View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: Tnk444-LTR4-TNT-insertion-10 (Length: 324)

Name: Tnk444-LTR4-TNT-insertion-10
Description: Tnk444-LTR4
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] Tnk444-LTR4-TNT-insertion-10
Tnk444-LTR4-TNT-insertion-10
[»] chr8 (59 HSPs)
chr8 (7-315)||(13367739-13368047)
chr8 (125-298)||(15750236-15750412)
chr8 (141-298)||(9812244-9812403)
chr8 (141-306)||(40399800-40399967)
chr8 (131-294)||(34796595-34796758)
chr8 (141-306)||(6374476-6374641)
chr8 (131-304)||(31233857-31234027)
chr8 (147-305)||(15227631-15227794)
chr8 (129-308)||(34156596-34156777)
chr8 (207-304)||(45358885-45358982)
chr8 (139-308)||(5295327-5295498)
chr8 (214-308)||(39463320-39463413)
chr8 (209-298)||(14234208-14234297)
chr8 (207-298)||(514948-515039)
chr8 (206-304)||(13496300-13496401)
chr8 (214-304)||(40228639-40228730)
chr8 (214-288)||(9880498-9880572)
chr8 (146-292)||(43969980-43970127)
chr8 (214-305)||(31899245-31899337)
chr8 (214-304)||(7839523-7839614)
chr8 (214-308)||(39698663-39698758)
chr8 (131-305)||(29312105-29312282)
chr8 (214-305)||(17921020-17921113)
chr8 (131-188)||(24245130-24245187)
chr8 (216-315)||(44713588-44713688)
chr8 (214-308)||(4760556-4760650)
chr8 (214-308)||(4989539-4989634)
chr8 (138-289)||(41679392-41679542)
chr8 (214-288)||(43448798-43448872)
chr8 (143-305)||(43561387-43561546)
chr8 (131-197)||(515076-515142)
chr8 (214-288)||(43084624-43084698)
chr8 (131-191)||(12339892-12339952)
chr8 (214-282)||(29025746-29025814)
chr8 (208-304)||(42179160-42179256)
chr8 (138-197)||(6115924-6115983)
chr8 (214-285)||(9304631-9304701)
chr8 (243-308)||(19574448-19574514)
chr8 (214-272)||(36669791-36669849)
chr8 (207-308)||(2375837-2375933)
chr8 (214-306)||(5790643-5790738)
chr8 (128-188)||(39765780-39765840)
chr8 (129-191)||(396135-396197)
chr8 (134-196)||(22699574-22699636)
chr8 (241-308)||(19438297-19438366)
chr8 (131-191)||(9419986-9420046)
chr8 (129-188)||(35233712-35233772)
chr8 (142-197)||(33746063-33746118)
chr8 (129-191)||(15160367-15160429)
chr8 (131-179)||(13496579-13496627)
chr8 (214-304)||(31693616-31693709)
chr8 (128-188)||(32061368-32061428)
chr8 (131-189)||(41178172-41178230)
chr8 (154-191)||(37559479-37559516)
chr8 (142-191)||(40362605-40362654)
chr8 (140-191)||(1162324-1162376)
chr8 (129-189)||(11257721-11257781)
chr8 (131-191)||(35908248-35908308)
chr8 (131-191)||(43724552-43724612)
[»] chr2 (73 HSPs)
chr2 (134-315)||(37038685-37038868)
chr2 (138-308)||(8540099-8540272)
chr2 (131-304)||(33055956-33056131)
chr2 (129-308)||(4658143-4658325)
chr2 (210-308)||(18719426-18719524)
chr2 (214-315)||(29396677-29396779)
chr2 (131-272)||(11188162-11188305)
chr2 (207-308)||(10195736-10195837)
chr2 (138-306)||(19164420-19164587)
chr2 (206-308)||(27726409-27726509)
chr2 (214-308)||(29808873-29808969)
chr2 (133-308)||(36685656-36685832)
chr2 (214-308)||(38926667-38926762)
chr2 (214-308)||(45081897-45081992)
chr2 (214-315)||(1423245-1423347)
chr2 (214-288)||(4288708-4288782)
chr2 (214-288)||(8774135-8774208)
chr2 (214-288)||(8789427-8789500)
chr2 (156-299)||(11132621-11132764)
chr2 (140-306)||(7872700-7872866)
chr2 (207-315)||(18579221-18579324)
chr2 (214-308)||(441228-441323)
chr2 (214-308)||(12342154-12342249)
chr2 (214-288)||(4133104-4133178)
chr2 (214-288)||(19636590-19636664)
chr2 (214-288)||(19835183-19835257)
chr2 (131-274)||(27964140-27964282)
chr2 (131-285)||(15083081-15083230)
chr2 (212-304)||(12565976-12566068)
chr2 (214-308)||(12393916-12394013)
chr2 (214-308)||(13562055-13562150)
chr2 (214-308)||(32228008-32228103)
chr2 (212-283)||(43971575-43971646)
chr2 (217-299)||(43480870-43480952)
chr2 (214-306)||(42743092-42743184)
chr2 (131-196)||(43971951-43972016)
chr2 (214-304)||(6220401-6220492)
chr2 (129-242)||(29412111-29412226)
chr2 (214-288)||(30855186-30855261)
chr2 (212-299)||(40608601-40608688)
chr2 (222-304)||(19469589-19469673)
chr2 (214-306)||(25383482-25383575)
chr2 (207-268)||(34455793-34455854)
chr2 (214-310)||(36106400-36106497)
chr2 (131-191)||(681679-681739)
chr2 (248-308)||(7028844-7028904)
chr2 (214-288)||(34546145-34546220)
chr2 (214-308)||(42004952-42005046)
chr2 (214-288)||(18717158-18717232)
chr2 (131-189)||(45423790-45423848)
chr2 (130-191)||(35799396-35799457)
chr2 (248-308)||(7042218-7042278)
chr2 (131-191)||(17695748-17695808)
chr2 (209-305)||(33482222-33482318)
chr2 (131-237)||(9391505-9391614)
chr2 (214-288)||(16807514-16807588)
chr2 (214-288)||(16846795-16846869)
chr2 (242-308)||(29411757-29411823)
chr2 (140-197)||(12565392-12565449)
chr2 (128-188)||(1198659-1198719)
chr2 (214-288)||(42753828-42753903)
chr2 (129-191)||(22620255-22620317)
chr2 (141-195)||(32879811-32879864)
chr2 (137-191)||(43427217-43427271)
chr2 (128-197)||(45301927-45301996)
chr2 (157-197)||(44712172-44712212)
chr2 (128-197)||(14833668-14833738)
chr2 (124-161)||(8774003-8774040)
chr2 (124-161)||(8789595-8789632)
chr2 (157-197)||(777884-777924)
chr2 (131-191)||(14286100-14286160)
chr2 (137-189)||(32022829-32022881)
chr2 (270-306)||(32254645-32254681)
[»] chr1 (71 HSPs)
chr1 (131-308)||(29567957-29568136)
chr1 (131-304)||(26594980-26595155)
chr1 (138-309)||(18794460-18794633)
chr1 (138-308)||(8894933-8895105)
chr1 (131-315)||(25560783-25560969)
chr1 (209-304)||(27209054-27209149)
chr1 (146-304)||(2610762-2610916)
chr1 (138-285)||(5225747-5225892)
chr1 (131-304)||(5044-5218)
chr1 (130-306)||(8989549-8989727)
chr1 (207-308)||(31699278-31699379)
chr1 (214-308)||(49468706-49468801)
chr1 (214-308)||(15823095-15823190)
chr1 (207-315)||(7191195-7191304)
chr1 (207-299)||(28538274-28538367)
chr1 (212-304)||(49900750-49900843)
chr1 (214-308)||(52125131-52125226)
chr1 (214-288)||(5463657-5463731)
chr1 (214-288)||(32806933-32807007)
chr1 (214-288)||(48009092-48009166)
chr1 (215-315)||(46286814-46286915)
chr1 (214-288)||(25151891-25151966)
chr1 (214-288)||(31798671-31798746)
chr1 (214-308)||(48025249-48025344)
chr1 (214-288)||(10842862-10842936)
chr1 (209-304)||(51244826-51244923)
chr1 (220-308)||(9915504-9915593)
chr1 (214-308)||(24611514-24611610)
chr1 (221-308)||(34110588-34110676)
chr1 (249-308)||(46554859-46554918)
chr1 (214-288)||(31491765-31491839)
chr1 (214-308)||(44108660-44108757)
chr1 (123-192)||(14607582-14607651)
chr1 (131-196)||(28410729-28410794)
chr1 (130-191)||(44938492-44938553)
chr1 (214-274)||(38530834-38530894)
chr1 (137-288)||(46270940-46271093)
chr1 (214-308)||(50094290-50094386)
chr1 (214-308)||(52066285-52066379)
chr1 (214-308)||(15573672-15573769)
chr1 (209-308)||(16757189-16757284)
chr1 (131-197)||(27209539-27209605)
chr1 (214-288)||(46046055-46046129)
chr1 (214-308)||(43759393-43759488)
chr1 (207-289)||(9092673-9092754)
chr1 (131-189)||(13579424-13579482)
chr1 (251-308)||(26755280-26755338)
chr1 (244-301)||(33622390-33622448)
chr1 (131-188)||(12484549-12484606)
chr1 (146-261)||(44556995-44557112)
chr1 (131-191)||(8565933-8565992)
chr1 (214-288)||(35847931-35848002)
chr1 (136-188)||(52707025-52707077)
chr1 (214-288)||(1740635-1740710)
chr1 (136-191)||(14373339-14373394)
chr1 (146-184)||(48920411-48920449)
chr1 (134-191)||(25487254-25487311)
chr1 (134-191)||(34047157-34047214)
chr1 (214-288)||(49426414-49426484)
chr1 (131-191)||(26352002-26352062)
chr1 (261-305)||(39477751-39477795)
chr1 (129-161)||(50591463-50591495)
chr1 (131-189)||(6596660-6596718)
chr1 (146-192)||(7190982-7191028)
chr1 (131-189)||(27124100-27124158)
chr1 (131-197)||(27721237-27721303)
chr1 (129-191)||(30293506-30293568)
chr1 (157-191)||(39125773-39125807)
chr1 (138-187)||(11799645-11799694)
chr1 (130-191)||(50249480-50249541)
chr1 (129-161)||(5463528-5463560)
[»] chr5 (53 HSPs)
chr5 (129-299)||(11977658-11977830)
chr5 (130-304)||(14161811-14161988)
chr5 (130-304)||(843083-843259)
chr5 (131-304)||(21634177-21634351)
chr5 (131-304)||(21642424-21642598)
chr5 (128-308)||(34534420-34534602)
chr5 (131-296)||(7736447-7736615)
chr5 (120-304)||(1309260-1309446)
chr5 (140-304)||(13974338-13974505)
chr5 (141-297)||(7721167-7721318)
chr5 (209-315)||(36164941-36165047)
chr5 (140-305)||(15166934-15167100)
chr5 (214-308)||(34446024-34446119)
chr5 (214-288)||(2729783-2729857)
chr5 (141-305)||(38369936-38370102)
chr5 (132-292)||(4911023-4911191)
chr5 (213-288)||(14005974-14006049)
chr5 (146-308)||(27797842-27798001)
chr5 (214-304)||(14620491-14620582)
chr5 (214-308)||(39566244-39566339)
chr5 (214-308)||(42661937-42662032)
chr5 (214-288)||(3306006-3306080)
chr5 (214-288)||(39730028-39730102)
chr5 (214-288)||(42978070-42978144)
chr5 (210-299)||(7748891-7748980)
chr5 (214-308)||(39335200-39335296)
chr5 (214-308)||(42104060-42104155)
chr5 (141-299)||(28591547-28591709)
chr5 (214-304)||(4425039-4425130)
chr5 (130-266)||(7579511-7579643)
chr5 (209-299)||(38362130-38362220)
chr5 (214-288)||(8336404-8336480)
chr5 (128-242)||(34381710-34381822)
chr5 (214-308)||(6519037-6519133)
chr5 (214-288)||(29807311-29807386)
chr5 (130-191)||(10344854-10344915)
chr5 (214-308)||(21375647-21375743)
chr5 (214-308)||(21319309-21319402)
chr5 (250-315)||(34208926-34208993)
chr5 (214-280)||(34972647-34972713)
chr5 (131-188)||(4631103-4631160)
chr5 (214-267)||(13761823-13761876)
chr5 (214-288)||(39504805-39504881)
chr5 (214-285)||(26660840-26660910)
chr5 (214-285)||(26932433-26932503)
chr5 (213-308)||(41645301-41645392)
chr5 (209-269)||(11195175-11195235)
chr5 (129-161)||(33822411-33822443)
chr5 (138-189)||(11970376-11970427)
chr5 (207-299)||(27557811-27557898)
chr5 (214-265)||(27600499-27600550)
chr5 (242-301)||(34382105-34382164)
chr5 (259-308)||(13761618-13761668)
[»] chr3 (65 HSPs)
chr3 (129-314)||(30315364-30315552)
chr3 (131-304)||(36844652-36844827)
chr3 (207-308)||(19373647-19373748)
chr3 (207-307)||(38141012-38141112)
chr3 (130-308)||(42072046-42072226)
chr3 (131-308)||(30934718-30934898)
chr3 (214-315)||(41287490-41287592)
chr3 (214-308)||(51398071-51398166)
chr3 (214-314)||(2458062-2458164)
chr3 (214-288)||(38016456-38016530)
chr3 (214-288)||(39359002-39359076)
chr3 (214-288)||(44676303-44676377)
chr3 (207-304)||(9189423-9189520)
chr3 (214-306)||(30431183-30431276)
chr3 (146-292)||(7230819-7230966)
chr3 (214-308)||(23525310-23525405)
chr3 (214-308)||(33194025-33194120)
chr3 (214-308)||(45213716-45213811)
chr3 (130-308)||(27067669-27067840)
chr3 (226-288)||(35557764-35557826)
chr3 (214-315)||(36460860-36460961)
chr3 (214-315)||(47895338-47895440)
chr3 (211-296)||(8817214-8817299)
chr3 (214-308)||(31853556-31853651)
chr3 (214-288)||(38363873-38363947)
chr3 (216-308)||(50088312-50088405)
chr3 (138-308)||(48903347-48903519)
chr3 (214-308)||(13756867-13756962)
chr3 (205-304)||(40487893-40487992)
chr3 (214-288)||(11393627-11393701)
chr3 (214-288)||(32492176-32492249)
chr3 (214-288)||(45518478-45518552)
chr3 (214-288)||(47138045-47138121)
chr3 (214-304)||(53200675-53200766)
chr3 (129-191)||(11337530-11337592)
chr3 (246-304)||(22857155-22857213)
chr3 (211-308)||(50346686-50346783)
chr3 (132-197)||(50646052-50646117)
chr3 (214-308)||(30426317-30426413)
chr3 (137-197)||(40717288-40717348)
chr3 (130-191)||(45460836-45460899)
chr3 (133-189)||(46160850-46160906)
chr3 (130-189)||(2985466-2985525)
chr3 (214-308)||(3152801-3152895)
chr3 (242-308)||(36729832-36729899)
chr3 (207-297)||(40717658-40717750)
chr3 (214-304)||(45566864-45566955)
chr3 (138-197)||(48901881-48901940)
chr3 (140-197)||(31190650-31190707)
chr3 (131-191)||(42571449-42571509)
chr3 (138-197)||(22857230-22857289)
chr3 (130-191)||(3986031-3986090)
chr3 (214-267)||(41850485-41850537)
chr3 (138-191)||(44064382-44064435)
chr3 (231-308)||(48901781-48901858)
chr3 (135-188)||(54918265-54918318)
chr3 (129-188)||(5244768-5244827)
chr3 (129-188)||(19897471-19897530)
chr3 (129-196)||(51057667-51057734)
chr3 (249-288)||(51482017-51482056)
chr3 (137-175)||(20028617-20028655)
chr3 (129-191)||(42886919-42886981)
chr3 (131-191)||(21205583-21205641)
chr3 (212-288)||(3985932-3986008)
chr3 (214-274)||(39168802-39168862)
[»] chr4 (73 HSPs)
chr4 (131-308)||(47817799-47817979)
chr4 (134-292)||(19451124-19451284)
chr4 (135-308)||(30261320-30261495)
chr4 (140-308)||(6991188-6991358)
chr4 (207-314)||(52162159-52162266)
chr4 (146-308)||(10573085-10573250)
chr4 (131-305)||(41496269-41496445)
chr4 (209-308)||(11364287-11364386)
chr4 (214-308)||(52957791-52957886)
chr4 (140-299)||(44650958-44651119)
chr4 (214-308)||(44571866-44571961)
chr4 (209-308)||(50203135-50203234)
chr4 (214-308)||(52848055-52848150)
chr4 (214-288)||(19878730-19878804)
chr4 (214-315)||(20448093-20448195)
chr4 (214-315)||(41920310-41920412)
chr4 (131-304)||(34413463-34413639)
chr4 (131-288)||(44061074-44061234)
chr4 (214-308)||(1819623-1819718)
chr4 (214-308)||(2728399-2728494)
chr4 (207-305)||(8971106-8971205)
chr4 (214-308)||(28734659-28734754)
chr4 (214-308)||(45043589-45043684)
chr4 (214-316)||(49089516-49089619)
chr4 (214-308)||(53814498-53814593)
chr4 (212-304)||(45839702-45839795)
chr4 (214-308)||(37654470-37654566)
chr4 (154-304)||(44868192-44868343)
chr4 (138-305)||(30779949-30780113)
chr4 (214-308)||(34316283-34316378)
chr4 (214-308)||(42605633-42605728)
chr4 (214-308)||(49080478-49080573)
chr4 (214-308)||(52253909-52254004)
chr4 (214-308)||(56373576-56373673)
chr4 (214-288)||(29370686-29370759)
chr4 (209-315)||(46392059-46392164)
chr4 (214-308)||(19930775-19930870)
chr4 (214-308)||(27653735-27653830)
chr4 (214-308)||(40345348-40345443)
chr4 (146-304)||(47458319-47458477)
chr4 (214-315)||(50623137-50623240)
chr4 (214-288)||(54042184-54042258)
chr4 (214-305)||(38991764-38991854)
chr4 (130-308)||(620091-620273)
chr4 (214-308)||(24940940-24941036)
chr4 (214-308)||(2493163-2493258)
chr4 (214-308)||(18430050-18430145)
chr4 (212-298)||(56460156-56460243)
chr4 (214-288)||(29519526-29519600)
chr4 (214-288)||(39984899-39984973)
chr4 (146-267)||(19903143-19903257)
chr4 (249-308)||(25123763-25123822)
chr4 (130-191)||(7905922-7905983)
chr4 (142-189)||(12241338-12241385)
chr4 (138-191)||(22220293-22220346)
chr4 (126-191)||(30106416-30106481)
chr4 (130-191)||(38510171-38510232)
chr4 (131-191)||(4505506-4505566)
chr4 (131-191)||(25231345-25231405)
chr4 (215-288)||(40837212-40837287)
chr4 (130-189)||(6510296-6510355)
chr4 (131-194)||(24157299-24157362)
chr4 (130-191)||(36558217-36558276)
chr4 (129-191)||(37624726-37624788)
chr4 (28-109)||(51991514-51991596)
chr4 (136-189)||(1019027-1019080)
chr4 (210-287)||(9809621-9809698)
chr4 (278-315)||(27943611-27943648)
chr4 (140-189)||(50203256-50203305)
chr4 (130-191)||(51733421-51733481)
chr4 (126-154)||(19878866-19878894)
chr4 (149-197)||(25123557-25123605)
chr4 (136-188)||(52915474-52915526)
[»] chr6 (44 HSPs)
chr6 (130-315)||(3988656-3988842)
chr6 (129-315)||(12459229-12459417)
chr6 (130-304)||(1502664-1502840)
chr6 (131-304)||(13011260-13011432)
chr6 (207-308)||(9940709-9940810)
chr6 (131-299)||(21271315-21271484)
chr6 (209-315)||(577115-577222)
chr6 (131-289)||(20226133-20226293)
chr6 (131-289)||(22120117-22120277)
chr6 (141-292)||(13503766-13503920)
chr6 (130-304)||(17828348-17828523)
chr6 (214-308)||(234095-234190)
chr6 (138-299)||(17552166-17552330)
chr6 (207-315)||(12322874-12322985)
chr6 (214-308)||(1134986-1135081)
chr6 (129-304)||(16127920-16128094)
chr6 (214-308)||(23259322-23259417)
chr6 (131-272)||(8957865-8958010)
chr6 (131-272)||(8961347-8961492)
chr6 (138-252)||(32193927-32194042)
chr6 (141-277)||(3847744-3847882)
chr6 (222-306)||(10540481-10540566)
chr6 (216-315)||(18737087-18737189)
chr6 (214-282)||(31443442-31443510)
chr6 (214-288)||(24163711-24163785)
chr6 (131-197)||(31233534-31233600)
chr6 (242-308)||(32193763-32193829)
chr6 (140-276)||(32619746-32619884)
chr6 (214-308)||(29713403-29713498)
chr6 (214-288)||(10520387-10520461)
chr6 (130-188)||(29927391-29927449)
chr6 (214-267)||(19675081-19675134)
chr6 (131-191)||(32429457-32429517)
chr6 (219-308)||(17267609-17267699)
chr6 (131-196)||(26405188-26405253)
chr6 (131-191)||(4850418-4850478)
chr6 (131-191)||(29400115-29400175)
chr6 (131-197)||(12321490-12321554)
chr6 (134-197)||(18737003-18737066)
chr6 (129-188)||(29915726-29915785)
chr6 (249-299)||(19600491-19600541)
chr6 (259-288)||(17246678-17246707)
chr6 (214-267)||(24555924-24555977)
chr6 (128-188)||(10494636-10494696)
[»] scaffold0300 (1 HSPs)
scaffold0300 (137-297)||(4637-4797)
[»] chr7 (71 HSPs)
chr7 (141-306)||(28289277-28289445)
chr7 (207-315)||(29636215-29636323)
chr7 (130-314)||(47461285-47461469)
chr7 (209-308)||(40339519-40339619)
chr7 (160-304)||(40753370-40753514)
chr7 (214-308)||(22298057-22298152)
chr7 (207-304)||(21819348-21819445)
chr7 (131-315)||(48843606-48843795)
chr7 (209-304)||(33939724-33939820)
chr7 (214-308)||(1742052-1742147)
chr7 (208-299)||(8293058-8293149)
chr7 (209-304)||(21752102-21752197)
chr7 (214-308)||(35777880-35777975)
chr7 (214-315)||(37815778-37815880)
chr7 (209-308)||(10476197-10476296)
chr7 (214-308)||(13405122-13405217)
chr7 (219-305)||(7759324-7759410)
chr7 (138-308)||(6563336-6563504)
chr7 (131-288)||(37490868-37491027)
chr7 (214-308)||(27947496-27947591)
chr7 (214-308)||(42879929-42880024)
chr7 (207-305)||(1031219-1031317)
chr7 (131-197)||(4268906-4268972)
chr7 (131-282)||(25055869-25056020)
chr7 (206-308)||(24133116-24133220)
chr7 (214-283)||(24680215-24680284)
chr7 (212-307)||(31196632-31196725)
chr7 (156-285)||(45499759-45499895)
chr7 (214-304)||(23155457-23155547)
chr7 (214-308)||(23935482-23935577)
chr7 (214-308)||(31418508-31418603)
chr7 (214-308)||(45948625-45948720)
chr7 (207-292)||(24780307-24780393)
chr7 (127-197)||(30312709-30312779)
chr7 (142-267)||(34012559-34012686)
chr7 (123-188)||(40800334-40800399)
chr7 (128-189)||(44057529-44057590)
chr7 (140-274)||(19303314-19303450)
chr7 (131-191)||(42286078-42286138)
chr7 (214-308)||(44453196-44453289)
chr7 (214-269)||(10599464-10599519)
chr7 (214-285)||(27935852-27935923)
chr7 (214-308)||(29530930-29531025)
chr7 (257-308)||(30312519-30312570)
chr7 (214-288)||(41137810-41137884)
chr7 (258-308)||(8604036-8604086)
chr7 (128-189)||(39135997-39136059)
chr7 (229-306)||(42753770-42753845)
chr7 (206-277)||(7335372-7335444)
chr7 (214-315)||(45933584-45933685)
chr7 (214-288)||(48684805-48684879)
chr7 (130-191)||(6747396-6747457)
chr7 (130-191)||(31929779-31929840)
chr7 (131-191)||(18292505-18292565)
chr7 (212-308)||(19104995-19105091)
chr7 (129-191)||(2297213-2297275)
chr7 (159-197)||(4268827-4268865)
chr7 (133-191)||(12983067-12983125)
chr7 (210-272)||(47187749-47187811)
chr7 (138-191)||(18270748-18270801)
chr7 (141-182)||(24793277-24793318)
chr7 (131-191)||(715784-715844)
chr7 (131-191)||(12977607-12977667)
chr7 (158-197)||(10476314-10476353)
chr7 (138-193)||(35778692-35778747)
chr7 (141-179)||(29635860-29635898)
chr7 (214-288)||(36808017-36808090)
chr7 (131-188)||(34274967-34275024)
chr7 (211-287)||(7900011-7900087)
chr7 (133-189)||(34782456-34782512)
chr7 (141-169)||(42754729-42754757)
[»] scaffold0565 (2 HSPs)
scaffold0565 (129-308)||(9865-10046)
scaffold0565 (214-308)||(9639-9733)
[»] scaffold0983 (1 HSPs)
scaffold0983 (137-308)||(606-778)
[»] scaffold0136 (1 HSPs)
scaffold0136 (141-308)||(9605-9772)
[»] scaffold0502 (1 HSPs)
scaffold0502 (207-308)||(562-663)
[»] scaffold0026 (1 HSPs)
scaffold0026 (129-308)||(4202-4383)
[»] scaffold0294 (1 HSPs)
scaffold0294 (214-308)||(3501-3596)
[»] scaffold0182 (1 HSPs)
scaffold0182 (209-308)||(18247-18346)
[»] scaffold0110 (1 HSPs)
scaffold0110 (214-308)||(24737-24832)
[»] scaffold0048 (1 HSPs)
scaffold0048 (214-308)||(62694-62789)
[»] scaffold0015 (1 HSPs)
scaffold0015 (214-308)||(21078-21173)
[»] scaffold0886 (1 HSPs)
scaffold0886 (141-189)||(4030-4078)
[»] scaffold0078 (1 HSPs)
scaffold0078 (251-308)||(1446-1505)
[»] scaffold0332 (1 HSPs)
scaffold0332 (131-191)||(3733-3793)


Alignment Details
Target: chr8 (Bit Score: 252; Significance: 1e-140; HSPs: 59)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 252; E-Value: 1e-140
Query Start/End: Original strand, 7 - 315
Target Start/End: Original strand, 13367739 - 13368047
Alignment:
Q  7 actaagagacaattttcatcaaaatttgatttaatcgaaataatttaactttacatttgcagaaattaccgatcatggctaaagtaaatatatttgtggt 106  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  13367739 actaagagacaattttcatcaaaatttgatttaatcgaaataatttaactttacatttgcagaaattaccgatcacggctaaagtaaatatatttgtggt 13367838  T
Q  107 atatattgatacaagaaaatcatatactccctccgtttcaaaatgaatatcgtttaagatttttacacacatattaagaaatgcattaattnnnnnnnga 206  Q
    ||||||||||||||||| |||||||||||||||||||||||||| ||||| ||||||| |||||||||||||||||||||||| |||||||       ||    
T  13367839 atatattgatacaagaagatcatatactccctccgtttcaaaataaatattgtttaaggtttttacacacatattaagaaatgtattaattaaaaaaaga 13367938  T
Q  207 agatgttattttaccaaattatcctaatcaattactggtttatttttcattaaagaaaaaataatactttggaagtagtgtatataatattaactgaagg 306  Q
    |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  13367939 agatgttattttaccatattatcctaatcaattactggtttatttttcattaaagaaaaaataatactttggaagtagtgtatataatattaattgaagg 13368038  T
Q  307 gtgtaattg 315  Q
    ||| |||||    
T  13368039 gtgcaattg 13368047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 84; E-Value: 7e-40
Query Start/End: Original strand, 125 - 298
Target Start/End: Original strand, 15750236 - 15750412
Alignment:
Q  125 atcatatactccctccgtttcaaaatgaatatcgtttaagatttttacacacatattaagaaatgcattaattnnnnnnn-ga-agatgttattttacca 222  Q
    |||| ||||||||| | ||||||||||||| |||||||   ||||||||||||||||||||||| ||||||||        || |||| |||||||||||    
T  15750236 atcaaatactcccttcatttcaaaatgaatgtcgtttatagtttttacacacatattaagaaatacattaattaaaagaaagagagatattattttacca 15750335  T
Q  223 aattatcctaatcaattactggtttatttttcattaaag-aaaaaataatactttggaagtagtgtatataatatta 298  Q
    ||||||||||||||| || |||||||||||||||||||| ||||||||||||||||||||||||||||||| |||||    
T  15750336 aattatcctaatcaactattggtttatttttcattaaagaaaaaaataatactttggaagtagtgtatatagtatta 15750412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 141 - 298
Target Start/End: Complemental strand, 9812403 - 9812244
Alignment:
Q  141 gtttcaaaatgaatatcgtttaagatttttacacacatattaagaaatgcattaattnnnnnnng--aagatgttattttaccaaattatcctaatcaat 238  Q
    ||||||||||||||  |||||||| |||||| ||||||||||||||||||| |||||          ||||||||||||||||||||||||||||||||     
T  9812403 gtttcaaaatgaatgccgtttaaggtttttatacacatattaagaaatgcactaattaaaataaagaaagatgttattttaccaaattatcctaatcaac 9812304  T
Q  239 tactggtttatttttcattaaagaaaaaataatactttggaagtagtgtatataatatta 298  Q
    || |||||| ||||||||||||||||||||  ||||||| ||||||||||||||||||||    
T  9812303 tattggtttgtttttcattaaagaaaaaattgtactttgaaagtagtgtatataatatta 9812244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 141 - 306
Target Start/End: Original strand, 40399800 - 40399967
Alignment:
Q  141 gtttcaaaatgaatatcgtttaagatttttacacacatattaagaaatgcattaattnnnnnnngaagat--gttattttaccaaattatcctaatcaat 238  Q
    |||||||||| ||| ||||||||  |||||||||| |||||||||||||||||||||         ||||  ||||||||||||||||||| |||||||     
T  40399800 gtttcaaaataaatgtcgtttaaagtttttacacatatattaagaaatgcattaattaaaagaaagagatatgttattttaccaaattatcataatcaac 40399899  T
Q  239 tactggtttatttttcattaaagaaaaaataatactttggaagtagtgtatataatattaactgaagg 306  Q
    || | |||| ||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||    
T  40399900 tattagtttgtttttcattaaagaaaaaataatactttgaaagtagtgtatataatattaattgaagg 40399967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 131 - 294
Target Start/End: Original strand, 34796595 - 34796758
Alignment:
Q  131 tactccctccgtttcaaaatgaatatcgtttaagatttttacacacatattaagaaatgcattaattnnnnnnngaagat--gttattttaccaaattat 228  Q
    |||||| ||||||||||||||||||| ||||| | ||||||||||||| ||||||||||||||||||         ||||  ||||||||| ||||||||    
T  34796595 tactccgtccgtttcaaaatgaatattgtttagg-tttttacacacatgttaagaaatgcattaattaaaagaaagagatatgttattttatcaaattat 34796693  T
Q  229 cctaatcaattactggtttatttttcattaaagaaaaaataatactttggaagtagtgtatataat 294  Q
    ||||||||| || |||||| |||||||||||| |||||||||||||||||||||||||||||||||    
T  34796694 cctaatcaactattggtttgtttttcattaaa-aaaaaataatactttggaagtagtgtatataat 34796758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 141 - 306
Target Start/End: Complemental strand, 6374641 - 6374476
Alignment:
Q  141 gtttcaaaatgaatatcgtttaagatttttacacacatattaagaaatgcattaattnnnnnnngaagatgttattttaccaaattatcctaatcaatta 240  Q
    |||| ||||||||  ||||||||| |||||| | | |||||| ||||| ||||||||        |||||||||||||||||||||||| ||||||| ||    
T  6374641 gttttaaaatgaacgtcgtttaaggtttttataaatatattaggaaatacattaattaaaaaaaaaagatgttattttaccaaattatcataatcaacta 6374542  T
Q  241 ctggtttatttttcattaaagaaaaaataatactttggaagtagtgtatataatattaactgaagg 306  Q
     | |||| ||||||||||||||||||||||||||||||||||| ||||||||||||||| ||||||    
T  6374541 ttagtttgtttttcattaaagaaaaaataatactttggaagtaatgtatataatattaattgaagg 6374476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 131 - 304
Target Start/End: Original strand, 31233857 - 31234027
Alignment:
Q  131 tactccctccgtttcaaaatgaatatcgtttaagatttttacacacatattaagaaatgcattaattnnnnnnngaagatgttattttaccaaattatcc 230  Q
    ||||||||| |||||||||||||| ||| ||||||||||||||||||||||||||||| ||||||||        || | |||| ||||| |||| ||||    
T  31233857 tactccctctgtttcaaaatgaatgtcgcttaagatttttacacacatattaagaaatacattaattaaaaa---aaaaagttactttacaaaatcatcc 31233953  T
Q  231 taatcaattactggtttatttttcattaaagaaaaaataatactttggaagtagtgtatataatattaactgaa 304  Q
    ||||||| || |||||||||||||||||||| |||||||||| ||| ||||||  |||||||||||||| ||||    
T  31233954 taatcaactattggtttatttttcattaaaggaaaaataataatttagaagtaccgtatataatattaattgaa 31234027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 147 - 305
Target Start/End: Complemental strand, 15227794 - 15227631
Alignment:
Q  147 aaatgaatatcgtttaagatttttacacacatattaagaaatgcattaattnnnnnnngaa--gatgttattttaccaaattatcctaatcaattactgg 244  Q
    |||||||| ||||||||||||||||||| ||||||||||||||||||||||        ||  |||||||||||| |||||||| ||||||||| | | |    
T  15227794 aaatgaatgtcgtttaagatttttacacgcatattaagaaatgcattaattaaaagaaaaaaagatgttattttatcaaattattctaatcaatcattag 15227695  T
Q  245 tttatttttcattaaagaa---aaaataatactttggaagtagtgtatataatattaactgaag 305  Q
    ||| |||||||||||||||   |||||||||||||| |||| ||||||||| |||||| |||||    
T  15227694 tttgtttttcattaaagaaaaaaaaataatactttgaaagttgtgtatatagtattaattgaag 15227631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 129 - 308
Target Start/End: Complemental strand, 34156777 - 34156596
Alignment:
Q  129 tatactccctccgtttcaaaatgaatatcgtttaagatttttacacacatattaagaaatgcattaattnnnnnnngaaga--tgttattttaccaaatt 226  Q
    ||||||||||| ||||||||||||||  |||||||  ||||||||   |||||| ||||||||||||||         |||  |||||||||| ||||||    
T  34156777 tatactccctctgtttcaaaatgaatggcgtttaaagtttttacatgtatattatgaaatgcattaattaaaagaaatagagctgttattttatcaaatt 34156678  T
Q  227 atcctaatcaattactggtttatttttcattaaagaaaaaataatactttggaagtagtgtatataatattaactgaagggt 308  Q
    ||| |||||||  | |||||| |||||||||||||||||||||||| ||||||||||||||| ||| |||||| ||||||||    
T  34156677 atcataatcaaccattggtttgtttttcattaaagaaaaaataatattttggaagtagtgtacatagtattaattgaagggt 34156596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 207 - 304
Target Start/End: Original strand, 45358885 - 45358982
Alignment:
Q  207 agatgttattttaccaaattatcctaatcaattactggtttatttttcattaaagaaaaaataatactttggaagtagtgtatataatattaactgaa 304  Q
    ||||||||||||||| ||||||  ||||||| || | |||| ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  45358885 agatgttattttaccgaattattttaatcaactattagtttgtttttcattaaagaaaaaataatactttggaagtagtgtatataatattaattgaa 45358982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 139 - 308
Target Start/End: Original strand, 5295327 - 5295498
Alignment:
Q  139 ccgtttcaaaatgaatatcgtttaagatttttacacacatattaagaaatgcattaattnnnnnnngaagatgt-tattttaccaaattatcctaatcaa 237  Q
    |||||| ||||||||| | ||||||  |||||||||||||||||||||||| ||| |||         |||| | |||||||||||||||||||||||||    
T  5295327 ccgttttaaaatgaatgttgtttaaagtttttacacacatattaagaaatgtattgattaaaagaaagagatatatattttaccaaattatcctaatcaa 5295426  T
Q  238 ttactggtttatttttcattaaagaaaa-aataatactttggaagtagtgtatataatattaactgaagggt 308  Q
     || || ||| ||||| ||||| ||||| ||||||| |||||||||||||||||||||||||| ||||||||    
T  5295427 ctattgctttgttttttattaatgaaaaaaataatattttggaagtagtgtatataatattaattgaagggt 5295498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 214 - 308
Target Start/End: Complemental strand, 39463413 - 39463320
Alignment:
Q  214 attttaccaaattatcctaatcaattactggtttatttttcattaaagaaaaaataatactttggaagtagtgtatataatattaactgaagggt 308  Q
    |||||||||| ||||||||||||| |  |||||| |||||||||||||||||||||||||||||||||||||||||||| |||||| ||||||||    
T  39463413 attttaccaa-ttatcctaatcaactgttggtttgtttttcattaaagaaaaaataatactttggaagtagtgtatatagtattaattgaagggt 39463320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 209 - 298
Target Start/End: Original strand, 14234208 - 14234297
Alignment:
Q  209 atgttattttaccaaattatcctaatcaattactggtttatttttcattaaagaaaaaataatactttggaagtagtgtatataatatta 298  Q
    |||||||||| |||||||||||||||||| || |||||| |||||| ||||||||||||||||| ||||||||||||||||||| |||||    
T  14234208 atgttattttgccaaattatcctaatcaactattggtttgtttttcgttaaagaaaaaataatattttggaagtagtgtatatagtatta 14234297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 207 - 298
Target Start/End: Complemental strand, 515039 - 514948
Alignment:
Q  207 agatgttattttaccaaattatcctaatcaattactggtttatttttcattaaagaaaaaataatactttggaagtagtgtatataatatta 298  Q
    ||||||||||||| ||||||||||||||||| || |||||| |||||||||| |||||| ||||||||| |||||||||||||||| |||||    
T  515039 agatgttattttagcaaattatcctaatcaactattggtttgtttttcattatagaaaatataatacttcggaagtagtgtatatagtatta 514948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 206 - 304
Target Start/End: Complemental strand, 13496401 - 13496300
Alignment:
Q  206 aagatgttattttaccaaattatcctaatcaattactggtttatttttcattaaagaaaaaataa---tactttggaagtagtgtatataatattaactg 302  Q
    ||||||||||||||||||||||||||||||||||| |||||| |||||| || ||||||||||||   |||||||||||||||||||| | |||||| ||    
T  13496401 aagatgttattttaccaaattatcctaatcaattattggtttgtttttctttcaagaaaaaataatactactttggaagtagtgtatacagtattaattg 13496302  T
Q  303 aa 304  Q
    ||    
T  13496301 aa 13496300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 214 - 304
Target Start/End: Complemental strand, 40228730 - 40228639
Alignment:
Q  214 attttaccaaattatcctaatcaattactggtttatttttcattaaagaaaaaataatactttggaagtagtgt-atataatattaactgaa 304  Q
    |||||||||||||||||||||||| || |||||| ||||||||||||||||||||||||||||||||||| ||| | |||||||||| ||||    
T  40228730 attttaccaaattatcctaatcaactattggtttgtttttcattaaagaaaaaataatactttggaagtaatgtaacataatattaattgaa 40228639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 214 - 288
Target Start/End: Original strand, 9880498 - 9880572
Alignment:
Q  214 attttaccaaattatcctaatcaattactggtttatttttcattaaagaaaaaataatactttggaagtagtgta 288  Q
    ||||||| |||||||||||||||| || || ||||||||||||||||||||||||||||||||||||||||||||    
T  9880498 attttacgaaattatcctaatcaactattgatttatttttcattaaagaaaaaataatactttggaagtagtgta 9880572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 146 - 292
Target Start/End: Original strand, 43969980 - 43970127
Alignment:
Q  146 aaaatgaatatcgtttaagatttttacacacatattaagaaatgcattaattnnnnnnngaaga-tgttattttaccaaattatcctaatcaattactgg 244  Q
    |||||||||  ||||||||||||||| ||||||| |||||||||||||||||        || | |||||||||| ||||||||||||||||| || ||     
T  43969980 aaaatgaatgccgtttaagatttttatacacatactaagaaatgcattaattaaaagaaaaaaaatgttattttatcaaattatcctaatcaactattga 43970079  T
Q  245 tttatttttcattaaagaaaaaataatactttggaagtagtgtatata 292  Q
    ||| | ||| |||||||||||||||||||||| |||||| ||||||||    
T  43970080 tttgtcttttattaaagaaaaaataatactttagaagtaatgtatata 43970127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 214 - 305
Target Start/End: Original strand, 31899245 - 31899337
Alignment:
Q  214 attttaccaaattatcctaatcaattactggtttatttttcattaaagaaaaaataatactttggaagtagtgt-atataatattaactgaag 305  Q
    |||||||||||||||||||||||| || || ||| ||||||||||||||||| ||||||||||||||||||||| | |||||||||| |||||    
T  31899245 attttaccaaattatcctaatcaactattgatttgtttttcattaaagaaaagataatactttggaagtagtgtaacataatattaattgaag 31899337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 214 - 304
Target Start/End: Complemental strand, 7839614 - 7839523
Alignment:
Q  214 attttaccaaattatcctaatcaattactggtttatttttcattaaagaaaaaataatactttggaagtagtgt-atataatattaactgaa 304  Q
    |||||||| ||||||| ||||||| || ||||||||||||||||||||||||||||||| |||||||||||||| | |||||||||| ||||    
T  7839614 attttaccgaattatcttaatcaactattggtttatttttcattaaagaaaaaataatattttggaagtagtgtaacataatattaattgaa 7839523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 214 - 308
Target Start/End: Original strand, 39698663 - 39698758
Alignment:
Q  214 attttaccaaattatcctaatcaattactggtttatttttcattaaagaaaaaataatactttggaagtagtgt-atataatattaactgaagggt 308  Q
    |||||||||||||||||||||||| || |||||| |||||||||||||||||||||||| |||||||||| ||| | ||| |||||| ||||||||    
T  39698663 attttaccaaattatcctaatcaactattggtttgtttttcattaaagaaaaaataatattttggaagtaatgtaacatagtattaattgaagggt 39698758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 131 - 305
Target Start/End: Original strand, 29312105 - 29312282
Alignment:
Q  131 tactccctccgtttcaaaatgaatatcgtttaagatttttacacacatattaagaaatgcattaattnnnnnnngaaga--tgttattttaccaaattat 228  Q
    |||||||||| ||||||||| ||| ||||||||| |||| ||||||| ||||| |||| ||||||||        ||||  |||||||||||  ||||||    
T  29312105 tactccctccatttcaaaataaatgtcgtttaaggttttcacacacagattaaaaaatacattaattaaaagaaaaagagatgttattttac--aattat 29312202  T
Q  229 cctaatcaattactggtttatttttcattaaagaaaaaataatact---ttggaagtagtgtatataatattaactgaag 305  Q
     |||||||| || |||||| ||||||||||||||||||||||||||   |  ||||||||||||||| |||||| |||||    
T  29312203 actaatcaactattggtttgtttttcattaaagaaaaaataatactacttctgaagtagtgtatatagtattaattgaag 29312282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 214 - 305
Target Start/End: Complemental strand, 17921113 - 17921020
Alignment:
Q  214 attttaccaaattatcctaatcaattactggtttatttttcattaaagaa-aaaataatactttggaagtagtgt-atataatattaactgaag 305  Q
    ||||||||||||||| |||||||| || |||||| ||||||||||||||| |||||||||||||||||||||||| | |||||||||| |||||    
T  17921113 attttaccaaattattctaatcaactattggtttgtttttcattaaagaaaaaaataatactttggaagtagtgtaacataatattaattgaag 17921020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 131 - 188
Target Start/End: Original strand, 24245130 - 24245187
Alignment:
Q  131 tactccctccgtttcaaaatgaatatcgtttaagatttttacacacatattaagaaat 188  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  24245130 tactccctccgtttcaaaatgaatgtcgtttaagatttttacacacatattaagaaat 24245187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 216 - 315
Target Start/End: Complemental strand, 44713688 - 44713588
Alignment:
Q  216 tttaccaaattatcctaatcaattactggtttatttttcattaaagaaaaaataatactttggaagtagtgt-atataatattaactgaagggtgtaatt 314  Q
    |||||||||||||| ||||||| || | ||||||||||||||||||||||||||||| |||| ||||||||| | | |||||||| |||||||| |||||    
T  44713688 tttaccaaattatcataatcaactattagtttatttttcattaaagaaaaaataatattttgaaagtagtgtaacacaatattaattgaagggtataatt 44713589  T
Q  315 g 315  Q
    |    
T  44713588 g 44713588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 214 - 308
Target Start/End: Original strand, 4760556 - 4760650
Alignment:
Q  214 attttaccaaattatcctaatcaattactggtttatttttcattaaagaaaaaataatactttggaagtagtgt-atataatattaactgaagggt 308  Q
    |||||||||||||||||||||||| || |||||| ||||||||||||| ||||||||||||||| ||||||||| | ||| |||||| ||||||||    
T  4760556 attttaccaaattatcctaatcaactattggtttgtttttcattaaag-aaaaataatactttgaaagtagtgtaacatagtattaattgaagggt 4760650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 214 - 308
Target Start/End: Complemental strand, 4989634 - 4989539
Alignment:
Q  214 attttaccaaattatcctaatcaattactggtttatttttcattaaagaaaaaataatactttggaagtagtgt-atataatattaactgaagggt 308  Q
    ||||| ||||||||||||| |||| || || ||| ||||||||||||||||||||||||||||| ||||||||| | |||||||||| ||||||||    
T  4989634 attttcccaaattatcctactcaactattgatttgtttttcattaaagaaaaaataatactttgtaagtagtgtaacataatattaattgaagggt 4989539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 138 - 289
Target Start/End: Complemental strand, 41679542 - 41679392
Alignment:
Q  138 tccgtttcaaaatgaatatcgtttaagatttttacacacatattaagaaatgcattaattnnnnnnngaaga--tgttattttaccaaattatcctaatc 235  Q
    ||||||| ||||| ||| |||||||||||||| |||||||||  ||||||||||||||||         |||  |||||||||||||||||||| |||||    
T  41679542 tccgttttaaaataaatgtcgtttaagatttt-acacacata--aagaaatgcattaattaaaagaaagagaggtgttattttaccaaattatcataatc 41679446  T
Q  236 aattactggtttatttttcattaaagaaaaaataatactttggaagtagtgtat 289  Q
    || || ||||||  ||||||||||||||||||||||| |||  |||||||||||    
T  41679445 aactattggtttgattttcattaaagaaaaaataatattttaaaagtagtgtat 41679392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 214 - 288
Target Start/End: Complemental strand, 43448872 - 43448798
Alignment:
Q  214 attttaccaaattatcctaatcaattactggtttatttttcattaaagaaaaaataatactttggaagtagtgta 288  Q
    |||||||||||||||||||||||| || | |||| ||||||||||||||||||||||||||||| ||||| ||||    
T  43448872 attttaccaaattatcctaatcaactattagtttgtttttcattaaagaaaaaataatactttgaaagtaatgta 43448798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 143 - 305
Target Start/End: Complemental strand, 43561546 - 43561387
Alignment:
Q  143 ttcaaaatgaatatcgtttaagatttttacacacatattaagaaatgcattaattnnnnnnngaagatgttattttaccaaattatcctaatcaattact 242  Q
    |||||||||||||||||||||  ||| || | | ||||||||||||| |||||||        || | ||||||||| ||||||||| |||||||| | |    
T  43561546 ttcaaaatgaatatcgtttaaagtttatatatatatattaagaaatgtattaattaaaaa---aaaaagttattttatcaaattatcttaatcaatcatt 43561450  T
Q  243 ggtttatttttcattaaagaaaaaataatactttggaagtagtgtatataatattaactgaag 305  Q
      ||||||||||||||||||||||||||||||||| ||||||  |||||  |||||| |||||    
T  43561449 aatttatttttcattaaagaaaaaataatactttgaaagtagaatatatggtattaattgaag 43561387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 131 - 197
Target Start/End: Complemental strand, 515142 - 515076
Alignment:
Q  131 tactccctccgtttcaaaatgaatatcgtttaagatttttacacacatattaagaaatgcattaatt 197  Q
    |||||||||||||||||||||||| || |||||| |||||| ||||||||||||||||| |||||||    
T  515142 tactccctccgtttcaaaatgaatgtcatttaaggtttttatacacatattaagaaatgtattaatt 515076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 214 - 288
Target Start/End: Original strand, 43084624 - 43084698
Alignment:
Q  214 attttaccaaattatcctaatcaattactggtttatttttcattaaagaaaaaataatactttggaagtagtgta 288  Q
    |||||||||||||| ||||||||| || |||||| | |||||||||||||||||||||  |||||||||||||||    
T  43084624 attttaccaaattaccctaatcaactattggtttgtgtttcattaaagaaaaaataattttttggaagtagtgta 43084698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 131 - 191
Target Start/End: Complemental strand, 12339952 - 12339892
Alignment:
Q  131 tactccctccgtttcaaaatgaatatcgtttaagatttttacacacatattaagaaatgca 191  Q
    |||||| ||| ||||||||||||| ||||||||| ||||||||||||||||||||||||||    
T  12339952 tactccgtccatttcaaaatgaatgtcgtttaaggtttttacacacatattaagaaatgca 12339892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 214 - 282
Target Start/End: Original strand, 29025746 - 29025814
Alignment:
Q  214 attttaccaaattatcctaatcaattactggtttatttttcattaaagaaaaaataatactttggaagt 282  Q
    |||||||||||||||||||||||| || || ||| ||||| ||||||||||||||||||| ||||||||    
T  29025746 attttaccaaattatcctaatcaactattgatttgttttttattaaagaaaaaataatacattggaagt 29025814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 208 - 304
Target Start/End: Complemental strand, 42179256 - 42179160
Alignment:
Q  208 gatgttattttaccaaattatcctaatcaattactggtttatttttcattaaagaaaaaataatactttggaagtagtgtatataatattaactgaa 304  Q
    |||| |||||||| |||||||| |||| || || | |||| ||||||||||||||||||||||||||||  || ||||||||||| |||||| ||||    
T  42179256 gatgatattttactaaattatcataattaactattagtttgtttttcattaaagaaaaaataatacttttaaaatagtgtatatagtattaattgaa 42179160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 138 - 197
Target Start/End: Original strand, 6115924 - 6115983
Alignment:
Q  138 tccgtttcaaaatgaatatcgtttaagatttttacacacatattaagaaatgcattaatt 197  Q
    ||||||||||||||| | ||||||||| |||||||||||||||||| |||||||||||||    
T  6115924 tccgtttcaaaatgagtgtcgtttaaggtttttacacacatattaaaaaatgcattaatt 6115983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 214 - 285
Target Start/End: Original strand, 9304631 - 9304701
Alignment:
Q  214 attttaccaaattatcctaatcaattactggtttatttttcattaaagaaaaaataatactttggaagtagt 285  Q
    |||||||||||||||||||||||| || || ||| |||||| ||||||||||||||||| ||||||||||||    
T  9304631 attttaccaaattatcctaatcaactattgatttgtttttc-ttaaagaaaaaataatattttggaagtagt 9304701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 243 - 308
Target Start/End: Complemental strand, 19574514 - 19574448
Alignment:
Q  243 ggtttatttttcattaaagaaaaaataatactttggaagtagtgt-atataatattaactgaagggt 308  Q
    ||||| |||||||||||||||||||||||| |||||||||||||| ||||| |||||| ||||||||    
T  19574514 ggtttgtttttcattaaagaaaaaataatattttggaagtagtgtaatatagtattaattgaagggt 19574448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 214 - 272
Target Start/End: Original strand, 36669791 - 36669849
Alignment:
Q  214 attttaccaaattatcctaatcaattactggtttatttttcattaaagaaaaaataata 272  Q
    |||||||||||||||||||||||| || | |||| ||||||||||||||||||||||||    
T  36669791 attttaccaaattatcctaatcaactattagtttgtttttcattaaagaaaaaataata 36669849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 207 - 308
Target Start/End: Original strand, 2375837 - 2375933
Alignment:
Q  207 agatgttattttaccaaattatcctaatcaattactggtttatttttcattaaagaaaaaataatactttggaagtagtgtatataatattaactgaagg 306  Q
    ||||||||||||| |||||| || |||||||| | |||||| ||||||||||||||||||| |     |||||| ||||||||||| |||||| ||||||    
T  2375837 agatgttattttatcaaattgtcttaatcaatcattggtttgtttttcattaaagaaaaaaaa-----ttggaaatagtgtatatattattaattgaagg 2375931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 214 - 306
Target Start/End: Original strand, 5790643 - 5790738
Alignment:
Q  214 attttaccaaattatcctaatcaattactggtttatttttcattaaag--aaaaaataatactttggaagtagtgt-atataatattaactgaagg 306  Q
    |||||||||||||||||||||||| || ||||||  ||||||||| ||  ||||||||||| |||| ||||||||| | |||||||||| ||||||    
T  5790643 attttaccaaattatcctaatcaactattggtttgcttttcattagagaaaaaaaataatattttgaaagtagtgtaagataatattaattgaagg 5790738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 128 - 188
Target Start/End: Original strand, 39765780 - 39765840
Alignment:
Q  128 atatactccctccgtttcaaaatgaatatcgtttaagatttttacacacatattaagaaat 188  Q
    ||||||||||||||||||||||||| | |||||| || | |||||||||||||||||||||    
T  39765780 atatactccctccgtttcaaaatgagtgtcgttttaggtgtttacacacatattaagaaat 39765840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 129 - 191
Target Start/End: Original strand, 396135 - 396197
Alignment:
Q  129 tatactccctccgtttcaaaatgaatatcgtttaagatttttacacacatattaagaaatgca 191  Q
    |||||||| ||||||||||||||| | |||||| || | ||||||||||||||||||||||||    
T  396135 tatactccatccgtttcaaaatgagtgtcgttttaggtctttacacacatattaagaaatgca 396197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 134 - 196
Target Start/End: Complemental strand, 22699636 - 22699574
Alignment:
Q  134 tccctccgtttcaaaatgaatatcgtttaagatttttacacacatattaagaaatgcattaat 196  Q
    ||||||||||||||||||| | ||||||||| || || |||||||||||||||||||| ||||    
T  22699636 tccctccgtttcaaaatgagtgtcgtttaaggttgttccacacatattaagaaatgcaataat 22699574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 241 - 308
Target Start/End: Complemental strand, 19438366 - 19438297
Alignment:
Q  241 ctggtttatttttcattaaagaaaaaat-aatactttggaagtagtgt-atataatattaactgaagggt 308  Q
    ||||||| |||||||||||||||||||| |||| |||||||||||||| ||||| |||||| ||||||||    
T  19438366 ctggtttgtttttcattaaagaaaaaataaatattttggaagtagtgtaatatagtattaattgaagggt 19438297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 131 - 191
Target Start/End: Original strand, 9419986 - 9420046
Alignment:
Q  131 tactccctccgtttcaaaatgaatatcgtttaagatttttacacacatattaagaaatgca 191  Q
    |||||||||||||||||||||| | ||||||||  || || ||||||||||||||||||||    
T  9419986 tactccctccgtttcaaaatgagtgtcgtttaaagttgttccacacatattaagaaatgca 9420046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 129 - 188
Target Start/End: Complemental strand, 35233772 - 35233712
Alignment:
Q  129 tatactccctccgtttcaaaatgaatatcgtttaa-gatttttacacacatattaagaaat 188  Q
    |||||||||||| ||||||||||||||| |||||| | |||||||||||| ||||||||||    
T  35233772 tatactccctccatttcaaaatgaatattgtttaaggttttttacacacacattaagaaat 35233712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 142 - 197
Target Start/End: Original strand, 33746063 - 33746118
Alignment:
Q  142 tttcaaaatgaatatcgtttaagatttttacacacatattaagaaatgcattaatt 197  Q
    ||||||||||||| || |||||| ||||||||| |||||||| |||||||||||||    
T  33746063 tttcaaaatgaatgtcatttaaggtttttacacgcatattaaaaaatgcattaatt 33746118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 129 - 191
Target Start/End: Original strand, 15160367 - 15160429
Alignment:
Q  129 tatactccctccgtttcaaaatgaatatcgtttaagatttttacacacatattaagaaatgca 191  Q
    |||| ||||||||||||||||||| | || ||| || | ||||||||||||||||||||||||    
T  15160367 tataatccctccgtttcaaaatgagtgtcattttaggtgtttacacacatattaagaaatgca 15160429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 131 - 179
Target Start/End: Complemental strand, 13496627 - 13496579
Alignment:
Q  131 tactccctccgtttcaaaatgaatatcgtttaagatttttacacacata 179  Q
    |||| ||||||||||||||| ||  ||||||||||||||||||||||||    
T  13496627 tacttcctccgtttcaaaataaacgtcgtttaagatttttacacacata 13496579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 214 - 304
Target Start/End: Original strand, 31693616 - 31693709
Alignment:
Q  214 attttaccaaattatcctaatcaatt---actggtttatttttcattaaagaaaaaataatactttggaagtagtgt-atataatattaactgaa 304  Q
    ||||||| |||||||||||||||| |   | | |||| |||||||||||||| ||||||||||||||||| |||||| | |||||||||| ||||    
T  31693616 attttactaaattatcctaatcaactggtattagtttgtttttcattaaagataaaataatactttggaa-tagtgtaacataatattaattgaa 31693709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 128 - 188
Target Start/End: Original strand, 32061368 - 32061428
Alignment:
Q  128 atatactccctccgtttcaaaatgaatatcgtttaagatttttacacacatattaagaaat 188  Q
    |||||||| |||||||||| ||||| | ||||||||| ||||  |||||||||||||||||    
T  32061368 atatactctctccgtttcacaatgagtgtcgtttaagtttttggcacacatattaagaaat 32061428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 131 - 189
Target Start/End: Original strand, 41178172 - 41178230
Alignment:
Q  131 tactccctccgtttcaaaatgaatatcgtttaagatttttacacacatattaagaaatg 189  Q
    |||||||| ||| ||||||||  | ||||||||| |||||||||||| |||||||||||    
T  41178172 tactcccttcgtctcaaaatgggtgtcgtttaaggtttttacacacaaattaagaaatg 41178230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 154 - 191
Target Start/End: Original strand, 37559479 - 37559516
Alignment:
Q  154 tatcgtttaagatttttacacacatattaagaaatgca 191  Q
    |||||||| |||| ||||||||||||||||||||||||    
T  37559479 tatcgttttagatgtttacacacatattaagaaatgca 37559516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 142 - 191
Target Start/End: Complemental strand, 40362654 - 40362605
Alignment:
Q  142 tttcaaaatgaatatcgtttaagatttttacacacatattaagaaatgca 191  Q
    ||||||||||||| |||||| || | |||||||| |||||||||||||||    
T  40362654 tttcaaaatgaatgtcgttttaggtatttacacatatattaagaaatgca 40362605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #56
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 140 - 191
Target Start/End: Original strand, 1162324 - 1162376
Alignment:
Q  140 cgtttcaaaatgaatatcgtttaagatttt-tacacacatattaagaaatgca 191  Q
    ||||| ||||| |||||||||||||||||| ||| || |||||||||||||||    
T  1162324 cgttttaaaatcaatatcgtttaagattttctacgcatatattaagaaatgca 1162376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #57
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 129 - 189
Target Start/End: Complemental strand, 11257781 - 11257721
Alignment:
Q  129 tatactccctccgtttcaaaatgaatatcgtttaagatttttacacacatattaagaaatg 189  Q
    |||||||||| ||||| | ||||| |  ||||||||||||| ||||||| |||||||||||    
T  11257781 tatactcccttcgttttacaatgagtgccgtttaagattttgacacacaaattaagaaatg 11257721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #58
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 131 - 191
Target Start/End: Original strand, 35908248 - 35908308
Alignment:
Q  131 tactccctccgtttcaaaatgaatatcgtttaagatttttacacacatattaagaaatgca 191  Q
    ||||||||||||||||||||||   || |||| | |||||  |||||||||||||||||||    
T  35908248 tactccctccgtttcaaaatgagcgtcttttatggtttttgtacacatattaagaaatgca 35908308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #59
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 131 - 191
Target Start/End: Complemental strand, 43724612 - 43724552
Alignment:
Q  131 tactccctccgtttcaaaatgaatatcgtttaagatttttacacacatattaagaaatgca 191  Q
    |||||| ||||||||||||||| | |||||| |||| ||||||||| || ||| |||||||    
T  43724612 tactccttccgtttcaaaatgagtgtcgttttagatgtttacacacgtactaaaaaatgca 43724552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 111; Significance: 5e-56; HSPs: 73)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 111; E-Value: 5e-56
Query Start/End: Original strand, 134 - 315
Target Start/End: Original strand, 37038685 - 37038868
Alignment:
Q  134 tccctccgtttcaaaatgaatatcgtttaagatttttacacacatattaagaaatgcattaattnnnnnnn-ga-agatgttattttaccaaattatcct 231  Q
    ||||||||||||||||||| | ||||||||||||||||||||||||||||||||| ||||||||        || |||||||||||||||||||||||||    
T  37038685 tccctccgtttcaaaatgagtgtcgtttaagatttttacacacatattaagaaatacattaattaaaagaaagagagatgttattttaccaaattatcct 37038784  T
Q  232 aatcaattactggtttatttttcattaaagaaaaaataatactttggaagtagtgtatataatattaactgaagggtgtaattg 315  Q
    |||||| || |||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||| |||||||| ||||||    
T  37038785 aatcaactattggtttgtttttcattaaagaaaaaataatactttgaaagtagtgtatataatattaattgaagggtataattg 37038868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 138 - 308
Target Start/End: Complemental strand, 8540272 - 8540099
Alignment:
Q  138 tccgtttcaaaatgaatatcgtttaagatttttacacacatattaagaaatgcattaattnnnnnnngaaga--tgttattttaccaaattatcctaatc 235  Q
    ||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||        ||||  |||||||||| |||||||||||||||    
T  8540272 tccgttttaaaatgaatatagtttaagatttttacacacatattaagaaatgcattaattaaaagaaaaagagatgttattttatcaaattatcctaatc 8540173  T
Q  236 aattactggtttatttttcattaaagaa-aaaataatactttggaagtagtgtatataatattaactgaagggt 308  Q
    || || | |||| ||||||||||||||| ||||||||| ||| ||||||||||| |||||||||| ||||||||    
T  8540172 aactattagtttgtttttcattaaagaaaaaaataatattttagaagtagtgtaaataatattaattgaagggt 8540099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 131 - 304
Target Start/End: Complemental strand, 33056131 - 33055956
Alignment:
Q  131 tactccctccgtttcaaaatgaatatcgtttaagatttttacacacatattaagaaatgcattaattnnnnnnn-ga-agatgttattttaccaaattat 228  Q
    |||||| ||||||| ||||||||| |||||||||| ||||||||||||||||| |||||  ||||||        || ||||||||||||||||||||||    
T  33056131 tactccatccgttttaaaatgaatgtcgtttaagaattttacacacatattaaaaaatgtcttaattaaaagaaagagagatgttattttaccaaattat 33056032  T
Q  229 cctaatcaattactggtttatttttcattaaagaaaaaataatactttggaagtagtgtatataatattaactgaa 304  Q
    | ||||||| || |||||| ||||||||||||||||||||||||| ||| |||||||||||||| |||||| ||||    
T  33056031 cataatcaactattggtttgtttttcattaaagaaaaaataatacattgaaagtagtgtatatagtattaattgaa 33055956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 129 - 308
Target Start/End: Original strand, 4658143 - 4658325
Alignment:
Q  129 tatactccctccgtttcaaaatgaatatcgtttaagatttttacacacatattaagaaatgcattaattnnnnnnng--aagatgttattttaccaaatt 226  Q
    ||||||| |||| ||||||||||| | ||||||||| |||||||||||||||||| ||||| |||||||          |||||||||||||||||||||    
T  4658143 tatactcactccatttcaaaatgagtgtcgtttaag-tttttacacacatattaaaaaatgtattaattaaaataaagaaagatgttattttaccaaatt 4658241  T
Q  227 atcctaatcaattactggtttatttttcattaaagaaaaaa--taatactttggaagtagtgtatataatattaactgaagggt 308  Q
     |||||||||| || |||||| |||||||||||||||||||  |||||||||| |||||||||||||| |||||| ||||||||    
T  4658242 gtcctaatcaactattggtttgtttttcattaaagaaaaaaattaatactttgaaagtagtgtatatagtattaattgaagggt 4658325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 210 - 308
Target Start/End: Original strand, 18719426 - 18719524
Alignment:
Q  210 tgttattttaccaaattatcctaatcaattactggtttatttttcattaaagaaaaaataatactttggaagtagtgtatataatattaactgaagggt 308  Q
    |||||||||||||||||||||||||||| || |||||| ||||||||||||||||||||||||||||| || ||||||||||| |||||| ||||||||    
T  18719426 tgttattttaccaaattatcctaatcaactattggtttgtttttcattaaagaaaaaataatactttgaaaatagtgtatatagtattaattgaagggt 18719524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 214 - 315
Target Start/End: Original strand, 29396677 - 29396779
Alignment:
Q  214 attttaccaaattatcctaatcaattactggtttatttttcattaaagaaaaaataatactttggaagtagtgt-atataatattaactgaagggtgtaa 312  Q
    |||||||||||||||||||||||| || |||||| ||||||||||||||||||||||||||||||||||||||| | |||||||||| |||||||| |||    
T  29396677 attttaccaaattatcctaatcaactattggtttgtttttcattaaagaaaaaataatactttggaagtagtgtaacataatattaattgaagggtataa 29396776  T
Q  313 ttg 315  Q
    |||    
T  29396777 ttg 29396779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 131 - 272
Target Start/End: Original strand, 11188162 - 11188305
Alignment:
Q  131 tactccctccgtttcaaaatgaatatcgtttaagatttttacacacatattaagaaatgcattaat-tnnnnnnnga-agatgttattttaccaaattat 228  Q
    |||||||||||||||||||||||| ||||||||| || ||||||||||||||| ||||||||||||         || ||||||||||||||||| ||||    
T  11188162 tactccctccgtttcaaaatgaatgtcgtttaaggttcttacacacatattaataaatgcattaatcaaaagaaagagagatgttattttaccaagttat 11188261  T
Q  229 cctaatcaattactggtttatttttcattaaagaaaaaataata 272  Q
    ||||||||| || ||| || ||||||||||||||||||||||||    
T  11188262 cctaatcaactattgggttgtttttcattaaagaaaaaataata 11188305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 207 - 308
Target Start/End: Complemental strand, 10195837 - 10195736
Alignment:
Q  207 agatgttattttaccaaattatcctaatcaattactggtttatttttcattaaagaaaaaataatactttggaagtagtgtatataatattaactgaagg 306  Q
    ||||||||||||||||||||||||||||||| || || ||| ||||| |||||||||||||||||| |||||||||||||||||||  ||||| ||||||    
T  10195837 agatgttattttaccaaattatcctaatcaactattgttttgttttttattaaagaaaaaataatattttggaagtagtgtatatatcattaattgaagg 10195738  T
Q  307 gt 308  Q
    ||    
T  10195737 gt 10195736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 138 - 306
Target Start/End: Complemental strand, 19164587 - 19164420
Alignment:
Q  138 tccgtttcaaaatgaatatcgtttaagatttttacacacatattaagaaatgcattaattnnnnnnngaagat--gttattttaccaaattatcctaatc 235  Q
    |||||||||||| |||| | ||||||| |||||||||| ||||||||||||  |||||||         ||||  ||||||||||||||||||   ||||    
T  19164587 tccgtttcaaaacgaatgttgtttaaggtttttacacatatattaagaaatttattaattaaaagaaagagatatgttattttaccaaattat---aatc 19164491  T
Q  236 aattactggtttatttttcattaaagaaaaaataatactttggaagtagtgtatataatattaactgaagg 306  Q
    || || |||||| || |||||||||||||||||||||||||| ||||||||||||||||||||| ||||||    
T  19164490 aactattggtttgttattcattaaagaaaaaataatactttgaaagtagtgtatataatattaattgaagg 19164420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 206 - 308
Target Start/End: Original strand, 27726409 - 27726509
Alignment:
Q  206 aagatgttattttaccaaattatcctaatcaattactggtttatttttcattaaagaaaaaataatactttggaagtagtgtatataatattaactgaag 305  Q
    |||||||||||||||||||||||||||||||| || |||||| |||||||||||  ||||||||||| |||||||||| |||||||| |||||| |||||    
T  27726409 aagatgttattttaccaaattatcctaatcaactattggtttgtttttcattaa--aaaaaataataatttggaagtaatgtatatactattaattgaag 27726506  T
Q  306 ggt 308  Q
    |||    
T  27726507 ggt 27726509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 214 - 308
Target Start/End: Complemental strand, 29808969 - 29808873
Alignment:
Q  214 attttaccaaattatcctaatcaattactggtttatttttcattaaagaa-aaaataatactttggaagtagtgt-atataatattaactgaagggt 308  Q
    |||||||||||||||||||||||| || |||||| ||||||||||||||| |||||||||||||||||||||||| | |||||||||| ||||||||    
T  29808969 attttaccaaattatcctaatcaactattggtttgtttttcattaaagaaaaaaataatactttggaagtagtgtaacataatattaagtgaagggt 29808873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 133 - 308
Target Start/End: Original strand, 36685656 - 36685832
Alignment:
Q  133 ctccctccgtttcaaaa-tgaatatcgtttaagatttttacacacatattaagaaatgcattaattnnnnnnnga-agatgttattttaccaaattatcc 230  Q
    |||||||||||| |||| ||||| ||||||||| ||| |||||||||||||| ||||  |||||||        | | ||||||||||||||||||||||    
T  36685656 ctccctccgttttaaaaatgaatgtcgtttaaggtttatacacacatattaataaatatattaattaaaaaaaaagatatgttattttaccaaattatcc 36685755  T
Q  231 taatcaattactggtttatttttcattaaagaaaaaataatactttggaagtagtgtatataatattaactgaagggt 308  Q
    |||||||||| ||||||  ||||||| ||||||||||||||| |||  ||||||||| |||| |||||| ||||||||    
T  36685756 taatcaattattggttt-gttttcatcaaagaaaaaataatattttcaaagtagtgtttatagtattaattgaagggt 36685832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 214 - 308
Target Start/End: Complemental strand, 38926762 - 38926667
Alignment:
Q  214 attttaccaaattatcctaatcaattactggtttatttttcattaaagaaaaaataatactttggaagtagtgt-atataatattaactgaagggt 308  Q
    |||||||||||||||| ||||||| || |||||| ||||||||||||||||||||||||||||||||||||||| | ||| |||||| ||||||||    
T  38926762 attttaccaaattatcataatcaactattggtttgtttttcattaaagaaaaaataatactttggaagtagtgtaacatagtattaattgaagggt 38926667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 214 - 308
Target Start/End: Original strand, 45081897 - 45081992
Alignment:
Q  214 attttaccaaattatcctaatcaattactggtttatttttcattaaagaaaaaataatactttggaagtagtgt-atataatattaactgaagggt 308  Q
    |||||||||||||||||||||||| || || ||| ||||||||||||||||||||||| ||||||||||||||| | |||||||||| ||||||||    
T  45081897 attttaccaaattatcctaatcaactattgttttgtttttcattaaagaaaaaataatgctttggaagtagtgtaacataatattaattgaagggt 45081992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 214 - 315
Target Start/End: Complemental strand, 1423347 - 1423245
Alignment:
Q  214 attttaccaaattatcctaatcaattactggtttatttttcattaaagaaaaaataatactttggaagtagtgt-atataatattaactgaagggtgtaa 312  Q
    |||||||||||||||||||||||| || |||||| ||| |||||||||||||||||||| |||||||||||||| | ||| |||||| |||||||| |||    
T  1423347 attttaccaaattatcctaatcaactattggtttgtttctcattaaagaaaaaataatattttggaagtagtgtaacatactattaattgaagggtataa 1423248  T
Q  313 ttg 315  Q
    |||    
T  1423247 ttg 1423245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 214 - 288
Target Start/End: Original strand, 4288708 - 4288782
Alignment:
Q  214 attttaccaaattatcctaatcaattactggtttatttttcattaaagaaaaaataatactttggaagtagtgta 288  Q
    |||||||||||||||||||||||| || | |||| ||||||||||||||||||||||||||||||||||||||||    
T  4288708 attttaccaaattatcctaatcaactattagtttgtttttcattaaagaaaaaataatactttggaagtagtgta 4288782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 214 - 288
Target Start/End: Complemental strand, 8774208 - 8774135
Alignment:
Q  214 attttaccaaattatcctaatcaattactggtttatttttcattaaagaaaaaataatactttggaagtagtgta 288  Q
    |||||||||||||||||||||||| || ||||||||||||||||||||| |||||||||||||||||||||||||    
T  8774208 attttaccaaattatcctaatcaactattggtttatttttcattaaaga-aaaataatactttggaagtagtgta 8774135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 214 - 288
Target Start/End: Original strand, 8789427 - 8789500
Alignment:
Q  214 attttaccaaattatcctaatcaattactggtttatttttcattaaagaaaaaataatactttggaagtagtgta 288  Q
    |||||||||||||||||||||||| || |||||||||||||||||||| ||||||||||||||||||||||||||    
T  8789427 attttaccaaattatcctaatcaactattggtttatttttcattaaag-aaaaataatactttggaagtagtgta 8789500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 156 - 299
Target Start/End: Complemental strand, 11132764 - 11132621
Alignment:
Q  156 tcgtttaagatttttacacacatattaagaaatgcattaattnnnnnnngaagatgttattttaccaaattatcctaatcaattactggtttatttttca 255  Q
    ||||||||  ||||||| ||||||||||||||||||||||||        ||||| |||| ||||||||||||  ||||||| || | |||| |||||||    
T  11132764 tcgtttaaagtttttacgcacatattaagaaatgcattaattaaaagaaaaagatattatattaccaaattattataatcaactatttgtttgtttttca 11132665  T
Q  256 ttaaagaaaaaataatactttggaagtagtgtatataatattaa 299  Q
    ||||||||||||||||| |||| ||||| |||||||| ||||||    
T  11132664 ttaaagaaaaaataatattttgaaagtaatgtatatagtattaa 11132621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 140 - 306
Target Start/End: Original strand, 7872700 - 7872866
Alignment:
Q  140 cgtttcaaaatgaatatcgtttaagatttttacacacatattaagaaatgcattaattnnnnnnngaagatgttattttaccaaattatcctaatcaatt 239  Q
    ||||| ||||||||| | ||||| | |||||||||||||||||| |||| ||||||||         |||| ||||||||||||||||| || ||| | |    
T  7872700 cgttttaaaatgaatgttgtttatggtttttacacacatattaaaaaattcattaattaaaagaaagagatattattttaccaaattattctgatcgact 7872799  T
Q  240 actggtttatttttcattaaagaaaaaataatactttggaagtagtgtatataatattaactgaagg 306  Q
    | || ||| ||||||||||||||||||||||||||||| ||||||| | |||| |||||| ||||||    
T  7872800 attgatttgtttttcattaaagaaaaaataatactttgaaagtagtatttatagtattaattgaagg 7872866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 207 - 315
Target Start/End: Complemental strand, 18579324 - 18579221
Alignment:
Q  207 agatgttattttaccaaattatcctaatcaattactggtttatttttcattaaagaaaaaataatactttggaagtagtgtatataatattaactgaagg 306  Q
    ||||||||||||||| ||||||     |||| || |||||| |||||||||||||||||||| ||||||||||||||||||||||| |||||| ||||||    
T  18579324 agatgttattttaccgaattat-----tcaactattggtttgtttttcattaaagaaaaaattatactttggaagtagtgtatatagtattaattgaagg 18579230  T
Q  307 gtgtaattg 315  Q
    ||| |||||    
T  18579229 gtgcaattg 18579221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 214 - 308
Target Start/End: Original strand, 441228 - 441323
Alignment:
Q  214 attttaccaaattatcctaatcaattactggtttatttttcattaaagaaaaaataatactttggaagtagtgt-atataatattaactgaagggt 308  Q
    ||||||||||||||||||||||||  | |||||| |||||||||||||||||||||||||||||||||| |||| | ||| |||||| ||||||||    
T  441228 attttaccaaattatcctaatcaaccattggtttgtttttcattaaagaaaaaataatactttggaagtggtgtaacatagtattaattgaagggt 441323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 214 - 308
Target Start/End: Complemental strand, 12342249 - 12342154
Alignment:
Q  214 attttaccaaattatcctaatcaattactggtttatttttcattaaagaaaaaataatactttggaagtagtgt-atataatattaactgaagggt 308  Q
    |||||||||||||||||||||||| || || ||| |||||||||||||||||||||||| |||||||||||||| | ||| |||||| ||||||||    
T  12342249 attttaccaaattatcctaatcaactattgatttgtttttcattaaagaaaaaataatattttggaagtagtgtaacatagtattaattgaagggt 12342154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 214 - 288
Target Start/End: Complemental strand, 4133178 - 4133104
Alignment:
Q  214 attttaccaaattatcctaatcaattactggtttatttttcattaaagaaaaaataatactttggaagtagtgta 288  Q
    |||||||||||||||||||||||| || |||||| |||||| |||| ||||||||||||||||||||||||||||    
T  4133178 attttaccaaattatcctaatcaactattggtttgtttttctttaaggaaaaaataatactttggaagtagtgta 4133104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 214 - 288
Target Start/End: Complemental strand, 19636664 - 19636590
Alignment:
Q  214 attttaccaaattatcctaatcaattactggtttatttttcattaaagaaaaaataatactttggaagtagtgta 288  Q
    |||||| ||||||||||||||||| || |||||||||||||||||||||||||||||||||||| || |||||||    
T  19636664 attttatcaaattatcctaatcaactattggtttatttttcattaaagaaaaaataatactttgaaaatagtgta 19636590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 214 - 288
Target Start/End: Complemental strand, 19835257 - 19835183
Alignment:
Q  214 attttaccaaattatcctaatcaattactggtttatttttcattaaagaaaaaataatactttggaagtagtgta 288  Q
    |||||| ||||||||||||||||| || |||||||||||||||||||||||||||||||||||| || |||||||    
T  19835257 attttatcaaattatcctaatcaactattggtttatttttcattaaagaaaaaataatactttgaaaatagtgta 19835183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 131 - 274
Target Start/End: Original strand, 27964140 - 27964282
Alignment:
Q  131 tactccctccgtttcaaaatgaatatcgtttaagatttttacacacatattaagaaatgcattaattnnnnnnng--aagatgttattttaccaaattat 228  Q
    |||||||||| ||||||| ||||| | |||||||||||| |||||||||  ||||||||||||||||          |||||||||||||||||||||||    
T  27964140 tactccctccatttcaaattgaatgttgtttaagatttt-acacacata--aagaaatgcattaattaaaagaaagaaagatgttattttaccaaattat 27964236  T
Q  229 cctaatcaattactggtttatttttcattaaagaaaaaataatact 274  Q
      ||||||| || |||||| ||||||||||||||||||||||||||    
T  27964237 tttaatcaactattggtttgtttttcattaaagaaaaaataatact 27964282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 131 - 285
Target Start/End: Original strand, 15083081 - 15083230
Alignment:
Q  131 tactccctccgtttcaaaatgaatatcgtttaagatttttacacacatattaagaaatgcattaattnnnnnnngaagatgttattttaccaaattatcc 230  Q
    |||||| ||||||| ||||||||| |  |||||  |||||||||| ||||||| |||||||||||||        ||||||||||||||||||||||||     
T  15083081 tactccatccgttttaaaatgaatgttatttaaagtttttacacatatattaataaatgcattaattaaaaga--aagatgttattttaccaaattatca 15083178  T
Q  231 taatcaattactggtttatttttcattaaag-aaaaaataatactttggaagtagt 285  Q
    ||||||||||    || |||||||||||||| ||||||||||||||| ||||||||    
T  15083179 taatcaatta----ttgatttttcattaaagaaaaaaataatactttagaagtagt 15083230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 212 - 304
Target Start/End: Original strand, 12565976 - 12566068
Alignment:
Q  212 ttattttaccaaattatcctaatcaattactggtttatttttcattaaagaaaaaataatactttggaagtagtgtatataatattaactgaa 304  Q
    |||||||||||||||||| || ||||| | || ||| |||||||||||||| ||||| |||||||||||| ||||||||||||||||| ||||    
T  12565976 ttattttaccaaattatcttactcaatcattgatttgtttttcattaaagacaaaattatactttggaagcagtgtatataatattaattgaa 12566068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 214 - 308
Target Start/End: Original strand, 12393916 - 12394013
Alignment:
Q  214 attttaccaaattatcctaatcaattactggtttatttttcattaaagaaaaaataatactttggaagtagtgtat---ataatattaactgaagggt 308  Q
    |||||||||||||||||||||||| || | |||| ||||||||||||||||||||| ||||||| || ||||||||   |||||||||| ||||||||    
T  12393916 attttaccaaattatcctaatcaactattagtttgtttttcattaaagaaaaaatattactttgaaaatagtgtataacataatattaattgaagggt 12394013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 214 - 308
Target Start/End: Complemental strand, 13562150 - 13562055
Alignment:
Q  214 attttaccaaattatcctaatcaattactggtttatttttcattaaagaaaaaataatactttggaagtagtgt-atataatattaactgaagggt 308  Q
    ||||||| ||||||||||||||||  | |||||| |||||||||||| |||||||||||||||||||||||||| | |||| ||||| ||||||||    
T  13562150 attttactaaattatcctaatcaaccattggtttgtttttcattaaataaaaaataatactttggaagtagtgtaacataacattaattgaagggt 13562055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 214 - 308
Target Start/End: Original strand, 32228008 - 32228103
Alignment:
Q  214 attttaccaaattatcctaatcaattactggtttatttttcattaaagaaaaaataatactttggaagtagtgt-atataatattaactgaagggt 308  Q
    |||||||||||||||||||||||| || ||| || ||||||||||||||||||||||||||||| ||||| ||| | ||| |||||| ||||||||    
T  32228008 attttaccaaattatcctaatcaactattgggttgtttttcattaaagaaaaaataatactttgaaagtattgtaacatagtattaattgaagggt 32228103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 212 - 283
Target Start/End: Complemental strand, 43971646 - 43971575
Alignment:
Q  212 ttattttaccaaattatcctaatcaattactggtttatttttcattaaagaaaaaataatactttggaagta 283  Q
    |||||||||| ||||||||||||||| || |||||| |||||||||||||||||||||||||||| ||||||    
T  43971646 ttattttaccgaattatcctaatcaactattggtttgtttttcattaaagaaaaaataatactttagaagta 43971575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 217 - 299
Target Start/End: Original strand, 43480870 - 43480952
Alignment:
Q  217 ttaccaaattatcctaatcaattactggtttatttttcattaaagaaaaaataatactttggaagtagtgtatataatattaa 299  Q
    |||| ||||||||||||| || || |||||| |||||||||||||||||||||||||||||||||| ||||||| | ||||||    
T  43480870 ttactaaattatcctaataaactattggtttgtttttcattaaagaaaaaataatactttggaagttgtgtataaagtattaa 43480952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 214 - 306
Target Start/End: Complemental strand, 42743184 - 42743092
Alignment:
Q  214 attttaccaaattatcctaatcaattactggtttatttttcattaaagaaaaaataatactttggaagtagtgt-atataatattaactgaagg 306  Q
    ||||||||||||||||||||||||||| || ||| ||||| ||||||||||||| ||||||||| ||||||||| | |||||||||| ||||||    
T  42743184 attttaccaaattatcctaatcaattattgatttgttttttattaaagaaaaaa-aatactttgaaagtagtgtaacataatattaattgaagg 42743092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 131 - 196
Target Start/End: Complemental strand, 43972016 - 43971951
Alignment:
Q  131 tactccctccgtttcaaaatgaatatcgtttaagatttttacacacatattaagaaatgcattaat 196  Q
    ||||||||| |||||||||||||| |||| |||| |||||||||||||||||||||||||||||||    
T  43972016 tactccctctgtttcaaaatgaatgtcgtctaaggtttttacacacatattaagaaatgcattaat 43971951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 214 - 304
Target Start/End: Original strand, 6220401 - 6220492
Alignment:
Q  214 attttaccaaattatcctaatcaattactggtttatttttcattaaagaaaaaataatactttggaagtagtgt-atataatattaactgaa 304  Q
    |||||| ||||||||||||||||| || |||||| |||||||||||| | ||||||||| |||||||||||||| | |||||||||| ||||    
T  6220401 attttatcaaattatcctaatcaactattggtttgtttttcattaaaaagaaaataataatttggaagtagtgtaacataatattaattgaa 6220492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 129 - 242
Target Start/End: Complemental strand, 29412226 - 29412111
Alignment:
Q  129 tatactccctccgtttcaaaatgaatatcgtttaagatttttacacacatattaagaaatgcattaattnnnnnnngaagat--gttattttaccaaatt 226  Q
    |||||||||||| ||||||||| ||| ||||||||| |||||||||  |||||||||||||||||||||         ||||  ||||||||||||||||    
T  29412226 tatactccctccatttcaaaattaatgtcgtttaaggtttttacacgtatattaagaaatgcattaattaaaaggaagagataagttattttaccaaatt 29412127  T
Q  227 atcctaatcaattact 242  Q
    ||||||||||| ||||    
T  29412126 atcctaatcaactact 29412111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 214 - 288
Target Start/End: Complemental strand, 30855261 - 30855186
Alignment:
Q  214 attttaccaaattatcctaatcaattactggtttatttttcattaaagaa-aaaataatactttggaagtagtgta 288  Q
    |||||||||||||||||||||||| || |||||| ||||||||||||||| ||||||||  |||||||||||||||    
T  30855261 attttaccaaattatcctaatcaactattggtttgtttttcattaaagaaaaaaataatgttttggaagtagtgta 30855186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 212 - 299
Target Start/End: Original strand, 40608601 - 40608688
Alignment:
Q  212 ttattttaccaaattatcctaatcaattactggtttatttttcattaaagaaaaaataatactttggaagtagtgtatataatattaa 299  Q
    |||||||||||||||||||||||||| ||   |||| |||||||||||||||||||||||| |||   |||||||||||||| |||||    
T  40608601 ttattttaccaaattatcctaatcaactataagtttgtttttcattaaagaaaaaataatattttaatagtagtgtatataagattaa 40608688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 222 - 304
Target Start/End: Complemental strand, 19469673 - 19469589
Alignment:
Q  222 aaattatcctaatcaattactggtttatttttcattaaagaaaaaa--taatactttggaagtagtgtatataatattaactgaa 304  Q
    |||||||| |||||||||| || ||| |||||||||||||||||||  ||||||||||||| || ||||||||||||||| ||||    
T  19469673 aaattatcgtaatcaattattgatttgtttttcattaaagaaaaaaaataatactttggaactaatgtatataatattaattgaa 19469589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 214 - 306
Target Start/End: Original strand, 25383482 - 25383575
Alignment:
Q  214 attttaccaaattatcctaatcaattactggtttatttttcattaaagaaaaaataatactttggaagtagtgt-atataatattaactgaagg 306  Q
    |||||||||||||||| ||||||| || || ||| |||||||||||||||| | |||||||||| ||||||||| | |||||||||| ||||||    
T  25383482 attttaccaaattatcttaatcaactattgatttgtttttcattaaagaaatagtaatactttgaaagtagtgtaacataatattaattgaagg 25383575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 207 - 268
Target Start/End: Complemental strand, 34455854 - 34455793
Alignment:
Q  207 agatgttattttaccaaattatcctaatcaattactggtttatttttcattaaagaaaaaat 268  Q
    ||||||| ||||||||||||||||||||||| |||||||||| |||| ||||||||||||||    
T  34455854 agatgttcttttaccaaattatcctaatcaactactggtttaatttttattaaagaaaaaat 34455793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 214 - 310
Target Start/End: Original strand, 36106400 - 36106497
Alignment:
Q  214 attttaccaaattatcctaatcaattactggtttatttttcattaaagaaaaaataatactttggaagtagtgt-atataatattaactgaagggtgt 310  Q
    |||||||||||||||| ||||||| || ||| || ||||| |||||| |||||||||||| ||||||||||||| | ||| |||||| ||||||||||    
T  36106400 attttaccaaattatcttaatcaactattggattgttttttattaaaaaaaaaataatacattggaagtagtgtaacatagtattaattgaagggtgt 36106497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 131 - 191
Target Start/End: Original strand, 681679 - 681739
Alignment:
Q  131 tactccctccgtttcaaaatgaatatcgtttaagatttttacacacatattaagaaatgca 191  Q
    |||||||||||||||||||||| | ||||||||| ||||| ||||||||||||||||||||    
T  681679 tactccctccgtttcaaaatgagtgtcgtttaaggtttttgcacacatattaagaaatgca 681739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 248 - 308
Target Start/End: Original strand, 7028844 - 7028904
Alignment:
Q  248 atttttcattaaagaaaaaataatactttggaagtagtgtatataatattaactgaagggt 308  Q
    |||||| ||||||||||||||||||||||| |||||||||||||| |||||| ||||||||    
T  7028844 attttttattaaagaaaaaataatactttgaaagtagtgtatatagtattaattgaagggt 7028904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 214 - 288
Target Start/End: Original strand, 34546145 - 34546220
Alignment:
Q  214 attttaccaaattatcctaatcaattactggtttatttttcattaaag-aaaaaataatactttggaagtagtgta 288  Q
    |||||| ||||||||||||||||| || || ||| ||||||||||||| |||||||||| ||||||||||||||||    
T  34546145 attttatcaaattatcctaatcaactattgatttgtttttcattaaagaaaaaaataatcctttggaagtagtgta 34546220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 214 - 308
Target Start/End: Complemental strand, 42005046 - 42004952
Alignment:
Q  214 attttaccaaattatcctaatcaattactggtttatttttcattaaagaaaaaataatactttggaagtagtgt-atataatattaactgaagggt 308  Q
    |||| ||||||||||||||||||| || | |||| ||||| |||||| ||| |||||||||||||||||||||| | |||||||||| ||||||||    
T  42005046 atttcaccaaattatcctaatcaactatttgtttgttttt-attaaaaaaacaataatactttggaagtagtgtaacataatattaattgaagggt 42004952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 214 - 288
Target Start/End: Complemental strand, 18717232 - 18717158
Alignment:
Q  214 attttaccaaattatcctaatcaattactggtttatttttcattaaagaaaaaataatactttggaagtagtgta 288  Q
    ||||||| ||||||||||||||||||| |||||| |||||||||||| || |||||| |||||  ||||||||||    
T  18717232 attttacaaaattatcctaatcaattattggtttgtttttcattaaaaaataaataaaactttaaaagtagtgta 18717158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 131 - 189
Target Start/End: Complemental strand, 45423848 - 45423790
Alignment:
Q  131 tactccctccgtttcaaaatgaatatcgtttaagatttttacacacatattaagaaatg 189  Q
    |||||||||| ||| ||||||||| |||||||| |||||||||||||||||||||||||    
T  45423848 tactccctccattttaaaatgaatgtcgtttaaaatttttacacacatattaagaaatg 45423790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 130 - 191
Target Start/End: Complemental strand, 35799457 - 35799396
Alignment:
Q  130 atactccctccgtttcaaaatgaatatcgtttaagatttttacacacatattaagaaatgca 191  Q
    ||||||||||||||| ||||||||| |||||| || | ||||||||||||||||||||||||    
T  35799457 atactccctccgttttaaaatgaatgtcgttttaggtgtttacacacatattaagaaatgca 35799396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 248 - 308
Target Start/End: Original strand, 7042218 - 7042278
Alignment:
Q  248 atttttcattaaagaaaaaataatactttggaagtagtgtatataatattaactgaagggt 308  Q
    |||||| ||||||||||||| ||||||||| |||||||||||||| |||||| ||||||||    
T  7042218 attttttattaaagaaaaaagaatactttgaaagtagtgtatatagtattaattgaagggt 7042278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 131 - 191
Target Start/End: Original strand, 17695748 - 17695808
Alignment:
Q  131 tactccctccgtttcaaaatgaatatcgtttaagatttttacacacatattaagaaatgca 191  Q
    ||||| |||||||||||||||| | |||||| |||| ||||||||||||||||||||||||    
T  17695748 tactctctccgtttcaaaatgagtgtcgttttagatgtttacacacatattaagaaatgca 17695808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 209 - 305
Target Start/End: Original strand, 33482222 - 33482318
Alignment:
Q  209 atgttattttaccaaattatcctaatcaattactggtttatttttcattaaagaaaaaataatactttggaagtagtgtatataatattaactgaag 305  Q
    ||||||| |||||||||||||||| |||| |  |||||| ||||| ||||| |||||| ||||||||| ||| || |||||||| |||||| |||||    
T  33482222 atgttatcttaccaaattatcctattcaacttttggtttgttttttattaaggaaaaattaatactttcgaaataatgtatatattattaattgaag 33482318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 131 - 237
Target Start/End: Original strand, 9391505 - 9391614
Alignment:
Q  131 tactccctccgtttcaaaatgaatatcgtttaagatttttacacacatattaagaaatgcattaattnnnnnnngaag---atgttattttaccaaatta 227  Q
    |||||| || |||||||||| ||| || ||||||||||||||||||||||||| ||||| |||||||        ||    |||||||||||||||||||    
T  9391505 tactccatcagtttcaaaataaatgtcatttaagatttttacacacatattaaaaaatgtattaattaaaaaaaaaaagatatgttattttaccaaatta 9391604  T
Q  228 tcctaatcaa 237  Q
    ||||||||||    
T  9391605 tcctaatcaa 9391614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #56
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 214 - 288
Target Start/End: Original strand, 16807514 - 16807588
Alignment:
Q  214 attttaccaaattatcctaatcaattactggtttatttttcattaaagaaaaaataatactttggaagtagtgta 288  Q
    |||||| |||||||| |||||||| || | |||| ||||||||||||||||| ||||| |||||||||| |||||    
T  16807514 attttatcaaattattctaatcaactatttgtttgtttttcattaaagaaaatataattctttggaagtggtgta 16807588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #57
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 214 - 288
Target Start/End: Original strand, 16846795 - 16846869
Alignment:
Q  214 attttaccaaattatcctaatcaattactggtttatttttcattaaagaaaaaataatactttggaagtagtgta 288  Q
    |||||| |||||||| |||||||| || | |||| ||||||||||||||||| ||||| |||||||||| |||||    
T  16846795 attttatcaaattattctaatcaactatttgtttgtttttcattaaagaaaatataattctttggaagtggtgta 16846869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #58
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 242 - 308
Target Start/End: Complemental strand, 29411823 - 29411757
Alignment:
Q  242 tggtttatttttcattaaagaaaaaataatactttggaagtagtgtatataatattaactgaagggt 308  Q
    |||||| |||||| ||| ||||||||||||| |||| ||||| ||||||||||||||| ||||||||    
T  29411823 tggtttgtttttccttagagaaaaaataatattttgaaagtaatgtatataatattaattgaagggt 29411757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #59
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 140 - 197
Target Start/End: Original strand, 12565392 - 12565449
Alignment:
Q  140 cgtttcaaaatgaatatcgtttaagatttttacacacatattaagaaatgcattaatt 197  Q
    ||||| ||||||||| ||||||||| |||||||||||||||||| |||||| ||||||    
T  12565392 cgttttaaaatgaatgtcgtttaaggtttttacacacatattaataaatgcgttaatt 12565449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #60
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 128 - 188
Target Start/End: Original strand, 1198659 - 1198719
Alignment:
Q  128 atatactccctccgtttcaaaatgaatatcgtttaagatttttacacacatattaagaaat 188  Q
    ||||||| ||||| ||| ||||||||||| |||||||||||||||||| | ||||||||||    
T  1198659 atatacttcctcctttttaaaatgaatattgtttaagatttttacacataaattaagaaat 1198719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #61
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 214 - 288
Target Start/End: Complemental strand, 42753903 - 42753828
Alignment:
Q  214 attttaccaaattatcctaatcaattactggtttatttttcattaaagaaaa-aataatactttggaagtagtgta 288  Q
    |||||||||||| ||||||||||| || || ||| |||||| ||||| |||| |||| ||||||||||||||||||    
T  42753903 attttaccaaatcatcctaatcaactattgatttgtttttctttaaaaaaaataatagtactttggaagtagtgta 42753828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #62
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 129 - 191
Target Start/End: Original strand, 22620255 - 22620317
Alignment:
Q  129 tatactccctccgtttcaaaatgaatatcgtttaagatttttacacacatattaagaaatgca 191  Q
    |||||| ||||| ||||||||||| | |||||| |||| |||||||||||||||| |||||||    
T  22620255 tatacttcctccatttcaaaatgagtgtcgttttagatgtttacacacatattaaaaaatgca 22620317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #63
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 141 - 195
Target Start/End: Original strand, 32879811 - 32879864
Alignment:
Q  141 gtttcaaaatgaatatcgtttaagatttttacacacatattaagaaatgcattaa 195  Q
    |||||||||||| | |||||||||||||||||||||| || ||||||||||||||    
T  32879811 gtttcaaaatga-tgtcgtttaagatttttacacacaaatcaagaaatgcattaa 32879864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #64
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 137 - 191
Target Start/End: Original strand, 43427217 - 43427271
Alignment:
Q  137 ctccgtttcaaaatgaatatcgtttaagatttttacacacatattaagaaatgca 191  Q
    |||||||||||||||| | |||||| || | ||||||||||||||||||||||||    
T  43427217 ctccgtttcaaaatgagtgtcgttttaggtctttacacacatattaagaaatgca 43427271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #65
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 128 - 197
Target Start/End: Complemental strand, 45301996 - 45301927
Alignment:
Q  128 atatactccctccgtttcaaaatgaatatcgtttaagatttttacacacatattaagaaatgcattaatt 197  Q
    ||||||||| ||||||||||||||| |||  ||| || | |||||||||||||||| ||||||| |||||    
T  45301996 atatactccatccgtttcaaaatgagtattattttaggtctttacacacatattaataaatgcaataatt 45301927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #66
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 157 - 197
Target Start/End: Original strand, 44712172 - 44712212
Alignment:
Q  157 cgtttaagatttttacacacatattaagaaatgcattaatt 197  Q
    ||||||||||||||||||||||||||| |||| ||||||||    
T  44712172 cgtttaagatttttacacacatattaaaaaatacattaatt 44712212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #67
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 128 - 197
Target Start/End: Original strand, 14833668 - 14833738
Alignment:
Q  128 atatactccctccgtttcaaaatgaatatcgtttaagattttt-acacacatattaagaaatgcattaatt 197  Q
    ||||||| ||| |||||| |||||||| ||||||||| ||||| ||| | |||||||||||||||| ||||    
T  14833668 atatacttccttcgtttcgaaatgaatgtcgtttaaggttttttacatatatattaagaaatgcatcaatt 14833738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #68
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 124 - 161
Target Start/End: Original strand, 8774003 - 8774040
Alignment:
Q  124 aatcatatactccctccgtttcaaaatgaatatcgttt 161  Q
    ||||||||||| ||||||||||||||||||||| ||||    
T  8774003 aatcatatactacctccgtttcaaaatgaatattgttt 8774040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #69
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 124 - 161
Target Start/End: Complemental strand, 8789632 - 8789595
Alignment:
Q  124 aatcatatactccctccgtttcaaaatgaatatcgttt 161  Q
    ||||||||||| ||||||||||||||||||||| ||||    
T  8789632 aatcatatacttcctccgtttcaaaatgaatattgttt 8789595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #70
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 157 - 197
Target Start/End: Complemental strand, 777924 - 777884
Alignment:
Q  157 cgtttaagatttttacacacatattaagaaatgcattaatt 197  Q
    |||||||  ||||||| ||||||||||||||||||||||||    
T  777924 cgtttaaagtttttacgcacatattaagaaatgcattaatt 777884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #71
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 131 - 191
Target Start/End: Complemental strand, 14286160 - 14286100
Alignment:
Q  131 tactccctccgtttcaaaatgaatatcgtttaagatttttacacacatattaagaaatgca 191  Q
    |||| ||||||||| ||||||| | |||||| ||   ||||||||||||||||||||||||    
T  14286160 tacttcctccgttttaaaatgagtgtcgttttaggagtttacacacatattaagaaatgca 14286100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #72
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 137 - 189
Target Start/End: Original strand, 32022829 - 32022881
Alignment:
Q  137 ctccgtttcaaaatgaatatcgtttaagatttttacacacatattaagaaatg 189  Q
    |||| ||||||||||| | |||||| || | ||||||||||||||||||||||    
T  32022829 ctccatttcaaaatgagtgtcgttttaggtctttacacacatattaagaaatg 32022881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #73
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 270 - 306
Target Start/End: Complemental strand, 32254681 - 32254645
Alignment:
Q  270 atactttggaagtagtgtatataatattaactgaagg 306  Q
    |||||||| ||||||||||||||||||||| ||||||    
T  32254681 atactttgtaagtagtgtatataatattaattgaagg 32254645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 104; Significance: 8e-52; HSPs: 71)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 104; E-Value: 8e-52
Query Start/End: Original strand, 131 - 308
Target Start/End: Complemental strand, 29568136 - 29567957
Alignment:
Q  131 tactccctccgtttcaaaatgaatatcgtttaagatttttacacacatattaagaaatgcattaattnnnnnnng--aagatgttattttaccaaattat 228  Q
    |||||| ||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||          || ||||||||||||||||||||    
T  29568136 tactccatccgtttcaaaatgaatgtcgtttaaggtttttacacacatattaagaaatgcattaattaaaagaaagaaatatgttattttaccaaattat 29568037  T
Q  229 cctaatcaattactggtttatttttcattaaagaaaaaataatactttggaagtagtgtatataatattaactgaagggt 308  Q
     |||||||| || |||||| |||||||||||||||||||||||||||||||||||||||||||| |||||| ||||||||    
T  29568036 tctaatcaactattggtttgtttttcattaaagaaaaaataatactttggaagtagtgtatatagtattaattgaagggt 29567957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 99; E-Value: 7e-49
Query Start/End: Original strand, 131 - 304
Target Start/End: Original strand, 26594980 - 26595155
Alignment:
Q  131 tactccctccgtttcaaaatgaatatcgtttaagatttttacacacatattaagaaatgcattaattnnnnnnn-ga-agatgttattttaccaaattat 228  Q
    |||||||||||||||||||||||| ||||||||| ||||||||||||||||||||||| ||||||||        || ||||||||||||||||||||||    
T  26594980 tactccctccgtttcaaaatgaatgtcgtttaaggtttttacacacatattaagaaatacattaattaaaagaaagagagatgttattttaccaaattat 26595079  T
Q  229 cctaatcaattactggtttatttttcattaaagaaaaaataatactttggaagtagtgtatataatattaactgaa 304  Q
    |||||||||||| |||||| |||||||||||||||||| |||| |||||||| ||||||||||| |||||| ||||    
T  26595080 cctaatcaattattggtttgtttttcattaaagaaaaattaattctttggaaatagtgtatatagtattaattgaa 26595155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 138 - 309
Target Start/End: Original strand, 18794460 - 18794633
Alignment:
Q  138 tccgtttcaaaatgaatatcgtttaagatttttacacacatattaagaaatgcattaattnnnnnnng--aagatgttattttaccaaattatcctaatc 235  Q
    ||||||| ||||||||| |||||||| ||||||||||||||||||| |||||||||||||          || |||||||||||||||||||| ||||||    
T  18794460 tccgttttaaaatgaatgtcgtttaatatttttacacacatattaataaatgcattaattaaaagaaagaaatatgttattttaccaaattattctaatc 18794559  T
Q  236 aattactggtttatttttcattaaagaaaaaataatactttggaagtagtgtatataatattaactgaagggtg 309  Q
    || || | |||| |||| |||||||||||||| |||| |||||||||||||||||||||||||| |||||||||    
T  18794560 aactattagtttgttttccattaaagaaaaaagaatattttggaagtagtgtatataatattaattgaagggtg 18794633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 138 - 308
Target Start/End: Original strand, 8894933 - 8895105
Alignment:
Q  138 tccgtttcaaaatgaatatcgtttaagatttttacacacatattaagaaatgcattaattnnnnnnn-ga-agatgttattttaccaaattatcctaatc 235  Q
    ||||||| ||||||| | |||||||||||||||| | |||||||||||||||||||||||        || |||||||||||||||||||||||||||||    
T  8894933 tccgttttaaaatgagtgtcgtttaagatttttatatacatattaagaaatgcattaattaaaagaaagagagatgttattttaccaaattatcctaatc 8895032  T
Q  236 aattactggtttatttttcattaaagaaaaaataatactttggaagtagtgtatataatattaactgaagggt 308  Q
    || || || ||| |||||||||||| ||||||||||| |||| || |||||||||||||||||| ||||||||    
T  8895033 aactattgatttgtttttcattaaaaaaaaaataatattttgaaaatagtgtatataatattaattgaagggt 8895105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 131 - 315
Target Start/End: Original strand, 25560783 - 25560969
Alignment:
Q  131 tactccctccgtttcaaaatgaatatcgtttaagatttttacacacatattaagaaatgcattaattnnnnnnn-ga-agatgttattttaccaaattat 228  Q
    |||||||||  ||||||||||||| |||||||   |||||||||| |||||||||||| ||||||||        || ||||||||||||||||||||||    
T  25560783 tactccctctatttcaaaatgaatgtcgtttagagtttttacacatatattaagaaatacattaattaaaagaaagagagatgttattttaccaaattat 25560882  T
Q  229 cctaatcaattactggtttatttttcattaaagaaaaaataatactttggaagtagtgtatataatattaactgaagggtgtaattg 315  Q
    | ||||||| || | |||| |||||||||||||||||||||||| ||||||||||||||||||| |||||| |||| ||| ||||||    
T  25560883 cataatcaactattagtttgtttttcattaaagaaaaaataatattttggaagtagtgtatatagtattaattgaaaggtataattg 25560969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 209 - 304
Target Start/End: Complemental strand, 27209149 - 27209054
Alignment:
Q  209 atgttattttaccaaattatcctaatcaattactggtttatttttcattaaagaaaaaataatactttggaagtagtgtatataatattaactgaa 304  Q
    ||||||||||||||||||||||||||||| || || ||| ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  27209149 atgttattttaccaaattatcctaatcaactattgatttgtttttcattaaagaaaaaataatactttggaagtagtgtatataatattaattgaa 27209054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 146 - 304
Target Start/End: Original strand, 2610762 - 2610916
Alignment:
Q  146 aaaatgaatatcgtttaagatttttacacacatattaagaaatgcattaattnnnnnnngaagatgttattttaccaaattatcctaatcaattactggt 245  Q
    ||||||||| ||||||||  |||||| |||||||||||||||| ||||||||        ||  |||||||||||||| |||||||||||||||  ||||    
T  2610762 aaaatgaatgtcgtttaaagtttttatacacatattaagaaattcattaattaaaaaataaa--tgttattttaccaagttatcctaatcaattgttggt 2610859  T
Q  246 ttatttttcattaaagaaaaaataatactttggaagtagtgtatataatattaactgaa 304  Q
    ||||||||||||||  ||||||||||||||||||||||||||||| |||||||| ||||    
T  2610860 ttatttttcattaa--aaaaaataatactttggaagtagtgtatagaatattaattgaa 2610916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 138 - 285
Target Start/End: Original strand, 5225747 - 5225892
Alignment:
Q  138 tccgtttcaaaatgaatatcgtttaagatttttacacacatattaagaaatgcattaattnnnnnnngaagatgttattttaccaaattatcctaatcaa 237  Q
    ||||||||||||| ||||||||||||| ||||||| |||||||||||||||  |||||||         ||| ||||||||||||||||||| |||| ||    
T  5225747 tccgtttcaaaattaatatcgtttaaggtttttacgcacatattaagaaatatattaattaaaagag--agaagttattttaccaaattatcataattaa 5225844  T
Q  238 ttactggtttatttttcattaaagaaaaaataatactttggaagtagt 285  Q
     || ||||||||||||||||||||||||| ||||||||||||||||||    
T  5225845 ctattggtttatttttcattaaagaaaaagtaatactttggaagtagt 5225892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 131 - 304
Target Start/End: Complemental strand, 5218 - 5044
Alignment:
Q  131 tactccctccgtttcaaaatgaatatcgtttaagatttttacacacatattaagaaatgcattaattnnnnnnn-ga-agatgttattttaccaaattat 228  Q
    |||||||||||||| ||||||||| || ||| || ||||||||||||| |||| |||||||||||||        || ||||||||||||||||||||||    
T  5218 tactccctccgttttaaaatgaatgtcatttgaggtttttacacacat-ttaataaatgcattaatttaaagaaagatagatgttattttaccaaattat 5120  T
Q  229 cctaatcaattactggtttatttttcattaaagaaaaaataatactttggaagtagtgtatataatattaactgaa 304  Q
    ||||||||| || |||||| ||||||  | | ||||||||||||||||| ||||||||||||||||||||| ||||    
T  5119 cctaatcaactattggtttgtttttcgctgatgaaaaaataatactttgaaagtagtgtatataatattaattgaa 5044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 130 - 306
Target Start/End: Original strand, 8989549 - 8989727
Alignment:
Q  130 atactccctccgtttcaaaatgaatatcgtttaagatttttacacacatattaagaaatgcattaattnnnnnnng--aagatgttattttaccaaatta 227  Q
    ||||||| ||||| | ||||| ||| ||| ||||  ||||||||||||||||||||||||||||||||          ||||||||||||||||||||||    
T  8989549 atactccatccgtcttaaaataaatgtcgattaaagtttttacacacatattaagaaatgcattaattaaaagaaagaaagatgttattttaccaaatta 8989648  T
Q  228 tcctaatcaattactggtttatttttcattaaagaaaaaataatactttggaagtagtgtatataatattaactgaagg 306  Q
    |  ||||||| || |||||| |||||||||||||||||||||||| |||| | |||||||||| | |||||| ||||||    
T  8989649 ttataatcaactattggtttgtttttcattaaagaaaaaataatattttgaatgtagtgtatagagtattaattgaagg 8989727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 207 - 308
Target Start/End: Original strand, 31699278 - 31699379
Alignment:
Q  207 agatgttattttaccaaattatcctaatcaattactggtttatttttcattaaagaaaaaataatactttggaagtagtgtatataatattaactgaagg 306  Q
    ||||||||||||||||||||||| ||||||| || |||||| |||||||||||||||||||||||| |||||||||| ||| |||| |||||| ||||||    
T  31699278 agatgttattttaccaaattatcataatcaactattggtttgtttttcattaaagaaaaaataatattttggaagtaatgtttatagtattaattgaagg 31699377  T
Q  307 gt 308  Q
    ||    
T  31699378 gt 31699379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 214 - 308
Target Start/End: Original strand, 49468706 - 49468801
Alignment:
Q  214 attttaccaaattatcctaatcaattactggtttatttttcattaaagaaaaaataatactttggaagtagtgt-atataatattaactgaagggt 308  Q
    |||||||||||||||||||||||| || |||||| ||||||||||||||||||||||| ||||||||||||||| ||||| |||||| ||||||||    
T  49468706 attttaccaaattatcctaatcaactattggtttgtttttcattaaagaaaaaataatcctttggaagtagtgtaatatagtattaattgaagggt 49468801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 214 - 308
Target Start/End: Complemental strand, 15823190 - 15823095
Alignment:
Q  214 attttaccaaattatcctaatcaattactggtttatttttcattaaagaaaaaataatactttggaagtagtgt-atataatattaactgaagggt 308  Q
    |||||||||||||||||||||||| || |||||| ||||||||||||||||||||||||||||| ||||||||| | ||| |||||| ||||||||    
T  15823190 attttaccaaattatcctaatcaactaatggtttgtttttcattaaagaaaaaataatactttgaaagtagtgtaacatagtattaattgaagggt 15823095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 207 - 315
Target Start/End: Original strand, 7191195 - 7191304
Alignment:
Q  207 agatgttattttaccaaattatcctaatcaattactggtttatttttcattaaag-aaaaaataatactttggaagtagtgtatataatattaactgaag 305  Q
    ||||||||||||||||||||||||||||||| || | ||||||||||| |||||| ||||||||||| |||  |||||||||||||| |||||| ||||     
T  7191195 agatgttattttaccaaattatcctaatcaactatttgtttatttttcgttaaagaaaaaaataatattttaaaagtagtgtatatagtattaattgaaa 7191294  T
Q  306 ggtgtaattg 315  Q
    ||| ||||||    
T  7191295 ggtataattg 7191304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 207 - 299
Target Start/End: Complemental strand, 28538367 - 28538274
Alignment:
Q  207 agatgttattttaccaaattatcctaatcaattactggtttatttttcattaaagaa-aaaataatactttggaagtagtgtatataatattaa 299  Q
    ||||||||||||||||||||||| ||||||| || |||||||||||||||||||||| |||||||||| ||| || ||||||||||| ||||||    
T  28538367 agatgttattttaccaaattatcataatcaactattggtttatttttcattaaagaaaaaaataatacattgaaaatagtgtatatagtattaa 28538274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 212 - 304
Target Start/End: Original strand, 49900750 - 49900843
Alignment:
Q  212 ttattttaccaaattatcctaatcaattactggtttatttttcattaaag-aaaaaataatactttggaagtagtgtatataatattaactgaa 304  Q
    ||||||||| |||||||||||||||| || ||||||||||||| |||||| |||||||||||||||| |||||||||||||| |||||| ||||    
T  49900750 ttattttactaaattatcctaatcaactattggtttatttttctttaaagaaaaaaataatactttgaaagtagtgtatatattattaattgaa 49900843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 214 - 308
Target Start/End: Original strand, 52125131 - 52125226
Alignment:
Q  214 attttaccaaattatcctaatcaattactggtttatttttcattaaagaaaaaataatactttggaagtagtgt-atataatattaactgaagggt 308  Q
    ||||||||||||||| |||||||| || |||||| |||||||||||| ||||||||||||| |||||||||||| | |||||||||| ||||||||    
T  52125131 attttaccaaattattctaatcaactattggtttgtttttcattaaacaaaaaataatactatggaagtagtgtaacataatattaattgaagggt 52125226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 214 - 288
Target Start/End: Complemental strand, 5463731 - 5463657
Alignment:
Q  214 attttaccaaattatcctaatcaattactggtttatttttcattaaagaaaaaataatactttggaagtagtgta 288  Q
    |||||||||||| ||||||||||| || |||||| |||||||||||||||||||||||| |||||||||||||||    
T  5463731 attttaccaaataatcctaatcaactattggtttgtttttcattaaagaaaaaataatattttggaagtagtgta 5463657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 214 - 288
Target Start/End: Original strand, 32806933 - 32807007
Alignment:
Q  214 attttaccaaattatcctaatcaattactggtttatttttcattaaagaaaaaataatactttggaagtagtgta 288  Q
    |||||||| ||||||||||||||| || |||||| ||||||||||||||||||||||||||||| ||||||||||    
T  32806933 attttaccgaattatcctaatcaactattggtttgtttttcattaaagaaaaaataatactttgaaagtagtgta 32807007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 214 - 288
Target Start/End: Complemental strand, 48009166 - 48009092
Alignment:
Q  214 attttaccaaattatcctaatcaattactggtttatttttcattaaagaaaaaataatactttggaagtagtgta 288  Q
    |||||||||||||||||||||||| || |||||| ||||||| ||||||||||||||||||||||||| ||||||    
T  48009166 attttaccaaattatcctaatcaactattggtttgtttttcaataaagaaaaaataatactttggaagcagtgta 48009092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 215 - 315
Target Start/End: Original strand, 46286814 - 46286915
Alignment:
Q  215 ttttaccaaattatcctaatcaattactggtttatttttcattaaagaaaaaataatactttggaagtagtgt-atataatattaactgaagggtgtaat 313  Q
    ||||||||||||||||||||||| || |||||| |||||||||||||||||||| |||||||  || |||||| ||||| |||||| ||||||||| |||    
T  46286814 ttttaccaaattatcctaatcaactattggtttgtttttcattaaagaaaaaatgatactttaaaaatagtgtaatatagtattaattgaagggtgcaat 46286913  T
Q  314 tg 315  Q
    ||    
T  46286914 tg 46286915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 214 - 288
Target Start/End: Complemental strand, 25151966 - 25151891
Alignment:
Q  214 attttaccaaattatcctaatcaattactggtttattttt-cattaaagaaaaaataatactttggaagtagtgta 288  Q
    ||||||||||||||| |||||||| || |||||| ||||| |||||||||||||||||||||||||||||||||||    
T  25151966 attttaccaaattatactaatcaactattggttttttttttcattaaagaaaaaataatactttggaagtagtgta 25151891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 214 - 288
Target Start/End: Complemental strand, 31798746 - 31798671
Alignment:
Q  214 attttaccaaattatcctaatcaattactggtttatttttcattaaagaa-aaaataatactttggaagtagtgta 288  Q
    |||||||||||||||| ||||||| || |||||| ||||||||||||||| |||||||||||||||||||||||||    
T  31798746 attttaccaaattatcttaatcaactattggtttgtttttcattaaagaaaaaaataatactttggaagtagtgta 31798671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 214 - 308
Target Start/End: Original strand, 48025249 - 48025344
Alignment:
Q  214 attttaccaaattatcctaatcaattactggtttatttttcattaaagaaaaaataatactttggaagtagtgt-atataatattaactgaagggt 308  Q
    ||||||||||||||||||||| || || | |||| |||||| |||||||||||||||||||||||||||||||| | ||| |||||| ||||||||    
T  48025249 attttaccaaattatcctaataaactatttgtttgtttttctttaaagaaaaaataatactttggaagtagtgtaacatagtattaattgaagggt 48025344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 214 - 288
Target Start/End: Complemental strand, 10842936 - 10842862
Alignment:
Q  214 attttaccaaattatcctaatcaattactggtttatttttcattaaagaaaaaataatactttggaagtagtgta 288  Q
    |||||||||||||||| ||||||| || | |||| ||||||||||||||||||||||||||||||||||| ||||    
T  10842936 attttaccaaattatcttaatcaactattagtttgtttttcattaaagaaaaaataatactttggaagtactgta 10842862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 209 - 304
Target Start/End: Original strand, 51244826 - 51244923
Alignment:
Q  209 atgttattttaccaaattatcctaatcaattactggtttatttttcattaaagaa--aaaataatactttggaagtagtgtatataatattaactgaa 304  Q
    |||||||||||| ||||||||||| ||||| | || |||||||||||| ||||||  |||||| ||||||||||||| |||||||| |||||||||||    
T  51244826 atgttattttactaaattatcctagtcaatcattgatttatttttcatcaaagaaataaaatattactttggaagtaatgtatatagtattaactgaa 51244923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 220 - 308
Target Start/End: Complemental strand, 9915593 - 9915504
Alignment:
Q  220 ccaaattatcctaatcaattactggtttatttttcattaaagaaaaaataatactttggaagtagtgt-atataatattaactgaagggt 308  Q
    |||||||||||||||||| || || ||| ||||||||||||||||||||||||||||| ||||||||| | ||| |||||| ||||||||    
T  9915593 ccaaattatcctaatcaactattgatttgtttttcattaaagaaaaaataatactttgcaagtagtgtaacatagtattaattgaagggt 9915504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 214 - 308
Target Start/End: Original strand, 24611514 - 24611610
Alignment:
Q  214 attttaccaaattatcctaatcaattactggtttatttttcattaaag-aaaaaataatactttggaagtagtgt-atataatattaactgaagggt 308  Q
    ||||||| |||||| ||||||||| || |||||| ||||||||||||| |||||||||||||||||||||||||| | ||| |||||| ||||||||    
T  24611514 attttactaaattaccctaatcaactattggtttgtttttcattaaagaaaaaaataatactttggaagtagtgtaacatagtattaattgaagggt 24611610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 221 - 308
Target Start/End: Complemental strand, 34110676 - 34110588
Alignment:
Q  221 caaattatcctaatcaattactggtttatttttcattaaagaaaaaataatactttggaagtagtgt-atataatattaactgaagggt 308  Q
    ||||||||||||||||| || |||||| ||||||||||||||||||||||||||||| |||||| || | |||||| ||| ||||||||    
T  34110676 caaattatcctaatcaactattggtttgtttttcattaaagaaaaaataatactttgaaagtagagtaagataataataattgaagggt 34110588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 249 - 308
Target Start/End: Complemental strand, 46554918 - 46554859
Alignment:
Q  249 tttttcattaaagaaaaaataatactttggaagtagtgtatataatattaactgaagggt 308  Q
    ||||| |||||||||||||||||||||||||||||||||||||| |||||| ||||||||    
T  46554918 ttttttattaaagaaaaaataatactttggaagtagtgtatatagtattaattgaagggt 46554859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 214 - 288
Target Start/End: Original strand, 31491765 - 31491839
Alignment:
Q  214 attttaccaaattatcctaatcaattactggtttatttttcattaaagaaaaaataatactttggaagtagtgta 288  Q
    |||||||||||||||| ||||||| || || ||| |||||||||||||||||||| |||||||| ||||||||||    
T  31491765 attttaccaaattatcataatcaactattgatttgtttttcattaaagaaaaaattatactttgaaagtagtgta 31491839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 214 - 308
Target Start/End: Complemental strand, 44108757 - 44108660
Alignment:
Q  214 attttaccaaattatcctaatcaattactggtttatttttcattaaagaa--aaaataatactttggaagtagtgt-atataatattaactgaagggt 308  Q
    |||||||||||||||||||| ||| || |||||| |||||||||||||||  |||||||||||||||||||| ||| | ||| |||||| ||||||||    
T  44108757 attttaccaaattatcctaaacaactattggtttgtttttcattaaagaaaaaaaataatactttggaagtattgtaacatagtattaattgaagggt 44108660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 123 - 192
Target Start/End: Complemental strand, 14607651 - 14607582
Alignment:
Q  123 aaatcatatactccctccgtttcaaaatgaatatcgtttaagatttttacacacatattaagaaatgcat 192  Q
    |||||||||||||| | | ||| ||||| ||||||||||||||||||||||||||||||| |||||||||    
T  14607651 aaatcatatactccattcattttaaaataaatatcgtttaagatttttacacacatattatgaaatgcat 14607582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 131 - 196
Target Start/End: Original strand, 28410729 - 28410794
Alignment:
Q  131 tactccctccgtttcaaaatgaatatcgtttaagatttttacacacatattaagaaatgcattaat 196  Q
    |||||||||||||||||||||||| ||||||||  || ||||||||||||||||||||||| ||||    
T  28410729 tactccctccgtttcaaaatgaatgtcgtttaaagttgttacacacatattaagaaatgcaataat 28410794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 130 - 191
Target Start/End: Original strand, 44938492 - 44938553
Alignment:
Q  130 atactccctccgtttcaaaatgaatatcgtttaagatttttacacacatattaagaaatgca 191  Q
    ||||| |||| |||||||||||||  ||||||||||||||||||||||||||||||||||||    
T  44938492 atacttcctcagtttcaaaatgaacgtcgtttaagatttttacacacatattaagaaatgca 44938553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 214 - 274
Target Start/End: Original strand, 38530834 - 38530894
Alignment:
Q  214 attttaccaaattatcctaatcaattactggtttatttttcattaaagaaaaaataatact 274  Q
    ||||||| |||||||||||||||| || |||||| ||||||||||||||||||||||||||    
T  38530834 attttactaaattatcctaatcaactattggtttgtttttcattaaagaaaaaataatact 38530894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 137 - 288
Target Start/End: Original strand, 46270940 - 46271093
Alignment:
Q  137 ctccgtttcaaaatgaatatcgtttaagatttttacacacatattaagaaatgcattaattnnnnnnngaaga-tgttattttaccaaattatcctaatc 235  Q
    |||| ||| ||||||||| ||||||||  |||||||| | ||||||| |||||||||||||        || | | ||||||||||| |||||| |||||    
T  46270940 ctcctttttaaaatgaatgtcgtttaacgtttttacataaatattaataaatgcattaattacaaaaaaaaaaatattattttaccagattatcgtaatc 46271039  T
Q  236 aat-tactggtttatttttcattaaagaaaaaataatactttggaagtagtgta 288  Q
    ||  || | |||| |||||||||||||||||||||||||||||||||| |||||    
T  46271040 aacgtattagtttgtttttcattaaagaaaaaataatactttggaagttgtgta 46271093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 214 - 308
Target Start/End: Complemental strand, 50094386 - 50094290
Alignment:
Q  214 attttaccaaattatcctaatcaattactggtttatttttcattaaagaa-aaaataatactttggaagtagtgt-atataatattaactgaagggt 308  Q
    |||||||||||||||||||||||| || ||||||  |||||||||||||| |||| ||||||||| ||||||||| | ||| |||||| ||||||||    
T  50094386 attttaccaaattatcctaatcaactattggtttgcttttcattaaagaaaaaaacaatactttgtaagtagtgtaacatagtattaattgaagggt 50094290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 214 - 308
Target Start/End: Original strand, 52066285 - 52066379
Alignment:
Q  214 attttaccaaattatcctaatcaattactggtttatttttcattaaagaaaaaataatactttggaagtagtgt-atataatattaactgaagggt 308  Q
    |||||||||||||||| ||||||| || || ||| |||||||||||| |||||| ||| ||||| ||||||||| |||||||||||| ||||||||    
T  52066285 attttaccaaattatcttaatcaactattgatttgtttttcattaaacaaaaaaaaat-ctttgaaagtagtgtaatataatattaattgaagggt 52066379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 214 - 308
Target Start/End: Complemental strand, 15573769 - 15573672
Alignment:
Q  214 attttaccaaattatcctaatcaattactggtttatttttcattaaagaa--aaaataatactttggaagtagtgt-atataatattaactgaagggt 308  Q
    ||||||||||||||||||||| |  || |||||| |||||||||||||||  ||||||||| |||||||||||| | | |||||||||| ||||||||    
T  15573769 attttaccaaattatcctaattatctattggtttgtttttcattaaagaaaaaaaataatattttggaagtagtctaacataatattaattgaagggt 15573672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 209 - 308
Target Start/End: Original strand, 16757189 - 16757284
Alignment:
Q  209 atgttattttaccaaattatcctaatcaattactggtttatttttcattaaagaaaaaataatactttggaagtagtgtatataatattaactgaagggt 308  Q
    |||||||||||||||| |||||||||||| || | |||| |||||||    || ||||||||||||||| |||| ||||||||| |||||| ||||||||    
T  16757189 atgttattttaccaaactatcctaatcaactattagtttgtttttca----aggaaaaataatactttgaaagttgtgtatatagtattaattgaagggt 16757284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 131 - 197
Target Start/End: Complemental strand, 27209605 - 27209539
Alignment:
Q  131 tactccctccgtttcaaaatgaatatcgtttaagatttttacacacatattaagaaatgcattaatt 197  Q
    |||||||||| ||||||||||| | | ||||||| |||||||||||||||||| |||||||||||||    
T  27209605 tactccctccatttcaaaatgagtgttgtttaaggtttttacacacatattaaaaaatgcattaatt 27209539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 214 - 288
Target Start/End: Complemental strand, 46046129 - 46046055
Alignment:
Q  214 attttaccaaattatcctaatcaattactggtttatttttcattaaagaaaaaataatactttggaagtagtgta 288  Q
    |||||||||||||||||||||||| || |  |||  |||||||||||||| ||||||||||||| ||||||||||    
T  46046129 attttaccaaattatcctaatcaactattaatttgattttcattaaagaataaataatactttgaaagtagtgta 46046055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 214 - 308
Target Start/End: Complemental strand, 43759488 - 43759393
Alignment:
Q  214 attttaccaaattatcctaatcaattactggtttatttttcattaaagaaaaaataatactttggaagtagtgt-atataatattaactgaagggt 308  Q
    |||||| |||||||||||||| || || || ||  |||||||||||||||||||||| | |||||||||||||| | ||| |||||| ||||||||    
T  43759488 attttatcaaattatcctaattaactattgattggtttttcattaaagaaaaaataacattttggaagtagtgtaacatattattaattgaagggt 43759393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 207 - 289
Target Start/End: Complemental strand, 9092754 - 9092673
Alignment:
Q  207 agatgttattttaccaaattatcctaatcaattactggtttatttttcattaaagaaaaaataatactttggaagtagtgtat 289  Q
    ||||||||||||   ||||||| |||||||| || || ||| ||||||||||||||||||| |||||||| ||||||||||||    
T  9092754 agatgttattttctaaaattattctaatcaaatattgatttgtttttcattaaagaaaaaa-aatacttttgaagtagtgtat 9092673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 131 - 189
Target Start/End: Original strand, 13579424 - 13579482
Alignment:
Q  131 tactccctccgtttcaaaatgaatatcgtttaagatttttacacacatattaagaaatg 189  Q
    ||||||||||| ||||||| |||| ||||||||| || |||||||||||||||||||||    
T  13579424 tactccctccgcttcaaaacgaatgtcgtttaaggttgttacacacatattaagaaatg 13579482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 251 - 308
Target Start/End: Complemental strand, 26755338 - 26755280
Alignment:
Q  251 tttcattaaagaaaaaataatactttggaagtagtgt-atataatattaactgaagggt 308  Q
    ||||||||||||||||||||||||||||||||||||| | ||| |||||| ||||||||    
T  26755338 tttcattaaagaaaaaataatactttggaagtagtgtgacatagtattaattgaagggt 26755280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 244 - 301
Target Start/End: Original strand, 33622390 - 33622448
Alignment:
Q  244 gtttatttttcattaaagaaaaaa-taatactttggaagtagtgtatataatattaact 301  Q
    |||||||||||||||||||||||  ||||||||| ||||||||||| ||||||||||||    
T  33622390 gtttatttttcattaaagaaaaatgtaatactttagaagtagtgtacataatattaact 33622448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 131 - 188
Target Start/End: Original strand, 12484549 - 12484606
Alignment:
Q  131 tactccctccgtttcaaaatgaatatcgtttaagatttttacacacatattaagaaat 188  Q
    ||||||||| ||| ||||||||||  |||||||| |||||||||||||||||||||||    
T  12484549 tactccctctgttacaaaatgaatgccgtttaaggtttttacacacatattaagaaat 12484606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 146 - 261
Target Start/End: Original strand, 44556995 - 44557112
Alignment:
Q  146 aaaatgaatatcgtttaagatttttacacacatattaagaaatgcattaattnnnnnnngaag--atgttattttaccaaattatcctaatcaattactg 243  Q
    ||||||||| ||||||||| |||||| ||||||||||| |||||||||||||         ||  ||||||||||||||||||||| |||| || |  ||    
T  44556995 aaaatgaatgtcgtttaaggtttttatacacatattaaaaaatgcattaattaaaagaaagagaaatgttattttaccaaattatcttaataaactgttg 44557094  T
Q  244 gtttatttttcattaaag 261  Q
    |||| |||||||||||||    
T  44557095 gtttgtttttcattaaag 44557112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 131 - 191
Target Start/End: Complemental strand, 8565992 - 8565933
Alignment:
Q  131 tactccctccgtttcaaaatgaatatcgtttaagatttttacacacatattaagaaatgca 191  Q
    |||| |||| |||||||||||||| ||||| ||| ||||||||||||||||||||||||||    
T  8565992 tactgcctctgtttcaaaatgaatgtcgtt-aaggtttttacacacatattaagaaatgca 8565933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 214 - 288
Target Start/End: Original strand, 35847931 - 35848002
Alignment:
Q  214 attttaccaaattatcctaatcaattactggtttatttttcattaaagaaaaaataatactttggaagtagtgta 288  Q
    |||||||||||||||| ||||||| || || ||| |||||||   ||||||||||||||||||| ||||||||||    
T  35847931 attttaccaaattatcttaatcaactattgatttgtttttca---aagaaaaaataatactttgaaagtagtgta 35848002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 136 - 188
Target Start/End: Complemental strand, 52707077 - 52707025
Alignment:
Q  136 cctccgtttcaaaatgaatatcgtttaagatttttacacacatattaagaaat 188  Q
    ||||||||| ||||||||  | |||||||||||||||||||||||||||||||    
T  52707077 cctccgttttaaaatgaacgtggtttaagatttttacacacatattaagaaat 52707025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 214 - 288
Target Start/End: Original strand, 1740635 - 1740710
Alignment:
Q  214 attttaccaaattatcctaatcaattactggtttatttttcattaaag-aaaaaataatactttggaagtagtgta 288  Q
    |||||||||||||||| ||||||| || | |||| ||||| ||||||| ||||||||||  |||||||||||||||    
T  1740635 attttaccaaattatcataatcaactattagtttgttttttattaaagaaaaaaataatgttttggaagtagtgta 1740710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 136 - 191
Target Start/End: Original strand, 14373339 - 14373394
Alignment:
Q  136 cctccgtttcaaaatgaatatcgtttaagatttttacacacatattaagaaatgca 191  Q
    ||||||||| ||||||||| |||||| || | ||||||||||||||||||||||||    
T  14373339 cctccgttttaaaatgaatgtcgttttaggtgtttacacacatattaagaaatgca 14373394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 146 - 184
Target Start/End: Complemental strand, 48920449 - 48920411
Alignment:
Q  146 aaaatgaatatcgtttaagatttttacacacatattaag 184  Q
    ||||||||| |||||||||||||||||||||||||||||    
T  48920449 aaaatgaatgtcgtttaagatttttacacacatattaag 48920411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 134 - 191
Target Start/End: Complemental strand, 25487311 - 25487254
Alignment:
Q  134 tccctccgtttcaaaatgaatatcgtttaagatttttacacacatattaagaaatgca 191  Q
    ||||||||||||||||||| | |||||| || | ||||||| ||||||||||||||||    
T  25487311 tccctccgtttcaaaatgagtgtcgttttaggtctttacacgcatattaagaaatgca 25487254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 134 - 191
Target Start/End: Original strand, 34047157 - 34047214
Alignment:
Q  134 tccctccgtttcaaaatgaatatcgtttaagatttttacacacatattaagaaatgca 191  Q
    ||||||||||| ||||||| | |||||| || | ||||||||||||||||||||||||    
T  34047157 tccctccgttttaaaatgagtgtcgttttaggtgtttacacacatattaagaaatgca 34047214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 214 - 288
Target Start/End: Original strand, 49426414 - 49426484
Alignment:
Q  214 attttaccaaattatcctaatcaattactggtttatttttcattaaagaaaaaataatactttggaagtagtgta 288  Q
    |||||||||||||||||||||||| || |||||| || ||||||    |||||| |||| |||||||||||||||    
T  49426414 attttaccaaattatcctaatcaactattggtttgttcttcatt----aaaaaaaaatattttggaagtagtgta 49426484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 131 - 191
Target Start/End: Original strand, 26352002 - 26352062
Alignment:
Q  131 tactccctccgtttcaaaatgaatatcgtttaagatttttacacacatattaagaaatgca 191  Q
    |||||| ||||||| ||||||| | |||||| || | ||||||||||||||||||||||||    
T  26352002 tactccatccgttttaaaatgagtgtcgttttaggtgtttacacacatattaagaaatgca 26352062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 261 - 305
Target Start/End: Original strand, 39477751 - 39477795
Alignment:
Q  261 gaaaaaataatactttggaagtagtgtatataatattaactgaag 305  Q
    ||||||||||||||| |||||||||||||||| |||||| |||||    
T  39477751 gaaaaaataatacttaggaagtagtgtatatagtattaattgaag 39477795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 129 - 161
Target Start/End: Complemental strand, 50591495 - 50591463
Alignment:
Q  129 tatactccctccgtttcaaaatgaatatcgttt 161  Q
    |||||||||||||||||||||||||||||||||    
T  50591495 tatactccctccgtttcaaaatgaatatcgttt 50591463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 131 - 189
Target Start/End: Complemental strand, 6596718 - 6596660
Alignment:
Q  131 tactccctccgtttcaaaatgaatatcgtttaagatttttacacacatattaagaaatg 189  Q
    |||||| | ||||||||||||| | | |||||||||||||| ||||| |||||||||||    
T  6596718 tactccattcgtttcaaaatgagtgttgtttaagatttttagacacaaattaagaaatg 6596660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #64
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 146 - 192
Target Start/End: Original strand, 7190982 - 7191028
Alignment:
Q  146 aaaatgaatatcgtttaagatttttacacacatattaagaaatgcat 192  Q
    ||||||||| |||| |||  |||||||||||||||||||||||||||    
T  7190982 aaaatgaatgtcgtctaatgtttttacacacatattaagaaatgcat 7191028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #65
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 131 - 189
Target Start/End: Complemental strand, 27124158 - 27124100
Alignment:
Q  131 tactccctccgtttcaaaatgaatatcgtttaagatttttacacacatattaagaaatg 189  Q
    |||||| ||||||| ||||||||| | ||||||| |||||||| ||| |||||||||||    
T  27124158 tactccatccgttttaaaatgaatgttgtttaaggtttttacatacaaattaagaaatg 27124100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #66
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 131 - 197
Target Start/End: Complemental strand, 27721303 - 27721237
Alignment:
Q  131 tactccctccgtttcaaaatgaatatcgtttaagatttttacacacatattaagaaatgcattaatt 197  Q
    |||||||||||||| ||||||| | |||||  |||| ||||| |||||||||| ||||||| |||||    
T  27721303 tactccctccgttttaaaatgagtgtcgttgtagatgtttacgcacatattaaaaaatgcaataatt 27721237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #67
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 129 - 191
Target Start/End: Complemental strand, 30293568 - 30293506
Alignment:
Q  129 tatactccctccgtttcaaaatgaatatcgtttaagatttttacacacatattaagaaatgca 191  Q
    |||||||| |||||||||||| || | |||||| || | |||||||| |||||||||||||||    
T  30293568 tatactccatccgtttcaaaacgagtgtcgttttaggtgtttacacatatattaagaaatgca 30293506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #68
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 157 - 191
Target Start/End: Complemental strand, 39125807 - 39125773
Alignment:
Q  157 cgtttaagatttttacacacatattaagaaatgca 191  Q
    |||||||| ||||||||||||||||||||||||||    
T  39125807 cgtttaaggtttttacacacatattaagaaatgca 39125773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #69
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 138 - 187
Target Start/End: Complemental strand, 11799694 - 11799645
Alignment:
Q  138 tccgtttcaaaatgaatatcgtttaagatttttacacacatattaagaaa 187  Q
    ||||||| ||||||||| ||||||||||||||   |||||||||||||||    
T  11799694 tccgttttaaaatgaatgtcgtttaagattttataacacatattaagaaa 11799645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #70
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 130 - 191
Target Start/End: Complemental strand, 50249541 - 50249480
Alignment:
Q  130 atactccctccgtttcaaaatgaatatcgtttaagatttttacacacatattaagaaatgca 191  Q
    ||||| |||| |||||||||||| | | |||| || | ||||||||||||||||||||||||    
T  50249541 atacttcctctgtttcaaaatgagtgttgttttaggtctttacacacatattaagaaatgca 50249480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #71
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 129 - 161
Target Start/End: Original strand, 5463528 - 5463560
Alignment:
Q  129 tatactccctccgtttcaaaatgaatatcgttt 161  Q
    |||||||||||||||||||||||||| ||||||    
T  5463528 tatactccctccgtttcaaaatgaatgtcgttt 5463560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 100; Significance: 2e-49; HSPs: 53)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 129 - 299
Target Start/End: Complemental strand, 11977830 - 11977658
Alignment:
Q  129 tatactccctccgtttcaaaatgaatatcgtttaagatttttacacacatattaagaaatgcattaattnnnnnnn-ga-agatgttattttaccaaatt 226  Q
    |||||||| ||||||||||||||| | ||||||||| ||||||||||||||||||||||||||||||||        || ||||||| ||||||||||||    
T  11977830 tatactccatccgtttcaaaatgagtgtcgtttaagctttttacacacatattaagaaatgcattaattaaaagaaagagagatgttgttttaccaaatt 11977731  T
Q  227 atcctaatcaattactggtttatttttcattaaagaaaaaataatactttggaagtagtgtatataatattaa 299  Q
    ||||||||||| || |||||| || ||||||||||||||||||||||||||||||||||||||||||||||||    
T  11977730 atcctaatcaactattggtttgttgttcattaaagaaaaaataatactttggaagtagtgtatataatattaa 11977658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 130 - 304
Target Start/End: Original strand, 14161811 - 14161988
Alignment:
Q  130 atactccctccgtttcaaaatgaatatcgtttaagattttta-cacacatattaagaaatgcattaattnnnnnnn-gaag-atgttattttaccaaatt 226  Q
    |||||| |||||||||||||||||| ||||||||| |||||  ||||||||||||||||||||||||||        |||| ||||||||||| ||||||    
T  14161811 atactcactccgtttcaaaatgaatgtcgtttaaggttttttgcacacatattaagaaatgcattaattaaaagaaagaaggatgttattttatcaaatt 14161910  T
Q  227 atcctaatcaattactggtttatttttcattaaagaaaaaataatactttggaagtagtgtatataatattaactgaa 304  Q
    ||| ||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| ||||    
T  14161911 atcataaacaactactggtttatttttcattaaagaaaaaataatactttggaagtagtgtatatagtattaattgaa 14161988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 89; E-Value: 7e-43
Query Start/End: Original strand, 130 - 304
Target Start/End: Complemental strand, 843259 - 843083
Alignment:
Q  130 atactccctccgtttcaaaatgaatatcgtttaagatttttacacacatattaagaaatgcattaattnnnnnnngaagat--gttattttaccaaatta 227  Q
    |||||||||||||||||||||||||  |||||||||||| | |||| |||||||||||||||||||||       | ||||  |||||||||||||||||    
T  843259 atactccctccgtttcaaaatgaatgacgtttaagatttctccacaaatattaagaaatgcattaattaaaagaaggagatatgttattttaccaaatta 843160  T
Q  228 tcctaatcaattactggtttatttttcattaaagaaaaaataatactttggaagtagtgtatataatattaactgaa 304  Q
    |||||||||| || |||||| ||| |||||||||||||||||| ||||| ||||||||||||| |||||||| ||||    
T  843159 tcctaatcaactattggtttgtttctcattaaagaaaaaataacacttttgaagtagtgtatacaatattaattgaa 843083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 131 - 304
Target Start/End: Complemental strand, 21634351 - 21634177
Alignment:
Q  131 tactccctccgtttcaaaatgaatatcgtttaagatttttacacacatattaagaaatgcattaattnnnnnnn-ga-agatgttattttaccaaattat 228  Q
    |||||| || |||| ||||||||| ||||||||  ||||||||||||||||||||||||||||||||        || |||||||||||||||||| |||    
T  21634351 tactccatctgttttaaaatgaatgtcgtttaaagtttttacacacatattaagaaatgcattaattaaaataaagagagatgttattttaccaaagtat 21634252  T
Q  229 cctaatcaattactggtttatttttcattaaagaaaaaataatactttggaagtagtgtatataatattaactgaa 304  Q
    | |||||||||| |||||| |||||||||||||| ||||||||| |||||||||||||||||||||||||| ||||    
T  21634251 cataatcaattattggtttgtttttcattaaaga-aaaataatattttggaagtagtgtatataatattaattgaa 21634177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 131 - 304
Target Start/End: Complemental strand, 21642598 - 21642424
Alignment:
Q  131 tactccctccgtttcaaaatgaatatcgtttaagatttttacacacatattaagaaatgcattaattnnnnnnn-ga-agatgttattttaccaaattat 228  Q
    |||||| || |||| ||||||||| ||||||||  ||||||||||||||||||||||||||||||||        || |||||||||||||||||| |||    
T  21642598 tactccatctgttttaaaatgaatgtcgtttaaagtttttacacacatattaagaaatgcattaattaaaataaagagagatgttattttaccaaagtat 21642499  T
Q  229 cctaatcaattactggtttatttttcattaaagaaaaaataatactttggaagtagtgtatataatattaactgaa 304  Q
    | |||||||||| |||||| |||||||||||||| ||||||||| |||||||||||||||||||||||||| ||||    
T  21642498 cataatcaattattggtttgtttttcattaaaga-aaaataatattttggaagtagtgtatataatattaattgaa 21642424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 128 - 308
Target Start/End: Complemental strand, 34534602 - 34534420
Alignment:
Q  128 atatactccctccgtttcaaaatgaatatcgtttaagatttttacacacatattaagaaatgcattaattnnnnnnn-ga-agatgttattttaccaaat 225  Q
    ||||||| | ||||||||||||||||| | |||| || |||||||||||||||||| |||||||||||||        || |||| ||||||||||||||    
T  34534602 atatacttcatccgtttcaaaatgaatgttgtttgaggtttttacacacatattaaaaaatgcattaattaaaagaaagagagatattattttaccaaat 34534503  T
Q  226 tatcctaatcaattactggtttatttttcattaaagaaaaaataatactttggaagtagtgtatataatattaactgaagggt 308  Q
    |||||||||||| || |||||| |||||||||||||||||||||||| ||||||||||||||  ||| |||||| ||||||||    
T  34534502 tatcctaatcaactattggtttgtttttcattaaagaaaaaataatattttggaagtagtgtgcatagtattaattgaagggt 34534420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 131 - 296
Target Start/End: Complemental strand, 7736615 - 7736447
Alignment:
Q  131 tactccctccgtttcaaaatgaatatcgtttaagatttttacacacatattaagaaa-tgcattaattnnnnnnngaagat--gttattttaccaaatta 227  Q
    |||||||||| ||||||||||||| |||||||||||||||||||||||||||| ||| ||||||||||         ||||  |||||||||||| ||||    
T  7736615 tactccctccatttcaaaatgaatgtcgtttaagatttttacacacatattaaaaaaatgcattaattaaaataaagagatatgttattttaccatatta 7736516  T
Q  228 tcctaatcaattactggtttatttttcattaaagaaaaaataatactttggaagtagtgtatataatat 296  Q
    |||||||||| || | |||  ||||||||||||||||||||||||||||| ||||||||||||||||||    
T  7736515 tcctaatcaactattagttcgtttttcattaaagaaaaaataatactttgaaagtagtgtatataatat 7736447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 120 - 304
Target Start/End: Original strand, 1309260 - 1309446
Alignment:
Q  120 agaaaatcatatactccctccgtttcaaaatgaatatcgtttaagatttttacacacatattaagaaatgcattaattnnnnnnngaag--atgttattt 217  Q
    ||||||| || |||||| ||||||||||||||||| || |||||| ||||||||||||||||||||||||||||||||         ||  |||||||||    
T  1309260 agaaaataatttactccatccgtttcaaaatgaatgtcatttaaggtttttacacacatattaagaaatgcattaattaaaagaaatagatatgttattt 1309359  T
Q  218 taccaaattatcctaatcaattactggtttatttttcattaaagaaaaaataatactttggaagtagtgtatataatattaactgaa 304  Q
    || ||||||||| |||||||  | || ||| ||| ||||||||||||||||||||  ||| ||||||||||||||||||||| ||||    
T  1309360 tatcaaattatcataatcaacaattgatttgtttatcattaaagaaaaaataatatgttgtaagtagtgtatataatattaattgaa 1309446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 140 - 304
Target Start/End: Complemental strand, 13974505 - 13974338
Alignment:
Q  140 cgtttcaaaatgaatatcgtttaagatttttacacacatattaagaaatgcattaattnnnnnnngaaga--tgttattttaccaaattatcctaatcaa 237  Q
    ||||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||         |||  ||||||||||||||||||||||||||||    
T  13974505 cgttttaaaatgaatgtcgtttaagatttttacacacatattaagaaatgcattaattaaaagaaagagaggtgttattttaccaaattatcctaatcaa 13974406  T
Q  238 ttactggtttatttttcattaaagaaaaaa-taatactttggaagtagtgtatataatattaactgaa 304  Q
     || | |||| |||| |||||||||||||| ||||| |||||||||||  ||||||||| ||| ||||    
T  13974405 ctatttgtttgttttccattaaagaaaaaagtaatattttggaagtagcatatataataataattgaa 13974338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 141 - 297
Target Start/End: Complemental strand, 7721318 - 7721167
Alignment:
Q  141 gtttcaaaatgaatatcgtttaagatttttacacacatattaagaaatgcattaattnnnnnnngaagatgttattttaccaaattatcctaatcaatta 240  Q
    |||| ||||||||| ||||||||| |||||| ||||||||||| |||||||||||           ||||||||||||| ||||||||||||||||||||    
T  7721318 gttttaaaatgaatgtcgtttaaggtttttatacacatattaataaatgcattaaaaaaag-----agatgttattttaacaaattatcctaatcaatta 7721224  T
Q  241 ctggtttatttttcattaaagaaaaaataatactttggaagtagtgtatataatatt 297  Q
     |||||| ||| || |||||||||||||||||||||| ||||| |||||||||||||    
T  7721223 ttggtttgtttgtctttaaagaaaaaataatactttgaaagtaatgtatataatatt 7721167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 209 - 315
Target Start/End: Complemental strand, 36165047 - 36164941
Alignment:
Q  209 atgttattttaccaaattatcctaatcaattactggtttatttttcattaaagaaaaaataatactttggaagtagtgtatataatattaactgaagggt 308  Q
    ||||||||||||||||||||||||||||| || || ||| ||||| |||||||||||||||||| |||||||||| |||||||| |||||| ||||||||    
T  36165047 atgttattttaccaaattatcctaatcaactattgatttgttttttattaaagaaaaaataatattttggaagtaatgtatatagtattaattgaagggt 36164948  T
Q  309 gtaattg 315  Q
     ||||||    
T  36164947 ataattg 36164941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 140 - 305
Target Start/End: Original strand, 15166934 - 15167100
Alignment:
Q  140 cgtttcaaaatgaatatcgtttaagatttttacacacatattaagaaatgcattaattnnnnnnnga-agatgttattttaccaaattatcctaatcaat 238  Q
    ||||| ||||||||| |||||||| ||||||| ||| ||||||| ||||  |||||||        | ||| |||||||||||||||||||||| ||||     
T  15166934 cgttttaaaatgaatgtcgtttaaaatttttatacatatattaaaaaatatattaattaaagaaatagagacgttattttaccaaattatcctagtcaac 15167033  T
Q  239 tactggtttatttttcattaaagaaaaaataatactttggaagtagtgtatataatattaactgaag 305  Q
    || ||||| ||||||||||||||||||||||||| ||||||||||||||||||| || ||| |||||    
T  15167034 tattggttaatttttcattaaagaaaaaataatattttggaagtagtgtatatagtaataattgaag 15167100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 214 - 308
Target Start/End: Original strand, 34446024 - 34446119
Alignment:
Q  214 attttaccaaattatcctaatcaattactggtttatttttcattaaagaaaaaataatactttggaagtagtgt-atataatattaactgaagggt 308  Q
    |||||||||||||||||||||||| || |||||| ||||||||||||||||||||||||||||||||||||||| | ||| |||||| ||||||||    
T  34446024 attttaccaaattatcctaatcaactattggtttgtttttcattaaagaaaaaataatactttggaagtagtgtaacatagtattaattgaagggt 34446119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 214 - 288
Target Start/End: Original strand, 2729783 - 2729857
Alignment:
Q  214 attttaccaaattatcctaatcaattactggtttatttttcattaaagaaaaaataatactttggaagtagtgta 288  Q
    |||||||||||||||||||||||| || |||||| ||||||||||||||||||||||||||||||||||||||||    
T  2729783 attttaccaaattatcctaatcaactattggtttgtttttcattaaagaaaaaataatactttggaagtagtgta 2729857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 141 - 305
Target Start/End: Complemental strand, 38370102 - 38369936
Alignment:
Q  141 gtttcaaaatgaatatcgtttaagatttttacacacatattaagaaatgcattaattnnnnnnngaagat--gttattttaccaaattatcctaatcaat 238  Q
    |||| ||||||| | | ||||||| |||||||||| ||||||| |||||||||||||         ||||  |||||||||||||||||||||||||||     
T  38370102 gttttaaaatgattgttgtttaaggtttttacacatatattaataaatgcattaattaaaataaagagatatgttattttaccaaattatcctaatcaac 38370003  T
Q  239 tactggtttatttttcattaaagaaaaaataatactttggaagtagtgtatataatattaactgaag 305  Q
    || | |||  |||||||||||  |||||||||||||||| ||||||||||||||||||||| |||||    
T  38370002 tatttgttcgtttttcattaataaaaaaataatactttgaaagtagtgtatataatattaattgaag 38369936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 132 - 292
Target Start/End: Original strand, 4911023 - 4911191
Alignment:
Q  132 actccctccgtttcaaaatgaatatcgtttaagatttttacacacatattaagaaatgcattaattnnnnnnn-ga-agatgttat-----tttaccaaa 224  Q
    ||||| || |||||||||||||| || |||||| ||||||||||||||||||||||| ||||||||        || | |||||||     |||||||||    
T  4911023 actccatctgtttcaaaatgaatgtcatttaaggtttttacacacatattaagaaatacattaattaaaagaaagataaatgttattttattttaccaaa 4911122  T
Q  225 ttatcctaatcaattactggtttatttttcattaaag-aaaaaataatactttggaagtagtgtatata 292  Q
    ||||||||||||| || |||||| ||||||||||||| |||||||||||||||| ||||||||||||||    
T  4911123 ttatcctaatcaactattggtttgtttttcattaaagaaaaaaataatactttgaaagtagtgtatata 4911191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 213 - 288
Target Start/End: Complemental strand, 14006049 - 14005974
Alignment:
Q  213 tattttaccaaattatcctaatcaattactggtttatttttcattaaagaaaaaataatactttggaagtagtgta 288  Q
    ||||||||||||||||||||||||| || |||||| ||||||||||||||||||||||||| ||||||||||||||    
T  14006049 tattttaccaaattatcctaatcaaatattggtttgtttttcattaaagaaaaaataataccttggaagtagtgta 14005974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 146 - 308
Target Start/End: Complemental strand, 27798001 - 27797842
Alignment:
Q  146 aaaatgaatatcgtttaagatttttacacacatattaagaaatgcattaattnnnnnnngaagatgttattttaccaaattatcctaatcaattactggt 245  Q
    ||||| ||| ||||||||  |||||||| ||||||||| |||| ||||||||         | ||||||||||||||||||||| ||||||| || ||||    
T  27798001 aaaataaatgtcgtttaaattttttacatacatattaaaaaatacattaattaaaagaaagaaatgttattttaccaaattatcttaatcaactattggt 27797902  T
Q  246 ttatttttcattaaagaaaaaataatactttggaagtagtgtatataatattaactgaagggt 308  Q
    || |||||||||||||| ||||||||||||||||||||   |||||| |||||||||||||||    
T  27797901 ttgtttttcattaaaga-aaaataatactttggaagta--atatatagtattaactgaagggt 27797842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 214 - 304
Target Start/End: Original strand, 14620491 - 14620582
Alignment:
Q  214 attttaccaaattatcctaatcaattactggtttatttttcattaaagaaaaaataatactttggaagtagtgt-atataatattaactgaa 304  Q
    |||||| ||||||||| |||||||||| |||||| |||||||| |||||||||||||||||||||||||||||| | |||||||||| ||||    
T  14620491 attttatcaaattatcttaatcaattattggtttgtttttcatcaaagaaaaaataatactttggaagtagtgtaacataatattaattgaa 14620582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 214 - 308
Target Start/End: Complemental strand, 39566339 - 39566244
Alignment:
Q  214 attttaccaaattatcctaatcaattactggtttatttttcattaaagaaaaaataatactttggaagtagtgt-atataatattaactgaagggt 308  Q
    |||||||||||||||||||||||| || || ||| |||||||||||||| |||||||||||||||||||||||| | ||| |||||| ||||||||    
T  39566339 attttaccaaattatcctaatcaactattgatttgtttttcattaaagagaaaataatactttggaagtagtgtaacatattattaattgaagggt 39566244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 214 - 308
Target Start/End: Original strand, 42661937 - 42662032
Alignment:
Q  214 attttaccaaattatcctaatcaattactggtttatttttcattaaagaaaaaataatactttggaagtagtgt-atataatattaactgaagggt 308  Q
    |||||||||||||||||||||||| || | |||| ||||| ||||||||||||||||||||||||||||||||| | ||| |||||| ||||||||    
T  42661937 attttaccaaattatcctaatcaactattagtttgttttttattaaagaaaaaataatactttggaagtagtgtaacatagtattaattgaagggt 42662032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 214 - 288
Target Start/End: Original strand, 3306006 - 3306080
Alignment:
Q  214 attttaccaaattatcctaatcaattactggtttatttttcattaaagaaaaaataatactttggaagtagtgta 288  Q
    |||||||||||||||| ||||||| || || ||| ||||||||||||||||||||||||||||||||||||||||    
T  3306006 attttaccaaattatcttaatcaactattgatttgtttttcattaaagaaaaaataatactttggaagtagtgta 3306080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 214 - 288
Target Start/End: Complemental strand, 39730102 - 39730028
Alignment:
Q  214 attttaccaaattatcctaatcaattactggtttatttttcattaaagaaaaaataatactttggaagtagtgta 288  Q
    |||||||||||||||||||||||| || | |||| |||||||||||||||||||||||| |||||||||||||||    
T  39730102 attttaccaaattatcctaatcaactattcgtttgtttttcattaaagaaaaaataatattttggaagtagtgta 39730028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 214 - 288
Target Start/End: Original strand, 42978070 - 42978144
Alignment:
Q  214 attttaccaaattatcctaatcaattactggtttatttttcattaaagaaaaaataatactttggaagtagtgta 288  Q
    |||||||||||||||||||||||| || |||||| |||||||||||||||||||||||||| || ||||||||||    
T  42978070 attttaccaaattatcctaatcaactattggtttgtttttcattaaagaaaaaataatactatgtaagtagtgta 42978144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 210 - 299
Target Start/End: Original strand, 7748891 - 7748980
Alignment:
Q  210 tgttattttaccaaattatcctaatcaattactggtttatttttcattaaagaaaaaataatactttggaagtagtgtatataatattaa 299  Q
    |||||| |||||||||||| ||||| ||||| |||||| ||||||||||||||||||||||||||||| ||||  |||||||| ||||||    
T  7748891 tgttatattaccaaattattctaattaattattggtttgtttttcattaaagaaaaaataatactttgaaagttatgtatatagtattaa 7748980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 214 - 308
Target Start/End: Original strand, 39335200 - 39335296
Alignment:
Q  214 attttaccaaattatcctaatcaattactggtttatttttcattaaag-aaaaaataatactttggaagtagtgt-atataatattaactgaagggt 308  Q
    |||||||||||||||||||||||| || |||||| ||||||||||||| ||||||||| |||||||||||||||| | ||| |||||| ||||||||    
T  39335200 attttaccaaattatcctaatcaactattggtttgtttttcattaaagaaaaaaataacactttggaagtagtgtaacatagtattaattgaagggt 39335296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 214 - 308
Target Start/End: Original strand, 42104060 - 42104155
Alignment:
Q  214 attttaccaaattatcctaatcaattactggtttatttttcattaaagaaaaaataatactttggaagtagtgt-atataatattaactgaagggt 308  Q
    |||||||||||||||||||||||| || ||  || ||||||||||||||||||||||||| ||||||||||||| | ||| |||||| ||||||||    
T  42104060 attttaccaaattatcctaatcaactattgacttgtttttcattaaagaaaaaataataccttggaagtagtgtaacatagtattaattgaagggt 42104155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 141 - 299
Target Start/End: Original strand, 28591547 - 28591709
Alignment:
Q  141 gtttcaaaatgaatatcgtttaagatttttacacacatattaagaaatgcattaattnnnnnnngaagatgttattttaccaaattatcctaatcaat-- 238  Q
    |||| ||||||||| || || ||| |||||||||||||||||| |||| ||||||||         |||||||||||||||||||||||||||| |||      
T  28591547 gttttaaaatgaatgtcattaaagttttttacacacatattaataaatacattaattaaaagaaagagatgttattttaccaaattatcctaattaatca 28591646  T
Q  239 --tactggtttatttttcattaaagaaaaaataatactttggaagtagtgtatataatattaa 299  Q
      || || ||| |||||||||||||||||||||||  |||  || ||||||||||| ||||||    
T  28591647 actattgatttgtttttcattaaagaaaaaataattttttaaaaatagtgtatatagtattaa 28591709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 214 - 304
Target Start/End: Complemental strand, 4425130 - 4425039
Alignment:
Q  214 attttaccaaattatcctaatcaattactggtttatttttcattaaagaaaaaataatactttggaagtagtgt-atataatattaactgaa 304  Q
    |||||||||||||||| ||||||  ||  | ||| ||||||||||||||||||||||||||||||||||||||| ||||| |||||| ||||    
T  4425130 attttaccaaattatcttaatcatctatcgatttgtttttcattaaagaaaaaataatactttggaagtagtgtaatatagtattaattgaa 4425039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 130 - 266
Target Start/End: Original strand, 7579511 - 7579643
Alignment:
Q  130 atactccctccgtttcaaaatgaatatcgtttaagatttttacacacatattaagaaatgcattaattnnnnnnngaagatgttattttaccaaattatc 229  Q
    ||||||| ||| ||| ||||| ||||||||||||| ||||||||||| |||| | |||||||||||||        || ||||||||||  |||||||||    
T  7579511 atactccttccattttaaaataaatatcgtttaaggtttttacacacgtattgataaatgcattaattaaaa----aaaatgttattttttcaaattatc 7579606  T
Q  230 ctaatcaattactggtttatttttcattaaagaaaaa 266  Q
    |||||||| || || ||| ||||||||||||||||||    
T  7579607 ctaatcaactattgatttgtttttcattaaagaaaaa 7579643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 209 - 299
Target Start/End: Original strand, 38362130 - 38362220
Alignment:
Q  209 atgttattttaccaaattatcctaatcaattactggtttatttttcattaaagaaaaaataatactttggaagtagtgtatataatattaa 299  Q
    |||||||||||| ||||||||||||| || || || ||||||||| ||||||||||||||||||||||  ||||||| |||| | ||||||    
T  38362130 atgttattttactaaattatcctaattaactattgttttattttttattaaagaaaaaataatactttaaaagtagtatataaagtattaa 38362220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 214 - 288
Target Start/End: Original strand, 8336404 - 8336480
Alignment:
Q  214 attttaccaaattatcctaatcaattactggtttatttttcattaaag--aaaaaataatactttggaagtagtgta 288  Q
    |||||||||||||||||||||||| || |||||| ||||| |||||||  ||||||||||| |||||||||||||||    
T  8336404 attttaccaaattatcctaatcaactattggtttgttttttattaaagaaaaaaaataatattttggaagtagtgta 8336480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 128 - 242
Target Start/End: Original strand, 34381710 - 34381822
Alignment:
Q  128 atatactccctccgtttcaaaatgaatatcgtttaagatttttacacacatattaagaaatgcattaattnnnnnnngaagatgttattttaccaaatta 227  Q
    ||||||||| | ||||||||||| ||| | ||||||| ||||||||||||||||||||||| |||| |||        |||||||||||||| |||||||    
T  34381710 atatactccgttcgtttcaaaataaatgtagtttaaggtttttacacacatattaagaaatacattgattaaaaaa--aagatgttattttaacaaatta 34381807  T
Q  228 tcctaatcaattact 242  Q
    |||||||||| ||||    
T  34381808 tcctaatcaactact 34381822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 214 - 308
Target Start/End: Complemental strand, 6519133 - 6519037
Alignment:
Q  214 attttaccaaattatcctaatcaattactggtttatttttcattaaagaa-aaaataatactttggaagtagtgt-atataatattaactgaagggt 308  Q
    |||||| ||||||||||||||||| || || ||| ||||||||||||||| |||||||||||||| ||||||||| | ||| |||||| ||||||||    
T  6519133 attttatcaaattatcctaatcaactattgatttgtttttcattaaagaaaaaaataatactttgaaagtagtgtaacatagtattaattgaagggt 6519037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 214 - 288
Target Start/End: Original strand, 29807311 - 29807386
Alignment:
Q  214 attttaccaaattatcctaatcaattactggtttatttttcattaaag-aaaaaataatactttggaagtagtgta 288  Q
    |||||||||||||||||||||||| || |||||| ||||| | ||||| ||||||||||| |||||||||||||||    
T  29807311 attttaccaaattatcctaatcaactattggtttgttttttactaaagaaaaaaataatattttggaagtagtgta 29807386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 130 - 191
Target Start/End: Original strand, 10344854 - 10344915
Alignment:
Q  130 atactccctccgtttcaaaatgaatatcgtttaagatttttacacacatattaagaaatgca 191  Q
    ||||||||||||||||||||||| | |||||| || | ||||||||||||||||||||||||    
T  10344854 atactccctccgtttcaaaatgagtgtcgttttaggtctttacacacatattaagaaatgca 10344915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 214 - 308
Target Start/End: Original strand, 21375647 - 21375743
Alignment:
Q  214 attttaccaaattatcctaatcaattactggtttatttttcattaaag-aaaaaataatactttggaagtagtgt-atataatattaactgaagggt 308  Q
    |||||||||||||||||||||||  || | |||| ||||||||||||| |||||||| ||||||| ||||||||| | ||| |||||| ||||||||    
T  21375647 attttaccaaattatcctaatcacctatttgtttgtttttcattaaagaaaaaaatattactttgaaagtagtgtaacatagtattaattgaagggt 21375743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 214 - 308
Target Start/End: Original strand, 21319309 - 21319402
Alignment:
Q  214 attttaccaaattatcctaatcaattactggtttatttttcattaaagaaaaaataatactttggaagtagtgt-atataatattaactgaagggt 308  Q
    |||||||||||||||||||||||| || |||||| |||||||||||| |||| || ||| ||||| |||||||| | |||||||||| ||||||||    
T  21319309 attttaccaaattatcctaatcaactattggtttgtttttcattaaaaaaaatat-atattttgg-agtagtgtaacataatattaattgaagggt 21319402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 250 - 315
Target Start/End: Original strand, 34208926 - 34208993
Alignment:
Q  250 ttttcattaaagaaaa-aataatactttggaagtagtgt-atataatattaactgaagggtgtaattg 315  Q
    |||||||||||||||| ||||||| |||||||||||||| |||||||||||| |||||||| ||||||    
T  34208926 ttttcattaaagaaaaaaataatattttggaagtagtgtaatataatattaattgaagggtataattg 34208993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 214 - 280
Target Start/End: Original strand, 34972647 - 34972713
Alignment:
Q  214 attttaccaaattatcctaatcaattactggtttatttttcattaaagaaaaaataatactttggaa 280  Q
    |||||||||||||||||||||||| || |  ||| ||||| |||||||||| |||||||||||||||    
T  34972647 attttaccaaattatcctaatcaactattaatttgttttttattaaagaaagaataatactttggaa 34972713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 131 - 188
Target Start/End: Complemental strand, 4631160 - 4631103
Alignment:
Q  131 tactccctccgtttcaaaatgaatatcgtttaagatttttacacacatattaagaaat 188  Q
    |||||||||||||||||||||| | |||||| || | |||||||||||||||||||||    
T  4631160 tactccctccgtttcaaaatgagtgtcgttttaggtgtttacacacatattaagaaat 4631103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 214 - 267
Target Start/End: Complemental strand, 13761876 - 13761823
Alignment:
Q  214 attttaccaaattatcctaatcaattactggtttatttttcattaaagaaaaaa 267  Q
    ||||||| |||||||| ||||||| || ||||||||||||||||||||||||||    
T  13761876 attttacaaaattatcttaatcaactattggtttatttttcattaaagaaaaaa 13761823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 214 - 288
Target Start/End: Complemental strand, 39504881 - 39504805
Alignment:
Q  214 attttaccaaattatcctaatcaattactggtttatttttcattaaagaa--aaaataatactttggaagtagtgta 288  Q
    ||||||||||||||| |||||||| || | |||| ||||||| |||||||  ||||||||| |||||||||||||||    
T  39504881 attttaccaaattattctaatcaactattagtttgtttttcaataaagaaaaaaaataatattttggaagtagtgta 39504805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 214 - 285
Target Start/End: Complemental strand, 26660910 - 26660840
Alignment:
Q  214 attttaccaaattatcctaatcaattactggtttatttttcattaaagaaaaaataatactttggaagtagt 285  Q
    ||||||||||||| || ||||||| || |||||| |||||||||||||| ||||||||||| | ||||||||    
T  26660910 attttaccaaattctcttaatcaactattggtttgtttttcattaaaga-aaaataatactctagaagtagt 26660840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 214 - 285
Target Start/End: Complemental strand, 26932503 - 26932433
Alignment:
Q  214 attttaccaaattatcctaatcaattactggtttatttttcattaaagaaaaaataatactttggaagtagt 285  Q
    ||||||||||||| || ||||||| || |||||| |||||||||||||| ||||||||||| | ||||||||    
T  26932503 attttaccaaattctcttaatcaactattggtttgtttttcattaaaga-aaaataatactctagaagtagt 26932433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 213 - 308
Target Start/End: Complemental strand, 41645392 - 41645301
Alignment:
Q  213 tattttaccaaattatcctaatcaattactggtttatttttcattaaagaaaaaataatactttggaagtagtgtatataatattaactgaagggt 308  Q
    ||||||| ||||||||  |||||||  | |||||| |||||||||||||| |||||||||||||    |||||||||||| |||||| ||||||||    
T  41645392 tattttatcaaattattttaatcaaccattggtttgtttttcattaaaga-aaaataatacttt---tgtagtgtatatagtattaattgaagggt 41645301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 209 - 269
Target Start/End: Complemental strand, 11195235 - 11195175
Alignment:
Q  209 atgttattttaccaaattatcctaatcaattactggtttatttttcattaaagaaaaaata 269  Q
    ||||||||||||||||||||| || | ||||| | |||| |||||||||||| ||||||||    
T  11195235 atgttattttaccaaattatcttatttaattattagtttgtttttcattaaaaaaaaaata 11195175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 129 - 161
Target Start/End: Original strand, 33822411 - 33822443
Alignment:
Q  129 tatactccctccgtttcaaaatgaatatcgttt 161  Q
    |||||||||||||||||||||||||||||||||    
T  33822411 tatactccctccgtttcaaaatgaatatcgttt 33822443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 138 - 189
Target Start/End: Complemental strand, 11970427 - 11970376
Alignment:
Q  138 tccgtttcaaaatgaatatcgtttaagatttttacacacatattaagaaatg 189  Q
    ||||||| ||||||| | || ||||||||||||||||||| |||||||||||    
T  11970427 tccgttttaaaatgagtgtcatttaagatttttacacacaaattaagaaatg 11970376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 207 - 299
Target Start/End: Original strand, 27557811 - 27557898
Alignment:
Q  207 agatgttattttaccaaattatcctaatcaattactggtttatttttcattaaagaaaaaataatactttggaagtagtgtatataatattaa 299  Q
    ||||||||||||| |||||||||  |||| | || || ||||||||||||||||    |||||||| |||| |||||||||||||| ||||||    
T  27557811 agatgttattttatcaaattatctgaatcgactattg-tttatttttcattaaa----aaataatattttgaaagtagtgtatatagtattaa 27557898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 214 - 265
Target Start/End: Complemental strand, 27600550 - 27600499
Alignment:
Q  214 attttaccaaattatcctaatcaattactggtttatttttcattaaagaaaa 265  Q
    |||||||||||||||||||||||| || || ||| |||||||||||| ||||    
T  27600550 attttaccaaattatcctaatcaactattgatttgtttttcattaaaaaaaa 27600499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 242 - 301
Target Start/End: Original strand, 34382105 - 34382164
Alignment:
Q  242 tggtttatttttcattaaagaaaaaataatactttggaagtagtgtatataatattaact 301  Q
    |||||| ||| |||||||| ||||||| ||| |||| |||||||||||||| ||||||||    
T  34382105 tggtttgtttctcattaaataaaaaatgatattttgaaagtagtgtatatagtattaact 34382164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 259 - 308
Target Start/End: Complemental strand, 13761668 - 13761618
Alignment:
Q  259 aagaaaaaataatactttggaagtagtgt-atataatattaactgaagggt 308  Q
    ||||||||||||||||||||||||||||| | ||| |||||| ||||||||    
T  13761668 aagaaaaaataatactttggaagtagtgtaacatagtattaattgaagggt 13761618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 100; Significance: 2e-49; HSPs: 65)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 129 - 314
Target Start/End: Complemental strand, 30315552 - 30315364
Alignment:
Q  129 tatactccctccgtttcaaaatgaatatcgtttaagatttttacacacatattaagaaatgcattaattnnnnnnn-ga-agatgttattttaccaaatt 226  Q
    |||||||||||||||||||||||||| |||||||||  | |||||||||||||||||||||||||||||        || ||||||||||||||||||||    
T  30315552 tatactccctccgtttcaaaatgaatgtcgtttaaggctgttacacacatattaagaaatgcattaattaagagaaagagagatgttattttaccaaatt 30315453  T
Q  227 atcctaatcaattactggtttatttttcattaaagaaaaaataatac-tttggaagtagtgtatataatattaactgaagggtgtaatt 314  Q
    ||||||||||| || |||||| ||||||||||||||||||||||||| |||| |||||||||||||| |||||| |||||||| |||||    
T  30315452 atcctaatcaactattggtttgtttttcattaaagaaaaaataatacttttgaaagtagtgtatatagtattaattgaagggtataatt 30315364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 131 - 304
Target Start/End: Original strand, 36844652 - 36844827
Alignment:
Q  131 tactccctccgtttcaaaatgaatatcgtttaagatttttacacacatattaagaaatgcattaattnnnnnnn-ga-agatgttattttaccaaattat 228  Q
    |||||||||||||||||||||||| ||||||||| |||||| |||||||||||||||||||||||||        || |||| |||||||||||||||||    
T  36844652 tactccctccgtttcaaaatgaatgtcgtttaaggtttttagacacatattaagaaatgcattaattaacagaaagagagatattattttaccaaattat 36844751  T
Q  229 cctaatcaattactggtttatttttcattaaagaaaaaataatactttggaagtagtgtatataatattaactgaa 304  Q
    ||||||||| || || ||  ||||||||||||||||| ||||||||||||||||||||||||||||||||| ||||    
T  36844752 cctaatcaactattgattagtttttcattaaagaaaacataatactttggaagtagtgtatataatattaattgaa 36844827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 207 - 308
Target Start/End: Complemental strand, 19373748 - 19373647
Alignment:
Q  207 agatgttattttaccaaattatcctaatcaattactggtttatttttcattaaagaaaaaataatactttggaagtagtgtatataatattaactgaagg 306  Q
    |||||||||||||||||||| |||||||||| || |||||| |||||||||||||||||||||| |||||||||||||||||||| ||||||| ||||||    
T  19373748 agatgttattttaccaaattctcctaatcaactattggtttgtttttcattaaagaaaaaataaaactttggaagtagtgtatatgatattaattgaagg 19373649  T
Q  307 gt 308  Q
    ||    
T  19373648 gt 19373647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 207 - 307
Target Start/End: Complemental strand, 38141112 - 38141012
Alignment:
Q  207 agatgttattttaccaaattatcctaatcaattactggtttatttttcattaaagaaaaaataatactttggaagtagtgtatataatattaactgaagg 306  Q
    |||||||||||||||||||||| ||||||||||| |||||| |||||||||||||||||||| ||| ||||||||||||||||||| |||||| ||||||    
T  38141112 agatgttattttaccaaattattctaatcaattattggtttgtttttcattaaagaaaaaattatattttggaagtagtgtatatagtattaattgaagg 38141013  T
Q  307 g 307  Q
    |    
T  38141012 g 38141012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 130 - 308
Target Start/End: Complemental strand, 42072226 - 42072046
Alignment:
Q  130 atactccctccgtttcaaaatgaatatcgtttaagatttttacacacatattaagaaatgcattaattnnnnnnngaagat--gttattttaccaaatta 227  Q
    ||||| ||||||||||||||||||| |||| |||  |||||||||||||||||||||||  |||||||         ||||  |||||||||| ||||||    
T  42072226 atacttcctccgtttcaaaatgaatgtcgtataatgtttttacacacatattaagaaatatattaattaaaagaaagagatatgttattttactaaatta 42072127  T
Q  228 tcctaatcaattactggtttatttttcattaaagaaaaaataatactttggaagtagtgtatataatattaactgaagggt 308  Q
    || ||||||| || || ||| |||| |||||||||||| |||||||||| |||||| ||||||||||||||| ||||||||    
T  42072126 tcataatcaactattgatttgttttccattaaagaaaacataatactttagaagtaatgtatataatattaattgaagggt 42072046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 131 - 308
Target Start/End: Original strand, 30934718 - 30934898
Alignment:
Q  131 tactccctccgtttcaaaatgaatatcgtttaagatttt-tacacacatattaagaaatgcattaattnnnnnnn-ga-agatgttattttaccaaatta 227  Q
    |||||||||||||| ||||| ||||||||||||  |||| ||||||||| || |||||| ||||| ||        || ||||||||||||| |||||||    
T  30934718 tactccctccgttttaaaataaatatcgtttaaatttttctacacacatgttgagaaatacattagttaaaagaaagagagatgttattttatcaaatta 30934817  T
Q  228 tcctaatcaattactggtttatttttcattaaagaaaaaataatactttggaagtagtgtatataatattaactgaagggt 308  Q
    || ||||||| || |||||| |||||||||||||| ||||||||||||| ||||||||||||||| |||||| ||| ||||    
T  30934818 tcataatcaaatattggtttgtttttcattaaagataaaataatactttagaagtagtgtatatagtattaattgaggggt 30934898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 214 - 315
Target Start/End: Original strand, 41287490 - 41287592
Alignment:
Q  214 attttaccaaattatcctaatcaattactggtttatttttcattaaagaaaaaataatactttggaagtagtgt-atataatattaactgaagggtgtaa 312  Q
    |||||||||||||||||||||||| || |||||| ||||||||||||||||||| ||||||||||||||| ||| | |||||||||| |||||||| |||    
T  41287490 attttaccaaattatcctaatcaactattggtttctttttcattaaagaaaaaaaaatactttggaagtaatgtaacataatattaattgaagggtataa 41287589  T
Q  313 ttg 315  Q
    |||    
T  41287590 ttg 41287592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 214 - 308
Target Start/End: Complemental strand, 51398166 - 51398071
Alignment:
Q  214 attttaccaaattatcctaatcaattactggtttatttttcattaaagaaaaaataatactttggaagtagtgt-atataatattaactgaagggt 308  Q
    |||||||||||||||||||||||| || || |||||||||||||||||||||||||||| |||||||||||||| | ||| |||||| ||||||||    
T  51398166 attttaccaaattatcctaatcaactattgatttatttttcattaaagaaaaaataatattttggaagtagtgtaacatagtattaattgaagggt 51398071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 214 - 314
Target Start/End: Complemental strand, 2458164 - 2458062
Alignment:
Q  214 attttaccaaattatcctaatcaattactggtttatttttcattaaagaa-aaaataatactttggaagtagtgt-atataatattaactgaagggtgta 311  Q
    |||||||||||||||||||||||| || ||||||| |||||||||||||| |||| ||||||||||||||||||| ||||| |||||| |||||||| ||    
T  2458164 attttaccaaattatcctaatcaactattggtttaattttcattaaagaaaaaaacaatactttggaagtagtgtaatatagtattaattgaagggtata 2458065  T
Q  312 att 314  Q
    |||    
T  2458064 att 2458062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 214 - 288
Target Start/End: Complemental strand, 38016530 - 38016456
Alignment:
Q  214 attttaccaaattatcctaatcaattactggtttatttttcattaaagaaaaaataatactttggaagtagtgta 288  Q
    |||||||||||||||||||||||| || | |||| ||||||||||||||||||||||||||||||||||||||||    
T  38016530 attttaccaaattatcctaatcaactattagtttgtttttcattaaagaaaaaataatactttggaagtagtgta 38016456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 214 - 288
Target Start/End: Complemental strand, 39359076 - 39359002
Alignment:
Q  214 attttaccaaattatcctaatcaattactggtttatttttcattaaagaaaaaataatactttggaagtagtgta 288  Q
    |||||||||||||||||||||||| || |||||| |||||||||||||||||||||||||||| |||||||||||    
T  39359076 attttaccaaattatcctaatcaactattggtttgtttttcattaaagaaaaaataatactttagaagtagtgta 39359002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 214 - 288
Target Start/End: Complemental strand, 44676377 - 44676303
Alignment:
Q  214 attttaccaaattatcctaatcaattactggtttatttttcattaaagaaaaaataatactttggaagtagtgta 288  Q
    |||||||||||||||||||||||| || |||||| |||||||||||||||||||||||||||||||| |||||||    
T  44676377 attttaccaaattatcctaatcaactattggtttgtttttcattaaagaaaaaataatactttggaactagtgta 44676303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 207 - 304
Target Start/End: Original strand, 9189423 - 9189520
Alignment:
Q  207 agatgttattttaccaaattatcctaatcaattactggtttatttttcattaaagaaaaaataatactttggaagtagtgtatataatattaactgaa 304  Q
    ||||||||||||||||||| ||| ||||||| || |||||| ||||| |||||||||||||||||| |||||||||| |||||||| |||||| ||||    
T  9189423 agatgttattttaccaaatcatcgtaatcaactattggtttgttttttattaaagaaaaaataatattttggaagtaatgtatatagtattaattgaa 9189520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 214 - 306
Target Start/End: Complemental strand, 30431276 - 30431183
Alignment:
Q  214 attttaccaaattatcctaatcaattactggtttatttttcattaaagaaaaaataatactttggaagtagtgt-atataatattaactgaagg 306  Q
    |||||||||||||||||||||||| || ||  || |||||||||| |||||||||||||||||||||||||||| |||||||||||| ||||||    
T  30431276 attttaccaaattatcctaatcaactattgacttgtttttcattagagaaaaaataatactttggaagtagtgtaatataatattaattgaagg 30431183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 146 - 292
Target Start/End: Original strand, 7230819 - 7230966
Alignment:
Q  146 aaaatgaatatcgtttaagatttttacacacatattaagaaatgcattaat-tnnnnnnnga-agatgttattttaccaaattatcctaatcaattactg 243  Q
    ||||||||| |||||||||||||||||||||||||||||||||| ||||||         || ||||| |||||||  |||||||||||||||| || ||    
T  7230819 aaaatgaatgtcgtttaagatttttacacacatattaagaaatgaattaataaaaataaagagagatgatattttagtaaattatcctaatcaactattg 7230918  T
Q  244 gtttatttttcattaaagaaaaaataatactttggaagtagtgtatata 292  Q
    |||| ||| ||||||||| |||||||||| ||| |||||||||||||||    
T  7230919 gtttctttctcattaaag-aaaaataataatttcgaagtagtgtatata 7230966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 214 - 308
Target Start/End: Original strand, 23525310 - 23525405
Alignment:
Q  214 attttaccaaattatcctaatcaattactggtttatttttcattaaagaaaaaataatactttggaagtagtgt-atataatattaactgaagggt 308  Q
    |||||||||||||||| ||||||| || |||||| ||||||||||||||||||||||||||||||||||| ||| | ||| |||||| ||||||||    
T  23525310 attttaccaaattatcataatcaactattggtttgtttttcattaaagaaaaaataatactttggaagtaatgtaacatagtattaattgaagggt 23525405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 214 - 308
Target Start/End: Original strand, 33194025 - 33194120
Alignment:
Q  214 attttaccaaattatcctaatcaattactggtttatttttcattaaagaaaaaataatactttggaagtagtgt-atataatattaactgaagggt 308  Q
    |||||||||||||||| ||||||| || || ||| ||||||||||||||||||||||||||||||||||| ||| | |||||||||| ||||||||    
T  33194025 attttaccaaattatcataatcaactattgatttgtttttcattaaagaaaaaataatactttggaagtaatgtaacataatattaattgaagggt 33194120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 214 - 308
Target Start/End: Original strand, 45213716 - 45213811
Alignment:
Q  214 attttaccaaattatcctaatcaattactggtttatttttcattaaagaaaaaataatactttggaagtagtgt-atataatattaactgaagggt 308  Q
    ||||||||||||||| |||||||| || ||||||  |||||||||||||||||||||||||||| ||||||||| ||||| |||||| ||||||||    
T  45213716 attttaccaaattattctaatcaactattggtttgcttttcattaaagaaaaaataatactttgaaagtagtgtaatatagtattaattgaagggt 45213811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 130 - 308
Target Start/End: Complemental strand, 27067840 - 27067669
Alignment:
Q  130 atactccctccgtttcaaaatgaatatcgtttaagatttttacacacatattaagaaatgcattaattnnnnnnngaagatgttattttaccaaattatc 229  Q
    ||||||| ||||||| ||||||| | ||||||||| |||||||||||||  |||||||||||||||||        ||||||||| ||||||||||||||    
T  27067840 atactccttccgttttaaaatgagtgtcgtttaaggtttttacacacat--taagaaatgcattaattaaaaa---aagatgttaatttaccaaattatc 27067746  T
Q  230 ctaatcaattactggtttatttttcattaaagaaaaaataatactttggaagtagtgtatataatattaactgaagggt 308  Q
    |||||||| || ||||||  |||||||||||| ||||||||   |||| |||| |||||| || |||||| ||||||||    
T  27067745 ctaatcaactattggttt-gttttcattaaag-aaaaataaagttttgaaagttgtgtatgtagtattaattgaagggt 27067669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 226 - 288
Target Start/End: Original strand, 35557764 - 35557826
Alignment:
Q  226 tatcctaatcaattactggtttatttttcattaaagaaaaaataatactttggaagtagtgta 288  Q
    |||||||||||| || |||||||||||||||||||||||||||||||||||||||||||||||    
T  35557764 tatcctaatcaactattggtttatttttcattaaagaaaaaataatactttggaagtagtgta 35557826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 214 - 315
Target Start/End: Complemental strand, 36460961 - 36460860
Alignment:
Q  214 attttaccaaattatcctaatcaattactggtttatttttcattaaagaaaaaataatactttggaagtagtgt-atataatattaactgaagggtgtaa 312  Q
    |||||||||||||||||||||||| || |||||| |||||||| |||| ||||||||||||||||||||||| | | |||||||||| ||||||||| ||    
T  36460961 attttaccaaattatcctaatcaactattggtttgtttttcatcaaag-aaaaataatactttggaagtagtataacataatattaattgaagggtgcaa 36460863  T
Q  313 ttg 315  Q
    |||    
T  36460862 ttg 36460860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 214 - 315
Target Start/End: Original strand, 47895338 - 47895440
Alignment:
Q  214 attttaccaaattatcctaatcaattactggtttatttttcattaaagaaaaaataatactttggaagtagtgt-atataatattaactgaagggtgtaa 312  Q
    |||||||||||||||||||||||| || | ||||  ||||||||||||||||||||||||||||||| |||||| | ||| |||||| |||||||| |||    
T  47895338 attttaccaaattatcctaatcaactatttgtttgcttttcattaaagaaaaaataatactttggaaatagtgtaacatagtattaattgaagggtataa 47895437  T
Q  313 ttg 315  Q
    |||    
T  47895438 ttg 47895440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 211 - 296
Target Start/End: Complemental strand, 8817299 - 8817214
Alignment:
Q  211 gttattttaccaaattatcctaatcaattactggtttatttttcattaaagaaaaaataatactttggaagtagtgtatataatat 296  Q
    ||||||||| |||||||| |||||||| || || ||||||||||||||||||||||||||||| || |||||||||| ||||||||    
T  8817299 gttattttatcaaattattctaatcaactattgatttatttttcattaaagaaaaaataatacattagaagtagtgtgtataatat 8817214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 214 - 308
Target Start/End: Original strand, 31853556 - 31853651
Alignment:
Q  214 attttaccaaattatcctaatcaattactggtttatttttcattaaagaaaaaataatactttggaagtagtgt-atataatattaactgaagggt 308  Q
    |||||| ||||||||||||||||| || |||||| | ||||||||||||||||||||||||||| ||||||||| | ||| |||||| ||||||||    
T  31853556 attttatcaaattatcctaatcaactattggtttgtctttcattaaagaaaaaataatactttgaaagtagtgtaacatagtattaattgaagggt 31853651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 214 - 288
Target Start/End: Complemental strand, 38363947 - 38363873
Alignment:
Q  214 attttaccaaattatcctaatcaattactggtttatttttcattaaagaaaaaataatactttggaagtagtgta 288  Q
    ||||||||||||||||||||| ||    |||||| ||||||||||||||||||||||||||||||||||||||||    
T  38363947 attttaccaaattatcctaataaaccgttggtttgtttttcattaaagaaaaaataatactttggaagtagtgta 38363873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 216 - 308
Target Start/End: Original strand, 50088312 - 50088405
Alignment:
Q  216 tttaccaaattatcctaatcaattactggtttatttttcattaaagaaaaaataatactttggaagtagtgt-atataatattaactgaagggt 308  Q
    |||||||||||||| ||||||| || |||||| |||||||||||||||||| |||||||||| ||||||||| | ||| |||||| ||||||||    
T  50088312 tttaccaaattatcataatcaactattggtttgtttttcattaaagaaaaattaatactttgaaagtagtgtaacatagtattaattgaagggt 50088405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 138 - 308
Target Start/End: Complemental strand, 48903519 - 48903347
Alignment:
Q  138 tccgtttcaaaatgaatatcgtttaagatttttacacacatattaagaaatgcattaattnnnnnnngaagatgt--tattttaccaaattatcctaatc 235  Q
    |||||||  |||||| | ||||||||| |||||||| |||||||||||||||||||||||         |||| |  ||||||| ||||||||  |||||    
T  48903519 tccgtttttaaatgagtgtcgtttaagttttttacatacatattaagaaatgcattaattaaaagaaagagatatattattttatcaaattattttaatc 48903420  T
Q  236 aattactggtttatttttcattaaagaaaaaataatactttggaagtagtgtatataatattaactgaagggt 308  Q
    || || || ||| ||||| |||||||||||||||||||| || || ||||||||||| |||||| || |||||    
T  48903419 aactattgctttgtttttaattaaagaaaaaataatactatgaaattagtgtatatagtattaattggagggt 48903347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 214 - 308
Target Start/End: Original strand, 13756867 - 13756962
Alignment:
Q  214 attttaccaaattatcctaatcaattactggtttatttttcattaaagaaaaaataatactttggaagtagtgt-atataatattaactgaagggt 308  Q
    |||||| ||||||||||||||||| || |||||| ||||| ||||||||||||||||||||||  ||||| ||| | |||||||||| ||||||||    
T  13756867 attttagcaaattatcctaatcaactattggtttgttttttattaaagaaaaaataatactttaaaagtaatgtaacataatattaattgaagggt 13756962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 205 - 304
Target Start/End: Complemental strand, 40487992 - 40487893
Alignment:
Q  205 gaagatgttattttaccaaattatcctaatcaattactggtttatttttcattaaagaaaaaataatactttggaagtagtgtatataatattaactgaa 304  Q
    ||||||||||||||| ||||||||  ||||||| || |  ||| ||||||  |||||||||||||||||||| ||||||||||||||| |||||| ||||    
T  40487992 gaagatgttattttatcaaattattataatcaactattaatttgtttttcgataaagaaaaaataatactttagaagtagtgtatatagtattaattgaa 40487893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 214 - 288
Target Start/End: Complemental strand, 11393701 - 11393627
Alignment:
Q  214 attttaccaaattatcctaatcaattactggtttatttttcattaaagaaaaaataatactttggaagtagtgta 288  Q
    |||||| ||||||||||||||||| || || ||| || || ||||||||||||||||||||||||||||||||||    
T  11393701 attttatcaaattatcctaatcaactattgatttgttattaattaaagaaaaaataatactttggaagtagtgta 11393627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 214 - 288
Target Start/End: Original strand, 32492176 - 32492249
Alignment:
Q  214 attttaccaaattatcctaatcaattactggtttatttttcattaaagaaaaaataatactttggaagtagtgta 288  Q
    |||||| |||||||||||||||||||| || ||| ||||| |||||||||||||||||| |||||||||||||||    
T  32492176 attttatcaaattatcctaatcaattattgattttttttt-attaaagaaaaaataatattttggaagtagtgta 32492249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 214 - 288
Target Start/End: Original strand, 45518478 - 45518552
Alignment:
Q  214 attttaccaaattatcctaatcaattactggtttatttttcattaaagaaaaaataatactttggaagtagtgta 288  Q
    |||||| |||||||||||||||||||| || | |||||||||||||||||||| |||||||||| || |||||||    
T  45518478 attttatcaaattatcctaatcaattattgatatatttttcattaaagaaaaattaatactttgaaaatagtgta 45518552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 214 - 288
Target Start/End: Complemental strand, 47138121 - 47138045
Alignment:
Q  214 attttaccaaattatcctaatcaattactggtttatttttcattaaagaa--aaaataatactttggaagtagtgta 288  Q
    ||||||||||||||||||||||||||| | |||| |||||||||||||||  ||||||||| |||||||||| ||||    
T  47138121 attttaccaaattatcctaatcaattattcgtttgtttttcattaaagaaaaaaaataatattttggaagtactgta 47138045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 214 - 304
Target Start/End: Original strand, 53200675 - 53200766
Alignment:
Q  214 attttaccaaattatcctaatcaattactggtttatttttcattaaagaaaaaataatactttggaagtagtgt-atataatattaactgaa 304  Q
    |||||||||||||||||||||||| || | ||||  |||||||||| ||||||||| ||||||| ||||||||| | |||||||||| ||||    
T  53200675 attttaccaaattatcctaatcaactattagtttgcttttcattaaggaaaaaatagtactttgaaagtagtgtaacataatattaattgaa 53200766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 129 - 191
Target Start/End: Original strand, 11337530 - 11337592
Alignment:
Q  129 tatactccctccgtttcaaaatgaatatcgtttaagatttttacacacatattaagaaatgca 191  Q
    |||||||| ||| ||||||||||||| ||||||||| ||||||||||||||||| ||||||||    
T  11337530 tatactccttccatttcaaaatgaatgtcgtttaaggtttttacacacatattatgaaatgca 11337592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 246 - 304
Target Start/End: Complemental strand, 22857213 - 22857155
Alignment:
Q  246 ttatttttcattaaagaaaaaataatactttggaagtagtgtatataatattaactgaa 304  Q
    |||||||| |||||||||||||||||| ||| |||||||||||||||||||||| ||||    
T  22857213 ttattttttattaaagaaaaaataatattttagaagtagtgtatataatattaattgaa 22857155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 211 - 308
Target Start/End: Complemental strand, 50346783 - 50346686
Alignment:
Q  211 gttattttaccaaattatcctaatcaattactggtttatttttcattaaagaaaaaataatactttggaagtagtgtatataatattaactgaagggt 308  Q
    ||||||||| ||||||||| |||| || || || ||| ||||||||||||||||||||||||  ||||||||| ||||| || |||| | ||||||||    
T  50346783 gttattttatcaaattatcttaattaactattgatttgtttttcattaaagaaaaaataatatgttggaagtaatgtatttattattgattgaagggt 50346686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 132 - 197
Target Start/End: Original strand, 50646052 - 50646117
Alignment:
Q  132 actccctccgtttcaaaatgaatatcgtttaagatttttacacacatattaagaaatgcattaatt 197  Q
    ||||| ||||||| ||||||| | |||||||||||||||||||||||||||| ||||| |||||||    
T  50646052 actccttccgttttaaaatgagtgtcgtttaagatttttacacacatattaaaaaatgtattaatt 50646117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 214 - 308
Target Start/End: Original strand, 30426317 - 30426413
Alignment:
Q  214 attttaccaaattatcctaatcaattactggtttatttttcattaaag-aaaaaataatactttggaagtagtgt-atataatattaactgaagggt 308  Q
    |||||||||||||||| ||||||| || |||||| ||||||||| ||| |||||| |||| |||||||||||||| | ||| |||||| ||||||||    
T  30426317 attttaccaaattatcttaatcaactattggtttgtttttcattgaagaaaaaaaaaatattttggaagtagtgtaacatagtattaattgaagggt 30426413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 137 - 197
Target Start/End: Original strand, 40717288 - 40717348
Alignment:
Q  137 ctccgtttcaaaatgaatatcgtttaagatttttacacacatattaagaaatgcattaatt 197  Q
    |||| |||| |||||||  ||||||||| ||||||||||||||||||||||||||||||||    
T  40717288 ctccatttccaaatgaacgtcgtttaaggtttttacacacatattaagaaatgcattaatt 40717348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 130 - 191
Target Start/End: Complemental strand, 45460899 - 45460836
Alignment:
Q  130 atactccctccgtttcaaaatgaatatcgtttaagatttttacacaca--tattaagaaatgca 191  Q
    ||||||||||| ||||||||||||  ||||||||||||||||||||||  ||||||||||||||    
T  45460899 atactccctccatttcaaaatgaacgtcgtttaagatttttacacacatgtattaagaaatgca 45460836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 133 - 189
Target Start/End: Complemental strand, 46160906 - 46160850
Alignment:
Q  133 ctccctccgtttcaaaatgaatatcgtttaagatttttacacacatattaagaaatg 189  Q
    |||||||||||||||||||||| || |||||| |||||||||||| |||||||||||    
T  46160906 ctccctccgtttcaaaatgaatgtcctttaaggtttttacacacaaattaagaaatg 46160850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 130 - 189
Target Start/End: Complemental strand, 2985525 - 2985466
Alignment:
Q  130 atactccctccgtttcaaaatgaatatcgtttaagatttttacacacatattaagaaatg 189  Q
    ||||||||||| ||||||||| ||||||| ||||| || |||||||||||||||||||||    
T  2985525 atactccctccatttcaaaataaatatcgcttaaggttgttacacacatattaagaaatg 2985466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 214 - 308
Target Start/End: Original strand, 3152801 - 3152895
Alignment:
Q  214 attttaccaaattatcctaatcaattactggtttatttttcattaaagaaaaaataatactttggaagtagtgt-atataatattaactgaagggt 308  Q
    |||||||| |||||| ||||||||||| |||||| ||||| ||||||||||| | |||| |||||||||||||| | ||| |||||| ||||||||    
T  3152801 attttacccaattattctaatcaattattggtttgttttt-attaaagaaaataaaatattttggaagtagtgtaacatagtattaattgaagggt 3152895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 242 - 308
Target Start/End: Original strand, 36729832 - 36729899
Alignment:
Q  242 tggtttatttttcattaaagaaaaaataatactttggaagtagtgt-atataatattaactgaagggt 308  Q
    |||||| |||||||||||| |||||||||||||||||||||| ||| | |||||||||| ||||||||    
T  36729832 tggtttgtttttcattaaataaaaaataatactttggaagtaatgtaacataatattaattgaagggt 36729899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 207 - 297
Target Start/End: Original strand, 40717658 - 40717750
Alignment:
Q  207 agatgttattttaccaaattatcctaatcaattactggtttatttttcattaaagaaaaa---ataatactttggaagtagtgtatataatatt 297  Q
    ||||||||||||||||||||||| ||||||| || ||||||  |||||||||||||||||   | |||| ||||||||  ||||||||||||||    
T  40717658 agatgttattttaccaaattatcttaatcaactattggttt-gttttcattaaagaaaaaaagaaaatattttggaagaggtgtatataatatt 40717750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 214 - 304
Target Start/End: Complemental strand, 45566955 - 45566864
Alignment:
Q  214 attttaccaaattatcctaatcaattactggtttatttttcattaaagaaaaaataatactttggaagtagtgt-atataatattaactgaa 304  Q
    ||||||||||||||||||||||||  | |||||| ||||||||||||||||||| |||| |||  ||||| ||| ||||| |||||| ||||    
T  45566955 attttaccaaattatcctaatcaaccattggtttgtttttcattaaagaaaaaacaatattttaaaagtaatgtaatatagtattaattgaa 45566864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 138 - 197
Target Start/End: Complemental strand, 48901940 - 48901881
Alignment:
Q  138 tccgtttcaaaatgaatatcgtttaagatttttacacacatattaagaaatgcattaatt 197  Q
    ||||||| ||||||| | ||||||||| |||||||| |||||||||||||||||||||||    
T  48901940 tccgttttaaaatgagtgtcgtttaagttttttacatacatattaagaaatgcattaatt 48901881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 140 - 197
Target Start/End: Complemental strand, 31190707 - 31190650
Alignment:
Q  140 cgtttcaaaatgaatatcgtttaagatttttacacacatattaagaaatgcattaatt 197  Q
    ||||| ||||||||| ||||||||| |||||||| ||||||||||||||| |||||||    
T  31190707 cgttttaaaatgaatgtcgtttaaggtttttacatacatattaagaaatgtattaatt 31190650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 131 - 191
Target Start/End: Original strand, 42571449 - 42571509
Alignment:
Q  131 tactccctccgtttcaaaatgaatatcgtttaagatttttacacacatattaagaaatgca 191  Q
    |||||||||||||||||||||| |  ||||| || | ||||||||||||||||||||||||    
T  42571449 tactccctccgtttcaaaatgagtgccgttttaggtctttacacacatattaagaaatgca 42571509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 138 - 197
Target Start/End: Complemental strand, 22857289 - 22857230
Alignment:
Q  138 tccgtttcaaaatgaatatcgtttaagatttttacacacatattaagaaatgcattaatt 197  Q
    ||||||||||||| ||| || |||||  |||||||||||||||||| |||||||||||||    
T  22857289 tccgtttcaaaataaatgtcatttaaagtttttacacacatattaaaaaatgcattaatt 22857230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 130 - 191
Target Start/End: Complemental strand, 3986090 - 3986031
Alignment:
Q  130 atactccctccgtttcaaaatgaatatcgtttaagatttttacacacatattaagaaatgca 191  Q
    ||||||| || |||||||||||||| ||||||||| |||||||||||  |||||||||||||    
T  3986090 atactccttcagtttcaaaatgaatgtcgtttaaggtttttacacac--attaagaaatgca 3986031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 214 - 267
Target Start/End: Complemental strand, 41850537 - 41850485
Alignment:
Q  214 attttaccaaattatcctaatcaattactggtttatttttcattaaagaaaaaa 267  Q
    |||||||||||||||||||||||| || ||||||  ||||||||||||||||||    
T  41850537 attttaccaaattatcctaatcaactattggttt-gttttcattaaagaaaaaa 41850485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 138 - 191
Target Start/End: Original strand, 44064382 - 44064435
Alignment:
Q  138 tccgtttcaaaatgaatatcgtttaagatttttacacacatattaagaaatgca 191  Q
    ||||||||||||||| | || ||| || ||||||||||||||||||||||||||    
T  44064382 tccgtttcaaaatgagtgtctttttaggtttttacacacatattaagaaatgca 44064435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 231 - 308
Target Start/End: Complemental strand, 48901858 - 48901781
Alignment:
Q  231 taatcaattactggtttatttttcattaaagaaaaaataatactttggaagtagtgtatataatattaactgaagggt 308  Q
    ||||||| || || ||| ||||| |||||||||||||||||||| || || ||||||||||| |||||| || |||||    
T  48901858 taatcaactattgctttgtttttaattaaagaaaaaataatactatgaaattagtgtatatagtattaattggagggt 48901781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 135 - 188
Target Start/End: Complemental strand, 54918318 - 54918265
Alignment:
Q  135 ccctccgtttcaaaatgaatatcgtttaagatttttacacacatattaagaaat 188  Q
    ||||| |||||||||||| ||||||||||| |||||||||| | ||||||||||    
T  54918318 ccctctgtttcaaaatgagtatcgtttaaggtttttacacataaattaagaaat 54918265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 129 - 188
Target Start/End: Complemental strand, 5244827 - 5244768
Alignment:
Q  129 tatactccctccgtttcaaaatgaatatcgtttaagatttttacacacatattaagaaat 188  Q
    |||||||||||||||||| ||||||| | |||||||  |||  |||||||||||||||||    
T  5244827 tatactccctccgtttcacaatgaattttgtttaaggatttggcacacatattaagaaat 5244768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 129 - 188
Target Start/End: Complemental strand, 19897530 - 19897471
Alignment:
Q  129 tatactccctccgtttcaaaatgaatatcgtttaagatttttacacacatattaagaaat 188  Q
    ||||||||||| |||| ||||||| | | ||||||| || ||||||||||||||||||||    
T  19897530 tatactccctctgttttaaaatgagtgttgtttaaggttgttacacacatattaagaaat 19897471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 129 - 196
Target Start/End: Original strand, 51057667 - 51057734
Alignment:
Q  129 tatactccctccgtttcaaaatgaatatcgtttaagatttttacacacatattaagaaatgcattaat 196  Q
    |||||| | ||||||| ||||||| | |||||| ||||| |||||| |||||||||||||||| ||||    
T  51057667 tatacttcatccgttttaaaatgagtgtcgttttagattgttacacgcatattaagaaatgcaataat 51057734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 249 - 288
Target Start/End: Complemental strand, 51482056 - 51482017
Alignment:
Q  249 tttttcattaaagaaaaaataatactttggaagtagtgta 288  Q
    ||||||||||||||||||||||| ||||||||||| ||||    
T  51482056 tttttcattaaagaaaaaataatgctttggaagtaatgta 51482017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 137 - 175
Target Start/End: Complemental strand, 20028655 - 20028617
Alignment:
Q  137 ctccgtttcaaaatgaatatcgtttaagatttttacaca 175  Q
    |||||||||||||||||||||||||||  ||||||||||    
T  20028655 ctccgtttcaaaatgaatatcgtttaaattttttacaca 20028617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 129 - 191
Target Start/End: Complemental strand, 42886981 - 42886919
Alignment:
Q  129 tatactccctccgtttcaaaatgaatatcgtttaagatttttacacacatattaagaaatgca 191  Q
    |||||||||||||||| ||||||| | |||||| || | |||||| |||||||||||| ||||    
T  42886981 tatactccctccgttttaaaatgagtgtcgttttaggtgtttacaaacatattaagaactgca 42886919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 131 - 191
Target Start/End: Complemental strand, 21205641 - 21205583
Alignment:
Q  131 tactccctccgtttcaaaatgaatatcgtttaagatttttacacacatattaagaaatgca 191  Q
    |||||| | ||||| ||||||| | ||||||||||||||||  ||||||||||||||||||    
T  21205641 tactccgttcgttttaaaatgagtgtcgtttaagattttta--cacatattaagaaatgca 21205583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 212 - 288
Target Start/End: Complemental strand, 3986008 - 3985932
Alignment:
Q  212 ttattttaccaaattatcctaatcaattactggtttatttttcattaaagaaaaaataatactttggaagtagtgta 288  Q
    |||||||||||||||||||| || || || |||||| |||| || ||||| |||| ||||||| ||| |||| ||||    
T  3986008 ttattttaccaaattatccttattaactattggtttgttttccactaaagtaaaagtaatactatgggagtaatgta 3985932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 214 - 274
Target Start/End: Complemental strand, 39168862 - 39168802
Alignment:
Q  214 attttaccaaattatcctaatcaattactggtttatttttcattaaagaaaaaataatact 274  Q
    |||||| |||||||||||||| || || |  ||| |||||||||||| |||||||||||||    
T  39168862 attttatcaaattatcctaattaactattaatttgtttttcattaaaaaaaaaataatact 39168802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 96; Significance: 5e-47; HSPs: 73)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 96; E-Value: 5e-47
Query Start/End: Original strand, 131 - 308
Target Start/End: Complemental strand, 47817979 - 47817799
Alignment:
Q  131 tactccctccgtttcaaaatgaatatcgtttaagatttttacacacatattaagaaatgcattaattnnnnnnn-ga-agatgttattttaccaaattat 228  Q
    |||||||||||||||||||||||| ||||||||| |||||| |||||||||||||||||||||||||        || ||||||||||||||||| ||||    
T  47817979 tactccctccgtttcaaaatgaatgtcgtttaagttttttatacacatattaagaaatgcattaattaaaagaaagagagatgttattttaccaatttat 47817880  T
Q  229 cctaatcaattactggtttatttttcattaaagaa-aaaataatactttggaagtagtgtatataatattaactgaagggt 308  Q
    | ||||||| || |||||| ||||||||||||||| ||||||||||||||||||||||||||||| |||||| ||||||||    
T  47817879 cataatcaactattggtttgtttttcattaaagaaaaaaataatactttggaagtagtgtatatagtattaattgaagggt 47817799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 134 - 292
Target Start/End: Original strand, 19451124 - 19451284
Alignment:
Q  134 tccctccgtttcaaaatgaatatcgtttaagatttttacacacatattaagaaatgcattaattnnnnnnn-ga-agatgttattttaccaaattatcct 231  Q
    ||||||||||||||||||||| | ||||||  ||||||||||||||||||||||||||||||||        || |||||||||||||||||| || |||    
T  19451124 tccctccgtttcaaaatgaatgttgtttaaagtttttacacacatattaagaaatgcattaattaaaagaaagagagatgttattttaccaaaatagcct 19451223  T
Q  232 aatcaattactggtttatttttcattaaagaaaaaataatactttggaagtagtgtatata 292  Q
    ||||||||| |||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  19451224 aatcaattattggtttgtttttcattaaagaaaaaataatactttggaagtagtgtatata 19451284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 135 - 308
Target Start/End: Complemental strand, 30261495 - 30261320
Alignment:
Q  135 ccctccgtttcaaaatgaatatcgtttaagatttttacacacatattaagaaatgcattaattnnnnnnn-ga-agatgttattttaccaaattatccta 232  Q
    ||||| |||||||||||||||||||||||  ||||||||||||||||||||||| ||||||||        || ||||||||||||||||||||||  ||    
T  30261495 ccctctgtttcaaaatgaatatcgtttaaagtttttacacacatattaagaaatacattaatttaaagaaagagagatgttattttaccaaattatttta 30261396  T
Q  233 atcaattactggtttatttttcattaaagaaaaaataatactttggaagtagtgtatataatattaactgaagggt 308  Q
    ||||| || |||||| ||||||||||||||||||||||||||||| ||||| |||||||| |||||| ||||||||    
T  30261395 atcaactattggtttgtttttcattaaagaaaaaataatactttgaaagtaatgtatatagtattaattgaagggt 30261320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 140 - 308
Target Start/End: Original strand, 6991188 - 6991358
Alignment:
Q  140 cgtttcaaaatgaatatcgtttaagatttttacacacatattaagaaatgcattaattnnnnnnngaagatgtt--attttaccaaattatcctaatcaa 237  Q
    ||||| ||||||||| ||||| ||| |||||| |||||||||||||||||||||||||         |||| ||  ||| ||||||||||||||| ||||    
T  6991188 cgttttaaaatgaatttcgttcaaggtttttatacacatattaagaaatgcattaattaaaagaaagagatattttattataccaaattatcctagtcaa 6991287  T
Q  238 ttactggtttatttttcattaaagaaaaaataatactttggaagtagtgtatataatattaactgaagggt 308  Q
     || |||||||||||| ||||||||||||||||||||||| || |||||||||||||||||||||||||||    
T  6991288 ctattggtttattttttattaaagaaaaaataatactttgaaaatagtgtatataatattaactgaagggt 6991358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 207 - 314
Target Start/End: Complemental strand, 52162266 - 52162159
Alignment:
Q  207 agatgttattttaccaaattatcctaatcaattactggtttatttttcattaaagaaaaaataatactttggaagtagtgtatataatattaactgaagg 306  Q
    ||||||||||||||||||||||| ||||||| || |||||| |||||||||||||||||||||||||||||||| |||||||| || |||||| ||||||    
T  52162266 agatgttattttaccaaattatcttaatcaaatattggtttgtttttcattaaagaaaaaataatactttggaactagtgtatttagtattaattgaagg 52162167  T
Q  307 gtgtaatt 314  Q
    || |||||    
T  52162166 gtataatt 52162159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 146 - 308
Target Start/End: Original strand, 10573085 - 10573250
Alignment:
Q  146 aaaatgaatatcgtttaagatttttacacacatattaagaaa-tgcattaattnnnnnnn-ga-agatgttattttaccaaattatcctaatcaattact 242  Q
    ||||||||| |||||||||||||||||||||||||||| ||| | ||||| ||        || ||||||||||||||||||||||||||||||| || |    
T  10573085 aaaatgaatgtcgtttaagatttttacacacatattaaaaaaatacattatttaaaagaaagagagatgttattttaccaaattatcctaatcaactatt 10573184  T
Q  243 ggtttatttttcattaaagaaaaaataatactttggaagtagtgtatataatattaactgaagggt 308  Q
    | |||  |||||||||| ||||||||||||||||||||||| |||||||| |||||| ||||||||    
T  10573185 gatttgattttcattaatgaaaaaataatactttggaagtattgtatatagtattaattgaagggt 10573250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 131 - 305
Target Start/End: Complemental strand, 41496445 - 41496269
Alignment:
Q  131 tactccctccgtttcaaaatgaatatcgtttaagatttttacacacatattaagaaatgcattaattnnnnnnngaaga--tgttattttaccaaattat 228  Q
    |||||| ||| ||| ||||||||||||||||||| |||||||||||||||||| ||||| |||||||         |||  |||||||| ||||||||||    
T  41496445 tactccttccattttaaaatgaatatcgtttaaggtttttacacacatattaaaaaatgtattaattaaaagaaatagaaatgttatttcaccaaattat 41496346  T
Q  229 cctaatcaattactggtttatttttcattaaagaaaaaataatactttggaagtagtgtatataatattaactgaag 305  Q
    ||||||||| || | |||| ||||| ||| ||||| |||||||| ||||| |||||||||||||||||||| |||||    
T  41496345 cctaatcaactatttgtttgttttttattgaagaataaataatattttgggagtagtgtatataatattaattgaag 41496269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 209 - 308
Target Start/End: Complemental strand, 11364386 - 11364287
Alignment:
Q  209 atgttattttaccaaattatcctaatcaattactggtttatttttcattaaagaaaaaataatactttggaagtagtgtatataatattaactgaagggt 308  Q
    ||||||||||||||||||||| |||| ||||| |||||| ||||||||| |||| |||||||||||||||||||||| ||||||||||||| ||||||||    
T  11364386 atgttattttaccaaattatcttaattaattattggtttgtttttcattgaagagaaaataatactttggaagtagtatatataatattaattgaagggt 11364287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 214 - 308
Target Start/End: Original strand, 52957791 - 52957886
Alignment:
Q  214 attttaccaaattatcctaatcaattactggtttatttttcattaaagaaaaaataatactttggaagtagtgt-atataatattaactgaagggt 308  Q
    |||||||||||||||||||||||| || |||||| ||||||||||||||||||||||||||||||||||||||| | |||||||||| ||||||||    
T  52957791 attttaccaaattatcctaatcaactattggtttgtttttcattaaagaaaaaataatactttggaagtagtgtaacataatattaattgaagggt 52957886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 140 - 299
Target Start/End: Complemental strand, 44651119 - 44650958
Alignment:
Q  140 cgtttcaaaatgaatatcgtttaagatttttacacacatattaagaaatgcattaattnnnnnnn-ga-agatgttattttaccaaattatcctaatcaa 237  Q
    ||||||||||| |||||||||||||||||||| ||||||||| |||||||||||||||        || | ||||||||||||||||||||| |||||      
T  44651119 cgtttcaaaataaatatcgtttaagatttttatacacatatttagaaatgcattaattaaaagaaagatatatgttattttaccaaattatcataatcgg 44651020  T
Q  238 ttactggtttatttttcattaaagaaaaaataatactttggaagtagtgtatataatattaa 299  Q
     || | ||||||||||||||||||| || |||||| |||| |||||||||||||| ||||||    
T  44651019 ctattagtttatttttcattaaagacaatataatattttgaaagtagtgtatatagtattaa 44650958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 214 - 308
Target Start/End: Original strand, 44571866 - 44571961
Alignment:
Q  214 attttaccaaattatcctaatcaattactggtttatttttcattaaagaaaaaataatactttggaagtagtgt-atataatattaactgaagggt 308  Q
    |||||||||||||||| ||||||| || |||||||||||||||||||||||||||||||||||||||||||||| | ||| |||||| ||||||||    
T  44571866 attttaccaaattatcttaatcaactattggtttatttttcattaaagaaaaaataatactttggaagtagtgtaacatattattaattgaagggt 44571961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 209 - 308
Target Start/End: Complemental strand, 50203234 - 50203135
Alignment:
Q  209 atgttattttaccaaattatcctaatcaattactggtttatttttcattaaagaaaaaataatactttggaagtagtgtatataatattaactgaagggt 308  Q
    ||||||||| ||||||||||| ||||||| || || ||| |||||||||||||||||||||||||||| |||||| ||||||||||||||| ||||||||    
T  50203234 atgttatttcaccaaattatcataatcaactattgatttgtttttcattaaagaaaaaataatacttttgaagtaatgtatataatattaattgaagggt 50203135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 214 - 308
Target Start/End: Original strand, 52848055 - 52848150
Alignment:
Q  214 attttaccaaattatcctaatcaattactggtttatttttcattaaagaaaaaataatactttggaagtagtgt-atataatattaactgaagggt 308  Q
    |||||||||||||||||||||||| || ||| || ||||||||||||||||||||||||||||||||||||||| | |||||||||| ||||||||    
T  52848055 attttaccaaattatcctaatcaactattggcttgtttttcattaaagaaaaaataatactttggaagtagtgtaacataatattaattgaagggt 52848150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 214 - 288
Target Start/End: Complemental strand, 19878804 - 19878730
Alignment:
Q  214 attttaccaaattatcctaatcaattactggtttatttttcattaaagaaaaaataatactttggaagtagtgta 288  Q
    |||||||||||||||||||||||| || |||||| ||||||||||||||||||||||||||||||||||||||||    
T  19878804 attttaccaaattatcctaatcaactattggtttgtttttcattaaagaaaaaataatactttggaagtagtgta 19878730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 214 - 315
Target Start/End: Complemental strand, 20448195 - 20448093
Alignment:
Q  214 attttaccaaattatcctaatcaattactggtttatttttcattaaagaaaaaataatactttggaagtagtgt-atataatattaactgaagggtgtaa 312  Q
    |||||||||||||||||||||||| || ||||||  |||||||||||||||||||||||||||||||||||||| | ||| |||||| |||||||| |||    
T  20448195 attttaccaaattatcctaatcaactattggtttgattttcattaaagaaaaaataatactttggaagtagtgtaacatagtattaattgaagggtataa 20448096  T
Q  313 ttg 315  Q
    |||    
T  20448095 ttg 20448093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 214 - 315
Target Start/End: Original strand, 41920310 - 41920412
Alignment:
Q  214 attttaccaaattatcctaatcaattactggtttatttttcattaaagaaaaaataatactttggaagtagt-gtatataatattaactgaagggtgtaa 312  Q
    ||||||||||||||| |||||||| || |||||| ||||||||||||||||||||||||||||||||||||| | | |||||||||| |||||||| |||    
T  41920310 attttaccaaattattctaatcaactattggtttgtttttcattaaagaaaaaataatactttggaagtagtggaacataatattaattgaagggtataa 41920409  T
Q  313 ttg 315  Q
    |||    
T  41920410 ttg 41920412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 131 - 304
Target Start/End: Original strand, 34413463 - 34413639
Alignment:
Q  131 tactccctccgtttcaaaatgaatatcgtttaagatttttacacacatattaagaaatgcattaattnnnnnnngaaga--tgttattttaccaaattat 228  Q
    |||||||||||||| ||||||||  ||||||||  |||||| ||||| |||||||||||| ||||||         |||  ||||||||||| |||||||    
T  34413463 tactccctccgttttaaaatgaacgtcgtttaatgtttttatacacaaattaagaaatgcgttaattaaaagaaagagaaatgttattttactaaattat 34413562  T
Q  229 cctaatcaattactggtttatttttcattaaag-aaaaaataatactttggaagtagtgtatataatattaactgaa 304  Q
     |||||||| || |||||  ||||||||||||| ||||||||||| ||| |||||||||||||||||||||| ||||    
T  34413563 gctaatcaactattggttcttttttcattaaagaaaaaaataatattttagaagtagtgtatataatattaattgaa 34413639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 131 - 288
Target Start/End: Complemental strand, 44061234 - 44061074
Alignment:
Q  131 tactccctccgtttcaaaatgaatatcgtttaagatttttacacacatattaagaaatgcattaattnnnnnnngaa--gatgttattttaccaaattat 228  Q
    |||||| ||||||| ||||||||| ||||||||| |||||| |||| ||||||||||||||||||||        ||  ||||||||||||| |||||||    
T  44061234 tactccatccgttttaaaatgaatgtcgtttaaggtttttatacacgtattaagaaatgcattaattaagagaaaaatagatgttattttactaaattat 44061135  T
Q  229 cctaatcaattactggtttatttttcattaaa-gaaaaaataatactttggaagtagtgta 288  Q
    | ||||||| || |||||| ||||||||||||  ||||||||||| |||| ||||||||||    
T  44061134 cataatcaactattggtttgtttttcattaaataaaaaaataatattttgcaagtagtgta 44061074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 214 - 308
Target Start/End: Complemental strand, 1819718 - 1819623
Alignment:
Q  214 attttaccaaattatcctaatcaattactggtttatttttcattaaagaaaaaataatactttggaagtagtgt-atataatattaactgaagggt 308  Q
    |||||||||||||||||||||||| || || ||||||||||||||||||||||||||||||||| ||||||||| | ||| |||||| ||||||||    
T  1819718 attttaccaaattatcctaatcaactattgatttatttttcattaaagaaaaaataatactttgaaagtagtgtaacatagtattaattgaagggt 1819623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 214 - 308
Target Start/End: Original strand, 2728399 - 2728494
Alignment:
Q  214 attttaccaaattatcctaatcaattactggtttatttttcattaaagaaaaaataatactttggaagtagtgt-atataatattaactgaagggt 308  Q
    |||||||||||||||||||||||| || |||| | ||||||||||||||||||||||||||||||||||||| | | ||| |||||||||||||||    
T  2728399 attttaccaaattatcctaatcaactattggtgtgtttttcattaaagaaaaaataatactttggaagtagtataacatagtattaactgaagggt 2728494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 207 - 305
Target Start/End: Complemental strand, 8971205 - 8971106
Alignment:
Q  207 agatgttattttaccaaattatcctaatcaattactggtttatttttcattaaagaa-aaaataatactttggaagtagtgtatataatattaactgaag 305  Q
    |||| |||||||||||||||||| |||| || || |||||| ||||||||||||||| ||||||||||||||||||||||||||||| |||||| |||||    
T  8971205 agattttattttaccaaattatcttaataaactattggtttgtttttcattaaagaaaaaaataatactttggaagtagtgtatatattattaattgaag 8971106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 214 - 308
Target Start/End: Complemental strand, 28734754 - 28734659
Alignment:
Q  214 attttaccaaattatcctaatcaattactggtttatttttcattaaagaaaaaataatactttggaagtagtgt-atataatattaactgaagggt 308  Q
    |||||| |||||||||||||||||||| |||||| ||||||||||||||||||||||||||||| ||||||||| | ||| |||||| ||||||||    
T  28734754 attttatcaaattatcctaatcaattattggtttgtttttcattaaagaaaaaataatactttgcaagtagtgtaacatagtattaattgaagggt 28734659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 214 - 308
Target Start/End: Original strand, 45043589 - 45043684
Alignment:
Q  214 attttaccaaattatcctaatcaattactggtttatttttcattaaagaaaaaataatactttggaagtagtgt-atataatattaactgaagggt 308  Q
    |||||||||||||||||||||||| || |||||| |||||||||||||||||||||||| |||||||||||||| | ||| |||||| ||||||||    
T  45043589 attttaccaaattatcctaatcaactattggtttgtttttcattaaagaaaaaataatattttggaagtagtgtaacatagtattaattgaagggt 45043684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 214 - 316
Target Start/End: Complemental strand, 49089619 - 49089516
Alignment:
Q  214 attttaccaaattatcctaatcaattactggtttatttttcattaaagaaaaaataatactttggaagtagtgt-atataatattaactgaagggtgtaa 312  Q
    ||||||| |||||||||||||||| || |||||| ||||||||||||||||||||||||||||||||||||||| | ||| || ||| |||||||| |||    
T  49089619 attttactaaattatcctaatcaactattggtttgtttttcattaaagaaaaaataatactttggaagtagtgtaacatagtactaattgaagggtataa 49089520  T
Q  313 ttgg 316  Q
    ||||    
T  49089519 ttgg 49089516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 214 - 308
Target Start/End: Original strand, 53814498 - 53814593
Alignment:
Q  214 attttaccaaattatcctaatcaattactggtttatttttcattaaagaaaaaataatactttggaagtagtgt-atataatattaactgaagggt 308  Q
    ||||||||||||||||||||||||||| || ||| ||||||||||||||||||||||||||||| ||||||||| | ||| |||||| ||||||||    
T  53814498 attttaccaaattatcctaatcaattattgatttgtttttcattaaagaaaaaataatactttgaaagtagtgtaacatagtattaattgaagggt 53814593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 212 - 304
Target Start/End: Complemental strand, 45839795 - 45839702
Alignment:
Q  212 ttattttaccaaattatcctaatcaattactggtttatttttcattaaagaa-aaaataatactttggaagtagtgtatataatattaactgaa 304  Q
    ||||||||||||||||||||||||||  | || ||| ||||||||||||||| |||||||||||||||||||| ||||||||||||||| ||||    
T  45839795 ttattttaccaaattatcctaatcaacaattgatttgtttttcattaaagaaaaaaataatactttggaagtaatgtatataatattaattgaa 45839702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 214 - 308
Target Start/End: Complemental strand, 37654566 - 37654470
Alignment:
Q  214 attttaccaaattatcctaatcaattactggtttattttt-cattaaagaaaaaataatactttggaagtagtgt-atataatattaactgaagggt 308  Q
    |||||||||||||||||||||||| || |||||| ||||| |||||||||||||||||||||||||||||||||| | ||| |||||| ||||||||    
T  37654566 attttaccaaattatcctaatcaactattggtttgttttttcattaaagaaaaaataatactttggaagtagtgtaacatagtattaattgaagggt 37654470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 154 - 304
Target Start/End: Original strand, 44868192 - 44868343
Alignment:
Q  154 tatcgtttaagatttttacacacatattaagaaatgcattaattnnnnnnngaaga--tgttattttaccaaattatcctaatcaattactggtttattt 251  Q
    ||||||||||| |||||||||||||||||||||||  |||||||        ||||  ||||||||||||||||| |||||||||| || || ||| |||    
T  44868192 tatcgtttaaggtttttacacacatattaagaaatatattaattaaaaaaa-aagaattgttattttaccaaattgtcctaatcaactattgatttgttt 44868290  T
Q  252 ttcattaaagaaaaaataatactttggaagtagtgtatataatattaactgaa 304  Q
    | ||||||||| ||||||||| |||||||||| |||||||| |||||| ||||    
T  44868291 tccattaaagataaaataatattttggaagtaatgtatatattattaattgaa 44868343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 138 - 305
Target Start/End: Original strand, 30779949 - 30780113
Alignment:
Q  138 tccgtttcaaaatgaatatcgtttaagatttttacacacatattaagaaatgcattaattnnnnnnngaagatgttattttaccaaattatcctaatcaa 237  Q
    ||||||| ||||| | | || ||||||||||| |||||||||||| |||||| |||||||        || |||||||||||| ||||||||||||||||    
T  30779949 tccgttttaaaataagtgtcatttaagatttt-acacacatattaggaaatgaattaattaaaaa---aaaatgttattttactaaattatcctaatcaa 30780044  T
Q  238 ttactggtttatttttcattaaag-aaaaaataatactttggaagtagtgtatataatattaactgaag 305  Q
     || || ||| ||||||||||||| |||||||||||||||| ||||||| | ||||||||||| |||||    
T  30780045 ctattgatttgtttttcattaaagaaaaaaataatactttgaaagtagtctttataatattaattgaag 30780113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 214 - 308
Target Start/End: Complemental strand, 34316378 - 34316283
Alignment:
Q  214 attttaccaaattatcctaatcaattactggtttatttttcattaaagaaaaaataatactttggaagtagtg-tatataatattaactgaagggt 308  Q
    |||||||||||||||||||||||| || || ||| |||||||||||||||| |||||| ||||||||||||||  |||||||||||| ||||||||    
T  34316378 attttaccaaattatcctaatcaactattgatttgtttttcattaaagaaagaataatcctttggaagtagtgcaatataatattaattgaagggt 34316283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 214 - 308
Target Start/End: Complemental strand, 42605728 - 42605633
Alignment:
Q  214 attttaccaaattatcctaatcaattactggtttatttttcattaaagaaaaaataatactttggaagtagtgt-atataatattaactgaagggt 308  Q
    |||||||||||||||| ||||||| || |||||| ||||||||||||||||||||||||||||| ||||| ||| | |||||||||| ||||||||    
T  42605728 attttaccaaattatcttaatcaactattggtttgtttttcattaaagaaaaaataatactttgaaagtaatgtaacataatattaattgaagggt 42605633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 214 - 308
Target Start/End: Original strand, 49080478 - 49080573
Alignment:
Q  214 attttaccaaattatcctaatcaattactggtttatttttcattaaagaaaaaataatactttggaagtagtgt-atataatattaactgaagggt 308  Q
    |||||||||||||||| ||||||| || || ||| ||||||||||||||||||||||||||| ||||||||||| | |||||||||| ||||||||    
T  49080478 attttaccaaattatcataatcaactattgatttgtttttcattaaagaaaaaataatacttcggaagtagtgtaacataatattaattgaagggt 49080573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 214 - 308
Target Start/End: Complemental strand, 52254004 - 52253909
Alignment:
Q  214 attttaccaaattatcctaatcaattactggtttatttttcattaaagaaaaaataatactttggaagtagt-gtatataatattaactgaagggt 308  Q
    |||||||||||||||||||||||| || |||| | ||||||||||||||||||||||||| ||||||||||| | | |||||||||| ||||||||    
T  52254004 attttaccaaattatcctaatcaactattggtctgtttttcattaaagaaaaaataataccttggaagtagtggaacataatattaattgaagggt 52253909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 214 - 308
Target Start/End: Original strand, 56373576 - 56373673
Alignment:
Q  214 attttaccaaattatcctaatcaattactggtttatttttcattaaagaaaaaataatactttggaagtagtgt---atataatattaactgaagggt 308  Q
    ||||||||||||||||||||||||  | |  ||| |||||||||||||||||||||||||||||||||||||||   |||||||||||| ||||||||    
T  56373576 attttaccaaattatcctaatcaacaattattttgtttttcattaaagaaaaaataatactttggaagtagtgtaacatataatattaattgaagggt 56373673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 214 - 288
Target Start/End: Complemental strand, 29370759 - 29370686
Alignment:
Q  214 attttaccaaattatcctaatcaattactggtttatttttcattaaagaaaaaataatactttggaagtagtgta 288  Q
    |||||||||||||||||||||||| || |||||| |||||||||||||| |||||||||||||||||||||||||    
T  29370759 attttaccaaattatcctaatcaactattggtttgtttttcattaaaga-aaaataatactttggaagtagtgta 29370686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 209 - 315
Target Start/End: Original strand, 46392059 - 46392164
Alignment:
Q  209 atgttattttaccaaattatcctaatcaattactggtttatttttcattaaagaaaaaataatactttggaagtagtgtatataatattaactgaagggt 308  Q
    |||| |||||||||||||||||||||||| || |||||| ||||  |||||| ||||||||||||||||||||||||||| || ||||||| |||| |||    
T  46392059 atgtaattttaccaaattatcctaatcaactattggtttgttttctattaaataaaaaataatactttggaagtagtgtaaat-atattaattgaaaggt 46392157  T
Q  309 gtaattg 315  Q
     ||||||    
T  46392158 ataattg 46392164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 214 - 308
Target Start/End: Complemental strand, 19930870 - 19930775
Alignment:
Q  214 attttaccaaattatcctaatcaattactggtttatttttcattaaagaaaaaataatactttggaagtagtgt-atataatattaactgaagggt 308  Q
    |||||| ||||||||| ||||||| || |||||| ||||||||||||| |||||||||| |||||||||||||| | |||||||||| ||||||||    
T  19930870 attttatcaaattatcttaatcaactattggtttgtttttcattaaaggaaaaataatattttggaagtagtgtaacataatattaattgaagggt 19930775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 214 - 308
Target Start/End: Complemental strand, 27653830 - 27653735
Alignment:
Q  214 attttaccaaattatcctaatcaattactggtttatttttcattaaagaaaaaataatactttggaagtagtgt-atataatattaactgaagggt 308  Q
    |||||||||||||||||||||||| || ||  || |||||||||||||||||||||||| |||||||||||||| | ||| |||||| ||||||||    
T  27653830 attttaccaaattatcctaatcaactattgagttgtttttcattaaagaaaaaataatattttggaagtagtgtaacatagtattaattgaagggt 27653735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 214 - 308
Target Start/End: Original strand, 40345348 - 40345443
Alignment:
Q  214 attttaccaaattatcctaatcaattactggtttatttttcattaaagaaaaaataatactttggaagtagtgt-atataatattaactgaagggt 308  Q
    |||||||||||||||||||||||| || |||||| ||||| ||||||||||| | ||||||||||||||||||| | ||| |||||| ||||||||    
T  40345348 attttaccaaattatcctaatcaactattggtttgttttttattaaagaaaatacaatactttggaagtagtgtaacatagtattaattgaagggt 40345443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 146 - 304
Target Start/End: Original strand, 47458319 - 47458477
Alignment:
Q  146 aaaatgaatatcgtttaagatttttacacacatattaagaaatgcattaattnnnnnnn-ga-agatgttattttaccaaattatcctaatcaattactg 243  Q
    ||||| ||||||||| |||||||||||||||||||||| |||| ||||||||        || ||||||||||||||||||||||||||||||| ||       
T  47458319 aaaataaatatcgtt-aagatttttacacacatattaaaaaatacattaattaaaagaaagacagatgttattttaccaaattatcctaatcaactatat 47458417  T
Q  244 gtttatttttcattaaagaaaaaataatactttggaagtagtgtatataatattaactgaa 304  Q
    |||| |||||| |||||| ||||||||||||||  ||||| |||||||| |||||| ||||    
T  47458418 gtttgtttttcgttaaag-aaaaataatactttaaaagtaatgtatatagtattaattgaa 47458477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 214 - 315
Target Start/End: Complemental strand, 50623240 - 50623137
Alignment:
Q  214 attttaccaaattatcctaatcaattactggtttatttttcattaaagaa-aaaataatactttggaagtagtgt-atataatattaactgaagggtgta 311  Q
    |||||| ||||||||||||||||| || |||||| ||||||||||||||| ||||||||||||| |||||||||| | || ||||||| |||||||| ||    
T  50623240 attttatcaaattatcctaatcaactattggtttgtttttcattaaagaaaaaaataatactttagaagtagtgtaacattatattaattgaagggtata 50623141  T
Q  312 attg 315  Q
    ||||    
T  50623140 attg 50623137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 214 - 288
Target Start/End: Original strand, 54042184 - 54042258
Alignment:
Q  214 attttaccaaattatcctaatcaattactggtttatttttcattaaagaaaaaataatactttggaagtagtgta 288  Q
    |||||| ||||||||| ||||||| || |||||| |||||||||||||||| |||||||||||||||||||||||    
T  54042184 attttatcaaattatcataatcaactattggtttgtttttcattaaagaaataataatactttggaagtagtgta 54042258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 214 - 305
Target Start/End: Original strand, 38991764 - 38991854
Alignment:
Q  214 attttaccaaattatcctaatcaattactggtttatttttcattaaagaaaaaataatactttggaagtagtgt-atataatattaactgaag 305  Q
    |||||||||||||||||||||||| |  |||||| ||||||||| ||||||||||||||||||| ||||||||| | |||||||||| |||||    
T  38991764 attttaccaaattatcctaatcaaat--tggtttgtttttcattcaagaaaaaataatactttgaaagtagtgtaacataatattaattgaag 38991854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 130 - 308
Target Start/End: Original strand, 620091 - 620273
Alignment:
Q  130 atactccctccgtttcaaaatgaatatcgtttaagatttttacacacatattaagaaatgcattaattnnnnnnngaaga--tgttattttaccaaatta 227  Q
    ||||||||||| ||||||||| | | ||||||||| |||||||||| ||||||| ||||  ||| |||       | |||  ||||||||||||||||||    
T  620091 atactccctccttttcaaaataattgtcgtttaaggtttttacacatatattaaaaaatatatttattaaaagaaggagagatgttattttaccaaatta 620190  T
Q  228 tcctaatcaattactggtttatttttcattaaag--aaaaaataatactttggaagtagtgtatataatattaactgaagggt 308  Q
    |  ||||||| || || ||| |||||| |||||   |||||||||||||||||||||| |||||| | |||||| ||||||||    
T  620191 ttttaatcaactattgatttgtttttctttaaaagaaaaaaataatactttggaagtaatgtatagagtattaattgaagggt 620273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 214 - 308
Target Start/End: Complemental strand, 24941036 - 24940940
Alignment:
Q  214 attttaccaaattatcctaatcaattactggtttatttttcattaaagaa-aaaataatactttggaagtagtgt-atataatattaactgaagggt 308  Q
    |||||||||||||||||||||||| || |||||| ||||||||||||||| ||||||||| |||  ||||||||| | ||| |||||| ||||||||    
T  24941036 attttaccaaattatcctaatcaactattggtttgtttttcattaaagaaaaaaataatatttttaaagtagtgtaacatagtattaattgaagggt 24940940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 214 - 308
Target Start/End: Complemental strand, 2493258 - 2493163
Alignment:
Q  214 attttaccaaattatcctaatcaattactggtttatttttcattaaagaaaaaataatactttggaagtagtgt-atataatattaactgaagggt 308  Q
    ||||||||| |||||||||||||| || ||| || ||||||||||||||||| ||||||| ||||||||| ||| | ||| |||||| ||||||||    
T  2493258 attttaccagattatcctaatcaactattgggttgtttttcattaaagaaaagataataccttggaagtaatgtaacatagtattaattgaagggt 2493163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 214 - 308
Target Start/End: Complemental strand, 18430145 - 18430050
Alignment:
Q  214 attttaccaaattatcctaatcaattactggtttatttttcattaaagaaaaaataatactttggaagtagtgt-atataatattaactgaagggt 308  Q
    |||||||||||||||| ||||||| || | |||| |||||| |||||||||||||||||||| | ||||||||| | ||| |||||| ||||||||    
T  18430145 attttaccaaattatcataatcaactattcgtttgtttttctttaaagaaaaaataatacttagaaagtagtgtaacatagtattaattgaagggt 18430050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 212 - 298
Target Start/End: Complemental strand, 56460243 - 56460156
Alignment:
Q  212 ttattttaccaaattatcctaatcaattactggtttatttttcattaaa-gaaaaaataatactttggaagtagtgtatataatatta 298  Q
    ||||||||| ||||||| |||||||  ||   |||| |||||||||||| |||||||||||| |||||||||||||||||||||||||    
T  56460243 ttattttactaaattattctaatcagctataagtttgtttttcattaaaagaaaaaataatattttggaagtagtgtatataatatta 56460156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 214 - 288
Target Start/End: Original strand, 29519526 - 29519600
Alignment:
Q  214 attttaccaaattatcctaatcaattactggtttatttttcattaaagaaaaaataatactttggaagtagtgta 288  Q
    ||||||||||||||  ||||| || || |||||  |||||||||||||||||||||||||||| |||||||||||    
T  29519526 attttaccaaattactctaataaactattggttcgtttttcattaaagaaaaaataatactttagaagtagtgta 29519600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 214 - 288
Target Start/End: Complemental strand, 39984973 - 39984899
Alignment:
Q  214 attttaccaaattatcctaatcaattactggtttatttttcattaaagaaaaaataatactttggaagtagtgta 288  Q
    |||||| |||||||| |||||||| || || ||| |||||||||||||||| ||| |||||||||||||||||||    
T  39984973 attttatcaaattattctaatcaactattgatttgtttttcattaaagaaacaattatactttggaagtagtgta 39984899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 146 - 267
Target Start/End: Original strand, 19903143 - 19903257
Alignment:
Q  146 aaaatgaatatcgtttaagatttttacacacatattaagaaatgcattaattnnnnnnngaagatgttattttaccaaattatcctaatcaattactggt 245  Q
    ||||||||||||||| |||||||| ||||||||||||| |||||||||||||        || |||||||||||| ||||||||  ||| || || ||||    
T  19903143 aaaatgaatatcgtt-aagatttt-acacacatattaaaaaatgcattaattaaa-----aaaatgttattttacaaaattatctgaataaactattggt 19903235  T
Q  246 ttatttttcattaaagaaaaaa 267  Q
    || |||||||||||||||||||    
T  19903236 ttgtttttcattaaagaaaaaa 19903257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 249 - 308
Target Start/End: Original strand, 25123763 - 25123822
Alignment:
Q  249 tttttcattaaagaaaaaataatactttggaagtagtgtatataatattaactgaagggt 308  Q
    |||||| ||||||||||||||||| ||||||||| ||||||||| |||||| ||||||||    
T  25123763 tttttctttaaagaaaaaataatattttggaagtcgtgtatatagtattaattgaagggt 25123822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 130 - 191
Target Start/End: Original strand, 7905922 - 7905983
Alignment:
Q  130 atactccctccgtttcaaaatgaatatcgtttaagatttttacacacatattaagaaatgca 191  Q
    ||||||||||||||| ||||||| | |||||| || | ||||||||||||||||||||||||    
T  7905922 atactccctccgttttaaaatgagtgtcgttttaggtgtttacacacatattaagaaatgca 7905983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 142 - 189
Target Start/End: Original strand, 12241338 - 12241385
Alignment:
Q  142 tttcaaaatgaatatcgtttaagatttttacacacatattaagaaatg 189  Q
    ||||| ||||||||||||||||| || |||||||||||||||||||||    
T  12241338 tttcacaatgaatatcgtttaaggttgttacacacatattaagaaatg 12241385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 138 - 191
Target Start/End: Original strand, 22220293 - 22220346
Alignment:
Q  138 tccgtttcaaaatgaatatcgtttaagatttttacacacatattaagaaatgca 191  Q
    ||||||||||||||| | |||||| || | ||||||||||||||||||||||||    
T  22220293 tccgtttcaaaatgagtgtcgttttaggtctttacacacatattaagaaatgca 22220346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 126 - 191
Target Start/End: Complemental strand, 30106481 - 30106416
Alignment:
Q  126 tcatatactccctccgtttcaaaatgaatatcgtttaagatttttacacacatattaagaaatgca 191  Q
    |||||||||||||||||||  |||||| | || |||||| ||| || |||||||||||||||||||    
T  30106481 tcatatactccctccgtttggaaatgagtgtcctttaaggtttctagacacatattaagaaatgca 30106416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 130 - 191
Target Start/End: Original strand, 38510171 - 38510232
Alignment:
Q  130 atactccctccgtttcaaaatgaatatcgtttaagatttttacacacatattaagaaatgca 191  Q
    ||||||| ||||||| ||||||| | |||||| |||| |||||||||||||||| |||||||    
T  38510171 atactccatccgttttaaaatgagtgtcgttttagatctttacacacatattaaaaaatgca 38510232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 131 - 191
Target Start/End: Complemental strand, 4505566 - 4505506
Alignment:
Q  131 tactccctccgtttcaaaatgaatatcgtttaagatttttacacacatattaagaaatgca 191  Q
    |||||||||||||||||||||| |  ||||| || | |||||| |||||||||||||||||    
T  4505566 tactccctccgtttcaaaatgagtgccgttttaggtgtttacaaacatattaagaaatgca 4505506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 131 - 191
Target Start/End: Complemental strand, 25231405 - 25231345
Alignment:
Q  131 tactccctccgtttcaaaatgaatatcgtttaagatttttacacacatattaagaaatgca 191  Q
    |||| |||||||||||| |||| | |||||| || | ||||||||||||||||||||||||    
T  25231405 tacttcctccgtttcaatatgagtgtcgttttaggtgtttacacacatattaagaaatgca 25231345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 215 - 288
Target Start/End: Complemental strand, 40837287 - 40837212
Alignment:
Q  215 ttttaccaaattatcctaatcaattactggtttatttttcattaaagaaaaaataat--actttggaagtagtgta 288  Q
    ||||||||||||||| |||||| | | || ||| ||||||||||||||||||| |||  | |||||||||||||||    
T  40837287 ttttaccaaattatcttaatcactcattgatttgtttttcattaaagaaaaaaaaataaaatttggaagtagtgta 40837212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 130 - 189
Target Start/End: Complemental strand, 6510355 - 6510296
Alignment:
Q  130 atactccctccgtttcaaaatgaatatcgtttaagatttttacacacatattaagaaatg 189  Q
    ||||||||| ||||||| ||||||| |||||||||||||| ||||| | ||||| |||||    
T  6510355 atactcccttcgtttcacaatgaatgtcgtttaagattttgacacatagattaaaaaatg 6510296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 131 - 194
Target Start/End: Complemental strand, 24157362 - 24157299
Alignment:
Q  131 tactccctccgtttcaaaatgaatatcgtttaagatttttacacacatattaagaaatgcatta 194  Q
    ||||| ||| |||| ||||||||| ||||||||  |||||||||||||||||| || |||||||    
T  24157362 tactctctctgttttaaaatgaatgtcgtttaaagtttttacacacatattaaaaagtgcatta 24157299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 130 - 191
Target Start/End: Original strand, 36558217 - 36558276
Alignment:
Q  130 atactccctccgtttcaaaatgaatatcgtttaagatttttacacacatattaagaaatgca 191  Q
    ||||||| || |||||||||||||  ||||||||| |||||||||||  |||||||||||||    
T  36558217 atactccttcagtttcaaaatgaaggtcgtttaaggtttttacacac--attaagaaatgca 36558276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 129 - 191
Target Start/End: Complemental strand, 37624788 - 37624726
Alignment:
Q  129 tatactccctccgtttcaaaatgaatatcgtttaagatttttacacacatattaagaaatgca 191  Q
    |||||||| ||||||| ||||||| | |||||| || | ||||||| ||||||||||||||||    
T  37624788 tatactccatccgttttaaaatgagtgtcgttttaggtgtttacactcatattaagaaatgca 37624726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 28 - 109
Target Start/End: Original strand, 51991514 - 51991596
Alignment:
Q  28 aaatttgatttaatcgaaataatttaactttaca-tttgcagaaattaccgatcatggctaaagtaaatatatttgtggtata 109  Q
    ||||||||||| ||||||| ||||||||||| || ||| ||| || |||| ||||||||||  |||||||  |||||||||||    
T  51991514 aaatttgatttgatcgaaagaatttaacttttcatttttcaggaaatacctatcatggctagtgtaaatacctttgtggtata 51991596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 136 - 189
Target Start/End: Original strand, 1019027 - 1019080
Alignment:
Q  136 cctccgtttcaaaatgaatatcgtttaagatttttacacacatattaagaaatg 189  Q
    ||||| ||||||||||| | ||||||||| |||||||||||| ||| |||||||    
T  1019027 cctccctttcaaaatgagtgtcgtttaaggtttttacacacaaatttagaaatg 1019080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 210 - 287
Target Start/End: Original strand, 9809621 - 9809698
Alignment:
Q  210 tgttattttaccaaattatcctaatcaattactggtttatttttcattaaagaaaaaataatactttggaagtagtgt 287  Q
    |||||||||| |||||||||||  | | ||| |||||  |||| | |||||| ||||||||||||||| |||||||||    
T  9809621 tgttattttatcaaattatccttgttatttattggttagttttcctttaaagtaaaaataatactttgaaagtagtgt 9809698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #68
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 278 - 315
Target Start/End: Original strand, 27943611 - 27943648
Alignment:
Q  278 gaagtagtgtatataatattaactgaagggtgtaattg 315  Q
    |||||||||||||||||||||| |||||||| ||||||    
T  27943611 gaagtagtgtatataatattaattgaagggtataattg 27943648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #69
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 140 - 189
Target Start/End: Complemental strand, 50203305 - 50203256
Alignment:
Q  140 cgtttcaaaatgaatatcgtttaagatttttacacacatattaagaaatg 189  Q
    |||| |||||||||| | ||||||| ||||||| ||||||||||||||||    
T  50203305 cgttacaaaatgaatgttgtttaaggtttttacgcacatattaagaaatg 50203256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #70
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 130 - 191
Target Start/End: Original strand, 51733421 - 51733481
Alignment:
Q  130 atactccctccgtttcaaaatgaatatcgtttaagatttttacacacatattaagaaatgca 191  Q
    |||||| || ||||||||||||||| |||||| || | |||| |||||||||||||||||||    
T  51733421 atactctcttcgtttcaaaatgaatgtcgttttaggtgttta-acacatattaagaaatgca 51733481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #71
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 126 - 154
Target Start/End: Complemental strand, 19878894 - 19878866
Alignment:
Q  126 tcatatactccctccgtttcaaaatgaat 154  Q
    |||||||||||||||||||||||||||||    
T  19878894 tcatatactccctccgtttcaaaatgaat 19878866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #72
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 149 - 197
Target Start/End: Original strand, 25123557 - 25123605
Alignment:
Q  149 atgaatatcgtttaagatttttacacacatattaagaaatgcattaatt 197  Q
    |||||||| |||||||||||||||| | ||||||| |||| ||||||||    
T  25123557 atgaatattgtttaagatttttacataaatattaaaaaatacattaatt 25123605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #73
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 136 - 188
Target Start/End: Original strand, 52915474 - 52915526
Alignment:
Q  136 cctccgtttcaaaatgaatatcgtttaagatttttacacacatattaagaaat 188  Q
    ||||||||||||||||| | |||||| || | |||| ||||||||||||||||    
T  52915474 cctccgtttcaaaatgagtgtcgttttaggtctttatacacatattaagaaat 52915526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 86; Significance: 4e-41; HSPs: 44)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 130 - 315
Target Start/End: Original strand, 3988656 - 3988842
Alignment:
Q  130 atactccctccgtttcaaaatgaatatcgtttaagatttttacacacatattaagaaatgcattaattnnnnnnnga-agatgttattttaccaaattat 228  Q
    |||||||||| |||| ||||||||| |||||||||||||||||||||||||| |||||||||| | |        || ||||||||||||||||||||||    
T  3988656 atactccctctgttttaaaatgaatgtcgtttaagatttttacacacatattgagaaatgcataattaaaagaaagagagatgttattttaccaaattat 3988755  T
Q  229 cctaatcaattactggtttatttttcattaaagaaaaaataatactttggaagtagtgtatataatattaactgaagggtgtaattg 315  Q
    | ||||||| || | |||| |||||||||||||||||||||||||||| ||| |||| |||||| |||||| |||||||| ||||||    
T  3988756 cataatcaactatttgtttgtttttcattaaagaaaaaataatacttttgaaatagtatatatagtattaattgaagggtataattg 3988842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 129 - 315
Target Start/End: Original strand, 12459229 - 12459417
Alignment:
Q  129 tatactccctccgtttcaaaatgaatatcgtttaagatttttacacacatattaagaaatgcattaattnnnnnnng--aagatgttattttaccaaatt 226  Q
    |||||| ||||||||| ||||||||| | ||||||| |||||||||||||| |||||||| ||||||||          ||||| |||||||||||||||    
T  12459229 tatacttcctccgtttaaaaatgaatgttgtttaaggtttttacacacatactaagaaatacattaattaaaagaaagaaagatattattttaccaaatt 12459328  T
Q  227 atcctaatcaattactggtttatttttcattaaagaaaaaataatactttggaagtagtgtatataatattaactgaagggtgtaattg 315  Q
    ||||||||||| || |||| | ||||||||||||||||||| ||||||||||||||| |||||||| |||||| |||||||| ||||||    
T  12459329 atcctaatcaactattggtctgtttttcattaaagaaaaaacaatactttggaagtaatgtatatagtattaattgaagggtataattg 12459417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 130 - 304
Target Start/End: Original strand, 1502664 - 1502840
Alignment:
Q  130 atactccctccgtttcaaaatgaatatcgtttaagatttttacacacatattaagaaatgcattaattnnnnnnngaaga--tgttattttaccaaatta 227  Q
    ||||||| |||||||||||||||||||||| ||||||||||||| ||||| ||||||||||||| |||         |||  ||||||||||||||||||    
T  1502664 atactccttccgtttcaaaatgaatatcgtctaagatttttacatacataataagaaatgcattgattaaaagaaatagagatgttattttaccaaatta 1502763  T
Q  228 tcctaatcaattactggtttatttttcattaaagaaaaaataatactttggaagtagtgtatataatattaactgaa 304  Q
    || |||| || || |||||| |||||||||||| ||||||||||| ||||||||||||||||||| |||||| ||||    
T  1502764 tcttaattaactattggtttgtttttcattaaataaaaaataatattttggaagtagtgtatatagtattaattgaa 1502840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 131 - 304
Target Start/End: Original strand, 13011260 - 13011432
Alignment:
Q  131 tactccctccgtttcaaaatgaatatcgtttaagatttttacacacatattaagaaatgcattaatt-nnnnnnnga-agatgttattttaccaaattat 228  Q
    ||||||||| |||||||||||||  ||||||||||||||||||||||||||||||||||||||||||        || ||||||||||||||||||||||    
T  13011260 tactccctctgtttcaaaatgaacgtcgtttaagatttttacacacatattaagaaatgcattaattaaaagaaagagagatgttattttaccaaattat 13011359  T
Q  229 cctaatcaattactggtttatttttcattaaagaaaaaataatactttggaagtagtgtatataatattaactgaa 304  Q
    | ||||||| ||  ||||| |||||||||||||||||   ||||||||| |||||||||||||| |||||| ||||    
T  13011360 cttaatcaactatcggtttgtttttcattaaagaaaa---aatactttgaaagtagtgtatatagtattaattgaa 13011432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 207 - 308
Target Start/End: Complemental strand, 9940810 - 9940709
Alignment:
Q  207 agatgttattttaccaaattatcctaatcaattactggtttatttttcattaaagaaaaaataatactttggaagtagtgtatataatattaactgaagg 306  Q
    ||||||||||||||||||||||||||||||| || |||||| |||||||||||||||||||||||| |||||||||||||| ||||||||||| ||||||    
T  9940810 agatgttattttaccaaattatcctaatcaactattggtttgtttttcattaaagaaaaaataatattttggaagtagtgtgtataatattaattgaagg 9940711  T
Q  307 gt 308  Q
    ||    
T  9940710 gt 9940709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 131 - 299
Target Start/End: Original strand, 21271315 - 21271484
Alignment:
Q  131 tactccctccgtttcaaaatgaatatcgtttaagatttttacacacatattaagaaatgcattaattnnnnnnn-ga-agatgttattttaccaaattat 228  Q
    ||||||||| |||||||||||||| ||||||||| ||||||||||||||||||||||||||||| ||        || |||||||||||||||||| |||    
T  21271315 tactccctctgtttcaaaatgaatgtcgtttaaggtttttacacacatattaagaaatgcattatttaaaataaagagagatgttattttaccaaagtat 21271414  T
Q  229 cctaatcaattactggtttatttttcattaaagaaaaaataatactttggaagtagtgtatataatattaa 299  Q
    ||||||||| || || ||| || |||||||||| |||||||||| ||||||||||| ||||||||||||||    
T  21271415 cctaatcaactattgatttgttcttcattaaag-aaaaataataatttggaagtagagtatataatattaa 21271484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 209 - 315
Target Start/End: Complemental strand, 577222 - 577115
Alignment:
Q  209 atgttattttaccaaattatcctaatcaattactggtttatttttcattaaagaa-aaaataatactttggaagtagtgtatataatattaactgaaggg 307  Q
    |||||||||||| |||||||||||||||| || |||||| ||||||||||||||| ||||||||| |||||||||||||||||||||||||| |||||||    
T  577222 atgttattttactaaattatcctaatcaactattggtttgtttttcattaaagaaaaaaataataatttggaagtagtgtatataatattaattgaaggg 577123  T
Q  308 tgtaattg 315  Q
    | ||||||    
T  577122 tataattg 577115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 131 - 289
Target Start/End: Original strand, 20226133 - 20226293
Alignment:
Q  131 tactccctccgtttcaaaatgaatatcgtttaagatttttacacacatattaagaaatgcattaattnnnnnnn-ga-agatgttattttaccaaattat 228  Q
    |||||| ||| ||||||||||||| ||||||||| ||||| |||| |||||||||||||||||||||        || ||||||||||||||||||||||    
T  20226133 tactccttccctttcaaaatgaatgtcgtttaaggtttttccacatatattaagaaatgcattaatttaaagaaagagagatgttattttaccaaattat 20226232  T
Q  229 cctaatcaattactggtttatttttcattaaagaaaaaataatactttggaagtagtgtat 289  Q
     |||||||| || || ||| ||||||||||||||| ||||||||| |||||||||||||||    
T  20226233 actaatcaactattgatttgtttttcattaaagaataaataatacattggaagtagtgtat 20226293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 131 - 289
Target Start/End: Original strand, 22120117 - 22120277
Alignment:
Q  131 tactccctccgtttcaaaatgaatatcgtttaagatttttacacacatattaagaaatgcattaattnnnnnnn-ga-agatgttattttaccaaattat 228  Q
    |||||| ||| ||||||||||||| ||||||||| ||||| |||| |||||||||||||||||||||        || ||||||||||||||||||||||    
T  22120117 tactccttccctttcaaaatgaatgtcgtttaaggtttttccacatatattaagaaatgcattaatttaaagaaagagagatgttattttaccaaattat 22120216  T
Q  229 cctaatcaattactggtttatttttcattaaagaaaaaataatactttggaagtagtgtat 289  Q
     |||||||| || || ||| ||||||||||||||| ||||||||| |||||||||||||||    
T  22120217 actaatcaactattgatttgtttttcattaaagaataaataatacattggaagtagtgtat 22120277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 141 - 292
Target Start/End: Original strand, 13503766 - 13503920
Alignment:
Q  141 gtttcaaaatgaatatcgtttaagatttttacacacatattaagaaatgcattaattnnnnnnngaag--atgttattttaccaaattatcctaatcaat 238  Q
    |||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||         ||  |||||||||||||||||||||||||| ||     
T  13503766 gtttcaaaataaatgtcgtttaagatttttacacacatattaagaaatgcattaattaaaagaaagagaaatgttattttaccaaattatcctaataaac 13503865  T
Q  239 tactggtttatttttcattaaag--aaaaaataatactttggaagtagtgtatata 292  Q
    || | |||| |||||||||||||  |||||||||||||||| ||||||||||||||    
T  13503866 ta-ttgtttgtttttcattaaagaaaaaaaataatactttgaaagtagtgtatata 13503920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 130 - 304
Target Start/End: Complemental strand, 17828523 - 17828348
Alignment:
Q  130 atactccctccgtttcaaaatgaatatcgtttaagatttttacacacatattaagaaatgcattaattnnnnnnng--aagatgttattttaccaaatta 227  Q
    |||||||||| |||||||| | ||| | ||||||| ||| |||||||| |||||||||||||||||||          ||||||||||||||||||||||    
T  17828523 atactccctctgtttcaaa-taaatgtagtttaaggtttctacacacaaattaagaaatgcattaattaaaagaaagaaagatgttattttaccaaatta 17828425  T
Q  228 tcctaatcaattactggtttatttttcattaaagaaaaaataatactttggaagtagtgtatataatattaactgaa 304  Q
    || |||||||  | |||||| |||||||||||||||||| |||||||||| ||| |||||||||| |||||| ||||    
T  17828424 tcttaatcaaccattggtttgtttttcattaaagaaaaagtaatactttgaaagaagtgtatatagtattaattgaa 17828348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 214 - 308
Target Start/End: Complemental strand, 234190 - 234095
Alignment:
Q  214 attttaccaaattatcctaatcaattactggtttatttttcattaaagaaaaaataatactttggaagtagtgt-atataatattaactgaagggt 308  Q
    |||||||||||||||||||||||| || |||||| ||||||||||||||||||||||||||||||||||||||| | ||| |||||| ||||||||    
T  234190 attttaccaaattatcctaatcaactattggtttgtttttcattaaagaaaaaataatactttggaagtagtgtaacatagtattaattgaagggt 234095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 138 - 299
Target Start/End: Original strand, 17552166 - 17552330
Alignment:
Q  138 tccgtttcaaaatgaatatcgtttaagatttttacacacatattaagaaatgcattaattnnnnnnn-ga-agatgttattttaccaaattatcctaatc 235  Q
    ||||||||||||||||| |||||| |  |||||||||||| ||||| |||| ||||||||        || |||||| ||||||||||||||||||||||    
T  17552166 tccgtttcaaaatgaatgtcgttttaagtttttacacacagattaaaaaatacattaattaaaagaaagagagatgtaattttaccaaattatcctaatc 17552265  T
Q  236 aattactggtttatttttcattaaag-aaaaaataatactttggaagtagtgtatataatattaa 299  Q
    ||  | |||||| ||||||||||||| ||||||||||| ||||||||||||||||||| ||||||    
T  17552266 aacaattggtttgtttttcattaaagaaaaaaataatattttggaagtagtgtatatagtattaa 17552330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 207 - 315
Target Start/End: Original strand, 12322874 - 12322985
Alignment:
Q  207 agatgttattttaccaaattatcctaatcaattactg---gtttatttttcattaaagaaaaaataatactttggaagtagtgtatataatattaactga 303  Q
    |||||||||||||||||||||||||||| || || ||    ||| ||||||||||||||||| | |||||||||||||||||||||||| |||||| |||    
T  12322874 agatgttattttaccaaattatcctaattaactattgattttttttttttcattaaagaaaacacaatactttggaagtagtgtatatagtattaattga 12322973  T
Q  304 agggtgtaattg 315  Q
    |||||| |||||    
T  12322974 agggtgcaattg 12322985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 214 - 308
Target Start/End: Complemental strand, 1135081 - 1134986
Alignment:
Q  214 attttaccaaattatcctaatcaattactggtttatttttcattaaagaaaaaataatactttggaagtagtgt-atataatattaactgaagggt 308  Q
    |||||||||||||||||||||||| || | |||| |||||| ||||||||||||||||| |||||||||||||| ||||| |||||| ||||||||    
T  1135081 attttaccaaattatcctaatcaactatttgtttgtttttctttaaagaaaaaataatattttggaagtagtgtaatatagtattaattgaagggt 1134986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 129 - 304
Target Start/End: Original strand, 16127920 - 16128094
Alignment:
Q  129 tatactccctccgtttcaaaatgaatatcgtttaagatttttacacacatattaagaaatgcattaattnnnnnnngaagatgttattttaccaaattat 228  Q
    |||||||  |||||||||| || ||| | ||||||  |||||||| | |||||||||||||||||||||         | || |||||| | ||| ||||    
T  16127920 tatactctttccgtttcaacataaatgtggtttaaagtttttacatatatattaagaaatgcattaattaaaagaaatatattttattt-atcaatttat 16128018  T
Q  229 cctaatcaattactggtttatttttcattaaagaaaaaataatactttggaagtagtgtatataatattaactgaa 304  Q
    ||||||||| ||  ||||| |||||||||||||||||||||||||||| ||||||||||||||| |||||| ||||    
T  16128019 cctaatcaactatcggtttgtttttcattaaagaaaaaataatacttttgaagtagtgtatatagtattaattgaa 16128094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 214 - 308
Target Start/End: Original strand, 23259322 - 23259417
Alignment:
Q  214 attttaccaaattatcctaatcaattactggtttatttttcattaaagaaaaaataatactttggaagtagtgt-atataatattaactgaagggt 308  Q
    |||||||||||||||||||||||| || || |||  |||||| ||||||||||||||||||||||||||||||| | |||||||||| | ||||||    
T  23259322 attttaccaaattatcctaatcaactattgatttgcttttcactaaagaaaaaataatactttggaagtagtgtaacataatattaatttaagggt 23259417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 131 - 272
Target Start/End: Complemental strand, 8958010 - 8957865
Alignment:
Q  131 tactccctccgtttcaaaatgaatatcgtttaagatttttacacaca--tattaagaaatgcattaattnnnnnnngaagat--gttattttaccaaatt 226  Q
    ||||| |||||||  ||||||||| ||||||||| ||||||||||||  ||||||||||| ||||||||         ||||  ||||| ||||||||||    
T  8958010 tactcactccgttctaaaatgaatgtcgtttaaggtttttacacacacatattaagaaatacattaattaaatgaaagagatatgttatcttaccaaatt 8957911  T
Q  227 atcctaatcaattactggtttatttttcattaaagaaaaaataata 272  Q
    ||||||||||| || |||||| ||||| ||||||||||||||||||    
T  8957910 atcctaatcaactattggtttgttttttattaaagaaaaaataata 8957865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 131 - 272
Target Start/End: Original strand, 8961347 - 8961492
Alignment:
Q  131 tactccctccgtttcaaaatgaatatcgtttaagatttttacacaca--tattaagaaatgcattaattnnnnnnngaagat--gttattttaccaaatt 226  Q
    ||||| |||||||  ||||||||| ||||||||| ||||||||||||  ||||||||||| ||||||||         ||||  ||||| ||||||||||    
T  8961347 tactcactccgttctaaaatgaatgtcgtttaaggtttttacacacacatattaagaaatacattaattaaatgaaagagatatgttatcttaccaaatt 8961446  T
Q  227 atcctaatcaattactggtttatttttcattaaagaaaaaataata 272  Q
    ||||||||||| || |||||| ||||| ||||||||||||||||||    
T  8961447 atcctaatcaactattggtttgttttttattaaagaaaaaataata 8961492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 138 - 252
Target Start/End: Complemental strand, 32194042 - 32193927
Alignment:
Q  138 tccgtttcaaaatgaatatcgtttaagatttttacacacatattaagaaatgcattaattnnnnnnnga-agatgttattttaccaaattatcctaatca 236  Q
    ||||||||||||||||| ||||||||| |||||||||| ||||||||||||| ||||| |        | ||||||||||||||||||||||||||||||    
T  32194042 tccgtttcaaaatgaatgtcgtttaaggtttttacacatatattaagaaatgtattaaataaaaaaatagagatgttattttaccaaattatcctaatca 32193943  T
Q  237 attactggtttatttt 252  Q
    | || |||||| ||||    
T  32193942 actattggtttgtttt 32193927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 141 - 277
Target Start/End: Complemental strand, 3847882 - 3847744
Alignment:
Q  141 gtttcaaaatgaatatcgtttaagatttttacacacatattaagaaatgcattaattnnnnnnn-gaag-atgttattttaccaaattatcctaatcaat 238  Q
    |||||||||||||| |||||||||| |||||||| |||||||||||||  |||||||        |||| ||||||||||||  ||||||| |||||||     
T  3847882 gtttcaaaatgaatgtcgtttaagacttttacacgcatattaagaaataaattaattaaaagaaagaaggatgttattttacagaattatcttaatcaac 3847783  T
Q  239 tactggtttatttttcattaaagaaaaaataatactttg 277  Q
    || || ||||||||| ||||||||||||||||| |||||    
T  3847782 tattgatttatttttaattaaagaaaaaataatcctttg 3847744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 222 - 306
Target Start/End: Original strand, 10540481 - 10540566
Alignment:
Q  222 aaattatcctaatcaattactggtttatttttcattaaagaaaaaataatactttggaagtagtgt-atataatattaactgaagg 306  Q
    |||||||| ||||||| || || ||| ||||||||||||||||||||||||||||||||||||||| ||||| |||||| ||||||    
T  10540481 aaattatcataatcaactattgatttgtttttcattaaagaaaaaataatactttggaagtagtgtaatatagtattaattgaagg 10540566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 216 - 315
Target Start/End: Original strand, 18737087 - 18737189
Alignment:
Q  216 tttaccaaattatcctaatcaattactggtttatttttcattaaagaaaaaataa---tactttggaagtagtgtatataatattaactgaagggtgtaa 312  Q
    |||| |||||||||||||| || || || ||||||||||||||||||||||||||   ||||||  ||||||||||||||||||||| | |||||| |||    
T  18737087 tttatcaaattatcctaattaactattgttttatttttcattaaagaaaaaataatagtactttaaaagtagtgtatataatattaattaaagggtataa 18737186  T
Q  313 ttg 315  Q
    |||    
T  18737187 ttg 18737189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 214 - 282
Target Start/End: Original strand, 31443442 - 31443510
Alignment:
Q  214 attttaccaaattatcctaatcaattactggtttatttttcattaaagaaaaaataatactttggaagt 282  Q
    |||||||||||||||||||||||| || || ||| ||||| ||||||||||||||||||||||||||||    
T  31443442 attttaccaaattatcctaatcaactattgatttgttttttattaaagaaaaaataatactttggaagt 31443510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 214 - 288
Target Start/End: Original strand, 24163711 - 24163785
Alignment:
Q  214 attttaccaaattatcctaatcaattactggtttatttttcattaaagaaaaaataatactttggaagtagtgta 288  Q
    |||||| |||||||||| |||||| || | |||| |||||||||||||||| |||||||||||||||||||||||    
T  24163711 attttatcaaattatccaaatcaactattagtttgtttttcattaaagaaataataatactttggaagtagtgta 24163785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 131 - 197
Target Start/End: Original strand, 31233534 - 31233600
Alignment:
Q  131 tactccctccgtttcaaaatgaatatcgtttaagatttttacacacatattaagaaatgcattaatt 197  Q
    ||||| ||| ||||||||||||||||| |||||| ||||||||||||||||||||||| ||||||||    
T  31233534 tactcactctgtttcaaaatgaatatcttttaaggtttttacacacatattaagaaatacattaatt 31233600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 242 - 308
Target Start/End: Complemental strand, 32193829 - 32193763
Alignment:
Q  242 tggtttatttttcattaaagaaaaaataatactttggaagtagtgtatataatattaactgaagggt 308  Q
    |||||| |||| |||||||||||| |||||||||||||||||||||||||| |||||| ||||||||    
T  32193829 tggtttgttttacattaaagaaaagataatactttggaagtagtgtatatagtattaattgaagggt 32193763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 140 - 276
Target Start/End: Original strand, 32619746 - 32619884
Alignment:
Q  140 cgtttcaaaatgaatatcgtttaagatttttacacacatattaagaaatgcattaattnnnnnnngaag--atgttattttaccaaattatcctaatcaa 237  Q
    |||||||||||| ||  |||||| ||||||||||||||||||||||||| ||||||||         ||  ||||||| |||  |||||||| |||||||    
T  32619746 cgtttcaaaatgcatgacgtttatgatttttacacacatattaagaaatacattaattaaaagaaagagaaatgttatattattaaattatcttaatcaa 32619845  T
Q  238 ttactggtttatttttcattaaagaaaaaataatacttt 276  Q
     || || ||| ||||||||||||||||||||||||||||    
T  32619846 ctattgatttgtttttcattaaagaaaaaataatacttt 32619884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 214 - 308
Target Start/End: Original strand, 29713403 - 29713498
Alignment:
Q  214 attttaccaaattatcctaatcaattactggtttatttttcattaaagaaaaaataatactttggaagtagtgt-atataatattaactgaagggt 308  Q
    |||||||  ||||||||||||||| || | |||| ||||| ||||||||||||||||||||||| ||||||||| | ||| |||||| ||||||||    
T  29713403 attttacataattatcctaatcaactattagtttgttttttattaaagaaaaaataatactttgaaagtagtgtaacatagtattaattgaagggt 29713498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 214 - 288
Target Start/End: Original strand, 10520387 - 10520461
Alignment:
Q  214 attttaccaaattatcctaatcaattactggtttatttttcattaaagaaaaaataatactttggaagtagtgta 288  Q
    |||||||||||||||| ||||||| || ||| || ||| |||||||| |||||||||||||||  ||||||||||    
T  10520387 attttaccaaattatcttaatcaaatattggattgtttctcattaaataaaaaataatactttaaaagtagtgta 10520461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 130 - 188
Target Start/End: Complemental strand, 29927449 - 29927391
Alignment:
Q  130 atactccctccgtttcaaaatgaatatcgtttaagatttttacacacatattaagaaat 188  Q
    ||||||||||||||||| ||||||| |||||||||||||| ||||||| ||||| ||||    
T  29927449 atactccctccgtttcacaatgaatgtcgtttaagattttgacacacagattaaaaaat 29927391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 214 - 267
Target Start/End: Complemental strand, 19675134 - 19675081
Alignment:
Q  214 attttaccaaattatcctaatcaattactggtttatttttcattaaagaaaaaa 267  Q
    |||||||||||||||||||||||| || || ||| |||||||||||||||||||    
T  19675134 attttaccaaattatcctaatcaactattgatttgtttttcattaaagaaaaaa 19675081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 131 - 191
Target Start/End: Complemental strand, 32429517 - 32429457
Alignment:
Q  131 tactccctccgtttcaaaatgaatatcgtttaagatttttacacacatattaagaaatgca 191  Q
    |||||||||||||||||||||| | | |||| || | ||||||||||||||||||||||||    
T  32429517 tactccctccgtttcaaaatgagtgttgttttaggtgtttacacacatattaagaaatgca 32429457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 219 - 308
Target Start/End: Original strand, 17267609 - 17267699
Alignment:
Q  219 accaaattatcctaatcaattactggtttatttttcattaaagaaaa-aataatactttggaagtagtgtatataatattaactgaagggt 308  Q
    |||||||||| |||||||| || | |||| ||||| || |||||||| |||||||||||  || |||||||||||||||||| | ||||||    
T  17267609 accaaattattctaatcaaatattagtttgttttttatcaaagaaaaaaataatactttaaaaatagtgtatataatattaattaaagggt 17267699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 131 - 196
Target Start/End: Original strand, 26405188 - 26405253
Alignment:
Q  131 tactccctccgtttcaaaatgaatatcgtttaagatttttacacacatattaagaaatgcattaat 196  Q
    |||||| ||||||||||||||| | | ||||||| || ||||||||||||||| ||||||| ||||    
T  26405188 tactccatccgtttcaaaatgagtgtggtttaaggttgttacacacatattaataaatgcaataat 26405253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 131 - 191
Target Start/End: Original strand, 4850418 - 4850478
Alignment:
Q  131 tactccctccgtttcaaaatgaatatcgtttaagatttttacacacatattaagaaatgca 191  Q
    |||||| | ||||||||||||| | |||||| || | ||||||||||||||||||||||||    
T  4850418 tactccattcgtttcaaaatgagtgtcgttttaggtgtttacacacatattaagaaatgca 4850478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 131 - 191
Target Start/End: Complemental strand, 29400175 - 29400115
Alignment:
Q  131 tactccctccgtttcaaaatgaatatcgtttaagatttttacacacatattaagaaatgca 191  Q
    |||||||||||||| ||||||  | | |||| |||| ||||||||||||||||||||||||    
T  29400175 tactccctccgttttaaaatgtgtgttgttttagatctttacacacatattaagaaatgca 29400115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 131 - 197
Target Start/End: Original strand, 12321490 - 12321554
Alignment:
Q  131 tactccctccgtttcaaaatgaatatcgtttaagatttttacacacatattaagaaatgcattaatt 197  Q
    |||||| ||||||| ||||| ||||||||||||||  |||||| | ||||||| |||||||||||||    
T  12321490 tactccttccgttttaaaataaatatcgtttaaga--tttacaaatatattaaaaaatgcattaatt 12321554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 134 - 197
Target Start/End: Original strand, 18737003 - 18737066
Alignment:
Q  134 tccctccgtttcaaaatgaatatcgtttaagatttttacacacatattaagaaatgcattaatt 197  Q
    ||||| ||||| ||||| ||| ||||||||  ||||||| |||||||||| |||||||||||||    
T  18737003 tcccttcgtttgaaaattaatgtcgtttaaagtttttacgcacatattaaaaaatgcattaatt 18737066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 129 - 188
Target Start/End: Complemental strand, 29915785 - 29915726
Alignment:
Q  129 tatactccctccgtttcaaaatgaatatcgtttaagatttttacacacatattaagaaat 188  Q
    |||||||||||||||||||||||||| | |||| || | ||  |||||||||||||||||    
T  29915785 tatactccctccgtttcaaaatgaatgttgttttaggtgttggcacacatattaagaaat 29915726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 249 - 299
Target Start/End: Complemental strand, 19600541 - 19600491
Alignment:
Q  249 tttttcattaaagaaaaaataatactttggaagtagtgtatataatattaa 299  Q
    ||||| |||||||||||||||||| ||||||||||| |||| ||| |||||    
T  19600541 ttttttattaaagaaaaaataatattttggaagtagcgtatctaacattaa 19600491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 259 - 288
Target Start/End: Original strand, 17246678 - 17246707
Alignment:
Q  259 aagaaaaaataatactttggaagtagtgta 288  Q
    ||||||||||||||||||||||||||||||    
T  17246678 aagaaaaaataatactttggaagtagtgta 17246707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 214 - 267
Target Start/End: Original strand, 24555924 - 24555977
Alignment:
Q  214 attttaccaaattatcctaatcaattactggtttatttttcattaaagaaaaaa 267  Q
    |||||||||||||||| ||||||| || || ||| |||||||||||| ||||||    
T  24555924 attttaccaaattatcataatcaactattgatttgtttttcattaaaaaaaaaa 24555977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 128 - 188
Target Start/End: Original strand, 10494636 - 10494696
Alignment:
Q  128 atatactccctccgtttcaaaatgaatatcgtttaagatttttacacacatattaagaaat 188  Q
    ||||||||| ||| ||||| ||||| | ||||||||| |||| | ||||||||||||||||    
T  10494636 atatactccatccatttcacaatgattgtcgtttaaggttttgatacacatattaagaaat 10494696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0300 (Bit Score: 80; Significance: 2e-37; HSPs: 1)
Name: scaffold0300
Description:

Target: scaffold0300; HSP #1
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 137 - 297
Target Start/End: Complemental strand, 4797 - 4637
Alignment:
Q  137 ctccgtttcaaaatgaatatcgtttaagatttttacacacatattaagaaatgcattaattnnnnnnngaagatgttattttaccaaattatcctaatca 236  Q
    |||||||| ||||| ||| |||||||| ||||||||||||||||||||||||||||||| |        ||||||||||||||||||| |||||||||||    
T  4797 ctccgttttaaaataaatgtcgtttaaaatttttacacacatattaagaaatgcattaactaaaaaaaaaagatgttattttaccaaactatcctaatca 4698  T
Q  237 attactggtttatttttcattaaagaaaaaataatactttggaagtagtgtatataatatt 297  Q
    | || || ||| ||||| ||||||| ||| |||||| ||||||||||||||||||||||||    
T  4697 actattgatttgttttttattaaagtaaatataatattttggaagtagtgtatataatatt 4637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 80; Significance: 2e-37; HSPs: 71)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 141 - 306
Target Start/End: Complemental strand, 28289445 - 28289277
Alignment:
Q  141 gtttcaaaatgaatatcgtttaagatttttacacacatattaagaaatgcattaattnnnnnnn-ga-agatgttattttaccaaattatcctaatcaat 238  Q
    |||| ||||||||| ||||||||| |||||||||||||||||| |||| ||||||||        || |||||||||||||||||||||||||||||||     
T  28289445 gttttaaaatgaatgtcgtttaaggtttttacacacatattaataaatacattaattaaaataaagagagatgttattttaccaaattatcctaatcaac 28289346  T
Q  239 tactggtttatttttcattaaagaa-aaaataatactttggaagtagtgtatataatattaactgaagg 306  Q
    || |||||| ||||||||||||||| |||||||||||||| |||||||||||||| |||||| ||||||    
T  28289345 tattggtttgtttttcattaaagaaaaaaataatactttgaaagtagtgtatatagtattaattgaagg 28289277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 207 - 315
Target Start/End: Original strand, 29636215 - 29636323
Alignment:
Q  207 agatgttattttaccaaattatcctaatcaattactggtttatttttcattaaagaaaaaataatactttggaagtagtgtatataatattaactgaagg 306  Q
    ||||||||||||| |||||||||||||| ||||| |||||| |||||||||||||||||||||||||||| ||||||||||||||| |||||| ||||||    
T  29636215 agatgttattttatcaaattatcctaataaattattggtttgtttttcattaaagaaaaaataatactttagaagtagtgtatatagtattaattgaagg 29636314  T
Q  307 gtgtaattg 315  Q
     ||||||||    
T  29636315 atgtaattg 29636323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 130 - 314
Target Start/End: Original strand, 47461285 - 47461469
Alignment:
Q  130 atactccctccgtttcaaaatgaatatcgtttaagatttttacacacatattaagaaatgcattaattnnnnnnngaa-gatgttattttaccaaattat 228  Q
    ||||||| ||||||||||||||||  |||||||| |||||||||||||||||||||||| ||||||||        || ||||| |||||| ||||||||    
T  47461285 atactccatccgtttcaaaatgaacgtcgtttaaaatttttacacacatattaagaaatacattaattaaaaaaaaaaagatgtcattttatcaaattat 47461384  T
Q  229 cctaatcaattactggtttatttttcattaaagaaaaaataatactttggaagtagtgtatataatattaactgaagggtgtaatt 314  Q
    ||||||||| || |||||| ||||||||||||||||||||||| |||| | ||||||||||||| || ||| |||| ||| |||||    
T  47461385 cctaatcaactattggtttgtttttcattaaagaaaaaataat-ctttaggagtagtgtatatagtaataattgaatggtataatt 47461469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 209 - 308
Target Start/End: Complemental strand, 40339619 - 40339519
Alignment:
Q  209 atgttattttaccaaattatcctaatcaattactggtttatttttcattaaagaaaaaataatactttggaagtagtgtat-ataatattaactgaaggg 307  Q
    ||||||||||||||||||||||||||||| || |||||| ||||||||||||||||||| ||||||||||||||||||||| |||||||||| |||||||    
T  40339619 atgttattttaccaaattatcctaatcaactattggtttgtttttcattaaagaaaaaagaatactttggaagtagtgtataataatattaattgaaggg 40339520  T
Q  308 t 308  Q
    |    
T  40339519 t 40339519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 160 - 304
Target Start/End: Original strand, 40753370 - 40753514
Alignment:
Q  160 ttaagatttttacacacatattaagaaatgcattaattnnnnnnngaa-gatgttattttaccaaattatcctaatcaattactggtttatttttcatta 258  Q
    ||||| ||||||||||||||||||||||||||||||||        || ||| ||||||||||||||||| |||||||| || |||||| ||||||||||    
T  40753370 ttaaggtttttacacacatattaagaaatgcattaattaaaaaaaaaaagatattattttaccaaattattctaatcaactattggtttgtttttcatta 40753469  T
Q  259 aagaaaaaataatactttggaagtagtgtatataatattaactgaa 304  Q
    ||| ||||||||||||||| |||||||||||||| |||||| ||||    
T  40753470 aag-aaaaataatactttgaaagtagtgtatatagtattaattgaa 40753514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 214 - 308
Target Start/End: Complemental strand, 22298152 - 22298057
Alignment:
Q  214 attttaccaaattatcctaatcaattactggtttatttttcattaaagaaaaaataatactttggaagtagtgt-atataatattaactgaagggt 308  Q
    |||||||||||||||||||||||| || |||||| ||||||||||||||||||||||||||||||||||||||| | ||| |||||||||||||||    
T  22298152 attttaccaaattatcctaatcaactattggtttgtttttcattaaagaaaaaataatactttggaagtagtgtaacatagtattaactgaagggt 22298057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 207 - 304
Target Start/End: Complemental strand, 21819445 - 21819348
Alignment:
Q  207 agatgttattttaccaaattatcctaatcaattactggtttatttttcattaaagaaaaaataatactttggaagtagtgtatataatattaactgaa 304  Q
    |||||||||||||||||||||||||||| || || |||||| |||||||||||||||||||||||| |||||||||| |||||||| |||||| ||||    
T  21819445 agatgttattttaccaaattatcctaataaactattggtttgtttttcattaaagaaaaaataatattttggaagtaatgtatatagtattaattgaa 21819348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 131 - 315
Target Start/End: Complemental strand, 48843795 - 48843606
Alignment:
Q  131 tactccctccgtttcaaaatgaatatcgtttaagatttttacacacatattaagaaatgcattaattnnnnnnn-ga-agatgttattttac--caaatt 226  Q
    |||||||| | ||| ||||||| | ||||||||| |||||||| ||||||||||||||||| | |||        || ||||||||||||||  ||||||    
T  48843795 tactcccttcattttaaaatgagtgtcgtttaaggtttttacatacatattaagaaatgcactgattaaaagaaagagagatgttattttacaccaaatt 48843696  T
Q  227 atcctaatcaattactggtttatttttcattaaagaa-aaaataatactttggaagtagtgtatataatattaactgaagggtgtaattg 315  Q
    ||||||||||| || |||||| ||||||||||||||| |||||||||| |||||||||||||||||| |||||| | |||||| ||||||    
T  48843695 atcctaatcaactattggtttgtttttcattaaagaaaaaaataatacgttggaagtagtgtatatagtattaaattaagggtataattg 48843606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 209 - 304
Target Start/End: Original strand, 33939724 - 33939820
Alignment:
Q  209 atgttattttaccaaattatcctaatcaattactggtttatttttcattaaagaaaaaa-taatactttggaagtagtgtatataatattaactgaa 304  Q
    |||||||||||||||||||| |||||||| |  |||||||||||||||||||||||||| ||||||||||||| |||||||||||||||||| ||||    
T  33939724 atgttattttaccaaattattctaatcaactgttggtttatttttcattaaagaaaaaagtaatactttggaattagtgtatataatattaattgaa 33939820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 214 - 308
Target Start/End: Complemental strand, 1742147 - 1742052
Alignment:
Q  214 attttaccaaattatcctaatcaattactggtttatttttcattaaagaaaaaataatactttggaagtagtgt-atataatattaactgaagggt 308  Q
    |||||||||||||||||||||||| || |||||| ||||||||||||||||||||||||||||| ||||||||| | ||| |||||| ||||||||    
T  1742147 attttaccaaattatcctaatcaactattggtttgtttttcattaaagaaaaaataatactttgaaagtagtgtaacatagtattaattgaagggt 1742052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 208 - 299
Target Start/End: Original strand, 8293058 - 8293149
Alignment:
Q  208 gatgttattttaccaaattatcctaatcaattactggtttatttttcattaaagaaaaaataatactttggaagtagtgtatataatattaa 299  Q
    |||||||||||||||||||||| | ||||| || || ||| |||||||||| ||||||||||||| ||||||||||||||||||||||||||    
T  8293058 gatgttattttaccaaattatcgtgatcaactattgatttgtttttcattacagaaaaaataataatttggaagtagtgtatataatattaa 8293149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 209 - 304
Target Start/End: Original strand, 21752102 - 21752197
Alignment:
Q  209 atgttattttaccaaattatcctaatcaattactggtttatttttcattaaagaaaaaataatactttggaagtagtgtatataatattaactgaa 304  Q
    |||||||||||||||||||| |||||||| || |||||| |||||||||||||| |||||||||||||| || ||||||||||||| |||| ||||    
T  21752102 atgttattttaccaaattattctaatcaactattggtttgtttttcattaaagataaaataatactttgaaaatagtgtatataatgttaattgaa 21752197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 214 - 308
Target Start/End: Complemental strand, 35777975 - 35777880
Alignment:
Q  214 attttaccaaattatcctaatcaattactggtttatttttcattaaagaaaaaataatactttggaagtagtgt-atataatattaactgaagggt 308  Q
    ||||||||||||||||||||| || || |||||| ||||||||||||||||||||||||||||||||||||||| ||||| || ||| ||||||||    
T  35777975 attttaccaaattatcctaataaactattggtttgtttttcattaaagaaaaaataatactttggaagtagtgtaatatagtactaattgaagggt 35777880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 214 - 315
Target Start/End: Complemental strand, 37815880 - 37815778
Alignment:
Q  214 attttaccaaattatcctaatcaattactggtttatttttcattaaagaaaaaataatactttggaagtagtgt-atataatattaactgaagggtgtaa 312  Q
    |||||||||||||||||||||||| || || ||| ||||||||||||||||||||||||||||| ||||||||| | ||| |||||| |||||||| |||    
T  37815880 attttaccaaattatcctaatcaactattgatttgtttttcattaaagaaaaaataatactttgaaagtagtgtaacatagtattaattgaagggtataa 37815781  T
Q  313 ttg 315  Q
    |||    
T  37815780 ttg 37815778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 209 - 308
Target Start/End: Complemental strand, 10476296 - 10476197
Alignment:
Q  209 atgttattttaccaaattatcctaatcaattactggtttatttttcattaaagaaaaaataatactttggaagtagtgtatataatattaactgaagggt 308  Q
    ||||||||||| ||||||||||||||||| || || ||| ||||| | |||| || |||||||||||||||||||||||||||| |||||| ||||||||    
T  10476296 atgttattttatcaaattatcctaatcaactattgatttgttttttactaaaaaataaataatactttggaagtagtgtatatagtattaattgaagggt 10476197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 214 - 308
Target Start/End: Original strand, 13405122 - 13405217
Alignment:
Q  214 attttaccaaattatcctaatcaattactggtttatttttcattaaagaaaaaataatactttggaagtagtgt-atataatattaactgaagggt 308  Q
    |||||||||||||||||||||||| || |||||| ||||||||||||||||||| ||||||||| ||||||||| | ||| |||||| ||||||||    
T  13405122 attttaccaaattatcctaatcaactattggtttgtttttcattaaagaaaaaacaatactttgaaagtagtgtaacatagtattaattgaagggt 13405217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 219 - 305
Target Start/End: Complemental strand, 7759410 - 7759324
Alignment:
Q  219 accaaattatcctaatcaattactggtttatttttcattaaagaaaaaataatactttggaagtagtgtatataatattaactgaag 305  Q
    ||||||||||||||||||| || | |||| ||||  ||||||||||||||||||||||| ||||||||||||||||||||| |||||    
T  7759410 accaaattatcctaatcaactattagtttgttttctattaaagaaaaaataatactttgaaagtagtgtatataatattaattgaag 7759324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 138 - 308
Target Start/End: Original strand, 6563336 - 6563504
Alignment:
Q  138 tccgtttcaaaatgaatatcgtttaagatttttacacacatattaagaaatgcattaattnnnnnnngaaga--tgttattttaccaaattatcctaatc 235  Q
    ||||||| ||||||||| ||||||||  ||||||| || |||||||||||| ||||||||         |||  |||||||||| |||||||||||||||    
T  6563336 tccgttttaaaatgaatgtcgtttaaattttttacgcatatattaagaaatacattaattaaaagaaagagacatgttattttatcaaattatcctaatc 6563435  T
Q  236 aattactggtttatttttcattaaag-aaaaaataatactttggaagtagtgtatataatattaactgaagggt 308  Q
    ||  | |||||| ||||||||||||| |||||||||||||||||||     |||||||||||||| ||||||||    
T  6563436 aaccattggtttgtttttcattaaagaaaaaaataatactttggaa-----gtatataatattaattgaagggt 6563504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 131 - 288
Target Start/End: Complemental strand, 37491027 - 37490868
Alignment:
Q  131 tactccctccgtttcaaaatgaatatcgtttaagatttttacacacatattaagaaatgcattaattnnnnnnngaagatgt--tattttaccaaattat 228  Q
    |||||| | |||| |||||| ||| ||||||||| |||||||||||||||||||||||| |||||||        |||||||  ||||||||||||||||    
T  37491027 tactccattcgttacaaaataaatgtcgtttaaggtttttacacacatattaagaaatgaattaattagaaaaa-aagatgtgatattttaccaaattat 37490929  T
Q  229 cctaatcaattactggtttatttttcattaaag-aaaaaataatactttggaagtagtgta 288  Q
    | |||| || || | |||| ||||||||||||| |||||||||||||||  ||||||||||    
T  37490928 cttaataaactattagtttgtttttcattaaagaaaaaaataatactttccaagtagtgta 37490868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 214 - 308
Target Start/End: Original strand, 27947496 - 27947591
Alignment:
Q  214 attttaccaaattatcctaatcaattactggtttatttttcattaaagaaaaaataatactttggaagtagtgta-tataatattaactgaagggt 308  Q
    ||||||| |||||||||||||||| || || ||| |||||||||||||||||||| || ||||||||||||||||  |||||||||| ||||||||    
T  27947496 attttactaaattatcctaatcaactattgatttgtttttcattaaagaaaaaatcatcctttggaagtagtgtagcataatattaattgaagggt 27947591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 214 - 308
Target Start/End: Original strand, 42879929 - 42880024
Alignment:
Q  214 attttaccaaattatcctaatcaattactggtttatttttcattaaagaaaaaataatactttggaagtagtgt-atataatattaactgaagggt 308  Q
    |||||||||||||||| ||||||| || | |||| ||||||||||||||||||||||| ||||||||||||||| | ||| |||||| ||||||||    
T  42879929 attttaccaaattatcgtaatcaactattagtttgtttttcattaaagaaaaaataattctttggaagtagtgtaacatagtattaattgaagggt 42880024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 207 - 305
Target Start/End: Complemental strand, 1031317 - 1031219
Alignment:
Q  207 agatgttattttaccaaattatcctaatcaattactggtttatttttcattaaagaaaaaataatactttggaagtagtgtatataatattaactgaag 305  Q
    |||||||||  |||||||||||| ||||||| || || ||  ||||| |||||||||||||||||| ||||||||||||||||||| |||||| |||||    
T  1031317 agatgttatcataccaaattatcataatcaactattgattctttttttattaaagaaaaaataataatttggaagtagtgtatatagtattaattgaag 1031219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 131 - 197
Target Start/End: Complemental strand, 4268972 - 4268906
Alignment:
Q  131 tactccctccgtttcaaaatgaatatcgtttaagatttttacacacatattaagaaatgcattaatt 197  Q
    ||||||| |||||| ||||||||| ||||||||| ||||||||||||||||||||||||||||||||    
T  4268972 tactcccgccgttttaaaatgaatgtcgtttaaggtttttacacacatattaagaaatgcattaatt 4268906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 131 - 282
Target Start/End: Complemental strand, 25056020 - 25055869
Alignment:
Q  131 tactccctccgtttcaaaatgaatatcgtttaagatttttacacacatattaagaaatgcattaattnnnnnnngaagatgttattttaccaaattatcc 230  Q
    |||||| ||||||| ||||||||| | ||||||  |||||||||| ||||||| ||||| |||||||         |||||||||||||||| ||||||     
T  25056020 tactccatccgttttaaaatgaatgttgtttaaagtttttacacatatattaaaaaatgtattaattaaaagaaagagatgttattttaccacattatca 25055921  T
Q  231 taatcaattactggtttatttttcattaaagaaaaaataatactttggaagt 282  Q
    ||||  | || || ||| |||||||||||||||||||||||| |||||||||    
T  25055920 taatttactattgatttgtttttcattaaagaaaaaataatattttggaagt 25055869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 206 - 308
Target Start/End: Original strand, 24133116 - 24133220
Alignment:
Q  206 aagatgttattttaccaaattatcctaatcaatt--actggtttatttttcattaaagaaaaaataatactttggaagtagtgtatataatattaactga 303  Q
    ||||| ||||||||||||||||| |||||||| |  | || ||| |||||||||||||||||||||||| |||||| ||||| |||||| |||||| |||    
T  24133116 aagatattattttaccaaattatactaatcaactgtattgatttgtttttcattaaagaaaaaataatattttggatgtagtatatatagtattaattga 24133215  T
Q  304 agggt 308  Q
    |||||    
T  24133216 agggt 24133220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 214 - 283
Target Start/End: Complemental strand, 24680284 - 24680215
Alignment:
Q  214 attttaccaaattatcctaatcaattactggtttatttttcattaaagaaaaaataatactttggaagta 283  Q
    ||||||||||||||| |||||||| || || ||| |||||||||||||||||||||||||||||||||||    
T  24680284 attttaccaaattattctaatcaactattgatttgtttttcattaaagaaaaaataatactttggaagta 24680215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 212 - 307
Target Start/End: Complemental strand, 31196725 - 31196632
Alignment:
Q  212 ttattttaccaaattatcctaatcaattactggtttatttttcattaaagaaaaaataatactttggaagtagtgtatataatattaactgaaggg 307  Q
    |||||||| |||||||||  |||||| || || |||||||||  |||||||||||||||||||||| || |||||||||||||||||| |||||||    
T  31196725 ttattttatcaaattatcacaatcaactattgatttattttt--ttaaagaaaaaataatactttgaaattagtgtatataatattaattgaaggg 31196632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 156 - 285
Target Start/End: Original strand, 45499759 - 45499895
Alignment:
Q  156 tcgtttaagatttttacacacatattaagaaatgcattaattnnnnnnn---gaagatgttattttaccaaattatcctaatcaattactggtttatttt 252  Q
    ||||||||| ||||||||||||||||||||||| ||||||||          || |||| |||||||||||||||||||||| || || |||||| ||||    
T  45499759 tcgtttaagctttttacacacatattaagaaatacattaattaaaataaagagatgatgctattttaccaaattatcctaattaactattggtttgtttt 45499858  T
Q  253 tcattaaagaaaa----aataatactttggaagtagt 285  Q
    |||||||||||||    |||||||||||| |||||||    
T  45499859 tcattaaagaaaaaaataataatactttgaaagtagt 45499895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 214 - 304
Target Start/End: Original strand, 23155457 - 23155547
Alignment:
Q  214 attttaccaaattatcctaatcaattactggtttatttttcattaaagaaaaaataatactttggaagtagtgt-atataatattaactgaa 304  Q
    |||||||||||||||||||||||| || |||||| |||||||||||| ||||||||||||||| |||||| ||| | |||||||||| ||||    
T  23155457 attttaccaaattatcctaatcaactattggtttgtttttcattaaa-aaaaaataatactttagaagtaatgtaacataatattaattgaa 23155547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 214 - 308
Target Start/End: Complemental strand, 23935577 - 23935482
Alignment:
Q  214 attttaccaaattatcctaatcaattactggtttatttttcattaaagaaaaaataatactttggaagtagtgt-atataatattaactgaagggt 308  Q
    |||||||||||||||||||||||| || || ||| ||||| ||||||||||||||||| ||| ||||||||||| | ||| |||||| ||||||||    
T  23935577 attttaccaaattatcctaatcaactattgttttgttttttattaaagaaaaaataatccttcggaagtagtgtaacatagtattaattgaagggt 23935482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 214 - 308
Target Start/End: Original strand, 31418508 - 31418603
Alignment:
Q  214 attttaccaaattatcctaatcaattactggtttatttttcattaaagaaaaaataatactttggaagtagtgt-atataatattaactgaagggt 308  Q
    |||| ||||||||||||||||||| || |  ||| ||||| ||||||||||||||||||||||||||||||||| | ||| |||||| ||||||||    
T  31418508 atttcaccaaattatcctaatcaactattaatttgtttttaattaaagaaaaaataatactttggaagtagtgtaacatagtattaattgaagggt 31418603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 214 - 308
Target Start/End: Original strand, 45948625 - 45948720
Alignment:
Q  214 attttaccaaattatcctaatcaattactggtttatttttcattaaagaaaaaataatactttggaagtagtgt-atataatattaactgaagggt 308  Q
    |||||||||||||||| |||||||  | |||||| |||||||||||||||||||||||| |||||||||| ||| | ||| |||||| ||||||||    
T  45948625 attttaccaaattatcgtaatcaaccattggtttgtttttcattaaagaaaaaataatattttggaagtaatgtaacatagtattaattgaagggt 45948720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 207 - 292
Target Start/End: Original strand, 24780307 - 24780393
Alignment:
Q  207 agatgttattttaccaaattatcctaatcaattactggtttatttttcattaaagaaaaa-ataatactttggaagtagtgtatata 292  Q
    |||||||||||||| |||||||||||||| | || |||||||||||| ||||||||||||  |||||||||| || |||||||||||    
T  24780307 agatgttattttactaaattatcctaatctactattggtttatttttaattaaagaaaaacgtaatactttgaaattagtgtatata 24780393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 127 - 197
Target Start/End: Complemental strand, 30312779 - 30312709
Alignment:
Q  127 catatactccctccgtttcaaaatgaatatcgtttaagatttttacacacatattaagaaatgcattaatt 197  Q
    |||||||||||||||| | ||||||||| ||||||||| |||||||||| ||||||| |||||||||||||    
T  30312779 catatactccctccgtattaaaatgaatgtcgtttaaggtttttacacatatattaaaaaatgcattaatt 30312709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 142 - 267
Target Start/End: Complemental strand, 34012686 - 34012559
Alignment:
Q  142 tttcaaaatgaatatcgtttaagatttttacacacatattaagaaatgcattaattnnnnnnn-ga-agatgttattttaccaaattatcctaatcaatt 239  Q
    |||||||||||||  | |||||| |||||||||| |||||||||||| ||||||||        || | ||||||||||||||||||||||||||||| |    
T  34012686 tttcaaaatgaatggcatttaaggtttttacacatatattaagaaatccattaattaaaagaaagataaatgttattttaccaaattatcctaatcaact 34012587  T
Q  240 actggtttatttttcattaaagaaaaaa 267  Q
    | || ||| |||||||||||||||||||    
T  34012586 attgatttgtttttcattaaagaaaaaa 34012559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 123 - 188
Target Start/End: Complemental strand, 40800399 - 40800334
Alignment:
Q  123 aaatcatatactccctccgtttcaaaatgaatatcgtttaagatttttacacacatattaagaaat 188  Q
    |||||| ||||||||||||||||||||||||  ||||||||| || ||||||||||||||||||||    
T  40800399 aaatcaaatactccctccgtttcaaaatgaaagtcgtttaaggttgttacacacatattaagaaat 40800334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 128 - 189
Target Start/End: Original strand, 44057529 - 44057590
Alignment:
Q  128 atatactccctccgtttcaaaatgaatatcgtttaagatttttacacacatattaagaaatg 189  Q
    ||||||||||||||||||||||||| | | |||||||||||||||||||| |||||||||||    
T  44057529 atatactccctccgtttcaaaatgagtgttgtttaagatttttacacacaaattaagaaatg 44057590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 140 - 274
Target Start/End: Original strand, 19303314 - 19303450
Alignment:
Q  140 cgtttcaaaatgaatatcgtttaagatttttacacacatattaagaaatgcattaattnnnnnnngaaga--tgttattttaccaaattatcctaatcaa 237  Q
    ||||||||||| ||| ||||||||  ||||||||  |||||||| |||||||||||||         |||  ||||||||||| |||||||| |||||||    
T  19303314 cgtttcaaaataaatttcgtttaaagtttttacatgcatattaaaaaatgcattaattaaaagaaagagaaatgttattttactaaattatcataatcaa 19303413  T
Q  238 ttactggtttatttttcattaaagaaaaaataatact 274  Q
      | |||||||||||||||||||||||| ||||||||    
T  19303414 ccattggtttatttttcattaaagaaaatataatact 19303450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 131 - 191
Target Start/End: Complemental strand, 42286138 - 42286078
Alignment:
Q  131 tactccctccgtttcaaaatgaatatcgtttaagatttttacacacatattaagaaatgca 191  Q
    |||||||||||||| ||||||||| ||||||||| |||||||| |||||||||||||||||    
T  42286138 tactccctccgttttaaaatgaatgtcgtttaaggtttttacaaacatattaagaaatgca 42286078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 214 - 308
Target Start/End: Complemental strand, 44453289 - 44453196
Alignment:
Q  214 attttaccaaattatcctaatcaattactggtttatttttcattaaagaaaaaataatactttggaagtagtgt-atataatattaactgaagggt 308  Q
    |||||||||||||||||||||||  || |||||| |||||||||||  ||||||||||||||| |||||||||| | ||| |||||| ||||||||    
T  44453289 attttaccaaattatcctaatcacctattggtttgtttttcattaa--aaaaaataatactttagaagtagtgtaacatagtattaattgaagggt 44453196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 214 - 269
Target Start/End: Complemental strand, 10599519 - 10599464
Alignment:
Q  214 attttaccaaattatcctaatcaattactggtttatttttcattaaagaaaaaata 269  Q
    |||||||||||||||||||||||| || |||||| |||||||||||||||||||||    
T  10599519 attttaccaaattatcctaatcaactattggtttgtttttcattaaagaaaaaata 10599464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 214 - 285
Target Start/End: Complemental strand, 27935923 - 27935852
Alignment:
Q  214 attttaccaaattatcctaatcaattactggtttatttttcattaaagaaaaaataatactttggaagtagt 285  Q
    |||||||||||||| | |||| || || || ||| |||||||||||||||||||||||||||||||||||||    
T  27935923 attttaccaaattagcttaattaactattgatttgtttttcattaaagaaaaaataatactttggaagtagt 27935852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 214 - 308
Target Start/End: Original strand, 29530930 - 29531025
Alignment:
Q  214 attttaccaaattatcctaatcaattactggtttatttttcattaaagaaaaaataatactttggaagtagtgt-atataatattaactgaagggt 308  Q
    |||||||||||| ||||||||||| || || ||| ||||| ||| ||||||||||||||||||| |||| |||| | |||||||||| ||||||||    
T  29530930 attttaccaaatcatcctaatcaactattgatttgttttttattgaagaaaaaataatactttgaaagtggtgtaacataatattaattgaagggt 29531025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 257 - 308
Target Start/End: Complemental strand, 30312570 - 30312519
Alignment:
Q  257 taaagaaaaaataatactttggaagtagtgtatataatattaactgaagggt 308  Q
    |||||||||||||||||||||||||||||||||| |||||||| ||||||||    
T  30312570 taaagaaaaaataatactttggaagtagtgtatacaatattaattgaagggt 30312519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 214 - 288
Target Start/End: Complemental strand, 41137884 - 41137810
Alignment:
Q  214 attttaccaaattatcctaatcaattactggtttatttttcattaaag-aaaaaataatactttggaagtagtgta 288  Q
    |||||||||||||||||||||||| |||||||||   ||||||||||| |||||||| ||||||||||||||||||    
T  41137884 attttaccaaattatcctaatcaactactggttt-gatttcattaaagaaaaaaatattactttggaagtagtgta 41137810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 258 - 308
Target Start/End: Complemental strand, 8604086 - 8604036
Alignment:
Q  258 aaagaaaaaataatactttggaagtagtgtatataatattaactgaagggt 308  Q
    ||||||||||||||||||||||||||||||||||| |||||| ||||||||    
T  8604086 aaagaaaaaataatactttggaagtagtgtatatagtattaattgaagggt 8604036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 128 - 189
Target Start/End: Original strand, 39135997 - 39136059
Alignment:
Q  128 atatactccctccgtttcaaaatgaa-tatcgtttaagatttttacacacatattaagaaatg 189  Q
    ||||||||| |||||||||||||||| |||||||||||||||||||||| | |||||||||||    
T  39135997 atatactccttccgtttcaaaatgaaatatcgtttaagatttttacacataaattaagaaatg 39136059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 229 - 306
Target Start/End: Complemental strand, 42753845 - 42753770
Alignment:
Q  229 cctaatcaattactggtttatttttcattaaagaaaaaataatactttggaagtagtgtatataatattaactgaagg 306  Q
    ||||||||| || |||||||||||||||||||  ||||||||||||||  || |||||||||||||||||| ||||||    
T  42753845 cctaatcaactattggtttatttttcattaaa--aaaaataatactttaaaaatagtgtatataatattaattgaagg 42753770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 206 - 277
Target Start/End: Complemental strand, 7335444 - 7335372
Alignment:
Q  206 aagatgttattttaccaaattatcctaatcaattactggtttattttt-cattaaagaaaaaataatactttg 277  Q
    |||||||||||||||||||||||| ||||||| |  |||||| |||||  |||||||||||||||||||||||    
T  7335444 aagatgttattttaccaaattatcataatcaactgttggtttgtttttaaattaaagaaaaaataatactttg 7335372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 214 - 315
Target Start/End: Original strand, 45933584 - 45933685
Alignment:
Q  214 attttaccaaattatcctaatcaattactggtttatttttcattaaagaaaaaataatactttggaagtagtgt-atataatattaactgaagggtgtaa 312  Q
    |||||| ||||||||| ||||||| |  |||||| |||||||||||| ||||||||||||||| ||| |||||| | ||| |||||| ||||||||| ||    
T  45933584 attttatcaaattatcttaatcaacttttggtttgtttttcattaaa-aaaaaataatactttagaaatagtgtaacatagtattaattgaagggtgcaa 45933682  T
Q  313 ttg 315  Q
    |||    
T  45933683 ttg 45933685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 214 - 288
Target Start/End: Complemental strand, 48684879 - 48684805
Alignment:
Q  214 attttaccaaattatcctaatcaattactggtttatttttcattaaagaaaaaataatactttggaagtagtgta 288  Q
    |||||||||||||||||| ||||  || || ||| ||||| ||||||||||||||||||||||| |||| |||||    
T  48684879 attttaccaaattatccttatcatctattgatttgttttttattaaagaaaaaataatactttgaaagtggtgta 48684805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 130 - 191
Target Start/End: Complemental strand, 6747457 - 6747396
Alignment:
Q  130 atactccctccgtttcaaaatgaatatcgtttaagatttttacacacatattaagaaatgca 191  Q
    |||||| |||||||||||||||| | |||||| || | ||||||||||||||||||||||||    
T  6747457 atactctctccgtttcaaaatgagtgtcgttttaggtgtttacacacatattaagaaatgca 6747396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 130 - 191
Target Start/End: Original strand, 31929779 - 31929840
Alignment:
Q  130 atactccctccgtttcaaaatgaatatcgtttaagatttttacacacatattaagaaatgca 191  Q
    ||||||||||| ||||||||||| | |||||| |||| |||||||| |||||||||||||||    
T  31929779 atactccctccatttcaaaatgagtgtcgttttagatgtttacacatatattaagaaatgca 31929840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 131 - 191
Target Start/End: Complemental strand, 18292565 - 18292505
Alignment:
Q  131 tactccctccgtttcaaaatgaatatcgtttaagatttttacacacatattaagaaatgca 191  Q
    |||||||| ||||||||||||| | |||||| || | ||||||||||||||||||||||||    
T  18292565 tactcccttcgtttcaaaatgagtgtcgttttaggtgtttacacacatattaagaaatgca 18292505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 212 - 308
Target Start/End: Original strand, 19104995 - 19105091
Alignment:
Q  212 ttattttaccaaattatcctaatcaattactggtttatttttcattaaagaaaaaataatactttggaagtagtgtatataatattaactgaagggt 308  Q
    |||||||| ||| | ||||||||||| || || ||| || ||||||||||||||||||||  |||  ||||| |||||||| |||||| ||||||||    
T  19104995 ttattttatcaagtaatcctaatcaactattgatttgttcttcattaaagaaaaaataatgttttaaaagtaatgtatatagtattaattgaagggt 19105091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 129 - 191
Target Start/End: Complemental strand, 2297275 - 2297213
Alignment:
Q  129 tatactccctccgtttcaaaatgaatatcgtttaagatttttacacacatattaagaaatgca 191  Q
    ||||||||||| |||||||||| | | |||||| || | ||||||||||||||||||||||||    
T  2297275 tatactccctctgtttcaaaattattgtcgttttaggtgtttacacacatattaagaaatgca 2297213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 159 - 197
Target Start/End: Complemental strand, 4268865 - 4268827
Alignment:
Q  159 tttaagatttttacacacatattaagaaatgcattaatt 197  Q
    |||||| ||||||||||||||||||||||||||||||||    
T  4268865 tttaaggtttttacacacatattaagaaatgcattaatt 4268827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 133 - 191
Target Start/End: Original strand, 12983067 - 12983125
Alignment:
Q  133 ctccctccgtttcaaaatgaatatcgtttaagatttttacacacatattaagaaatgca 191  Q
    |||||| ||||||||||||| | |||||| || | ||||||||||||||||||||||||    
T  12983067 ctcccttcgtttcaaaatgagtgtcgttttaggtgtttacacacatattaagaaatgca 12983125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 210 - 272
Target Start/End: Complemental strand, 47187811 - 47187749
Alignment:
Q  210 tgttattttaccaaattatcctaatcaattactggtttatttttcattaaagaaaaaataata 272  Q
    |||||||||||||||||||||| || ||||| || | | ||||| ||||||||||||||||||    
T  47187811 tgttattttaccaaattatccttattaattattgatatgttttttattaaagaaaaaataata 47187749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 138 - 191
Target Start/End: Complemental strand, 18270801 - 18270748
Alignment:
Q  138 tccgtttcaaaatgaatatcgtttaagatttttacacacatattaagaaatgca 191  Q
    ||||||||||||||| | |||||| || | ||||||||||||||||||||||||    
T  18270801 tccgtttcaaaatgagtgtcgttttaggtgtttacacacatattaagaaatgca 18270748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #61
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 141 - 182
Target Start/End: Complemental strand, 24793318 - 24793277
Alignment:
Q  141 gtttcaaaatgaatatcgtttaagatttttacacacatatta 182  Q
    |||||||||||||||||||||||| |||||||| ||||||||    
T  24793318 gtttcaaaatgaatatcgtttaaggtttttacatacatatta 24793277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #62
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 131 - 191
Target Start/End: Original strand, 715784 - 715844
Alignment:
Q  131 tactccctccgtttcaaaatgaatatcgtttaagatttttacacacatattaagaaatgca 191  Q
    |||||| ||||||||||||||| | |||||| || | |||||||| |||||||||||||||    
T  715784 tactccatccgtttcaaaatgagtgtcgttttagctctttacacatatattaagaaatgca 715844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #63
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 131 - 191
Target Start/End: Original strand, 12977607 - 12977667
Alignment:
Q  131 tactccctccgtttcaaaatgaatatcgtttaagatttttacacacatattaagaaatgca 191  Q
    |||||| | ||||||||||||| | |||||| || | ||||||||||||||||||||||||    
T  12977607 tactccattcgtttcaaaatgagtgtcgttttaggtgtttacacacatattaagaaatgca 12977667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #64
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 158 - 197
Target Start/End: Complemental strand, 10476353 - 10476314
Alignment:
Q  158 gtttaagatttttacacacatattaagaaatgcattaatt 197  Q
    ||||||| |||||||||||||||||| |||||||||||||    
T  10476353 gtttaaggtttttacacacatattaataaatgcattaatt 10476314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #65
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 138 - 193
Target Start/End: Complemental strand, 35778747 - 35778692
Alignment:
Q  138 tccgtttcaaaatgaatatcgtttaagatttttacacacatattaagaaatgcatt 193  Q
    ||||||||||||| ||| | ||||||| |||||||||| || ||||||||||||||    
T  35778747 tccgtttcaaaataaatgttgtttaaggtttttacacatatgttaagaaatgcatt 35778692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #66
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 141 - 179
Target Start/End: Original strand, 29635860 - 29635898
Alignment:
Q  141 gtttcaaaatgaatatcgtttaagatttttacacacata 179  Q
    |||||||||||||| ||||||||| ||||||||||||||    
T  29635860 gtttcaaaatgaatgtcgtttaaggtttttacacacata 29635898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #67
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 214 - 288
Target Start/End: Complemental strand, 36808090 - 36808017
Alignment:
Q  214 attttaccaaattatcctaatcaattactggtttatttttcattaaagaaaaaataatactttggaagtagtgta 288  Q
    |||||| ||||||| || |||||| || ||  || |||||||||||||||||||||| |||||| ||||||||||    
T  36808090 attttatcaaattacccgaatcaactattgagttgtttttcattaaagaaaaaataa-actttgaaagtagtgta 36808017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #68
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 131 - 188
Target Start/End: Complemental strand, 34275024 - 34274967
Alignment:
Q  131 tactccctccgtttcaaaatgaatatcgtttaagatttttacacacatattaagaaat 188  Q
    |||||||||||||| ||||| ||| |||||| || | ||||||| |||||||||||||    
T  34275024 tactccctccgttttaaaataaatgtcgttttaggtgtttacacgcatattaagaaat 34274967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #69
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 211 - 287
Target Start/End: Complemental strand, 7900087 - 7900011
Alignment:
Q  211 gttattttaccaaattatcctaatcaattactggtttatttttcattaaagaaaaaataatactttggaagtagtgt 287  Q
    ||||||||||||||||||||| |  || || |||||| |||| || ||||  |||| |||||||||| |||||||||    
T  7900087 gttattttaccaaattatcctcaataactattggtttgttttccactaaaacaaaagtaatactttgaaagtagtgt 7900011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #70
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 133 - 189
Target Start/End: Original strand, 34782456 - 34782512
Alignment:
Q  133 ctccctccgtttcaaaatgaatatcgtttaagatttttacacacatattaagaaatg 189  Q
    |||| ||| |||||||||||| |||||||||| ||||| |||||| || ||||||||    
T  34782456 ctccttccatttcaaaatgaacatcgtttaaggtttttgcacacaaataaagaaatg 34782512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #71
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 141 - 169
Target Start/End: Complemental strand, 42754757 - 42754729
Alignment:
Q  141 gtttcaaaatgaatatcgtttaagatttt 169  Q
    |||||||||||||||||||||||||||||    
T  42754757 gtttcaaaatgaatatcgtttaagatttt 42754729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0565 (Bit Score: 70; Significance: 2e-31; HSPs: 2)
Name: scaffold0565
Description:

Target: scaffold0565; HSP #1
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 129 - 308
Target Start/End: Original strand, 9865 - 10046
Alignment:
Q  129 tatactccctccgtttcaaaatgaatatcgtttaagatttttacacacatattaagaaatgcattaattnnnnnnngaa--gatgttattttaccaaatt 226  Q
    ||||||| ||| |||||||||||||| ||||||||  |||||||||| ||||||| |||||||||||||        ||  |||||||||||||||||||    
T  9865 tatactcgctctgtttcaaaatgaatgtcgtttaaagtttttacacatatattaaaaaatgcattaattaaaagaaaaaaagatgttattttaccaaatt 9964  T
Q  227 atcctaatcaattactggtttatttttcattaaagaaaaaataatactttggaagtagtgtatataatattaactgaagggt 308  Q
    ||| ||||||| || | |||| |||||| ||||||||||||||||| ||| |||||| |||||||| || ||| ||||||||    
T  9965 atcttaatcaactattagtttgtttttccttaaagaaaaaataatatttttgaagtattgtatatagtactaattgaagggt 10046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0565; HSP #2
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 214 - 308
Target Start/End: Original strand, 9639 - 9733
Alignment:
Q  214 attttaccaaattatcctaatcaattactggtttatttttcattaaagaaaaaataatactttggaagtagtgt-atataatattaactgaagggt 308  Q
    |||||||||||||||| ||||||| || ||  || |||||||||||||||||||||||| |||||||||||||| | ||| |||||| ||||||||    
T  9639 attttaccaaattatcataatcaactattgagttgtttttcattaaagaaaaaataata-tttggaagtagtgtaacatagtattaattgaagggt 9733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0983 (Bit Score: 68; Significance: 2e-30; HSPs: 1)
Name: scaffold0983
Description:

Target: scaffold0983; HSP #1
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 137 - 308
Target Start/End: Original strand, 606 - 778
Alignment:
Q  137 ctccgtttcaaaatgaatatcgtttaagatttttacacacatattaagaaatgcattaattnnnnnnnga-agatgttattttaccaaattatcctaatc 235  Q
    |||| ||||||||||||| |||||||||||||||||||| || ||||||||| |||| |||        | ||||||||||||||||||||||| |||||    
T  606 ctccatttcaaaatgaatgtcgtttaagatttttacacatatgttaagaaatacatttattaataaaaaagagatgttattttaccaaattatcttaatc 705  T
Q  236 aattactggtttatttttcattaaagaaaaaataatactttggaagtagtgtatataatattaactgaagggt 308  Q
    || || || | | ||||||||||||||||||| ||  |||||||| |||||||||||||||||| | ||||||    
T  706 aactattgatatgtttttcattaaagaaaaaacaagtctttggaattagtgtatataatattaattaaagggt 778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0136 (Bit Score: 68; Significance: 2e-30; HSPs: 1)
Name: scaffold0136
Description:

Target: scaffold0136; HSP #1
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 141 - 308
Target Start/End: Complemental strand, 9772 - 9605
Alignment:
Q  141 gtttcaaaatgaatatcgtttaagatttttacacacatattaagaaatgcattaattnnnnnnngaagatgttattttaccaaattatcctaatcaatta 240  Q
    ||||||| || ||| ||||||||| ||||| ||||||||||||||||| ||||||||        | ||||||||||||| |||||||||||||||| ||    
T  9772 gtttcaagataaatgtcgtttaaggtttttgcacacatattaagaaatacattaattaaaaaaata-gatgttattttactaaattatcctaatcaacta 9674  T
Q  241 ctggtttatttttcattaaagaa-aaaataatactttggaagtagtgtatataatattaactgaagggt 308  Q
     |||||| ||||||||||||||| ||||||||| |||| ||||||| |||||| |||||| ||||||||    
T  9673 ttggtttgtttttcattaaagaaaaaaataataatttgaaagtagtatatatagtattaattgaagggt 9605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0502 (Bit Score: 66; Significance: 4e-29; HSPs: 1)
Name: scaffold0502
Description:

Target: scaffold0502; HSP #1
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 207 - 308
Target Start/End: Original strand, 562 - 663
Alignment:
Q  207 agatgttattttaccaaattatcctaatcaattactggtttatttttcattaaagaaaaaataatactttggaagtagtgtatataatattaactgaagg 306  Q
    |||| |||||||||||||||||| ||||||| || || ||| ||||||||||||  ||||||||||||||||||||||||||||||||||||| ||||||    
T  562 agatattattttaccaaattatcataatcaactattgatttctttttcattaaaacaaaaataatactttggaagtagtgtatataatattaattgaagg 661  T
Q  307 gt 308  Q
    ||    
T  662 gt 663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026 (Bit Score: 58; Significance: 2e-24; HSPs: 1)
Name: scaffold0026
Description:

Target: scaffold0026; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 129 - 308
Target Start/End: Complemental strand, 4383 - 4202
Alignment:
Q  129 tatactccctccgtttcaaaatgaatatcgtttaagatttttacacacatattaagaaatgcattaattnnnnnnngaa--gatgttattttaccaaatt 226  Q
    ||||||| |||||||| ||||||||| | ||||||| |||||||||||||||||||||||  |||||           |  ||| |||||||||||||||    
T  4383 tatactctctccgttttaaaatgaattttgtttaaggtttttacacacatattaagaaatatattaaagaaaagaaatatagatattattttaccaaatt 4284  T
Q  227 atcctaatcaattactggtttatttttcattaaagaaaaaataatactttggaagtagtgtatataatattaactgaagggt 308  Q
    ||||| ||||| || |  ||| ||||| ||||||| ||||| |||||||| |||||||||||||||||||||| ||||||||    
T  4283 atccttatcaactattaatttgttttttattaaaggaaaaacaatactttagaagtagtgtatataatattaattgaagggt 4202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0294 (Bit Score: 56; Significance: 3e-23; HSPs: 1)
Name: scaffold0294
Description:

Target: scaffold0294; HSP #1
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 214 - 308
Target Start/End: Original strand, 3501 - 3596
Alignment:
Q  214 attttaccaaattatcctaatcaattactggtttatttttcattaaagaaaaaataatactttggaagtagtgt-atataatattaactgaagggt 308  Q
    |||||| ||||||||||||||||| || |||||| |||||||||||||||||||||||||||| |||||||||| | ||| |||||| ||||||||    
T  3501 attttatcaaattatcctaatcaactattggtttgtttttcattaaagaaaaaataatactttagaagtagtgtaacatagtattaattgaagggt 3596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0182 (Bit Score: 56; Significance: 3e-23; HSPs: 1)
Name: scaffold0182
Description:

Target: scaffold0182; HSP #1
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 209 - 308
Target Start/End: Original strand, 18247 - 18346
Alignment:
Q  209 atgttattttaccaaattatcctaatcaattactggtttatttttcattaaagaaaaaataatactttggaagtagtgtatataatattaactgaagggt 308  Q
    ||||||||||| ||||||||  ||||||| || |||||| |||||||||||||| |||||||||||||| || ||||||||||||| |||| ||||||||    
T  18247 atgttattttatcaaattattttaatcaactattggtttgtttttcattaaagataaaataatactttgaaaatagtgtatataatgttaattgaagggt 18346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0110 (Bit Score: 52; Significance: 8e-21; HSPs: 1)
Name: scaffold0110
Description:

Target: scaffold0110; HSP #1
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 214 - 308
Target Start/End: Original strand, 24737 - 24832
Alignment:
Q  214 attttaccaaattatcctaatcaattactggtttatttttcattaaagaaaaaataatactttggaagtagtgt-atataatattaactgaagggt 308  Q
    ||||||||||| |||||||||||| || |||||| ||||||||||||||||| ||||||||||||||||| ||| | ||| |||||| ||||||||    
T  24737 attttaccaaactatcctaatcaactattggtttgtttttcattaaagaaaagataatactttggaagtattgtaacatagtattaattgaagggt 24832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0048 (Bit Score: 52; Significance: 8e-21; HSPs: 1)
Name: scaffold0048
Description:

Target: scaffold0048; HSP #1
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 214 - 308
Target Start/End: Complemental strand, 62789 - 62694
Alignment:
Q  214 attttaccaaattatcctaatcaattactggtttatttttcattaaagaaaaaataatactttggaagtagtgt-atataatattaactgaagggt 308  Q
    ||||||||||||| |||||||||| || |||||| ||||||||||||||| || |||||| ||||||||||||| | |||||||||| ||||||||    
T  62789 attttaccaaattgtcctaatcaactattggtttgtttttcattaaagaagaagtaataccttggaagtagtgtaacataatattaattgaagggt 62694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0015 (Bit Score: 48; Significance: 2e-18; HSPs: 1)
Name: scaffold0015
Description:

Target: scaffold0015; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 214 - 308
Target Start/End: Original strand, 21078 - 21173
Alignment:
Q  214 attttaccaaattatcctaatcaattactggtttatttttcattaaagaaaaaataatactttggaagtagtgt-atataatattaactgaagggt 308  Q
    |||||||||||||||||||||||| || |||||| |||||||||||| | ||||||||  |||||||||||||| | ||| |||||| ||||||||    
T  21078 attttaccaaattatcctaatcaactattggtttgtttttcattaaaaagaaaataatcatttggaagtagtgtaacatagtattaattgaagggt 21173  T

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Target: scaffold0886 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0886
Description:

Target: scaffold0886; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 141 - 189
Target Start/End: Original strand, 4030 - 4078
Alignment:
Q  141 gtttcaaaatgaatatcgtttaagatttttacacacatattaagaaatg 189  Q
    |||||| ||||||| |||||||||||||| | |||||||||||||||||    
T  4030 gtttcacaatgaatgtcgtttaagattttgaaacacatattaagaaatg 4078  T

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Target: scaffold0078 (Bit Score: 32; Significance: 0.000000007; HSPs: 1)
Name: scaffold0078
Description:

Target: scaffold0078; HSP #1
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 251 - 308
Target Start/End: Original strand, 1446 - 1505
Alignment:
Q  251 tttcattaaagaaaa-aataatactttggaagtagtgt-atataatattaactgaagggt 308  Q
    ||||||||||||||| ||||||| |||||||||||||| | |||||||||| ||||||||    
T  1446 tttcattaaagaaaaaaataatattttggaagtagtgtaacataatattaaatgaagggt 1505  T

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Target: scaffold0332 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0332
Description:

Target: scaffold0332; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 131 - 191
Target Start/End: Original strand, 3733 - 3793
Alignment:
Q  131 tactccctccgtttcaaaatgaatatcgtttaagatttttacacacatattaagaaatgca 191  Q
    |||||| ||||||| ||||||| | |||||| || | |||||||||||| |||||||||||    
T  3733 tactccttccgttttaaaatgagtgtcgttttaggtctttacacacataataagaaatgca 3793  T

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