View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
Legend |
| Query |
| Query hiting target |
| Query hiting target's complemental strand |
| Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: 108_16_55 (Length: 239)
Name: 108_16_55
Description: Pascalseqs
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
[»] 108_16_55 |
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[»] chr6 (60 HSPs) |
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[»] chr8 (7 HSPs) |
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[»] scaffold0477 (2 HSPs) |
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[»] scaffold0288 (2 HSPs) |
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[»] chr7 (2 HSPs) |
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[»] scaffold0475 (2 HSPs) |
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Alignment Details
Target: chr6 (Bit Score: 110; Significance: 1e-55; HSPs: 60)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 110; E-Value: 1e-55
Query Start/End: Original strand, 114 - 239
Target Start/End: Complemental strand, 4613755 - 4613630
Alignment:
Q |
114 |
caattgccttttgcctcatcttctttcctttctctcccaccatcaattcattgaccaacttctccacctcatctctcttcacattggtgtcaatttccat |
213 |
Q |
|
|
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| |||||| ||||||||||||||||||||||||||||||||||| |
|
|
T |
4613755 |
caattgccttttgcctcattttctttcctttctctcccaccatcaattcattgaccagcttctctacctcatctctcttcacattggtgtcaatttccat |
4613656 |
T |
|
Q |
214 |
cccaatctcccattcattgcatatat |
239 |
Q |
|
|
|||||| ||||||||||||||||||| |
|
|
T |
4613655 |
cccaatttcccattcattgcatatat |
4613630 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #2
Raw Score: 107; E-Value: 9e-54
Query Start/End: Original strand, 116 - 234
Target Start/End: Original strand, 4585733 - 4585851
Alignment:
Q |
116 |
attgccttttgcctcatcttctttcctttctctcccaccatcaattcattgaccaacttctccacctcatctctcttcacattggtgtcaatttccatcc |
215 |
Q |
|
|
|||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| |||||||| |
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|
T |
4585733 |
attgccttttgcctcatcttctttccattctctcccaccatcaattcattgaccaacttctccacctcctctctcttcacattggtgtcaacttccatcc |
4585832 |
T |
|
Q |
216 |
caatctcccattcattgca |
234 |
Q |
|
|
||||||||||||||||||| |
|
|
T |
4585833 |
caatctcccattcattgca |
4585851 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #3
Raw Score: 107; E-Value: 9e-54
Query Start/End: Original strand, 1 - 119
Target Start/End: Complemental strand, 4613634 - 4613516
Alignment:
Q |
1 |
tatatatctgcagtttgctggctgatccgcgaaaaatggccaacacaacattggaactccagcacatatactttcagtggttgagttccatccacaatga |
100 |
Q |
|
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||||||||||| |
|
|
T |
4613634 |
tatatatctgcagtttgctggctgatccgcgaaaaatggccaacacaacattggcactccagcacatatgctttcagtggttgagttccatccacaatga |
4613535 |
T |
|
Q |
101 |
gtcaagaatccaccaattg |
119 |
Q |
|
|
||||||||||| ||||||| |
|
|
T |
4613534 |
gtcaagaatccgccaattg |
4613516 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #4
Raw Score: 102; E-Value: 9e-51
Query Start/End: Original strand, 2 - 119
Target Start/End: Original strand, 4557342 - 4557459
Alignment:
Q |
2 |
atatatctgcagtttgctggctgatccgcgaaaaatggccaacacaacattggaactccagcacatatactttcagtggttgagttccatccacaatgag |
101 |
Q |
|
|
|||||||||||||||||||||||||| || ||||||||||||||||||||||||||||||||| |||| ||||||||||||||||||||||||||||||| |
|
|
T |
4557342 |
atatatctgcagtttgctggctgatcagcaaaaaatggccaacacaacattggaactccagcagatatgctttcagtggttgagttccatccacaatgag |
4557441 |
T |
|
Q |
102 |
tcaagaatccaccaattg |
119 |
Q |
|
|
|||||||||||||||||| |
|
|
T |
4557442 |
tcaagaatccaccaattg |
4557459 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #5
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 2 - 114
Target Start/End: Original strand, 4560723 - 4560835
Alignment:
Q |
2 |
atatatctgcagtttgctggctgatccgcgaaaaatggccaacacaacattggaactccagcacatatactttcagtggttgagttccatccacaatgag |
101 |
Q |
|
|
|||||||| ||||||||||||||||| || |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||| |
|
|
T |
4560723 |
atatatcttcagtttgctggctgatctgcaaaaaatggccaacacaacattggaactccagcacatatgctttcagtggttgagttccatccgcaatgag |
4560822 |
T |
|
Q |
102 |
tcaagaatccacc |
114 |
Q |
|
|
||||||||||||| |
|
|
T |
4560823 |
tcaagaatccacc |
4560835 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #6
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 2 - 114
Target Start/End: Original strand, 4574525 - 4574637
Alignment:
Q |
2 |
atatatctgcagtttgctggctgatccgcgaaaaatggccaacacaacattggaactccagcacatatactttcagtggttgagttccatccacaatgag |
101 |
Q |
|
|
|||||||||||||||||||||||||||| |||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||| ||||||| |
|
|
T |
4574525 |
atatatctgcagtttgctggctgatccgaaaaaaatggccaacataacattggaactccagcacatatgctttcagtggttgagttccatccgcaatgag |
4574624 |
T |
|
Q |
102 |
tcaagaatccacc |
114 |
Q |
|
|
||||||||||||| |
|
|
T |
4574625 |
tcaagaatccacc |
4574637 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #7
Raw Score: 87; E-Value: 8e-42
Query Start/End: Original strand, 2 - 120
Target Start/End: Original strand, 4622359 - 4622477
Alignment:
Q |
2 |
atatatctgcagtttgctggctgatccgcgaaaaatggccaacacaacattggaactccagcacatatactttcagtggttgagttccatccacaatgag |
101 |
Q |
|
|
|||||||| ||||||| ||||||||| ||||||||||||||||||| ||||| ||||||||||||||| ||||| |||||||| |||||||||||||||| |
|
|
T |
4622359 |
atatatctacagtttgttggctgatcagcgaaaaatggccaacacagcattgaaactccagcacatatgctttcggtggttgaattccatccacaatgag |
4622458 |
T |
|
Q |
102 |
tcaagaatccaccaattgc |
120 |
Q |
|
|
||||||||||||||||||| |
|
|
T |
4622459 |
tcaagaatccaccaattgc |
4622477 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #8
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 2 - 119
Target Start/End: Original strand, 4598388 - 4598505
Alignment:
Q |
2 |
atatatctgcagtttgctggctgatccgcgaaaaatggccaacacaacattggaactccagcacatatactttcagtggttgagttccatccacaatgag |
101 |
Q |
|
|
|||||||||||||| ||| |||||||||||||||| || |||||||||||||| ||||| |||||||||||||||||||||||||||||||| ||||||| |
|
|
T |
4598388 |
atatatctgcagttggcttgctgatccgcgaaaaagggacaacacaacattggcactccggcacatatactttcagtggttgagttccatccgcaatgag |
4598487 |
T |
|
Q |
102 |
tcaagaatccaccaattg |
119 |
Q |
|
|
| |||||||||||||||| |
|
|
T |
4598488 |
ttaagaatccaccaattg |
4598505 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #9
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 4 - 119
Target Start/End: Original strand, 4579651 - 4579766
Alignment:
Q |
4 |
atatctgcagtttgctggctgatccgcgaaaaatggccaacacaacattggaactccagcacatatactttcagtggttgagttccatccacaatgagtc |
103 |
Q |
|
|
|||||||||| || |||| ||||| |||||||||||||||||||||||||||||||||||| |||| ||||||||| ||||||||||||| ||||||||| |
|
|
T |
4579651 |
atatctgcagcttactgggtgatcagcgaaaaatggccaacacaacattggaactccagcagatatgctttcagtgattgagttccatccgcaatgagtc |
4579750 |
T |
|
Q |
104 |
aagaatccaccaattg |
119 |
Q |
|
|
|||||||||||||||| |
|
|
T |
4579751 |
aagaatccaccaattg |
4579766 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #10
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 116 - 232
Target Start/End: Original strand, 4592328 - 4592444
Alignment:
Q |
116 |
attgccttttgcctcatcttctttcctttctctcccaccatcaattcattgaccaacttctccacctcatctctcttcacattggtgtcaatttccatcc |
215 |
Q |
|
|
|||||||||| ||||||||||||||||||||||||||||||||||||||||| | ||||||||||| |||||||| ||||| || ||||||||||||| |
|
|
T |
4592328 |
attgcctttttcctcatcttctttcctttctctcccaccatcaattcattgataagtttctccacctcctctctctttacattcgtatcaatttccatcc |
4592427 |
T |
|
Q |
216 |
caatctcccattcattg |
232 |
Q |
|
|
||||||||||||||||| |
|
|
T |
4592428 |
caatctcccattcattg |
4592444 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #11
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 35 - 119
Target Start/End: Original strand, 4592481 - 4592565
Alignment:
Q |
35 |
aatggccaacacaacattggaactccagcacatatactttcagtggttgagttccatccacaatgagtcaagaatccaccaattg |
119 |
Q |
|
|
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
T |
4592481 |
aatggccaacacaacattggaattccagcacatatactttcagtggttgagttccatccacaatgagtcaagaatccaccaattg |
4592565 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #12
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 121 - 239
Target Start/End: Original strand, 4557227 - 4557345
Alignment:
Q |
121 |
cttttgcctcatcttctttcctttctctcccaccatcaattcattgaccaacttctccacctcatctctcttcacattggtgtcaatttccatcccaatc |
220 |
Q |
|
|
||||| || |||||||||||||||||| ||| ||||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||| |||||| |
|
|
T |
4557227 |
ctttttccacatcttctttcctttctccccctccatcaattcattgaccaaattctctacctcatctctcttcacattggtgtcaatttccatgccaatc |
4557326 |
T |
|
Q |
221 |
tcccattcattgcatatat |
239 |
Q |
|
|
|||||| |||||| |||| |
|
|
T |
4557327 |
tcccatgtattgcaaatat |
4557345 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #13
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 6 - 119
Target Start/End: Original strand, 4461344 - 4461457
Alignment:
Q |
6 |
atctgcagtttgctggctgatccgcgaaaaatggccaacacaacattggaactccagcacatatactttcagtggttgagttccatccacaatgagtcaa |
105 |
Q |
|
|
|||| ||||||||||||||||| | || ||||||||||||||||| || |||||||||||||| |||||||||||||| |||||||||||||||||||| |
|
|
T |
4461344 |
atctacagtttgctggctgatcaccaaagaatggccaacacaacatcggcactccagcacatatgctttcagtggttgaattccatccacaatgagtcaa |
4461443 |
T |
|
Q |
106 |
gaatccaccaattg |
119 |
Q |
|
|
|||||||||||||| |
|
|
T |
4461444 |
gaatccaccaattg |
4461457 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #14
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 119 - 228
Target Start/End: Complemental strand, 4490387 - 4490278
Alignment:
Q |
119 |
gccttttgcctcatcttctttcctttctctcccaccatcaattcattgaccaacttctccacctcatctctcttcacattggtgtcaatttccatcccaa |
218 |
Q |
|
|
||||||||||||||||||||||||||||||||||||||||||||||||| || ||||| ||||| |||||||| |||||||| ||||||| |||||||| |
|
|
T |
4490387 |
gccttttgcctcatcttctttcctttctctcccaccatcaattcattgatcagtttctctacctcttctctctttacattggtatcaattttcatcccaa |
4490288 |
T |
|
Q |
219 |
tctcccattc |
228 |
Q |
|
|
|||||||||| |
|
|
T |
4490287 |
tctcccattc |
4490278 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #15
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 119 - 239
Target Start/End: Original strand, 4516421 - 4516541
Alignment:
Q |
119 |
gccttttgcctcatcttctttcctttctctcccaccatcaattcattgaccaacttctccacctcatctctcttcacattggtgtcaatttccatcccaa |
218 |
Q |
|
|
|||||||||||||||||||||||||| ||||||||||| |||||||||| || |||||||||||| ||||||||||||||||| |||||||| |||| |
|
|
T |
4516421 |
gccttttgcctcatcttctttcctttatctcccaccattaattcattgatcagcttctccacctcctctctcttcacattggtatcaatttctgctccaa |
4516520 |
T |
|
Q |
219 |
tctcccattcattgcatatat |
239 |
Q |
|
|
|||||||||||||||| |||| |
|
|
T |
4516521 |
tctcccattcattgcaaatat |
4516541 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #16
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 11 - 119
Target Start/End: Original strand, 4563937 - 4564045
Alignment:
Q |
11 |
cagtttgctggctgatccgcgaaaaatggccaacacaacattggaactccagcacatatactttcagtggttgagttccatccacaatgagtcaagaatc |
110 |
Q |
|
|
||||||| ||||||||| | || ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| |||||||||||||||| |
|
|
T |
4563937 |
cagtttgttggctgatcaccaaagaatggccaacacaacattggaactccagcacatatgctttcagtggttgagttccatccgcaatgagtcaagaatc |
4564036 |
T |
|
Q |
111 |
caccaattg |
119 |
Q |
|
|
| ||||||| |
|
|
T |
4564037 |
cgccaattg |
4564045 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #17
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 11 - 119
Target Start/End: Original strand, 4585862 - 4585970
Alignment:
Q |
11 |
cagtttgctggctgatccgcgaaaaatggccaacacaacattggaactccagcacatatactttcagtggttgagttccatccacaatgagtcaagaatc |
110 |
Q |
|
|
||||||| ||||||||| || | |||||||||||||||||||| |||||||||||||| |||||||||||||||||||||||||| ||||||||||||| |
|
|
T |
4585862 |
cagtttgttggctgatcagcaatgaatggccaacacaacattggcactccagcacatatgctttcagtggttgagttccatccacagtgagtcaagaatc |
4585961 |
T |
|
Q |
111 |
caccaattg |
119 |
Q |
|
|
||||||||| |
|
|
T |
4585962 |
caccaattg |
4585970 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #18
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 114 - 236
Target Start/End: Original strand, 4579527 - 4579649
Alignment:
Q |
114 |
caattgccttttgcctcatcttctttcctttctctcccaccatcaattcattgaccaacttctccacctcatctctcttcacattggtgtcaatttccat |
213 |
Q |
|
|
|||||||||||||||||||||||||| ||||||||||||||||||||||||| |||| |||||||||||| |||||||||||||| ||||| ||||| || |
|
|
T |
4579527 |
caattgccttttgcctcatcttctttgctttctctcccaccatcaattcattaaccagcttctccacctcctctctcttcacattagtgtcgatttcaat |
4579626 |
T |
|
Q |
214 |
cccaatctcccattcattgcata |
236 |
Q |
|
|
||||| | |||| |||||||| |
|
|
T |
4579627 |
tccaattttccatgtattgcata |
4579649 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #19
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 2 - 119
Target Start/End: Original strand, 4571189 - 4571306
Alignment:
Q |
2 |
atatatctgcagtttgctggctgatccgcgaaaaatggccaacacaacattggaactccagcacatatactttcagtggttgagttccatccacaatgag |
101 |
Q |
|
|
|||||||| ||||||||||||||||| || ||||||||| ||||||||||||||||||||| | |||| ||||| || ||||||||||||||||| |||| |
|
|
T |
4571189 |
atatatctacagtttgctggctgatcagcaaaaaatggctaacacaacattggaactccagtagatatgctttcggtcgttgagttccatccacagtgag |
4571288 |
T |
|
Q |
102 |
tcaagaatccaccaattg |
119 |
Q |
|
|
||||||| |||||||||| |
|
|
T |
4571289 |
tcaagaaaccaccaattg |
4571306 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #20
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 6 - 111
Target Start/End: Original strand, 4602010 - 4602115
Alignment:
Q |
6 |
atctgcagtttgctggctgatccgcgaaaaatggccaacacaacattggaactccagcacatatactttcagtggttgagttccatccacaatgagtcaa |
105 |
Q |
|
|
|||| ||||||| ||||||||| || ||||| |||||||||||||| || |||||||||||||| ||||||||||||||||||||||||||||||||||| |
|
|
T |
4602010 |
atctacagtttgttggctgatcggcaaaaaaaggccaacacaacatcggcactccagcacatatgctttcagtggttgagttccatccacaatgagtcaa |
4602109 |
T |
|
Q |
106 |
gaatcc |
111 |
Q |
|
|
|||||| |
|
|
T |
4602110 |
gaatcc |
4602115 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #21
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 6 - 117
Target Start/End: Complemental strand, 4267077 - 4266966
Alignment:
Q |
6 |
atctgcagtttgctggctgatccgcgaaaaatggccaacacaacattggaactccagcacatatactttcagtggttgagttccatccacaatgagtcaa |
105 |
Q |
|
|
|||| ||||||| ||||||||| | || |||||||||||||||||||| |||||||||||||| |||||||||||||| |||||||| ||||||||||| |
|
|
T |
4267077 |
atctacagtttgttggctgatcaccaaagaatggccaacacaacattggcactccagcacatatgctttcagtggttgaattccatccgcaatgagtcaa |
4266978 |
T |
|
Q |
106 |
gaatccaccaat |
117 |
Q |
|
|
|||||||||||| |
|
|
T |
4266977 |
gaatccaccaat |
4266966 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #22
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 140 - 234
Target Start/End: Original strand, 4457715 - 4457809
Alignment:
Q |
140 |
cctttctctcccaccatcaattcattgaccaacttctccacctcatctctcttcacattggtgtcaatttccatcccaatctcccattcattgca |
234 |
Q |
|
|
||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||| || || ||||||||||||||||| ||||||||||| |
|
|
T |
4457715 |
cctttttctcccaccatcaattcattgactaacttctccacctcatctctcttcacatttgtatcgatttccatcccaatctctcattcattgca |
4457809 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #23
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 114 - 232
Target Start/End: Original strand, 4563806 - 4563924
Alignment:
Q |
114 |
caattgccttttgcctcatcttctttcctttctctcccaccatcaattcattgaccaacttctccacctcatctctcttcacattggtgtcaatttccat |
213 |
Q |
|
|
||||||||||||||| ||||||||||||||||||||| ||||||||||||||| | ||||||||||| |||||||| ||||| || || |||||||| |
|
|
T |
4563806 |
caattgccttttgccgcatcttctttcctttctctcctgacatcaattcattgacaagtttctccacctcttctctctttacattcgtatcgatttccat |
4563905 |
T |
|
Q |
214 |
cccaatctcccattcattg |
232 |
Q |
|
|
||||||||||||||||||| |
|
|
T |
4563906 |
cccaatctcccattcattg |
4563924 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #24
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 122 - 239
Target Start/End: Original strand, 4571075 - 4571192
Alignment:
Q |
122 |
ttttgcctcatcttctttcctttctctcccaccatcaattcattgaccaacttctccacctcatctctcttcacattggtgtcaatttccatcccaatct |
221 |
Q |
|
|
|||| |||||||||||||||||| |||||||||||||||||||||||||| ||||||||||||| |||||||||||| || || ||||| || ||||||| |
|
|
T |
4571075 |
tttttcctcatcttctttcctttatctcccaccatcaattcattgaccaaattctccacctcatttctcttcacattagtatcgatttcgattccaatct |
4571174 |
T |
|
Q |
222 |
cccattcattgcatatat |
239 |
Q |
|
|
||||| |||||| |||| |
|
|
T |
4571175 |
cccatgtattgcagatat |
4571192 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #25
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 114 - 239
Target Start/End: Original strand, 4598266 - 4598391
Alignment:
Q |
114 |
caattgccttttgcctcatcttctttcctttctctcccaccatcaattcattgaccaacttctccacctcatctctcttcacattggtgtcaatttccat |
213 |
Q |
|
|
|||||| |||||||||||| ||||||||||| |||||| ||||||||| ||||||| |||||||||||| |||||||||||||| || ||||||| || |
|
|
T |
4598266 |
caattgtcttttgcctcattttctttcctttatctcccgacatcaattcgttgaccagcttctccacctcctctctcttcacattagtttcaattttgat |
4598365 |
T |
|
Q |
214 |
cccaatctcccattcattgcatatat |
239 |
Q |
|
|
|||||||||||||||||||| |||| |
|
|
T |
4598366 |
tccaatctcccattcattgcaaatat |
4598391 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #26
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 2 - 119
Target Start/End: Original strand, 4626168 - 4626285
Alignment:
Q |
2 |
atatatctgcagtttgctggctgatccgcgaaaaatggccaacacaacattggaactccagcacatatactttcagtggttgagttccatccacaatgag |
101 |
Q |
|
|
|||||||| || |||| ||||||||| || ||| ||||||||||| ||||||||||||||| ||||| |||||| |||||||||||||||||||||||| |
|
|
T |
4626168 |
atatatctacaatttgttggctgatcagcaaaatttggccaacacagcattggaactccagcgcatatgctttcaatggttgagttccatccacaatgag |
4626267 |
T |
|
Q |
102 |
tcaagaatccaccaattg |
119 |
Q |
|
|
| |||||||||||||||| |
|
|
T |
4626268 |
ttaagaatccaccaattg |
4626285 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #27
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 19 - 111
Target Start/End: Original strand, 4480927 - 4481019
Alignment:
Q |
19 |
tggctgatccgcgaaaaatggccaacacaacattggaactccagcacatatactttcagtggttgagttccatccacaatgagtcaagaatcc |
111 |
Q |
|
|
||||||||| || || |||||||||||||||||||| ||||||||||||| |||||||||||||||||||||||| ||||||||||||||||| |
|
|
T |
4480927 |
tggctgatcggcaaagaatggccaacacaacattggcactccagcacatacactttcagtggttgagttccatccgcaatgagtcaagaatcc |
4481019 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #28
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 23 - 119
Target Start/End: Complemental strand, 4490249 - 4490153
Alignment:
Q |
23 |
tgatccgcgaaaaatggccaacacaacattggaactccagcacatatactttcagtggttgagttccatccacaatgagtcaagaatccaccaattg |
119 |
Q |
|
|
||||| || ||||||||||||||||||||||| ||||||||||||||||| || || ||||||||||||||||||||||||||||||||||||||| |
|
|
T |
4490249 |
tgatcagcaaaaaatggccaacacaacattggcactccagcacatatactctccatgattgagttccatccacaatgagtcaagaatccaccaattg |
4490153 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #29
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 19 - 111
Target Start/End: Complemental strand, 4504295 - 4504203
Alignment:
Q |
19 |
tggctgatccgcgaaaaatggccaacacaacattggaactccagcacatatactttcagtggttgagttccatccacaatgagtcaagaatcc |
111 |
Q |
|
|
||||||||| | ||||||||||||||||||||||| ||||||||||| | |||||||||||||||||||||||||||||||||||||||||| |
|
|
T |
4504295 |
tggctgatcagaaaaaaatggccaacacaacattggcactccagcacaaacactttcagtggttgagttccatccacaatgagtcaagaatcc |
4504203 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #30
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 6 - 116
Target Start/End: Complemental strand, 4256523 - 4256412
Alignment:
Q |
6 |
atctgcagtttgctgg-ctgatccgcgaaaaatggccaacacaacattggaactccagcacatatactttcagtggttgagttccatccacaatgagtca |
104 |
Q |
|
|
|||| ||||||| ||| |||||| || ||||||||||||||||||||||||||||| ||||| || |||||| |||||||||||||||| |||||||||| |
|
|
T |
4256523 |
atctacagtttgttggtctgatcagcaaaaaatggccaacacaacattggaactccggcacaaatgctttcaatggttgagttccatcctcaatgagtca |
4256424 |
T |
|
Q |
105 |
agaatccaccaa |
116 |
Q |
|
|
|||||||||||| |
|
|
T |
4256423 |
agaatccaccaa |
4256412 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #31
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 119 - 234
Target Start/End: Original strand, 4480793 - 4480908
Alignment:
Q |
119 |
gccttttgcctcatcttctttcctttctctcccaccatcaattcattgaccaacttctccacctcatctctcttcacattggtgtcaatttccatcccaa |
218 |
Q |
|
|
||||||||| ||||||||||||||||||||||||||| ||||||||||| ||| ||||||| || ||||||||||||||||| || ||||| | |||| |
|
|
T |
4480793 |
gccttttgcttcatcttctttcctttctctcccaccaacaattcattgattaacctctccacatcttctctcttcacattggtatcgatttcgagtccaa |
4480892 |
T |
|
Q |
219 |
tctcccattcattgca |
234 |
Q |
|
|
|||||||||||||||| |
|
|
T |
4480893 |
tctcccattcattgca |
4480908 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #32
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 6 - 116
Target Start/End: Complemental strand, 4260065 - 4259955
Alignment:
Q |
6 |
atctgcagtttgctggctgatccgcgaaaaatggccaacacaacattggaactccagcacatatactttcagtggttgagttccatccacaatgagtcaa |
105 |
Q |
|
|
|||| ||||||| ||||||||| || ||||||||||||||||||||||||||| | ||||| || |||||| |||||||||||||||| |||||||| || |
|
|
T |
4260065 |
atctacagtttgttggctgatcagcaaaaaatggccaacacaacattggaacttcggcacaaatgctttcaatggttgagttccatccgcaatgagttaa |
4259966 |
T |
|
Q |
106 |
gaatccaccaa |
116 |
Q |
|
|
||||||||||| |
|
|
T |
4259965 |
gaatccaccaa |
4259955 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #33
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 123 - 228
Target Start/End: Original strand, 3171845 - 3171950
Alignment:
Q |
123 |
tttgcctcatcttctttcctttctctcccaccatcaattcattgaccaacttctccacctcatctctcttcacattggtgtcaatttccatcccaatctc |
222 |
Q |
|
|
|||||||||||||||||||||||||||||||||||||||| |||| || ||||| ||||| ||||||| |||||||| ||||||||||||||||||| |
|
|
T |
3171845 |
tttgcctcatcttctttcctttctctcccaccatcaattcgttgatcagtttctctacctcccctctctttacattggtatcaatttccatcccaatctt |
3171944 |
T |
|
Q |
223 |
ccattc |
228 |
Q |
|
|
|||||| |
|
|
T |
3171945 |
ccattc |
3171950 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #34
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 14 - 119
Target Start/End: Original strand, 4470032 - 4470137
Alignment:
Q |
14 |
tttgctggctgatccgcgaaaaatggccaacacaacattggaactccagcacatatactttcagtggttgagttccatccacaatgagtcaagaatccac |
113 |
Q |
|
|
|||||| ||||||| | || |||||||||||||||||||| |||||||| ||||| ||||||||||||||||||||||| ||||||||||||||||||| |
|
|
T |
4470032 |
tttgctagctgatcaccaaagaatggccaacacaacattggcactccagcgcatatgctttcagtggttgagttccatccgcaatgagtcaagaatccac |
4470131 |
T |
|
Q |
114 |
caattg |
119 |
Q |
|
|
| |||| |
|
|
T |
4470132 |
cgattg |
4470137 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #35
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 6 - 111
Target Start/End: Original strand, 4617243 - 4617348
Alignment:
Q |
6 |
atctgcagtttgctggctgatccgcgaaaaatggccaacacaacattggaactccagcacatatactttcagtggttgagttccatccacaatgagtcaa |
105 |
Q |
|
|
|||| |||| || |||||| || || ||||||||||||||||||||||| |||||||| |||||||||||||||||||| |||||||| ||||||||||| |
|
|
T |
4617243 |
atctacagtctgttggctggtcggcaaaaaatggccaacacaacattggcactccagcgcatatactttcagtggttgaattccatccgcaatgagtcaa |
4617342 |
T |
|
Q |
106 |
gaatcc |
111 |
Q |
|
|
|||||| |
|
|
T |
4617343 |
gaatcc |
4617348 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #36
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 120 - 234
Target Start/End: Complemental strand, 4515152 - 4515038
Alignment:
Q |
120 |
ccttttgcctcatcttctttcctttctctcccaccatcaattcattgaccaacttctccacctcatctctcttcacattggtgtcaatttccatcccaat |
219 |
Q |
|
|
|||||| |||||| || |||||||||||||||||||||||||||||||| | ||| || ||||| |||||||||||||| | || ||||| |||||||| |
|
|
T |
4515152 |
cctttttcctcattttatttcctttctctcccaccatcaattcattgacaagcttttcaacctcctctctcttcacattcatatcgatttcgatcccaat |
4515053 |
T |
|
Q |
220 |
ctcccattcattgca |
234 |
Q |
|
|
||||||||||||||| |
|
|
T |
4515052 |
ctcccattcattgca |
4515038 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #37
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 121 - 234
Target Start/End: Original strand, 4469905 - 4470018
Alignment:
Q |
121 |
cttttgcctcatcttctttcctttctctcccaccatcaattcattgaccaacttctccacctcatctctcttcacattggtgtcaatttccatcccaatc |
220 |
Q |
|
|
||||| ||||||||||||||| |||||||| ||||||||||||||||| | |||||||||||||||||||||||||| | || ||||| | |||||| |
|
|
T |
4469905 |
cttttccctcatcttctttccattctctccaaccatcaattcattgactagcttctccacctcatctctcttcacatctttatcgatttcaagtccaatc |
4470004 |
T |
|
Q |
221 |
tcccattcattgca |
234 |
Q |
|
|
|||||||||||||| |
|
|
T |
4470005 |
tcccattcattgca |
4470018 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #38
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 38 - 119
Target Start/End: Original strand, 4506110 - 4506191
Alignment:
Q |
38 |
ggccaacacaacattggaactccagcacatatactttcagtggttgagttccatccacaatgagtcaagaatccaccaattg |
119 |
Q |
|
|
|||||||||| |||||| |||||||| ||||| ||||||||||||||||||||||| ||||||||||||||||||||||||| |
|
|
T |
4506110 |
ggccaacacagcattggcactccagcgcatatgctttcagtggttgagttccatccgcaatgagtcaagaatccaccaattg |
4506191 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #39
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 120 - 228
Target Start/End: Complemental strand, 4256643 - 4256535
Alignment:
Q |
120 |
ccttttgcctcatcttctttcctttctctcccaccatcaattcattgaccaacttctccacctcatctctcttcacattggtgtcaatttccatcccaat |
219 |
Q |
|
|
||||||||||||||||||||||||| |||||| |||||||||||||| || |||||||||||||||||||||||||| || | ||||| || ||||| |
|
|
T |
4256643 |
ccttttgcctcatcttctttcctttttctcccgacatcaattcattgatcagattctccacctcatctctcttcacattagtattgatttcaattccaat |
4256544 |
T |
|
Q |
220 |
ctcccattc |
228 |
Q |
|
|
||||||||| |
|
|
T |
4256543 |
ctcccattc |
4256535 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #40
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 117 - 226
Target Start/End: Complemental strand, 4299780 - 4299671
Alignment:
Q |
117 |
ttgccttttgcctcatcttctttcctttctctcccaccatcaattcattgaccaacttctccacctcatctctcttcacattggtgtcaatttccatccc |
216 |
Q |
|
|
|||||||||| |||||||| | ||||||||||||||||||||||||||||| || ||| |||||||| |||||| ||||||| || || ||||| || || |
|
|
T |
4299780 |
ttgccttttgtctcatcttatctcctttctctcccaccatcaattcattgatcagcttttccacctcctctctcctcacatttgtatcgatttcgattcc |
4299681 |
T |
|
Q |
217 |
aatctcccat |
226 |
Q |
|
|
|||||||||| |
|
|
T |
4299680 |
aatctcccat |
4299671 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #41
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 120 - 197
Target Start/End: Original strand, 4461224 - 4461301
Alignment:
Q |
120 |
ccttttgcctcatcttctttcctttctctcccaccatcaattcattgaccaacttctccacctcatctctcttcacat |
197 |
Q |
|
|
|||||||||||||||||||||| ||||||| ||||||||||| ||||||||||||||||||||||| |||||||||| |
|
|
T |
4461224 |
ccttttgcctcatcttctttccaatctctccaaccatcaattcgttgaccaacttctccacctcatccctcttcacat |
4461301 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #42
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 119 - 228
Target Start/End: Complemental strand, 4504429 - 4504320
Alignment:
Q |
119 |
gccttttgcctcatcttctttcctttctctcccaccatcaattcattgaccaacttctccacctcatctctcttcacattggtgtcaatttccatcccaa |
218 |
Q |
|
|
||||||||||||||||||||||||||||||||||||||||||||||| | | ||||| ||||| ||||||| ||||||| ||||| | |||||||| |
|
|
T |
4504429 |
gccttttgcctcatcttctttcctttctctcccaccatcaattcattaataagtttctctacctcttctctctgtacattggcatcaatcttcatcccaa |
4504330 |
T |
|
Q |
219 |
tctcccattc |
228 |
Q |
|
|
|||||||||| |
|
|
T |
4504329 |
tctcccattc |
4504320 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #43
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 122 - 239
Target Start/End: Original strand, 4574411 - 4574528
Alignment:
Q |
122 |
ttttgcctcatcttctttcctttctctcccaccatcaattcattgaccaacttctccacctcatctctcttcacattggtgtcaatttccatcccaatct |
221 |
Q |
|
|
||||||||||||||||||||||| ||||| ||||||||||||||||| ||||||||||| || ||||| ||||| || || |||||| | ||||||| |
|
|
T |
4574411 |
ttttgcctcatcttctttcctttatctccggacatcaattcattgaccagtttctccacctcctccctctttacattagtatcgatttcctttccaatct |
4574510 |
T |
|
Q |
222 |
cccattcattgcatatat |
239 |
Q |
|
|
||||||||||||| |||| |
|
|
T |
4574511 |
cccattcattgcaaatat |
4574528 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #44
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 23 - 119
Target Start/End: Original strand, 3171979 - 3172075
Alignment:
Q |
23 |
tgatccgcgaaaaatggccaacacaacattggaactccagcacatatactttcagtggttgagttccatccacaatgagtcaagaatccaccaattg |
119 |
Q |
|
|
||||| || |||||||||| |||||||||||| | ||||||||||| |||||| ||||||||||||||||| || |||||||||||||| ||||||| |
|
|
T |
3171979 |
tgatcagcaaaaaatggcctacacaacattggcattccagcacatacactttccgtggttgagttccatccgcagtgagtcaagaatccgccaattg |
3172075 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #45
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 122 - 230
Target Start/End: Complemental strand, 4267195 - 4267087
Alignment:
Q |
122 |
ttttgcctcatcttctttcctttctctcccaccatcaattcattgaccaacttctccacctcatctctcttcacattggtgtcaatttccatcccaatct |
221 |
Q |
|
|
|||||| ||||| | |||||||||||||||||||||||||||||||| |||||||| || ||||||||||||||||| || | ||||| | ||||||| |
|
|
T |
4267195 |
ttttgcttcatcatatttcctttctctcccaccatcaattcattgactaacttctcgacgtcatctctcttcacatttgtattgatttcgagtccaatct |
4267096 |
T |
|
Q |
222 |
cccattcat |
230 |
Q |
|
|
||||||||| |
|
|
T |
4267095 |
cccattcat |
4267087 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #46
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 119 - 223
Target Start/End: Original strand, 4568156 - 4568260
Alignment:
Q |
119 |
gccttttgcctcatcttctttcctttctctcccaccatcaattcattgaccaacttctccacctcatctctcttcacattggtgtcaatttccatcccaa |
218 |
Q |
|
|
||||||||||||||||| |||||||||| ||||||||| |||||||| | || |||||||||||| |||||||||||||| || |||||||| || || | |
|
|
T |
4568156 |
gccttttgcctcatcttttttcctttctgtcccaccattaattcattcatcagcttctccacctcctctctcttcacatttgtatcaatttcgattccga |
4568255 |
T |
|
Q |
219 |
tctcc |
223 |
Q |
|
|
||||| |
|
|
T |
4568256 |
tctcc |
4568260 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #47
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 2 - 116
Target Start/End: Original strand, 4516538 - 4516652
Alignment:
Q |
2 |
atatatctgcagtttgctggctgatccgcgaaaaatggccaacacaacattggaactccagcacatatactttcagtggttgagttccatccacaatgag |
101 |
Q |
|
|
||||||||||| |||| |||||| || || ||||| ||||||||||||||||| ||||| ||||| || ||||| | || ||||||||||||||||||| |
|
|
T |
4516538 |
atatatctgcaatttgttggctgctcagcaaaaaaaggccaacacaacattggtactccggcacagatgctttccattgtggagttccatccacaatgag |
4516637 |
T |
|
Q |
102 |
tcaagaatccaccaa |
116 |
Q |
|
|
|||||||||| |||| |
|
|
T |
4516638 |
tcaagaatcctccaa |
4516652 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #48
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 35 - 111
Target Start/End: Original strand, 4457844 - 4457920
Alignment:
Q |
35 |
aatggccaacacaacattggaactccagcacatatactttcagtggttgagttccatccacaatgagtcaagaatcc |
111 |
Q |
|
|
|||||||||| || |||||| |||||||| ||||| ||||||||||||||||| ||||||||||||||||||||||| |
|
|
T |
4457844 |
aatggccaacgcagcattggcactccagcgcatatgctttcagtggttgagtttcatccacaatgagtcaagaatcc |
4457920 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #49
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 119 - 231
Target Start/End: Original strand, 4601889 - 4602001
Alignment:
Q |
119 |
gccttttgcctcatcttctttcctttctctcccaccatcaattcattgaccaacttctccacctcatctctcttcacattggtgtcaatttccatcccaa |
218 |
Q |
|
|
|||||||||||||||||||| ||||| ||||| | |||| |||||||| || |||| ||| ||| |||||||||||||| || || |||||||| |||| |
|
|
T |
4601889 |
gccttttgcctcatcttcttgcctttatctccggctatcacttcattgatcagcttcgccaactcctctctcttcacatttgtatcgatttccataccaa |
4601988 |
T |
|
Q |
219 |
tctcccattcatt |
231 |
Q |
|
|
||||||||||||| |
|
|
T |
4601989 |
tctcccattcatt |
4602001 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #50
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 38 - 117
Target Start/End: Original strand, 4493208 - 4493287
Alignment:
Q |
38 |
ggccaacacaacattggaactccagcacatatactttcagtggttgagttccatccacaatgagtcaagaatccaccaat |
117 |
Q |
|
|
||||||||||||||||| ||||| |||||||| ||| || |||||||||||||||||||||||||||||||||||||| |
|
|
T |
4493208 |
ggccaacacaacattggcactccggcacatatgtttttggtagttgagttccatccacaatgagtcaagaatccaccaat |
4493287 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #51
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 6 - 119
Target Start/End: Complemental strand, 4515032 - 4514919
Alignment:
Q |
6 |
atctgcagtttgctggctgatccgcgaaaaatggccaacacaacattggaactccagcacatatactttcagtggttgagttccatccacaatgagtcaa |
105 |
Q |
|
|
|||| ||||||| ||| ||||| | || ||| ||||||| | |||||| |||||||| ||||| || |||||||||||||||||||| ||||||||||| |
|
|
T |
4515032 |
atctacagtttgttggttgatcaccaaagaattgccaacaaagcattggcactccagcgcatatgctctcagtggttgagttccatccgcaatgagtcaa |
4514933 |
T |
|
Q |
106 |
gaatccaccaattg |
119 |
Q |
|
|
|||||| ||||||| |
|
|
T |
4514932 |
gaatccgccaattg |
4514919 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #52
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 119 - 239
Target Start/End: Original strand, 4560606 - 4560726
Alignment:
Q |
119 |
gccttttgcctcatcttctttcctttctctcccaccatcaattcattgaccaacttctccacctcatctctcttcacattggtgtcaatttccatcccaa |
218 |
Q |
|
|
|||||||||||||||||||||||||| |||| ||||||||||||||||| |||||||| || || ||||| ||||| || |||||||| | |||| |
|
|
T |
4560606 |
gccttttgcctcatcttctttcctttatctcaggacatcaattcattgaccagtttctccacgtcctccctctttacatttgtatcaatttcgtttccaa |
4560705 |
T |
|
Q |
219 |
tctcccattcattgcatatat |
239 |
Q |
|
|
||| |||||||||||| |||| |
|
|
T |
4560706 |
tcttccattcattgcaaatat |
4560726 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #53
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 119 - 239
Target Start/End: Original strand, 4626051 - 4626171
Alignment:
Q |
119 |
gccttttgcctcatcttctttcctttctctcccaccatcaattcattgaccaacttctccacctcatctctcttcacattggtgtcaatttccatcccaa |
218 |
Q |
|
|
||||||||||||||||||||||| || ||||| |||||||| |||||| || ||||| ||| | || ||||||||||| | || |||||||| |||| |
|
|
T |
4626051 |
gccttttgcctcatcttctttccgttatctcctgccatcaatgcattgatcagtttctctaccccctccctcttcacattagcatcgatttccattccaa |
4626150 |
T |
|
Q |
219 |
tctcccattcattgcatatat |
239 |
Q |
|
|
|||||||||||||||| |||| |
|
|
T |
4626151 |
tctcccattcattgcaaatat |
4626171 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #54
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 120 - 234
Target Start/End: Original strand, 4505958 - 4506072
Alignment:
Q |
120 |
ccttttgcctcatcttctttcctttctctcccaccatcaattcattgaccaacttctccacctcatctctcttcacattggtgtcaatttccatcccaat |
219 |
Q |
|
|
|||||| ||||||||| |||||||||||||| ||||| | ||||| ||||| |||||| || | ||||| |||||||| || |||||||| || ||||| |
|
|
T |
4505958 |
cctttttcctcatcttgtttcctttctctccaaccataatttcatcgaccagcttctctacattttctctattcacattagtatcaatttcgattccaat |
4506057 |
T |
|
Q |
220 |
ctcccattcattgca |
234 |
Q |
|
|
|||| |||||||||| |
|
|
T |
4506058 |
ctccaattcattgca |
4506072 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #55
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 120 - 228
Target Start/End: Complemental strand, 4260185 - 4260077
Alignment:
Q |
120 |
ccttttgcctcatcttctttcctttctctcccaccatcaattcattgaccaacttctccacctcatctctcttcacattggtgtcaatttccatcccaat |
219 |
Q |
|
|
|||||||||||||||||||||||| ||||| ||| | |||||||| || |||| ||||||||||||| |||||||| || | |||||| || ||||| |
|
|
T |
4260185 |
ccttttgcctcatcttctttccttcttctcctgacataatttcattgatcagcttcgccacctcatctcttttcacattagtattaatttcaattccaat |
4260086 |
T |
|
Q |
220 |
ctcccattc |
228 |
Q |
|
|
||||||||| |
|
|
T |
4260085 |
ctcccattc |
4260077 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #56
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 119 - 231
Target Start/End: Original strand, 4617122 - 4617234
Alignment:
Q |
119 |
gccttttgcctcatcttctttcctttctctcccaccatcaattcattgaccaacttctccacctcatctctcttcacattggtgtcaatttccatcccaa |
218 |
Q |
|
|
||||||||| |||| ||||||||||| ||||| | |||| |||||||| || ||| ||| ||| |||||||||||||| || || |||||||| |||| |
|
|
T |
4617122 |
gccttttgcttcattttctttcctttatctccggctatcacttcattgatcagctttgccaactcctctctcttcacattcgtatcgatttccataccaa |
4617221 |
T |
|
Q |
219 |
tctcccattcatt |
231 |
Q |
|
|
||||||||||||| |
|
|
T |
4617222 |
tctcccattcatt |
4617234 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #57
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 65 - 119
Target Start/End: Complemental strand, 4299673 - 4299619
Alignment:
Q |
65 |
catatactttcagtggttgagttccatccacaatgagtcaagaatccaccaattg |
119 |
Q |
|
|
||||| |||||| ||||||||||||||||||| |||||||||||||||||||||| |
|
|
T |
4299673 |
catatgctttcaatggttgagttccatccacagtgagtcaagaatccaccaattg |
4299619 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #58
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 119 - 239
Target Start/End: Original strand, 4622242 - 4622362
Alignment:
Q |
119 |
gccttttgcctcatcttctttcctttctctcccaccatcaattcattgaccaacttctccacctcatctctcttcacattggtgtcaatttccatcccaa |
218 |
Q |
|
|
|||||||| ||||||||||||||||| |||||| |||||||||||||| || ||| |||||| ||||| |||||||| || | ||||| || |||| |
|
|
T |
4622242 |
gccttttgtctcatcttctttcctttatctcccgacatcaattcattgatcagattcgacacctcctctcttttcacattagtattgatttcgattccaa |
4622341 |
T |
|
Q |
219 |
tctcccattcattgcatatat |
239 |
Q |
|
|
|||||||| |||||| |||| |
|
|
T |
4622342 |
tctcccatgaattgcagatat |
4622362 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #59
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 2 - 110
Target Start/End: Original strand, 4568273 - 4568381
Alignment:
Q |
2 |
atatatctgcagtttgctggctgatccgcgaaaaatggccaacacaacattggaactccagcacatatactttcagtggttgagttccatccacaatgag |
101 |
Q |
|
|
||||||||||||| || |||||| || | ||||| |||||||| |||||||| |||| ||||| || ||||| || ||||||||||||||||||| |
|
|
T |
4568273 |
atatatctgcagtatgttggctgctcagaaaaaaaaggccaacataacattggtactctggcacaaatgctttccaatgtggagttccatccacaatgag |
4568372 |
T |
|
Q |
102 |
tcaagaatc |
110 |
Q |
|
|
||||||||| |
|
|
T |
4568373 |
tcaagaatc |
4568381 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #60
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 48 - 118
Target Start/End: Complemental strand, 4391996 - 4391926
Alignment:
Q |
48 |
acattggaactccagcacatatactttcagtggttgagttccatccacaatgagtcaagaatccaccaatt |
118 |
Q |
|
|
|||||||||||| || ||| || |||||| ||| |||||| ||||||||||| || |||||||||| |||| |
|
|
T |
4391996 |
acattggaactctagaacaaatgctttcaatgggtgagtttcatccacaatgcgttaagaatccacaaatt |
4391926 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8 (Bit Score: 103; Significance: 2e-51; HSPs: 7)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 121 - 239
Target Start/End: Complemental strand, 16686297 - 16686179
Alignment:
Q |
121 |
cttttgcctcatcttctttcctttctctcccaccatcaattcattgaccaacttctccacctcatctctcttcacattggtgtcaatttccatcccaatc |
220 |
Q |
|
|
||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| |||||| |
|
|
T |
16686297 |
ctttttcctcatcttctttcctttctctcccaccatcaattcattgaccaatttctccacctcatctctcttcacattggtgtcaatttccatgccaatc |
16686198 |
T |
|
Q |
221 |
tcccattcattgcatatat |
239 |
Q |
|
|
|||||||||||||| |||| |
|
|
T |
16686197 |
tcccattcattgcaaatat |
16686179 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #2
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 2 - 119
Target Start/End: Complemental strand, 16686182 - 16686065
Alignment:
Q |
2 |
atatatctgcagtttgctggctgatccgcgaaaaatggccaacacaacattggaactccagcacatatactttcagtggttgagttccatccacaatgag |
101 |
Q |
|
|
||||||||||| |||||||||||||| || ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| |
|
|
T |
16686182 |
atatatctgcattttgctggctgatcagcaaaaaatggccaacacaacattggaactccagcatatatactttcagtggttgagttccatccacaatgag |
16686083 |
T |
|
Q |
102 |
tcaagaatccaccaattg |
119 |
Q |
|
|
| ||||||||||| |||| |
|
|
T |
16686082 |
ttaagaatccaccgattg |
16686065 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #3
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 121 - 227
Target Start/End: Complemental strand, 20863873 - 20863767
Alignment:
Q |
121 |
cttttgcctcatcttctttcctttctctcccaccatcaattcattgaccaacttctccacctcatctctcttcacattggtgtcaatttccatcccaatc |
220 |
Q |
|
|
||||||||||||| || |||||||||||||||||||||||||||| |||| | |||||||||| |||||||| ||||||||||||||||| ||||||||| |
|
|
T |
20863873 |
cttttgcctcatcctccttcctttctctcccaccatcaattcatttaccagcatctccacctcctctctcttgacattggtgtcaatttcgatcccaatc |
20863774 |
T |
|
Q |
221 |
tcccatt |
227 |
Q |
|
|
||||||| |
|
|
T |
20863773 |
tcccatt |
20863767 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #4
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 5 - 119
Target Start/End: Complemental strand, 20863755 - 20863641
Alignment:
Q |
5 |
tatctgcagtttgctggctgatccgcgaaaaatggccaacacaacattggaactccagcacatatactttcagtggttgagttccatccacaatgagtca |
104 |
Q |
|
|
||||||||||||| |||||||| || ||||||||||| ||||||||||| |||||||||||||| || ||| ||||||||||||||||||||||||| | |
|
|
T |
20863755 |
tatctgcagtttgtcggctgatcagcaaaaaatggccagcacaacattggcactccagcacatatgctctcaatggttgagttccatccacaatgagtta |
20863656 |
T |
|
Q |
105 |
agaatccaccaattg |
119 |
Q |
|
|
||||||||||||| |
|
|
T |
20863655 |
gaaatccaccaattg |
20863641 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #5
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 6 - 111
Target Start/End: Original strand, 1674447 - 1674552
Alignment:
Q |
6 |
atctgcagtttgctggctgatccgcgaaaaatggccaacacaacattggaactccagcacatatactttcagtggttgagttccatccacaatgagtcaa |
105 |
Q |
|
|
|||| ||||||| ||||||||| || ||||||||||||||||||||||| |||||||| ||||| ||||||||||||||||||||||| || || ||||| |
|
|
T |
1674447 |
atctacagtttgttggctgatcagcaaaaaatggccaacacaacattggcactccagcgcatatgctttcagtggttgagttccatccgcagtgtgtcaa |
1674546 |
T |
|
Q |
106 |
gaatcc |
111 |
Q |
|
|
|||||| |
|
|
T |
1674547 |
gaatcc |
1674552 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #6
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 119 - 231
Target Start/End: Original strand, 1674326 - 1674438
Alignment:
Q |
119 |
gccttttgcctcatcttctttcctttctctcccaccatcaattcattgaccaacttctccacctcatctctcttcacattggtgtcaatttccatcccaa |
218 |
Q |
|
|
||||||||||||||||| ||||| ||||||||||||||||||||||||| | |||||||| | |||||||||||||| || ||||||||||| |||| |
|
|
T |
1674326 |
gccttttgcctcatcttttttccattctctcccaccatcaattcattgataagcttctccaaaccctctctcttcacattcgtatcaatttccataccaa |
1674425 |
T |
|
Q |
219 |
tctcccattcatt |
231 |
Q |
|
|
||| ||||||||| |
|
|
T |
1674426 |
tcttccattcatt |
1674438 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #7
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 79 - 119
Target Start/End: Complemental strand, 1969181 - 1969141
Alignment:
Q |
79 |
ggttgagttccatccacaatgagtcaagaatccaccaattg |
119 |
Q |
|
|
|||||| ||||| |||||||||||||||||||||||||||| |
|
|
T |
1969181 |
ggttgaattccagccacaatgagtcaagaatccaccaattg |
1969141 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3 (Bit Score: 78; Significance: 2e-36; HSPs: 2)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 6 - 119
Target Start/End: Original strand, 1281335 - 1281448
Alignment:
Q |
6 |
atctgcagtttgctggctgatccgcgaaaaatggccaacacaacattggaactccagcacatatactttcagtggttgagttccatccacaatgagtcaa |
105 |
Q |
|
|
|||| |||| || ||||||||| || ||||||||||||||||||||||| |||||||||||||| ||||||||||||||||||||||| ||||||||||| |
|
|
T |
1281335 |
atctacagtctgttggctgatcagcaaaaaatggccaacacaacattggcactccagcacatatgctttcagtggttgagttccatccgcaatgagtcaa |
1281434 |
T |
|
Q |
106 |
gaatccaccaattg |
119 |
Q |
|
|
||||||||| |||| |
|
|
T |
1281435 |
gaatccaccgattg |
1281448 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #2
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 155 - 231
Target Start/End: Original strand, 1281250 - 1281326
Alignment:
Q |
155 |
atcaattcattgaccaacttctccacctcatctctcttcacattggtgtcaatttccatcccaatctcccattcatt |
231 |
Q |
|
|
||||||||||||| |||||| ||||||| |||||||||||||| || || |||||||| ||||||| ||||||||| |
|
|
T |
1281250 |
atcaattcattgatcaacttagccacctcctctctcttcacatttgtatcgatttccataccaatcttccattcatt |
1281326 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0477 (Bit Score: 76; Significance: 3e-35; HSPs: 2)
Name: scaffold0477
Description:
Target: scaffold0477; HSP #1
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 12 - 119
Target Start/End: Complemental strand, 4591 - 4484
Alignment:
Q |
12 |
agtttgctggctgatccgcgaaaaatggccaacacaacattggaactccagcacatatactttcagtggttgagttccatccacaatgagtcaagaatcc |
111 |
Q |
|
|
|||||| ||||||||| |||||||||||||||||||||||||| ||||| ||||||| |||||| |||||||||||||||| ||||||||||||||||| |
|
|
T |
4591 |
agtttgttggctgatcggcgaaaaatggccaacacaacattggcactcctacacatatgctttcaatggttgagttccatccgcaatgagtcaagaatcc |
4492 |
T |
|
Q |
112 |
accaattg |
119 |
Q |
|
|
|||||||| |
|
|
T |
4491 |
accaattg |
4484 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0477; HSP #2
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 119 - 226
Target Start/End: Complemental strand, 4718 - 4611
Alignment:
Q |
119 |
gccttttgcctcatcttctttcctttctctcccaccatcaattcattgaccaacttctccacctcatctctcttcacattggtgtcaatttccatcccaa |
218 |
Q |
|
|
|||||||||||||||||| ||||||| |||||| |||||||||||||| || ||| |||| |||||||||||||| || ||||||||||| ||| |
|
|
T |
4718 |
gccttttgcctcatcttcattcctttatctcccgacatcaattcattgatcatattcgttaccttctctctcttcacattagtatcaatttccataccag |
4619 |
T |
|
Q |
219 |
tctcccat |
226 |
Q |
|
|
|||||||| |
|
|
T |
4618 |
tctcccat |
4611 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5 (Bit Score: 72; Significance: 7e-33; HSPs: 4)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 6 - 117
Target Start/End: Original strand, 24103220 - 24103331
Alignment:
Q |
6 |
atctgcagtttgctggctgatccgcgaaaaatggccaacacaacattggaactccagcacatatactttcagtggttgagttccatccacaatgagtcaa |
105 |
Q |
|
|
|||| ||||||| ||| ||||| | || |||||||||||||||||||| |||||||||||||| ||||||||||||||||||||||| ||||||||||| |
|
|
T |
24103220 |
atctacagtttgttggttgatcaccaaagaatggccaacacaacattggcactccagcacatatgctttcagtggttgagttccatccgcaatgagtcaa |
24103319 |
T |
|
Q |
106 |
gaatccaccaat |
117 |
Q |
|
|
|||||||||||| |
|
|
T |
24103320 |
gaatccaccaat |
24103331 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #2
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 120 - 230
Target Start/End: Original strand, 24103100 - 24103210
Alignment:
Q |
120 |
ccttttgcctcatcttctttcctttctctcccaccatcaattcattgaccaacttctccacctcatctctcttcacattggtgtcaatttccatcccaat |
219 |
Q |
|
|
|||||||| ||||| ||||||| |||||||||||||||||||||||||| |||||||| || ||||||||||||||||| || || ||||| | ||||| |
|
|
T |
24103100 |
ccttttgcttcatcgtctttccgttctctcccaccatcaattcattgactaacttctcgacgtcatctctcttcacatttgtatcgatttcgagtccaat |
24103199 |
T |
|
Q |
220 |
ctcccattcat |
230 |
Q |
|
|
||||||||||| |
|
|
T |
24103200 |
ctcccattcat |
24103210 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #3
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 6 - 108
Target Start/End: Complemental strand, 28000010 - 27999908
Alignment:
Q |
6 |
atctgcagtttgctggctgatccgcgaaaaatggccaacacaacattggaactccagcacatatactttcagtggttgagttccatccacaatgagtcaa |
105 |
Q |
|
|
|||| ||||||| ||||||||| || ||||||| ||||||||||||||| |||||||| ||||| ||||| ||||||||||||||||| || |||||||| |
|
|
T |
28000010 |
atctacagtttgttggctgatcagcaaaaaatgaccaacacaacattggcactccagcgcatatgctttcggtggttgagttccatccgcagtgagtcaa |
27999911 |
T |
|
Q |
106 |
gaa |
108 |
Q |
|
|
||| |
|
|
T |
27999910 |
gaa |
27999908 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #4
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 119 - 231
Target Start/End: Complemental strand, 28000131 - 28000019
Alignment:
Q |
119 |
gccttttgcctcatcttctttcctttctctcccaccatcaattcattgaccaacttctccacctcatctctcttcacattggtgtcaatttccatcccaa |
218 |
Q |
|
|
||||||||||||||||| ||||| ||||||||||||||||||||||||| | |||||||| || ||| |||||||||| | ||||||||||| |||| |
|
|
T |
28000131 |
gccttttgcctcatcttttttccattctctcccaccatcaattcattgataagcttctccaaatcctctatcttcacattcatatcaatttccataccaa |
28000032 |
T |
|
Q |
219 |
tctcccattcatt |
231 |
Q |
|
|
||| ||||||||| |
|
|
T |
28000031 |
tcttccattcatt |
28000019 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0288 (Bit Score: 68; Significance: 2e-30; HSPs: 2)
Name: scaffold0288
Description:
Target: scaffold0288; HSP #1
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 119 - 234
Target Start/End: Complemental strand, 3751 - 3636
Alignment:
Q |
119 |
gccttttgcctcatcttctttcctttctctcccaccatcaattcattgaccaacttctccacctcatctctcttcacattggtgtcaatttccatcccaa |
218 |
Q |
|
|
|||||||||||||||||||||||||||||||||||| ||||||||||||| | |||||||||||||||||||||||||| | || ||||| | |||| |
|
|
T |
3751 |
gccttttgcctcatcttctttcctttctctcccaccgtcaattcattgactagcttctccacctcatctctcttcacatccatatcgatttcaagtccaa |
3652 |
T |
|
Q |
219 |
tctcccattcattgca |
234 |
Q |
|
|
|||||||||| ||||| |
|
|
T |
3651 |
tctcccattcgttgca |
3636 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0288; HSP #2
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 6 - 119
Target Start/End: Complemental strand, 3630 - 3517
Alignment:
Q |
6 |
atctgcagtttgctggctgatccgcgaaaaatggccaacacaacattggaactccagcacatatactttcagtggttgagttccatccacaatgagtcaa |
105 |
Q |
|
|
|||| ||||||| ||||||||| | || ||||||||||| | |||||| |||||||| ||||| |||||||||||||| |||||||||||||||||||| |
|
|
T |
3630 |
atctacagtttgttggctgatcaccaaagaatggccaacaaagcattggtactccagcgcatatgctttcagtggttgaattccatccacaatgagtcaa |
3531 |
T |
|
Q |
106 |
gaatccaccaattg |
119 |
Q |
|
|
|||||||||||||| |
|
|
T |
3530 |
gaatccaccaattg |
3517 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7 (Bit Score: 66; Significance: 3e-29; HSPs: 2)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 122 - 239
Target Start/End: Original strand, 3086523 - 3086640
Alignment:
Q |
122 |
ttttgcctcatcttctttcctttctctcccaccatcaattcattgaccaacttctccacctcatctctcttcacattggtgtcaatttccatcccaatct |
221 |
Q |
|
|
||||||||||||||||||||||| |||||||||||||||||||||| || |||||| ||||| |||||||||||||| || || ||||| || ||||||| |
|
|
T |
3086523 |
ttttgcctcatcttctttcctttatctcccaccatcaattcattgatcagcttctcgacctcctctctcttcacattagtatcgatttcaattccaatct |
3086622 |
T |
|
Q |
222 |
cccattcattgcatatat |
239 |
Q |
|
|
||||| |||||| |||| |
|
|
T |
3086623 |
cccatatattgcagatat |
3086640 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #2
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 33 - 119
Target Start/End: Original strand, 3086668 - 3086754
Alignment:
Q |
33 |
aaaatggccaacacaacattggaactccagcacatatactttcagtggttgagttccatccacaatgagtcaagaatccaccaattg |
119 |
Q |
|
|
|||||||||||||||||||||| ||||||||| || |||||| |||||||||||||||||||||||||||||||||||||||| |
|
|
T |
3086668 |
aaaatggccaacacaacattggcactccagcaagtacgctttcaaccgttgagttccatccacaatgagtcaagaatccaccaattg |
3086754 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0475 (Bit Score: 58; Significance: 2e-24; HSPs: 2)
Name: scaffold0475
Description:
Target: scaffold0475; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 31 - 116
Target Start/End: Complemental strand, 3570 - 3485
Alignment:
Q |
31 |
gaaaaatggccaacacaacattggaactccagcacatatactttcagtggttgagttccatccacaatgagtcaagaatccaccaa |
116 |
Q |
|
|
|||||||||||||| || |||||||||||||| ||| || |||||| ||||||||||||||||||||||||| ||||||||||||| |
|
|
T |
3570 |
gaaaaatggccaacgcagcattggaactccagaacaaatgctttcaatggttgagttccatccacaatgagttaagaatccaccaa |
3485 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0475; HSP #2
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 173 - 231
Target Start/End: Complemental strand, 3662 - 3604
Alignment:
Q |
173 |
ttctccacctcatctctcttcacattggtgtcaatttccatcccaatctcccattcatt |
231 |
Q |
|
|
||||||||||| |||||||||||||||| || ||||| | ||||||||||||||||| |
|
|
T |
3662 |
ttctccacctcctctctcttcacattggaatctatttcacttccaatctcccattcatt |
3604 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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