; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 261 - 332
Target Start/End: Original strand, 11425 - 11496
Alignment:
Q  261 ctgaacaggtacttcccggaagatgtccgaggtaggaaggagatcgaatttctggagttgaagcagggtgat 332  Q
    |||||||||| ||| ||||||||||| || || | ||||||||| |||||||| ||||||||||||||||||    
T  11425 ctgaacaggtgctttccggaagatgttcgcgggaagaaggagattgaatttcttgagttgaagcagggtgat 11496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 2)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 264 - 379
Target Start/End: Original strand, 162525 - 162640
Alignment:
Q  264 aacaggtacttcccggaagatgtccgaggtaggaaggagatcgaatttctggagttgaagcagggtgatatgtctgttgttgagtatgctgcaaaatttg 363  Q
    ||||| ||||| || ||||||||||  || | ||||||||| ||||| |||||||||||||||||||||||||| ||    || ||||||||||| |||     
T  162525 aacagatactttccagaagatgtccacgggaagaaggagattgaattcctggagttgaagcagggtgatatgtcagtgtccgactatgctgcaaagttta 162624  T
Q  364 tggagcttgcaaagtt 379  Q
    ||||||| || |||||    
T  162625 tggagctggctaagtt 162640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007; HSP #2
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 270 - 409
Target Start/End: Complemental strand, 49443 - 49304
Alignment:
Q  270 tacttcccggaagatgtccgaggtaggaaggagatcgaatttctggagttgaagcagggtgatatgtctgttgttgagtatgctgcaaaatttgtggagc 369  Q
    ||||| ||||||||||| || || | ||| |||||||| || || ||| ||||||| ||  | ||||||||  || |||||||||| || ||||| |||     
T  49443 tactttccggaagatgttcgcgggaagaaagagatcgagttccttgagctgaagcaaggaaacatgtctgtgatttagtatgctgccaagtttgttgagt 49344  T
Q  370 ttgcaaagttctacccccattatgctccggagacagctga 409  Q
    | |||||||| ||||| ||||||||| | ||||| |||||    
T  49343 tggcaaagttttacccacattatgctgcagagactgctga 49304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0505 (Bit Score: 39; Significance: 0.0000000000006; HSPs: 1)
Name: scaffold0505
Description:

Target: scaffold0505; HSP #1
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 261 - 379
Target Start/End: Complemental strand, 2541 - 2423
Alignment:
Q  261 ctgaacaggtacttcccggaagatgtccgaggtaggaaggagatcgaatttctggagttgaagcagggtgatatgtctgttgttgagtatgctgcaaaat 360  Q
    |||||||| ||||| ||||||||||| ||  | | ||| ||||| || ||||| ||||||||||||||||| ||||| ||  | ||||||||||| || |    
T  2541 ctgaacagatactttccggaagatgttcggaggaagaacgagatagagtttctcgagttgaagcagggtgacatgtcggtgatcgagtatgctgctaagt 2442  T
Q  361 ttgtggagcttgcaaagtt 379  Q
    |||||||||| || |||||    
T  2441 ttgtggagctggctaagtt 2423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0405 (Bit Score: 39; Significance: 0.0000000000006; HSPs: 1)
Name: scaffold0405
Description:

Target: scaffold0405; HSP #1
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 306 - 376
Target Start/End: Complemental strand, 6347 - 6277
Alignment:
Q  306 gaatttctggagttgaagcagggtgatatgtctgttgttgagtatgctgcaaaatttgtggagcttgcaaa 376  Q
    ||||||||| ||||||||||||| |||||||||||   ||||||||| || || |||||||||||||||||    
T  6347 gaatttctgaagttgaagcagggggatatgtctgtgactgagtatgcagctaagtttgtggagcttgcaaa 6277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0029 (Bit Score: 39; Significance: 0.0000000000006; HSPs: 1)
Name: scaffold0029
Description:

Target: scaffold0029; HSP #1
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 255 - 325
Target Start/End: Original strand, 93402 - 93472
Alignment:
Q  255 gaatttctgaacaggtacttcccggaagatgtccgaggtaggaaggagatcgaatttctggagttgaagca 325  Q
    ||||| ||||| || ||||| ||||||||||||||||| | |||||| || ||||||||||||||||||||    
T  93402 gaattcctgaatagatactttccggaagatgtccgagggaagaaggaaatagaatttctggagttgaagca 93472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0180 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0180
Description:

Target: scaffold0180; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 296 - 373
Target Start/End: Original strand, 30577 - 30654
Alignment:
Q  296 gaaggagatcgaatttctggagttgaagcagggtgatatgtctgttgttgagtatgctgcaaaatttgtggagcttgc 373  Q
    |||||||||||| ||||| || ||||| ||||| |||||||| ||   ||||||||||||||| ||||||||||||||    
T  30577 gaaggagatcgagtttcttgaattgaaacagggagatatgtcagtgactgagtatgctgcaaagtttgtggagcttgc 30654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0044 (Bit Score: 36; Significance: 0.00000000004; HSPs: 1)
Name: scaffold0044
Description:

Target: scaffold0044; HSP #1
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 270 - 385
Target Start/End: Complemental strand, 4202 - 4087
Alignment:
Q  270 tacttcccggaagatgtccgaggtaggaaggagatcgaatttctggagttgaagcagggtgatatgtctgttgttgagtatgctgcaaaatttgtggagc 369  Q
    ||||| ||||||||||| || || | |||||||||||| || || ||||||||||| ||  | ||||||||    ||||||||||| || ||||||||||    
T  4202 tactttccggaagatgttcgcgggaagaaggagatcgagttcctcgagttgaagcaaggaaacatgtctgtgacagagtatgctgccaagtttgtggagc 4103  T
Q  370 ttgcaaagttctaccc 385  Q
    |  |||||||||||||    
T  4102 tatcaaagttctaccc 4087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001 (Bit Score: 36; Significance: 0.00000000004; HSPs: 3)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 276 - 371
Target Start/End: Original strand, 167713 - 167808
Alignment:
Q  276 ccggaagatgtccgaggtaggaaggagatcgaatttctggagttgaagcagggtgatatgtctgttgttgagtatgctgcaaaatttgtggagctt 371  Q
    ||||| ||||||||||||| ||| || || |||||||||||| |||||||||| |||||||  ||    |||||||||||||  ||||||||||||    
T  167713 ccggaggatgtccgaggtaagaaagaaatagaatttctggagctgaagcagggagatatgttagtaacggagtatgctgcaaggtttgtggagctt 167808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001; HSP #2
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 265 - 379
Target Start/End: Complemental strand, 442438 - 442324
Alignment:
Q  265 acaggtacttcccggaagatgtccgaggtaggaaggagatcgaatttctggagttgaagcagggtgatatgtctgttgttgagtatgctgcaaaatttgt 364  Q
    |||| ||||| | ||||||||| || || | ||| |||||||| ||||| ||| ||||||||||||||| ||| ||   ||||||||||||||| |||||    
T  442438 acagatactttctggaagatgttcgcgggaagaaagagatcgagtttcttgagctgaagcagggtgataagtcagtgactgagtatgctgcaaagtttgt 442339  T
Q  365 ggagcttgcaaagtt 379  Q
     ||||| || |||||    
T  442338 agagctagctaagtt 442324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001; HSP #3
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 282 - 391
Target Start/End: Original strand, 513888 - 513997
Alignment:
Q  282 gatgtccgaggtaggaaggagatcgaatttctggagttgaagcagggtgatatgtctgttgttgagtatgctgcaaaatttgtggagcttgcaaagttct 381  Q
    |||||| |||||| ||| ||||| || ||||| |||||||| |||||||| ||||| ||    ||||||||||| |  || ||||| ||||| |||||||    
T  513888 gatgtcagaggtaagaaagagattgagtttctagagttgaaacagggtgacatgtccgtcacggagtatgctgctaggttcgtggaacttgctaagttct 513987  T
Q  382 acccccatta 391  Q
    |||| |||||    
T  513988 accctcatta 513997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0671 (Bit Score: 35; Significance: 0.0000000002; HSPs: 1)
Name: scaffold0671
Description:

Target: scaffold0671; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 261 - 379
Target Start/End: Complemental strand, 3739 - 3621
Alignment:
Q  261 ctgaacaggtacttcccggaagatgtccgaggtaggaaggagatcgaatttctggagttgaagcagggtgatatgtctgttgttgagtatgctgcaaaat 360  Q
    |||||||| ||||| ||||||||||| || || | ||| ||||| || ||||| |||  |||||||||| ||||||  ||   ||||||||||||||| |    
T  3739 ctgaacagatactttccggaagatgttcgtgggaagaaagagattgagtttcttgagcggaagcagggtaatatgttagtgactgagtatgctgcaaagt 3640  T
Q  361 ttgtggagcttgcaaagtt 379  Q
    |||||||||| || |||||    
T  3639 ttgtggagctggctaagtt 3621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0266 (Bit Score: 35; Significance: 0.0000000002; HSPs: 1)
Name: scaffold0266
Description:

Target: scaffold0266; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 255 - 409
Target Start/End: Complemental strand, 17433 - 17279
Alignment:
Q  255 gaatttctgaacaggtacttcccggaagatgtccgaggtaggaaggagatcgaatttctggagttgaagcagggtgatatgtctgttgttgagtatgctg 354  Q
    ||||||||||| ||||| || ||||| |||||||||||||  |||||||| || |||||||| ||||| || || || ||||||||    ||||||||||    
T  17433 gaatttctgaataggtattttccggaggatgtccgaggtaaaaaggagattgagtttctggaattgaaacaaggggacatgtctgtgacggagtatgctg 17334  T
Q  355 caaaatttgtggagcttgcaaagttctacccccattatgctccggagacagctga 409  Q
    | |  |||||||| || || ||||| || || || ||| || ||||||| |||||    
T  17333 cgaggtttgtggaactcgctaagttttatcctcactatactgcggagactgctga 17279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1881 (Bit Score: 32; Significance: 0.000000009; HSPs: 1)
Name: scaffold1881
Description:

Target: scaffold1881; HSP #1
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 270 - 409
Target Start/End: Original strand, 3 - 142
Alignment:
Q  270 tacttcccggaagatgtccgaggtaggaaggagatcgaatttctggagttgaagcagggtgatatgtctgttgttgagtatgctgcaaaatttgtggagc 369  Q
    ||||| ||||||||||| || || | ||| |||||||| || || ||| ||||||| ||  | ||||||||    ||||||||||| || |||||||||     
T  3 tactttccggaagatgttcgcgggaagaaagagatcgagttccttgagctgaagcaaggaaacatgtctgtgacagagtatgctgccaagtttgtggagt 102  T
Q  370 ttgcaaagttctacccccattatgctccggagacagctga 409  Q
    | |||||||||||||| || |||||| | ||||| |||||    
T  103 tggcaaagttctacccgcactatgctgctgagactgctga 142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0071 (Bit Score: 32; Significance: 0.000000009; HSPs: 1)
Name: scaffold0071
Description:

Target: scaffold0071; HSP #1
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 258 - 409
Target Start/End: Complemental strand, 3018 - 2867
Alignment:
Q  258 tttctgaacaggtacttcccggaagatgtccgaggtaggaaggagatcgaatttctggagttgaagcagggtgatatgtctgttgttgagtatgctgcaa 357  Q
    ||||| ||||| ||||| ||| ||||||| || || | ||| |||||||| || || ||||||||||| ||  ||||||||||   |||||||||||| |    
T  3018 tttctaaacagatactttccgaaagatgttcgcgggaagaaagagatcgagttccttgagttgaagcaaggaaatatgtctgtgactgagtatgctgcca 2919  T
Q  358 aatttgtggagcttgcaaagttctacccccattatgctccggagacagctga 409  Q
    | ||||||||| | |||| ||| || || |||||| || | ||||| |||||    
T  2918 agtttgtggagttggcaaggttttatccgcattatactgcagagactgctga 2867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0431 (Bit Score: 31; Significance: 0.00000004; HSPs: 1)
Name: scaffold0431
Description:

Target: scaffold0431; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 270 - 392
Target Start/End: Complemental strand, 11145 - 11023
Alignment:
Q  270 tacttcccggaagatgtccgaggtaggaaggagatcgaatttctggagttgaagcagggtgatatgtctgttgttgagtatgctgcaaaatttgtggagc 369  Q
    ||||| ||||||||||| || || | ||||||||| ||||| || ||||||||||| ||  | ||||||||   |||||||||||| || ||||| |||     
T  11145 tactttccggaagatgttcgcgggaagaaggagattgaattccttgagttgaagcaaggaaacatgtctgtgactgagtatgctgccaagtttgtcgagt 11046  T
Q  370 ttgcaaagttctacccccattat 392  Q
    | || ||||| ||||| ||||||    
T  11045 tggcgaagttttacccgcattat 11023  T

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Target: scaffold0151 (Bit Score: 31; Significance: 0.00000004; HSPs: 1)
Name: scaffold0151
Description:

Target: scaffold0151; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 255 - 373
Target Start/End: Original strand, 50 - 168
Alignment:
Q  255 gaatttctgaacaggtacttcccggaagatgtccgaggtaggaaggagatcgaatttctggagttgaagcagggtgatatgtctgttgttgagtatgctg 354  Q
    ||||| ||||| |||||||| ||||| ||||||||||| | | | ||||| |||||||| ||| |||| ||||| |||||||  |||   || |||||||    
T  50 gaattcctgaataggtactttccggaggatgtccgaggaaagtaagagattgaatttctcgagctgaaccagggggatatgttagttacagaatatgctg 149  T
Q  355 caaaatttgtggagcttgc 373  Q
    | || |||||||| |||||    
T  150 ctaagtttgtggaacttgc 168  T

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Target: scaffold0018 (Bit Score: 31; Significance: 0.00000004; HSPs: 1)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 265 - 379
Target Start/End: Original strand, 8868 - 8982
Alignment:
Q  265 acaggtacttcccggaagatgtccgaggtaggaaggagatcgaatttctggagttgaagcagggtgatatgtctgttgttgagtatgctgcaaaatttgt 364  Q
    |||| ||||| ||||||||||| || || | ||| ||||| || ||||| ||| | ||||||||||||| ||| ||   ||| ||||||||||| |||||    
T  8868 acagatactttccggaagatgttcgcggaaagaaagagattgagtttcttgagctaaagcagggtgataagtcggtgactgaatatgctgcaaagtttgt 8967  T
Q  365 ggagcttgcaaagtt 379  Q
    |||||| || |||||    
T  8968 ggagctggctaagtt 8982  T

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Target: scaffold0148 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0148
Description:

Target: scaffold0148; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 255 - 368
Target Start/End: Complemental strand, 2795 - 2682
Alignment:
Q  255 gaatttctgaacaggtacttcccggaagatgtccgaggtaggaaggagatcgaatttctggagttgaagcagggtgatatgtctgttgttgagtatgctg 354  Q
    ||||| ||||| || |||||  |||||||||| || || | |||||||||  ||||||| ||| ||||||| ||||||||||| ||    ||||||||||    
T  2795 gaattcctgaatagatacttttcggaagatgttcgcgggaagaaggagattcaatttctagagctgaagcaaggtgatatgtcggtgacggagtatgctg 2696  T
Q  355 caaaatttgtggag 368  Q
    | || |||||||||    
T  2695 ctaagtttgtggag 2682  T

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Target: scaffold0118 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0118
Description:

Target: scaffold0118; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 282 - 391
Target Start/End: Complemental strand, 1230 - 1121
Alignment:
Q  282 gatgtccgaggtaggaaggagatcgaatttctggagttgaagcagggtgatatgtctgttgttgagtatgctgcaaaatttgtggagcttgcaaagttct 381  Q
    |||||| |||||| ||| ||||| || ||||||||||||||  ||||||| ||||| ||    ||||||||||| |  || ||||| ||||| |||||||    
T  1230 gatgtcagaggtaagaaagagattgagtttctggagttgaaaaagggtgacatgtccgtcacggagtatgctgctaggttcgtggaacttgctaagttct 1131  T
Q  382 acccccatta 391  Q
    |||| |||||    
T  1130 accctcatta 1121  T

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Target: scaffold0019 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0019
Description:

Target: scaffold0019; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 300 - 409
Target Start/End: Complemental strand, 171870 - 171761
Alignment:
Q  300 gagatcgaatttctggagttgaagcagggtgatatgtctgttgttgagtatgctgcaaaatttgtggagcttgcaaagttctacccccattatgctccgg 399  Q
    |||||||| || || ||||||||||| ||  | ||||||||    ||||||||||| || ||||||||| | ||||||||||| || ||||||||| | |    
T  171870 gagatcgagttccttgagttgaagcaagggaacatgtctgtgacagagtatgctgccaagtttgtggagttggcaaagttctatccgcattatgctgctg 171771  T
Q  400 agacagctga 409  Q
    |||| |||||    
T  171770 agactgctga 171761  T

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Target: scaffold0108 (Bit Score: 29; Significance: 0.0000006; HSPs: 1)
Name: scaffold0108
Description:

Target: scaffold0108; HSP #1
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 345 - 409
Target Start/End: Complemental strand, 50811 - 50747
Alignment:
Q  345 gagtatgctgcaaaatttgtggagcttgcaaagttctacccccattatgctccggagacagctga 409  Q
    |||||||| || || ||||| |||||||||||||| || || |||||| || |||||||||||||    
T  50811 gagtatgcagctaagtttgtagagcttgcaaagttttatcctcattatactgcggagacagctga 50747  T

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Target: scaffold0088 (Bit Score: 29; Significance: 0.0000006; HSPs: 1)
Name: scaffold0088
Description:

Target: scaffold0088; HSP #1
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 345 - 409
Target Start/End: Complemental strand, 30616 - 30552
Alignment:
Q  345 gagtatgctgcaaaatttgtggagcttgcaaagttctacccccattatgctccggagacagctga 409  Q
    |||||||||||||| ||||| || ||||| ||||||||||| ||||||  |  ||||||||||||    
T  30616 gagtatgctgcaaagtttgttgaacttgctaagttctaccctcattatagtgtggagacagctga 30552  T

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