View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
Legend |
| Query |
| Query hiting target |
| Query hiting target's complemental strand |
| Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: 108_21_11 (Length: 415)
Name: 108_21_11
Description: Pascalseqs
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
[»] 108_21_11 |
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[»] chr1 (41 HSPs) |
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[»] scaffold0020 (1 HSPs) |
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[»] scaffold0022 (1 HSPs) |
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[»] scaffold1528 (1 HSPs) |
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[»] scaffold0123 (1 HSPs) |
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[»] scaffold0044 (2 HSPs) |
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[»] scaffold0024 (1 HSPs) |
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[»] scaffold0003 (2 HSPs) |
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[»] scaffold0085 (1 HSPs) |
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[»] scaffold0050 (1 HSPs) |
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[»] scaffold0223 (1 HSPs) |
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[»] scaffold0103 (1 HSPs) |
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[»] scaffold0053 (1 HSPs) |
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[»] scaffold0004 (1 HSPs) |
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Alignment Details
Target: chr1 (Bit Score: 245; Significance: 1e-136; HSPs: 41)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 245; E-Value: 1e-136
Query Start/End: Original strand, 1 - 415
Target Start/End: Complemental strand, 9630196 - 9629761
Alignment:
Q |
1 |
gttttgtggttcacatgtgcttttgaaaaccgtttcgtcgcgaattccggggcaggctcttagaataatgtctgttcttgaagatctaaggcttgagatt |
100 |
Q |
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|
||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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|
T |
9630196 |
gttttgtggttcacatgtgcttttgaaaaccgtttcgtcacgaattccggggcaggctcttagaataatgtctgttcttgaagatctaaggcttgagatt |
9630097 |
T |
|
Q |
101 |
gttcatgttagagttaatactgctgatgaaaccatgctatacttgttcactattaaggtaacttaatc---------ttttttctgattacacactatga |
191 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||||||||| ||||||||||||| |
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|
T |
9630096 |
gttcatgttagagttaatactgctgatgaaaccatgctatacttgtttactattaaggtaacttaatctttgtgtatttttttctggttacacactatga |
9629997 |
T |
|
Q |
192 |
agcacggagacggccacgacacagacaccgacacattgacaccgctaataatttgataaaatcatataattcagtgtgattata------ggtgtcgtgt |
285 |
Q |
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|||||||| |||||||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| |
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T |
9629996 |
agcacggatacggccacgacatggacaccgacacatcgacaccgctaataatttgataaaatcatataattcagtgtgattataagtgtcggtgtcgtgt |
9629897 |
T |
|
Q |
286 |
---------------cacgtgtccgacaccgggacacgtctcgtccaagaagtgtccgtgctttacaccgttagtgaagnacattactactgccctgtat |
370 |
Q |
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|
||| |||||||||||||||||||||||||||||||||||||||||| |||||| | |||||||| ||||||||| |||||| |
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|
T |
9629896 |
cgatgtcggacacgacacatgtccgacaccgggacacgtctcgtccaagaagtgtccgtgc-ttacacag-tagtgaagtacattacta-----ctgtat |
9629804 |
T |
|
Q |
371 |
agtataaataactaatcaatgacatgccagtacccaaagcatctt |
415 |
Q |
|
|
||||| |||||||||||||||||||| |||||| ||||||||||| |
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|
T |
9629803 |
agtat-aataactaatcaatgacatg-cagtacacaaagcatctt |
9629761 |
T |
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Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #2
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 186 - 282
Target Start/End: Original strand, 36878417 - 36878514
Alignment:
Q |
186 |
ctatgaagcacggagacggccacg-acacagacaccgacacattgacaccgctaataatttgataaaatcatataattcagtgtgattataggtgtcg |
282 |
Q |
|
|
|||||||||||||| |||| |||| ||| |||||| ||||| ||||||||||||||||||| ||||||| |||||||||||| ||||||||||||| |
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|
T |
36878417 |
ctatgaagcacggatacggacacggacatagacactgacacgccgacaccgctaataatttgagaaaatcacataattcagtgtaattataggtgtcg |
36878514 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #3
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 206 - 281
Target Start/End: Complemental strand, 398847 - 398772
Alignment:
Q |
206 |
cacgacacagacaccgacacattgacaccgctaataatttgataaaatcatataattcagtgtgattataggtgtc |
281 |
Q |
|
|
|||||||| ||||| ||||| ||||||||||||||||||| ||||||| |||||||||||| |||||||||||| |
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|
T |
398847 |
cacgacacggacactgacacgccgacaccgctaataatttgaaaaaatcacataattcagtgtaattataggtgtc |
398772 |
T |
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Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #4
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 186 - 335
Target Start/End: Complemental strand, 5898368 - 5898209
Alignment:
Q |
186 |
ctatgaagcacggagacggccacgacacagacaccgacacattgacaccgctaataatttgataaaatcatataattcagtgtgattataggtgtc-gtg |
284 |
Q |
|
|
||||| |||||||| |||| || ||||||||||| || || ||||||||||||||| ||| ||||||| |||||||||||| |||||| | ||| ||| |
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T |
5898368 |
ctatgtagcacggatacggacatgacacagacactgagacgccgacaccgctaataatctgaaaaaatcacataattcagtgtaattatatgcgtcggtg |
5898269 |
T |
|
Q |
285 |
t---------cacgtgtccgacaccgggacacgtctcgtccaagaagtgtccgtgcttta |
335 |
Q |
|
|
| ||||||||| |||||||||||||||| ||| || ||||||||||||||| |
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|
T |
5898268 |
tcagacacgacacgtgtccaacaccgggacacgtctaatccgaggagtgtccgtgcttta |
5898209 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #5
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 186 - 273
Target Start/End: Complemental strand, 14359623 - 14359537
Alignment:
Q |
186 |
ctatgaagcacggagacggccacgacacagacaccgacacattgacaccgctaataatttgataaaatcatataattcagtgtgatta |
273 |
Q |
|
|
|||||||||||||| |||| |||||||||||||| ||||| ||||| ||||||||||||| ||||||| |||||| ||||| |||| |
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|
T |
14359623 |
ctatgaagcacggatacggacacgacacagacacggacacgccgacacagctaataatttga-aaaatcacataatttagtgtaatta |
14359537 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #6
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 206 - 301
Target Start/End: Complemental strand, 20157432 - 20157338
Alignment:
Q |
206 |
cacgacacagacaccgacacattgacaccgctaataatttgataaaatcatataattcagtgtgattataggtgtcgtgtcacgtgtccgacaccg |
301 |
Q |
|
|
|||||||| | ||| ||||||| ||||||||||||||| ||| ||||||| |||||||||||| || ||| |||||| || |||||||||||||| |
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|
T |
20157432 |
cacgacacgggcactgacacatcgacaccgctaataatgtgagaaaatcacataattcagtgtaatcatatgtgtcg-gtgtcgtgtccgacaccg |
20157338 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #7
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 206 - 275
Target Start/End: Complemental strand, 16927267 - 16927198
Alignment:
Q |
206 |
cacgacacagacaccgacacattgacaccgctaataatttgataaaatcatataattcagtgtgattata |
275 |
Q |
|
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|||||||||||||| ||||| | | || ||||||||||||| |||||||||||||||||||| |||||| |
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|
T |
16927267 |
cacgacacagacactgacacgtcggcatagctaataatttgaaaaaatcatataattcagtgtaattata |
16927198 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #8
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 229 - 282
Target Start/End: Original strand, 38503320 - 38503373
Alignment:
Q |
229 |
gacaccgctaataatttgataaaatcatataattcagtgtgattataggtgtcg |
282 |
Q |
|
|
||||||||||||||||||| ||||||||||| |||||||| |||||| |||||| |
|
|
T |
38503320 |
gacaccgctaataatttgagaaaatcatatatttcagtgtaattatatgtgtcg |
38503373 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #9
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 207 - 282
Target Start/End: Complemental strand, 1486790 - 1486715
Alignment:
Q |
207 |
acgacacagacaccgacacattgacaccgctaataatttgataaaatcatataattcagtgtgattataggtgtcg |
282 |
Q |
|
|
||||||| || || ||||| |||||| ||||||||||||| ||||||| |||||||||||| |||||| |||||| |
|
|
T |
1486790 |
acgacacggatactgacacgctgacacagctaataatttgaaaaaatcacataattcagtgtaattataagtgtcg |
1486715 |
T |
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Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #10
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 206 - 281
Target Start/End: Complemental strand, 7918293 - 7918218
Alignment:
Q |
206 |
cacgacacagacaccgacacattgacaccgctaataatttgataaaatcatataattcagtgtgattataggtgtc |
281 |
Q |
|
|
||||||||||||| ||||| ||||| | |||||||||||| ||||||| |||||||||||| |||||| ||||| |
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|
T |
7918293 |
cacgacacagacaatgacacgctgacatcactaataatttgagaaaatcacataattcagtgtaattatatgtgtc |
7918218 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #11
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 207 - 281
Target Start/End: Original strand, 17754289 - 17754363
Alignment:
Q |
207 |
acgacacagacaccgacacattgacaccgctaataatttgataaaatcatataattcagtgtgattataggtgtc |
281 |
Q |
|
|
||||||||||| | |||||| ||||||||||||||||||| ||||| | |||||||||||| | |||| ||||| |
|
|
T |
17754289 |
acgacacagacgctgacacaccgacaccgctaataatttgaaaaaattacataattcagtgtaactatatgtgtc |
17754363 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #12
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 232 - 282
Target Start/End: Original strand, 52903252 - 52903302
Alignment:
Q |
232 |
accgctaataatttgataaaatcatataattcagtgtgattataggtgtcg |
282 |
Q |
|
|
|||| ||||||||| |||||||||||||||||||||| |||||| |||||| |
|
|
T |
52903252 |
accgttaataatttaataaaatcatataattcagtgtaattatatgtgtcg |
52903302 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #13
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 229 - 282
Target Start/End: Original strand, 9828044 - 9828097
Alignment:
Q |
229 |
gacaccgctaataatttgataaaatcatataattcagtgtgattataggtgtcg |
282 |
Q |
|
|
|||||| |||||||||||||||||||| |||||||||||| ||| || |||||| |
|
|
T |
9828044 |
gacaccactaataatttgataaaatcacataattcagtgtaattttatgtgtcg |
9828097 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #14
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 206 - 275
Target Start/End: Original strand, 34298413 - 34298482
Alignment:
Q |
206 |
cacgacacagacaccgacacattgacaccgctaataatttgataaaatcatataattcagtgtgattata |
275 |
Q |
|
|
|||||||| || || |||||| |||||| |||||||||||| ||||||| |||||||||||| |||||| |
|
|
T |
34298413 |
cacgacacggaaactgacacaccgacaccactaataatttgagaaaatcacataattcagtgtaattata |
34298482 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #15
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 183 - 282
Target Start/End: Complemental strand, 24577292 - 24577192
Alignment:
Q |
183 |
acactatgaagcacggagacggccacgacaca-gacaccgacacattgacaccgctaataatttgataaaatcatataattcagtgtgattataggtgtc |
281 |
Q |
|
|
||||||||||||||||| |||| ||| ||| ||||| ||||| |||||| |||||||||||| ||||||| |||||||||||| |||| | ||||| |
|
|
T |
24577292 |
acactatgaagcacggatacggacactgaacacgacacggacacgctgacacaactaataatttgaaaaaatcacataattcagtgtaattacaagtgtc |
24577193 |
T |
|
Q |
282 |
g |
282 |
Q |
|
|
| |
|
|
T |
24577192 |
g |
24577192 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 186 - 282
Target Start/End: Complemental strand, 28273190 - 28273094
Alignment:
Q |
186 |
ctatgaagcacggagacggccacgacacagacaccgacacattgacaccgctaataatttgataaaatcatataattcagtgtgattataggtgtcg |
282 |
Q |
|
|
|||||||||||||| |||| || |||| ||||| |||| |||||| ||||| |||||| |||||||||||||||||||| |||| | |||||| |
|
|
T |
28273190 |
ctatgaagcacggatacggacatgacaaggacactgacatgctgacacaactaatcatttgaaaaaatcatataattcagtgtaattacaagtgtcg |
28273094 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #17
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 229 - 308
Target Start/End: Original strand, 113299 - 113382
Alignment:
Q |
229 |
gacaccgctaataatttgataaaatcatataattcagtgtgatta------taggtgtcgtgtcacgtgtccgacaccgggacacg |
308 |
Q |
|
|
||||| ||||||||||||| ||||||| |||||||||||| |||| |||||||||||| ||||||| ||||||||||||| |
|
|
T |
113299 |
gacacagctaataatttgaaaaaatcacataattcagtgtaattacaagtgtaggtgtcgtgt--cgtgtccaacaccgggacacg |
113382 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #18
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 229 - 268
Target Start/End: Complemental strand, 2896180 - 2896141
Alignment:
Q |
229 |
gacaccgctaataatttgataaaatcatataattcagtgt |
268 |
Q |
|
|
||||||||||||||||||| ||||||| |||||||||||| |
|
|
T |
2896180 |
gacaccgctaataatttgagaaaatcacataattcagtgt |
2896141 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #19
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 286 - 333
Target Start/End: Original strand, 9828122 - 9828169
Alignment:
Q |
286 |
cacgtgtccgacaccgggacacgtctcgtccaagaagtgtccgtgctt |
333 |
Q |
|
|
|||||||||||||||||||||||||| ||| || ||||||||||||| |
|
|
T |
9828122 |
cacgtgtccgacaccgggacacgtctaatccgaggagtgtccgtgctt |
9828169 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #20
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 224 - 267
Target Start/End: Complemental strand, 11605999 - 11605956
Alignment:
Q |
224 |
acattgacaccgctaataatttgataaaatcatataattcagtg |
267 |
Q |
|
|
|||| |||| |||||||||||||| ||||||||||||||||||| |
|
|
T |
11605999 |
acatcgacatcgctaataatttgaaaaaatcatataattcagtg |
11605956 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #21
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 229 - 280
Target Start/End: Complemental strand, 17425152 - 17425101
Alignment:
Q |
229 |
gacaccgctaataatttgataaaatcatataattcagtgtgattataggtgt |
280 |
Q |
|
|
||||||| ||||||||||||||||||| |||||||| ||| |||||| |||| |
|
|
T |
17425152 |
gacaccgataataatttgataaaatcacataattcaatgtaattatatgtgt |
17425101 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #22
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 207 - 286
Target Start/End: Complemental strand, 22794159 - 22794080
Alignment:
Q |
207 |
acgacacagacaccgacacattgacaccgctaataatttgataaaatcatataattcagtgtgattataggtgtcgtgtc |
286 |
Q |
|
|
|||||| |||||| ||||| | |||| | ||||||||||| ||||| | ||||| |||||| ||||||||||||||||| |
|
|
T |
22794159 |
acgacatagacactgacacgtcaacacggataataatttgaaaaaatgacataatacagtgtaattataggtgtcgtgtc |
22794080 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #23
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 229 - 280
Target Start/End: Complemental strand, 25098614 - 25098563
Alignment:
Q |
229 |
gacaccgctaataatttgataaaatcatataattcagtgtgattataggtgt |
280 |
Q |
|
|
||||||||| ||||||||| ||||||| |||||||||||| |||||| |||| |
|
|
T |
25098614 |
gacaccgctgataatttgagaaaatcacataattcagtgtaattatatgtgt |
25098563 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #24
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 186 - 273
Target Start/End: Complemental strand, 27471668 - 27471581
Alignment:
Q |
186 |
ctatgaagcacggagacggccacgacacagacaccgacacattgacaccgctaataatttgataaaatcatataattcagtgtgatta |
273 |
Q |
|
|
||||||||||| | |||| | ||||||| |||| |||||| || |||||||||||||||| |||| || |||||||||||| |||| |
|
|
T |
27471668 |
ctatgaagcacatatacggacgcgacacaaacactgacacaccgataccgctaataatttgagaaaagcacataattcagtgtaatta |
27471581 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #25
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 230 - 280
Target Start/End: Original strand, 6427351 - 6427401
Alignment:
Q |
230 |
acaccgctaataatttgataaaatcatataattcagtgtgattataggtgt |
280 |
Q |
|
|
|||||||||||||||||| ||||||| |||||||| ||| |||||| |||| |
|
|
T |
6427351 |
acaccgctaataatttgagaaaatcacataattcaatgtaattatatgtgt |
6427401 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #26
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 229 - 283
Target Start/End: Complemental strand, 17831590 - 17831536
Alignment:
Q |
229 |
gacaccgctaataatttgataaaatcatataattcagtgtgattataggtgtcgt |
283 |
Q |
|
|
||||||||||||||||||| ||||||| || ||||||||| || ||| ||||||| |
|
|
T |
17831590 |
gacaccgctaataatttgagaaaatcacattattcagtgtaatcatatgtgtcgt |
17831536 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #27
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 228 - 262
Target Start/End: Original strand, 22781441 - 22781475
Alignment:
Q |
228 |
tgacaccgctaataatttgataaaatcatataatt |
262 |
Q |
|
|
|||||||||||||||||| |||||||||||||||| |
|
|
T |
22781441 |
tgacaccgctaataattttataaaatcatataatt |
22781475 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #28
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 228 - 282
Target Start/End: Original strand, 34371713 - 34371766
Alignment:
Q |
228 |
tgacaccgctaataatttgataaaatcatataattcagtgtgattataggtgtcg |
282 |
Q |
|
|
||||||||||||||||| || ||||||| |||||||||||| |||||| |||||| |
|
|
T |
34371713 |
tgacaccgctaataatt-gagaaaatcacataattcagtgtaattatatgtgtcg |
34371766 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #29
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 229 - 275
Target Start/End: Original strand, 40181871 - 40181917
Alignment:
Q |
229 |
gacaccgctaataatttgataaaatcatataattcagtgtgattata |
275 |
Q |
|
|
||||| ||||||||||||| ||||||| |||||||||||| |||||| |
|
|
T |
40181871 |
gacactgctaataatttgagaaaatcacataattcagtgtaattata |
40181917 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 237 - 282
Target Start/End: Complemental strand, 1864931 - 1864886
Alignment:
Q |
237 |
taataatttgataaaatcatataattcagtgtgattataggtgtcg |
282 |
Q |
|
|
||||||||||| ||||||| |||||||||||| |||||| |||||| |
|
|
T |
1864931 |
taataatttgagaaaatcacataattcagtgtaattatatgtgtcg |
1864886 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 230 - 267
Target Start/End: Original strand, 2851022 - 2851059
Alignment:
Q |
230 |
acaccgctaataatttgataaaatcatataattcagtg |
267 |
Q |
|
|
|||||||||||||||||||||||| | ||||||||||| |
|
|
T |
2851022 |
acaccgctaataatttgataaaattacataattcagtg |
2851059 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 229 - 286
Target Start/End: Complemental strand, 12443519 - 12443462
Alignment:
Q |
229 |
gacaccgctaataatttgataaaatcatataattcagtgtgattataggtgtcgtgtc |
286 |
Q |
|
|
||||| ||||||||||||| ||||||| |||||||||||| ||| || ||| |||||| |
|
|
T |
12443519 |
gacacagctaataatttgagaaaatcacataattcagtgtaattgtatgtgacgtgtc |
12443462 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 233 - 282
Target Start/End: Original strand, 44482234 - 44482283
Alignment:
Q |
233 |
ccgctaataatttgataaaatcatataattcagtgtgattataggtgtcg |
282 |
Q |
|
|
||||| ||||||||| ||||||| |||||||||||| |||||| |||||| |
|
|
T |
44482234 |
ccgcttataatttgagaaaatcacataattcagtgtaattatatgtgtcg |
44482283 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 229 - 282
Target Start/End: Complemental strand, 46348442 - 46348389
Alignment:
Q |
229 |
gacaccgctaataatttgataaaatcatataattcagtgtgattataggtgtcg |
282 |
Q |
|
|
||||| ||||||||||||| |||||||||||||| ||||| |||| | |||||| |
|
|
T |
46348442 |
gacacagctaataatttgaaaaaatcatataatttagtgtaattacaagtgtcg |
46348389 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 227 - 275
Target Start/End: Complemental strand, 48148099 - 48148050
Alignment:
Q |
227 |
ttgacaccgctaataatttgataaaa-tcatataattcagtgtgattata |
275 |
Q |
|
|
||||||||||||||||||| | |||| |||||||||||||||| |||||| |
|
|
T |
48148099 |
ttgacaccgctaataattttaaaaaaatcatataattcagtgtaattata |
48148050 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #36
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 206 - 262
Target Start/End: Complemental strand, 5927422 - 5927366
Alignment:
Q |
206 |
cacgacacagacaccgacacattgacaccgctaataatttgataaaatcatataatt |
262 |
Q |
|
|
|||||||| ||||| ||||| | |||| ||||||||||||| |||||||||||||| |
|
|
T |
5927422 |
cacgacacggacactgacacgctaacactgctaataatttgaaaaaatcatataatt |
5927366 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #37
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 230 - 282
Target Start/End: Original strand, 9709821 - 9709873
Alignment:
Q |
230 |
acaccgctaataatttgataaaatcatataattcagtgtgattataggtgtcg |
282 |
Q |
|
|
|||||||||||||||||| ||||||| ||||||| ||| |||||| |||||| |
|
|
T |
9709821 |
acaccgctaataatttgagaaaatcacataattcgttgtaattatatgtgtcg |
9709873 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #38
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 230 - 282
Target Start/End: Complemental strand, 24176425 - 24176373
Alignment:
Q |
230 |
acaccgctaataatttgataaaatcatataattcagtgtgattataggtgtcg |
282 |
Q |
|
|
|||||| ||||||||||| ||||| | || ||||||||| ||||||||||||| |
|
|
T |
24176425 |
acaccgataataatttgagaaaataacatcattcagtgtaattataggtgtcg |
24176373 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #39
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 229 - 281
Target Start/End: Original strand, 25361886 - 25361938
Alignment:
Q |
229 |
gacaccgctaataatttgataaaatcatataattcagtgtgattataggtgtc |
281 |
Q |
|
|
|||||| || ||||||||| ||||||| |||||||||||| |||||| ||||| |
|
|
T |
25361886 |
gacaccactgataatttgagaaaatcacataattcagtgtaattatatgtgtc |
25361938 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #40
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 230 - 282
Target Start/End: Original strand, 31015044 - 31015096
Alignment:
Q |
230 |
acaccgctaataatttgataaaatcatataattcagtgtgattataggtgtcg |
282 |
Q |
|
|
|||| ||||||||||||| ||||||| |||||||||||| |||| | |||||| |
|
|
T |
31015044 |
acacagctaataatttgagaaaatcacataattcagtgtaattacaagtgtcg |
31015096 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #41
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 186 - 282
Target Start/End: Complemental strand, 48450689 - 48450593
Alignment:
Q |
186 |
ctatgaagcacggagacggccacgacacagacaccgacacattgacaccgctaataatttgataaaatcatataattcagtgtgattataggtgtcg |
282 |
Q |
|
|
|||||||||| ||| |||| |||||||| ||||| ||||| |||| ||||||||||||| ||||| | |||||| ||||| |||| | |||||| |
|
|
T |
48450689 |
ctatgaagcatggatacggacacgacacggacactgacacgccaacacagctaataatttgaaaaaataacataatttagtgtaattacaagtgtcg |
48450593 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6 (Bit Score: 54; Significance: 7e-22; HSPs: 45)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 224 - 333
Target Start/End: Complemental strand, 9025558 - 9025450
Alignment:
Q |
224 |
acattgacaccgctaataatttgataaaatcatataattcagtgtgattataggtgtcgtgtcacgtgtccgacaccgggacacgtctcgtccaagaagt |
323 |
Q |
|
|
|||| ||||| ||||||||||||| ||||||| |||||||||||| |||||| |||||| || ||||||||||||||||||||| || ||| |||||| |
|
|
T |
9025558 |
acatggacactgctaataatttgagaaaatcacataattcagtgtaattatatgtgtcg-gtgtcgtgtccgacaccgggacacgcctaatccgagaagt |
9025460 |
T |
|
Q |
324 |
gtccgtgctt |
333 |
Q |
|
|
|||||||||| |
|
|
T |
9025459 |
gtccgtgctt |
9025450 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #2
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 209 - 280
Target Start/End: Complemental strand, 10889053 - 10888982
Alignment:
Q |
209 |
gacacagacaccgacacattgacaccgctaataatttgataaaatcatataattcagtgtgattataggtgt |
280 |
Q |
|
|
||||| ||||||||||||| ||||||||||||||||||||||||||| |||||| |||||||||||| |||| |
|
|
T |
10889053 |
gacacggacaccgacacatagacaccgctaataatttgataaaatcacataatttagtgtgattatatgtgt |
10888982 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #3
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 206 - 325
Target Start/End: Original strand, 9027155 - 9027273
Alignment:
Q |
206 |
cacgacacagacaccgacacattgacaccgctaataatttgataaaatcatataattcagtgtgattataggtgtcgtgtcacgtgtccgacaccgggac |
305 |
Q |
|
|
|||||||| ||||| ||||| ||||||||||||||||||| | ||||| ||||||| |||| |||||| |||||| || |||||||||||||||||| |
|
|
T |
9027155 |
cacgacacggacactgacacgccgacaccgctaataatttgagataatcacataattccgtgtaattatatgtgtcg-gtgtcgtgtccgacaccgggac |
9027253 |
T |
|
Q |
306 |
acgtctcgtccaagaagtgt |
325 |
Q |
|
|
||| || |||||| ||||| |
|
|
T |
9027254 |
acggctaatccaaggagtgt |
9027273 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #4
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 186 - 286
Target Start/End: Original strand, 2117034 - 2117133
Alignment:
Q |
186 |
ctatgaagcacggagacggccacgacacagacaccgacacattgacaccgctaataatttgataaaatcatataattcagtgtgattataggtgtcgtgt |
285 |
Q |
|
|
||||||||||||||||||| |||||||| || || ||||| |||||| |||||||||||| ||||||| |||||||| || |||||| ||||||||| |
|
|
T |
2117034 |
ctatgaagcacggagacggacacgacac-gatacggacactccgacacctctaataatttgaaaaaatcacataattcaatgcaattataagtgtcgtgt |
2117132 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #5
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 206 - 282
Target Start/End: Original strand, 7086772 - 7086848
Alignment:
Q |
206 |
cacgacacagacaccgacacattgacaccgctaataatttgataaaatcatataattcagtgtgattataggtgtcg |
282 |
Q |
|
|
|||||||||||||||||||| | | ||| ||||||||||||| ||||||| |||||| ||||| |||||| |||||| |
|
|
T |
7086772 |
cacgacacagacaccgacacgtcggcactgctaataatttgagaaaatcacataatttagtgtaattatatgtgtcg |
7086848 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #6
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 229 - 333
Target Start/End: Original strand, 7938116 - 7938214
Alignment:
Q |
229 |
gacaccgctaataatttgataaaatcatataattcagtgtgattataggtgtcgtgtcacgtgtccgacaccgggacacgtctcgtccaagaagtgtccg |
328 |
Q |
|
|
||||| ||||||||||||| |||||||||||||| ||||| |||||| |||||| ||||||||||||| |||||| || ||| || |||||||| |
|
|
T |
7938116 |
gacacagctaataatttgaaaaaatcatataatttagtgtaattataagtgtcg------gtgtccgacaccgagacacgcctgatccgaggagtgtccg |
7938209 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #7
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 209 - 282
Target Start/End: Complemental strand, 30866223 - 30866150
Alignment:
Q |
209 |
gacacagacaccgacacattgacaccgctaataatttgataaaatcatataattcagtgtgattataggtgtcg |
282 |
Q |
|
|
||||| |||||||||||| |||||||||||||||||| ||||||| |||||||| ||| |||||| |||||| |
|
|
T |
30866223 |
gacactgacaccgacacaccaacaccgctaataatttgagaaaatcacataattcaatgtaattatatgtgtcg |
30866150 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #8
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 230 - 282
Target Start/End: Complemental strand, 7265651 - 7265599
Alignment:
Q |
230 |
acaccgctaataatttgataaaatcatataattcagtgtgattataggtgtcg |
282 |
Q |
|
|
|||||||||||||||||| ||||||| |||||||||||| |||||| |||||| |
|
|
T |
7265651 |
acaccgctaataatttgagaaaatcacataattcagtgtaattatatgtgtcg |
7265599 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #9
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 206 - 274
Target Start/End: Complemental strand, 8805654 - 8805586
Alignment:
Q |
206 |
cacgacacagacaccgacacattgacaccgctaataatttgataaaatcatataattcagtgtgattat |
274 |
Q |
|
|
|||||||||||||||||||| | | ||| ||||||||||||| ||||||| |||||| ||||| ||||| |
|
|
T |
8805654 |
cacgacacagacaccgacacgtcggcactgctaataatttgagaaaatcacataatttagtgtaattat |
8805586 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #10
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 206 - 282
Target Start/End: Original strand, 13851713 - 13851789
Alignment:
Q |
206 |
cacgacacagacaccgacacattgacaccgctaataatttgataaaatcatataattcagtgtgattataggtgtcg |
282 |
Q |
|
|
|||||||| ||||| ||||| | ||||||||||||||||||| ||||| | ||||||||||| |||||| |||||| |
|
|
T |
13851713 |
cacgacacggacactgacacgtcgacaccgctaataatttgagaaaataacgtaattcagtgtaattatatgtgtcg |
13851789 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #11
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 229 - 281
Target Start/End: Complemental strand, 17341723 - 17341671
Alignment:
Q |
229 |
gacaccgctaataatttgataaaatcatataattcagtgtgattataggtgtc |
281 |
Q |
|
|
||||||| ||||||||||||||||||| |||||||||||| |||||| ||||| |
|
|
T |
17341723 |
gacaccgttaataatttgataaaatcacataattcagtgtaattataagtgtc |
17341671 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #12
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 229 - 281
Target Start/End: Original strand, 19040352 - 19040404
Alignment:
Q |
229 |
gacaccgctaataatttgataaaatcatataattcagtgtgattataggtgtc |
281 |
Q |
|
|
||||||||||||||||||| ||||||| |||||||||||| |||||| ||||| |
|
|
T |
19040352 |
gacaccgctaataatttgagaaaatcacataattcagtgtaattatatgtgtc |
19040404 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #13
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 206 - 277
Target Start/End: Original strand, 7625099 - 7625170
Alignment:
Q |
206 |
cacgacacagacaccgacacattgacaccgctaataatttgataaaatcatataattcagtgtgattatagg |
277 |
Q |
|
|
|||||||||||||||||||| | ||||| | ||||||||||| ||||| |||||||| ||| | |||||||| |
|
|
T |
7625099 |
cacgacacagacaccgacacgtcgacacggataataatttgagaaaatgatataatttagtataattatagg |
7625170 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #14
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 229 - 333
Target Start/End: Complemental strand, 7996437 - 7996327
Alignment:
Q |
229 |
gacaccgctaataatttgataaaatcatataattcagtgtgattata------ggtgtcgtgtcacgtgtccgacaccgggacacgtctcgtccaagaag |
322 |
Q |
|
|
||||| ||||||||||||| |||||||||||||||||||| |||||| ||||||| | |||||||| |||| |||||||| || |||||| || |
|
|
T |
7996437 |
gacactgctaataatttgagaaaatcatataattcagtgtaattatatgcgtcggtgtcgcgacacgtgtctaacacggggacacgcctaatccaaggag |
7996338 |
T |
|
Q |
323 |
tgtccgtgctt |
333 |
Q |
|
|
| ||||||||| |
|
|
T |
7996337 |
tctccgtgctt |
7996327 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #15
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 229 - 333
Target Start/End: Original strand, 8022364 - 8022474
Alignment:
Q |
229 |
gacaccgctaataatttgataaaatcatataattcagtgtgattata------ggtgtcgtgtcacgtgtccgacaccgggacacgtctcgtccaagaag |
322 |
Q |
|
|
||||| ||||||||||||| |||||||||||||||||||| |||||| ||||||| | |||||||| |||| |||||||| || |||||| || |
|
|
T |
8022364 |
gacactgctaataatttgagaaaatcatataattcagtgtaattatatgcgtcggtgtcgcgacacgtgtctaacacggggacacgcctaatccaaggag |
8022463 |
T |
|
Q |
323 |
tgtccgtgctt |
333 |
Q |
|
|
| ||||||||| |
|
|
T |
8022464 |
tctccgtgctt |
8022474 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #16
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 185 - 280
Target Start/End: Complemental strand, 32511769 - 32511674
Alignment:
Q |
185 |
actatgaagcacggagacggccacgacacagacaccgacacattgacaccgctaataatttgataaaatcatataattcagtgtgattataggtgt |
280 |
Q |
|
|
||||||||||||||| || | || |||||||||| | | | |||||||||||||||||| | ||||||| |||||||||||| |||||| |||| |
|
|
T |
32511769 |
actatgaagcacggataccgacatgacacagacattgcccctctgacaccgctaataatttaagaaaatcacataattcagtgtaattataagtgt |
32511674 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #17
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 188 - 282
Target Start/End: Original strand, 16833267 - 16833361
Alignment:
Q |
188 |
atgaagcacggagacggccacgacacagacaccgacacattgacaccgctaataatttgataaaatcatataattcagtgtgattataggtgtcg |
282 |
Q |
|
|
||||||||| || |||| |||||||||||||| ||||| ||||| |||||||||||| ||||||| ||| |||||||| |||| | |||||| |
|
|
T |
16833267 |
atgaagcactgatacggacacgacacagacactgacacgccgacacaactaataatttgaaaaaatcacatacttcagtgtaattacaagtgtcg |
16833361 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #18
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 230 - 275
Target Start/End: Original strand, 1532241 - 1532286
Alignment:
Q |
230 |
acaccgctaataatttgataaaatcatataattcagtgtgattata |
275 |
Q |
|
|
|||||||||||||||||||||||| | |||||||||||| |||||| |
|
|
T |
1532241 |
acaccgctaataatttgataaaattacataattcagtgtaattata |
1532286 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #19
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 206 - 275
Target Start/End: Original strand, 3398596 - 3398664
Alignment:
Q |
206 |
cacgacacagacaccgacacattgacaccgctaataatttgataaaatcatataattcagtgtgattata |
275 |
Q |
|
|
|||||||| ||||| ||||| ||||| ||||||||||||| |||||||||||||||||||| |||||| |
|
|
T |
3398596 |
cacgacacggacactgacacgccgacacagctaataatttga-aaaatcatataattcagtgtaattata |
3398664 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #20
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 206 - 275
Target Start/End: Original strand, 9658856 - 9658925
Alignment:
Q |
206 |
cacgacacagacaccgacacattgacaccgctaataatttgataaaatcatataattcagtgtgattata |
275 |
Q |
|
|
|||||||| ||||| ||||| ||||||||||||||||| | ||||||| |||||||||||| |||||| |
|
|
T |
9658856 |
cacgacacggacactgacacgccgacaccgctaataatttaagaaaatcacataattcagtgtaattata |
9658925 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #21
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 229 - 282
Target Start/End: Complemental strand, 20371169 - 20371116
Alignment:
Q |
229 |
gacaccgctaataatttgataaaatcatataattcagtgtgattataggtgtcg |
282 |
Q |
|
|
||||||||||||||||||| ||||||| |||| ||| |||||||||| |||||| |
|
|
T |
20371169 |
gacaccgctaataatttgagaaaatcacataactcaatgtgattatatgtgtcg |
20371116 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 186 - 282
Target Start/End: Complemental strand, 10770776 - 10770680
Alignment:
Q |
186 |
ctatgaagcacggagacggccacgacacagacaccgacacattgacaccgctaataatttgataaaatcatataattcagtgtgattataggtgtcg |
282 |
Q |
|
|
|||||||||||||| |||| ||||||| ||||| ||||| |||| |||||||||||| ||||||| |||||||||||| |||| | |||||| |
|
|
T |
10770776 |
ctatgaagcacggatacggacacgacatggacactgacacgccaacacaactaataatttgaaaaaatcacataattcagtgtaattacaagtgtcg |
10770680 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 186 - 282
Target Start/End: Original strand, 19147799 - 19147895
Alignment:
Q |
186 |
ctatgaagcacggagacggccacgacacagacaccgacacattgacaccgctaataatttgataaaatcatataattcagtgtgattataggtgtcg |
282 |
Q |
|
|
|||||||||||||| | | ||||||||||||| |||||| ||||||| ||||||||| | ||||||||||| |||| || |||||| |||||| |
|
|
T |
19147799 |
ctatgaagcacggatgcagacacgacacagacagtgacacaaagacaccgttaataatttaagaaaatcatatagatcagagtaattatatgtgtcg |
19147895 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 234 - 286
Target Start/End: Original strand, 24832593 - 24832645
Alignment:
Q |
234 |
cgctaataatttgataaaatcatataattcagtgtgattataggtgtcgtgtc |
286 |
Q |
|
|
|||||||||||||| |||||| ||||||| ||||| |||||| |||||||||| |
|
|
T |
24832593 |
cgctaataatttgagaaaatcttataatttagtgtaattatatgtgtcgtgtc |
24832645 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #25
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 235 - 333
Target Start/End: Original strand, 31959165 - 31959264
Alignment:
Q |
235 |
gctaataatttgataaaatcatataattcagtgtgattataggtgtc-gtgtcacgtgtccgacaccgggacacgtctcgtccaagaagtgtccgtgctt |
333 |
Q |
|
|
||||||||||||| ||||||| ||||| |||||| |||| | ||||| | | || ||||||||||||||||||| || ||| || ||||||||||||| |
|
|
T |
31959165 |
gctaataatttgaaaaaatcacataatgcagtgtaattacaagtgtcggcgacatgtgtccgacaccgggacacacctaatccgaggagtgtccgtgctt |
31959264 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #26
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 228 - 275
Target Start/End: Complemental strand, 32320729 - 32320682
Alignment:
Q |
228 |
tgacaccgctaataatttgataaaatcatataattcagtgtgattata |
275 |
Q |
|
|
|||||||| ||||||||||||||||||| |||||||| ||| |||||| |
|
|
T |
32320729 |
tgacaccgttaataatttgataaaatcacataattcaatgtcattata |
32320682 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #27
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 290 - 333
Target Start/End: Complemental strand, 32978887 - 32978844
Alignment:
Q |
290 |
tgtccgacaccgggacacgtctcgtccaagaagtgtccgtgctt |
333 |
Q |
|
|
|||||||||||||||||||||| |||||| ||||||||||||| |
|
|
T |
32978887 |
tgtccgacaccgggacacgtctaatccaaggagtgtccgtgctt |
32978844 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #28
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 215 - 286
Target Start/End: Original strand, 34446551 - 34446622
Alignment:
Q |
215 |
gacaccgacacattgacaccgctaataatttgataaaatcatataattcagtgtgattataggtgtcgtgtc |
286 |
Q |
|
|
||||| ||||| |||||| | ||||||||||| ||||| | |||||||||||| || |||||||||||||| |
|
|
T |
34446551 |
gacacagacactctgacacggataataatttgagaaaatgacataattcagtgtaatcataggtgtcgtgtc |
34446622 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #29
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 215 - 265
Target Start/End: Complemental strand, 7723323 - 7723273
Alignment:
Q |
215 |
gacaccgacacattgacaccgctaataatttgataaaatcatataattcag |
265 |
Q |
|
|
||||| ||||| | ||||| ||||||||||||| ||||||||||||||||| |
|
|
T |
7723323 |
gacactgacacgtggacactgctaataatttgagaaaatcatataattcag |
7723273 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #30
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 195 - 273
Target Start/End: Original strand, 12696290 - 12696368
Alignment:
Q |
195 |
acggagacggccacgacacagacaccgacacattgacaccgctaataatttgataaaatcatataattcagtgtgatta |
273 |
Q |
|
|
||||| |||| |||||||| ||||| ||||| ||||| ||||||||||||| ||||| | |||||||||||| |||| |
|
|
T |
12696290 |
acggacacggacacgacacggacactgacacgccgacacagctaataatttgaaaaaattacataattcagtgtaatta |
12696368 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #31
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 230 - 280
Target Start/End: Complemental strand, 13689550 - 13689500
Alignment:
Q |
230 |
acaccgctaataatttgataaaatcatataattcagtgtgattataggtgt |
280 |
Q |
|
|
|||||||||||||||||||||||||||| |||| |||| |||||| |||| |
|
|
T |
13689550 |
acaccgctaataatttgataaaatcatacaatttcgtgtaattatacgtgt |
13689500 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #32
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 207 - 273
Target Start/End: Complemental strand, 25038152 - 25038086
Alignment:
Q |
207 |
acgacacagacaccgacacattgacaccgctaataatttgataaaatcatataattcagtgtgatta |
273 |
Q |
|
|
|||||||||| || ||||| ||||||||| ||||||||||| ||||| | |||||| ||||| |||| |
|
|
T |
25038152 |
acgacacagatactgacacgttgacaccgttaataatttgagaaaattacataatttagtgtaatta |
25038086 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #33
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 230 - 268
Target Start/End: Complemental strand, 34447416 - 34447378
Alignment:
Q |
230 |
acaccgctaataatttgataaaatcatataattcagtgt |
268 |
Q |
|
|
|||||| |||||||||||||||||||||||||| ||||| |
|
|
T |
34447416 |
acaccgttaataatttgataaaatcatataatttagtgt |
34447378 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 237 - 286
Target Start/End: Original strand, 6389751 - 6389800
Alignment:
Q |
237 |
taataatttgataaaatcatataattcagtgtgattataggtgtcgtgtc |
286 |
Q |
|
|
||||||||||| ||||| |||||||| ||||| || |||||||||||||| |
|
|
T |
6389751 |
taataatttgagaaaatgatataatttagtgtaatcataggtgtcgtgtc |
6389800 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 229 - 282
Target Start/End: Original strand, 7377979 - 7378032
Alignment:
Q |
229 |
gacaccgctaataatttgataaaatcatataattcagtgtgattataggtgtcg |
282 |
Q |
|
|
||||||||||| ||||||| ||||||| |||||||| ||| |||||| |||||| |
|
|
T |
7377979 |
gacaccgctaaaaatttgagaaaatcacataattcaatgtaattatatgtgtcg |
7378032 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 229 - 282
Target Start/End: Original strand, 10842532 - 10842585
Alignment:
Q |
229 |
gacaccgctaataatttgataaaatcatataattcagtgtgattataggtgtcg |
282 |
Q |
|
|
||||||||||||||||||| ||||||| |||||| ||||| || ||| |||||| |
|
|
T |
10842532 |
gacaccgctaataatttgaaaaaatcacataatttagtgtaatcatatgtgtcg |
10842585 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 229 - 282
Target Start/End: Complemental strand, 13364764 - 13364711
Alignment:
Q |
229 |
gacaccgctaataatttgataaaatcatataattcagtgtgattataggtgtcg |
282 |
Q |
|
|
||||| ||| ||||||||| |||||||||||||||||||| || ||| |||||| |
|
|
T |
13364764 |
gacactgcttataatttgagaaaatcatataattcagtgtaatcatatgtgtcg |
13364711 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 229 - 282
Target Start/End: Original strand, 16766697 - 16766750
Alignment:
Q |
229 |
gacaccgctaataatttgataaaatcatataattcagtgtgattataggtgtcg |
282 |
Q |
|
|
||||| ||||||||||||| ||||||| |||||||||||| |||| | |||||| |
|
|
T |
16766697 |
gacacagctaataatttgaaaaaatcacataattcagtgtaattacaagtgtcg |
16766750 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 237 - 286
Target Start/End: Complemental strand, 17168514 - 17168465
Alignment:
Q |
237 |
taataatttgataaaatcatataattcagtgtgattataggtgtcgtgtc |
286 |
Q |
|
|
||||||||||| ||||| |||||||| ||||| || |||||||||||||| |
|
|
T |
17168514 |
taataatttgagaaaatgatataatttagtgtaataataggtgtcgtgtc |
17168465 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 229 - 282
Target Start/End: Complemental strand, 21924994 - 21924941
Alignment:
Q |
229 |
gacaccgctaataatttgataaaatcatataattcagtgtgattataggtgtcg |
282 |
Q |
|
|
||||| ||||||||||||| || |||| |||||||||||| |||||| |||||| |
|
|
T |
21924994 |
gacactgctaataatttgagaatatcaaataattcagtgtaattatatgtgtcg |
21924941 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 229 - 282
Target Start/End: Original strand, 26562689 - 26562742
Alignment:
Q |
229 |
gacaccgctaataatttgataaaatcatataattcagtgtgattataggtgtcg |
282 |
Q |
|
|
||||| ||||| ||||||| ||||||| |||||||||||| |||||| |||||| |
|
|
T |
26562689 |
gacactgctaaaaatttgagaaaatcacataattcagtgtaattatatgtgtcg |
26562742 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 186 - 282
Target Start/End: Original strand, 34595090 - 34595187
Alignment:
Q |
186 |
ctatgaagcacggagac-ggccacgacacagacaccgacacattgacaccgctaataatttgataaaatcatataattcagtgtgattataggtgtcg |
282 |
Q |
|
|
|||||||||||||| || || |||||||| |||| ||||| ||||| |||||||||||| ||||||| |||||||||||| |||| | |||||| |
|
|
T |
34595090 |
ctatgaagcacggacaccggacacgacacggacaatgacacgccgacacaactaataatttgaaaaaatcacataattcagtgtaattacaagtgtcg |
34595187 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #43
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 276 - 308
Target Start/End: Original strand, 7930358 - 7930390
Alignment:
Q |
276 |
ggtgtcgtgtcacgtgtccgacaccgggacacg |
308 |
Q |
|
|
||||||||||||||||||||||||| ||||||| |
|
|
T |
7930358 |
ggtgtcgtgtcacgtgtccgacaccaggacacg |
7930390 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #44
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 236 - 276
Target Start/End: Complemental strand, 8389524 - 8389484
Alignment:
Q |
236 |
ctaataatttgataaaatcatataattcagtgtgattatag |
276 |
Q |
|
|
|||||||||| | |||||||||||||||||||| ||||||| |
|
|
T |
8389524 |
ctaataatttaagaaaatcatataattcagtgtaattatag |
8389484 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #45
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 230 - 274
Target Start/End: Complemental strand, 31579283 - 31579239
Alignment:
Q |
230 |
acaccgctaataatttgataaaatcatataattcagtgtgattat |
274 |
Q |
|
|
|||||| ||||||||||| ||||||| |||||||||||| ||||| |
|
|
T |
31579283 |
acaccgttaataatttgagaaaatcacataattcagtgtaattat |
31579239 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7 (Bit Score: 49; Significance: 7e-19; HSPs: 37)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 206 - 282
Target Start/End: Complemental strand, 21141064 - 21140988
Alignment:
Q |
206 |
cacgacacagacaccgacacattgacaccgctaataatttgataaaatcatataattcagtgtgattataggtgtcg |
282 |
Q |
|
|
|||||||| ||| ||||||| | |||||| |||||||||| | |||||||||||||||||||||||||||||||||| |
|
|
T |
21141064 |
cacgacacggacgccgacacgtcgacaccactaataatttaagaaaatcatataattcagtgtgattataggtgtcg |
21140988 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #2
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 187 - 282
Target Start/End: Original strand, 15902780 - 15902875
Alignment:
Q |
187 |
tatgaagcacggagacggccacgacacagacaccgacacattgacaccgctaataatttgataaaatcatataattcagtgtgattataggtgtcg |
282 |
Q |
|
|
||||||||||| | |||| |||||||||||||| |||| |||||| ||||||||||||||||||| |||||| ||||| |||||| |||||| |
|
|
T |
15902780 |
tatgaagcacgaatacggacacgacacagacactgacatgccgacaccaataataatttgataaaatcacataatttagtgtaattatatgtgtcg |
15902875 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #3
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 206 - 275
Target Start/End: Original strand, 5235963 - 5236032
Alignment:
Q |
206 |
cacgacacagacaccgacacattgacaccgctaataatttgataaaatcatataattcagtgtgattata |
275 |
Q |
|
|
|||||||||||||| ||||| | ||||||||||||||||| | ||||| |||||||| ||||| |||||| |
|
|
T |
5235963 |
cacgacacagacactgacacgtcgacaccgctaataatttaagaaaattatataatttagtgtaattata |
5236032 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #4
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 209 - 282
Target Start/End: Original strand, 20549771 - 20549844
Alignment:
Q |
209 |
gacacagacaccgacacattgacaccgctaataatttgataaaatcatataattcagtgtgattataggtgtcg |
282 |
Q |
|
|
|||||| |||| |||||| ||||||||||||||||||| ||||||| ||||||||||| |||||| |||||| |
|
|
T |
20549771 |
gacacatacactgacacaccgacaccgctaataatttgagaaaatcacgtaattcagtgtaattatatgtgtcg |
20549844 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #5
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 206 - 266
Target Start/End: Original strand, 26733281 - 26733341
Alignment:
Q |
206 |
cacgacacagacaccgacacattgacaccgctaataatttgataaaatcatataattcagt |
266 |
Q |
|
|
|||||||| ||||| ||||| | ||||||||||||||||||| ||||||| |||||||||| |
|
|
T |
26733281 |
cacgacacggacactgacacgtcgacaccgctaataatttgacaaaatcacataattcagt |
26733341 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #6
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 218 - 281
Target Start/End: Original strand, 17851420 - 17851483
Alignment:
Q |
218 |
accgacacattgacaccgctaataatttgataaaatcatataattcagtgtgattataggtgtc |
281 |
Q |
|
|
|||||||||| || |||||||||||||| | ||||||| |||||||||||| |||||| ||||| |
|
|
T |
17851420 |
accgacacatcgataccgctaataattttagaaaatcacataattcagtgtaattatatgtgtc |
17851483 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #7
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 215 - 281
Target Start/End: Complemental strand, 42720963 - 42720897
Alignment:
Q |
215 |
gacaccgacacattgacaccgctaataatttgataaaatcatataattcagtgtgattataggtgtc |
281 |
Q |
|
|
||||| ||||| ||||||||||||||||||||| ||||||| |||||| | ||| |||||| ||||| |
|
|
T |
42720963 |
gacactgacacgttgacaccgctaataatttgaaaaaatcacataattaaatgtaattatatgtgtc |
42720897 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #8
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 209 - 282
Target Start/End: Complemental strand, 3520421 - 3520348
Alignment:
Q |
209 |
gacacagacaccgacacattgacaccgctaataatttgataaaatcatataattcagtgtgattataggtgtcg |
282 |
Q |
|
|
|||||||||| ||||| |||||||| |||| |||||| |||||||||||||||| ||| |||||| |||||| |
|
|
T |
3520421 |
gacacagacattgacacgctgacaccgataatcatttgagaaaatcatataattcaatgtaattatatgtgtcg |
3520348 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #9
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 237 - 286
Target Start/End: Original strand, 23751908 - 23751957
Alignment:
Q |
237 |
taataatttgataaaatcatataattcagtgtgattataggtgtcgtgtc |
286 |
Q |
|
|
||||||||||||||||| |||||||| ||||| || |||||||||||||| |
|
|
T |
23751908 |
taataatttgataaaatgatataatttagtgtaatcataggtgtcgtgtc |
23751957 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #10
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 229 - 274
Target Start/End: Complemental strand, 29787428 - 29787383
Alignment:
Q |
229 |
gacaccgctaataatttgataaaatcatataattcagtgtgattat |
274 |
Q |
|
|
||||||||||||||||||| ||||||| |||||||||||| ||||| |
|
|
T |
29787428 |
gacaccgctaataatttgagaaaatcacataattcagtgtaattat |
29787383 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #11
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 229 - 281
Target Start/End: Original strand, 5548676 - 5548728
Alignment:
Q |
229 |
gacaccgctaataatttgataaaatcatataattcagtgtgattataggtgtc |
281 |
Q |
|
|
||||||||| ||||||||| ||||||| |||||||||||| |||||| ||||| |
|
|
T |
5548676 |
gacaccgctgataatttgagaaaatcaaataattcagtgtaattatatgtgtc |
5548728 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #12
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 206 - 282
Target Start/End: Original strand, 19206027 - 19206103
Alignment:
Q |
206 |
cacgacacagacaccgacacattgacaccgctaataatttgataaaatcatataattcagtgtgattataggtgtcg |
282 |
Q |
|
|
|||||||| |||||| |||| ||||||||||||||||||| ||||||| |||||||| | | |||||| |||||| |
|
|
T |
19206027 |
cacgacacggacaccaacacgccgacaccgctaataatttgagaaaatcacataattcattataattatatgtgtcg |
19206103 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #13
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 229 - 281
Target Start/End: Original strand, 32308120 - 32308172
Alignment:
Q |
229 |
gacaccgctaataatttgataaaatcatataattcagtgtgattataggtgtc |
281 |
Q |
|
|
||||||||||||||||||| ||||||| |||||||||||| ||| || ||||| |
|
|
T |
32308120 |
gacaccgctaataatttgagaaaatcacataattcagtgtaattgtatgtgtc |
32308172 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #14
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 206 - 282
Target Start/End: Original strand, 49107798 - 49107873
Alignment:
Q |
206 |
cacgacacagacaccgacacattgacaccgctaataatttgataaaatcatataattcagtgtgattataggtgtcg |
282 |
Q |
|
|
|||||||| ||| | |||||| ||||||||||||||||||| |||| || |||||| |||||||||||| |||||| |
|
|
T |
49107798 |
cacgacacggactctgacacaccgacaccgctaataatttgagaaaa-cacataattgagtgtgattatatgtgtcg |
49107873 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #15
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 286 - 333
Target Start/End: Original strand, 598275 - 598322
Alignment:
Q |
286 |
cacgtgtccgacaccgggacacgtctcgtccaagaagtgtccgtgctt |
333 |
Q |
|
|
||||||||||||||||||||||| || ||| |||||||||||||||| |
|
|
T |
598275 |
cacgtgtccgacaccgggacacgcctaatccgagaagtgtccgtgctt |
598322 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #16
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 286 - 333
Target Start/End: Original strand, 9778572 - 9778619
Alignment:
Q |
286 |
cacgtgtccgacaccgggacacgtctcgtccaagaagtgtccgtgctt |
333 |
Q |
|
|
||||||||||||||||||||||| || |||||| ||||||||||||| |
|
|
T |
9778572 |
cacgtgtccgacaccgggacacgcctaatccaaggagtgtccgtgctt |
9778619 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #17
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 186 - 306
Target Start/End: Original strand, 12289070 - 12289189
Alignment:
Q |
186 |
ctatgaagcacggagacggccacgacacagacaccgacacattgac-accgctaataatttgataaaatcatataattcagtgtgattataggtgtcgtg |
284 |
Q |
|
|
|||||||||||||| || | ||| |||| ||||||||||| | | || ||||||||||||| ||||||| ||||||||||| ||||| |||||||| |
|
|
T |
12289070 |
ctatgaagcacggatacagacacaacacggacaccgacacgccggccactgctaataatttgagaaaatcacataattcagtggaattat--gtgtcgtg |
12289167 |
T |
|
Q |
285 |
tcacgtgtccgacaccgggaca |
306 |
Q |
|
|
||| |||| |||| | |||||| |
|
|
T |
12289168 |
tcatgtgttcgactctgggaca |
12289189 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #18
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 237 - 286
Target Start/End: Original strand, 5938480 - 5938529
Alignment:
Q |
237 |
taataatttgataaaatcatataattcagtgtgattataggtgtcgtgtc |
286 |
Q |
|
|
||||||||||||||||| | |||||||||| | ||||||||||| ||||| |
|
|
T |
5938480 |
taataatttgataaaataacataattcagtataattataggtgttgtgtc |
5938529 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #19
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 220 - 273
Target Start/End: Original strand, 11831423 - 11831476
Alignment:
Q |
220 |
cgacacattgacaccgctaataatttgataaaatcatataattcagtgtgatta |
273 |
Q |
|
|
|||||||| ||||| |||||||||||| |||||||||||||| ||||| |||| |
|
|
T |
11831423 |
cgacacatcgacacaactaataatttgaaaaaatcatataatttagtgtaatta |
11831476 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 237 - 274
Target Start/End: Complemental strand, 11890970 - 11890933
Alignment:
Q |
237 |
taataatttgataaaatcatataattcagtgtgattat |
274 |
Q |
|
|
||||||||||| |||||||||||||||||||| ||||| |
|
|
T |
11890970 |
taataatttgaaaaaatcatataattcagtgtaattat |
11890933 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 236 - 273
Target Start/End: Original strand, 13300417 - 13300454
Alignment:
Q |
236 |
ctaataatttgataaaatcatataattcagtgtgatta |
273 |
Q |
|
|
|||||||||||| |||||||||||||||||||| |||| |
|
|
T |
13300417 |
ctaataatttgaaaaaatcatataattcagtgtaatta |
13300454 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 225 - 274
Target Start/End: Original strand, 14729697 - 14729746
Alignment:
Q |
225 |
cattgacaccgctaataatttgataaaatcatataattcagtgtgattat |
274 |
Q |
|
|
|||||| |||||||||||||||| ||||||| ||||||||||| ||||| |
|
|
T |
14729697 |
cattgaaaccgctaataatttgagaaaatcacgtaattcagtgtaattat |
14729746 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 235 - 308
Target Start/End: Complemental strand, 18215239 - 18215167
Alignment:
Q |
235 |
gctaataatttgataaaatcatataattcagtgtgattataggtgtcgtgtcacgtgtccgacaccgggacacg |
308 |
Q |
|
|
||||||||||||| ||||||| ||||| |||||| ||| | |||||| || ||||||||||||||||||||| |
|
|
T |
18215239 |
gctaataatttgaaaaaatcacataatgcagtgtagttacaagtgtcg-gtgtcgtgtccgacaccgggacacg |
18215167 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 229 - 282
Target Start/End: Original strand, 19992001 - 19992054
Alignment:
Q |
229 |
gacaccgctaataatttgataaaatcatataattcagtgtgattataggtgtcg |
282 |
Q |
|
|
||||| ||||||||||||| ||||||| ||| |||||||| |||||| |||||| |
|
|
T |
19992001 |
gacacagctaataatttgagaaaatcacatatttcagtgtaattataagtgtcg |
19992054 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 229 - 282
Target Start/End: Original strand, 24339642 - 24339695
Alignment:
Q |
229 |
gacaccgctaataatttgataaaatcatataattcagtgtgattataggtgtcg |
282 |
Q |
|
|
||||| ||||||||||||| ||||||| |||||||||||| |||| | |||||| |
|
|
T |
24339642 |
gacacagctaataatttgaaaaaatcacataattcagtgtaattacaagtgtcg |
24339695 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 237 - 286
Target Start/End: Complemental strand, 29812715 - 29812666
Alignment:
Q |
237 |
taataatttgataaaatcatataattcagtgtgattataggtgtcgtgtc |
286 |
Q |
|
|
||||||||||| ||||| |||||||| ||||| || |||||||||||||| |
|
|
T |
29812715 |
taataatttgagaaaatgatataatttagtgtaatcataggtgtcgtgtc |
29812666 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #27
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 234 - 274
Target Start/End: Original strand, 2424619 - 2424659
Alignment:
Q |
234 |
cgctaataatttgataaaatcatataattcagtgtgattat |
274 |
Q |
|
|
|||||||||||||| ||||||| |||||||||||| ||||| |
|
|
T |
2424619 |
cgctaataatttgagaaaatcacataattcagtgtaattat |
2424659 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #28
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 186 - 285
Target Start/End: Complemental strand, 4017897 - 4017797
Alignment:
Q |
186 |
ctatgaagcacggagac-ggccacgacacagacaccgacacattgacaccgctaataatttgataaaatcatataattcagtgtgattataggtgtcgtg |
284 |
Q |
|
|
||||||||||| || || || |||||||| ||||||||||| ||||| | ||||||||||| |||| |||||||| ||||| || ||| |||||||| |
|
|
T |
4017897 |
ctatgaagcacagacactggacacgacacggacaccgacacgccgacacggataataatttgagaaaacgatataatttagtgtaatcataagtgtcgtg |
4017798 |
T |
|
Q |
285 |
t |
285 |
Q |
|
|
| |
|
|
T |
4017797 |
t |
4017797 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #29
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 237 - 285
Target Start/End: Complemental strand, 8239101 - 8239053
Alignment:
Q |
237 |
taataatttgataaaatcatataattcagtgtgattataggtgtcgtgt |
285 |
Q |
|
|
||||||||| | |||||| ||||||||||||| |||||| ||||||||| |
|
|
T |
8239101 |
taataatttaagaaaatcttataattcagtgtaattatatgtgtcgtgt |
8239053 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #30
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 190 - 265
Target Start/End: Complemental strand, 11722197 - 11722121
Alignment:
Q |
190 |
gaagcacggagac-ggccacgacacagacaccgacacattgacaccgctaataatttgataaaatcatataattcag |
265 |
Q |
|
|
|||||||||| || || |||||||| ||||| ||||| ||||||||||| ||||||| ||||||| ||||||||| |
|
|
T |
11722197 |
gaagcacggataccggacacgacacggacactgacacgccgacaccgctaacaatttgagaaaatcacataattcag |
11722121 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #31
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 206 - 282
Target Start/End: Complemental strand, 22602792 - 22602716
Alignment:
Q |
206 |
cacgacacagacaccgacacattgacaccgctaataatttgataaaatcatataattcagtgtgattataggtgtcg |
282 |
Q |
|
|
|||||||||| ||| ||||| ||||||| ||| |||||| ||||||| |||||||||||| |||||| |||||| |
|
|
T |
22602792 |
cacgacacaggcactgacacgccgacaccgtaaattatttgagaaaatcacataattcagtgtaattatatgtgtcg |
22602716 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #32
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 229 - 281
Target Start/End: Original strand, 22868042 - 22868094
Alignment:
Q |
229 |
gacaccgctaataatttgataaaatcatataattcagtgtgattataggtgtc |
281 |
Q |
|
|
|||||| |||||||| ||| ||||||| |||||||||||| |||||| ||||| |
|
|
T |
22868042 |
gacaccactaataatatgagaaaatcacataattcagtgtaattatatgtgtc |
22868094 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #33
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 229 - 273
Target Start/End: Original strand, 23191896 - 23191940
Alignment:
Q |
229 |
gacaccgctaataatttgataaaatcatataattcagtgtgatta |
273 |
Q |
|
|
||||||||||||||||||| ||||||| ||| |||||||| |||| |
|
|
T |
23191896 |
gacaccgctaataatttgagaaaatcacatatttcagtgtaatta |
23191940 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #34
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 229 - 273
Target Start/End: Original strand, 25481902 - 25481946
Alignment:
Q |
229 |
gacaccgctaataatttgataaaatcatataattcagtgtgatta |
273 |
Q |
|
|
||||| ||||||||||||| ||||||| |||||||||||| |||| |
|
|
T |
25481902 |
gacacagctaataatttgaaaaaatcacataattcagtgtaatta |
25481946 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #35
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 206 - 282
Target Start/End: Complemental strand, 26329464 - 26329388
Alignment:
Q |
206 |
cacgacacagacaccgacacattgacaccgctaataatttgataaaatcatataattcagtgtgattataggtgtcg |
282 |
Q |
|
|
|||||||||||||| ||||| |||| || ||||||||||| |||| || | |||||||||| |||||| |||||| |
|
|
T |
26329464 |
cacgacacagacactgacacgccgacatcgttaataatttgagaaaaacacacaattcagtgtaattatatgtgtcg |
26329388 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #36
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 206 - 282
Target Start/End: Original strand, 27945018 - 27945094
Alignment:
Q |
206 |
cacgacacagacaccgacacattgacaccgctaataatttgataaaatcatataattcagtgtgattataggtgtcg |
282 |
Q |
|
|
|||||||| ||||| ||||| |||||| |||||||||||| ||||| | |||||||||||| |||| | |||||| |
|
|
T |
27945018 |
cacgacacggacactgacacgccgacaccactaataatttgagaaaattacataattcagtgtaattacaagtgtcg |
27945094 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #37
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 187 - 286
Target Start/End: Original strand, 43249950 - 43250050
Alignment:
Q |
187 |
tatgaagcacggagac-ggccacgacacagacaccgacacattgacaccgctaataatttgataaaatcatataattcagtgtgattataggtgtcgtgt |
285 |
Q |
|
|
||||||||||||| || || || ||||| ||||| ||||| ||||| | ||||||||||| ||||| | ||||| |||||| |||||| ||||||||| |
|
|
T |
43249950 |
tatgaagcacggacaccggacaagacacggacactgacacgccgacacggataataatttgagaaaatgacataatacagtgtaattataagtgtcgtgt |
43250049 |
T |
|
Q |
286 |
c |
286 |
Q |
|
|
| |
|
|
T |
43250050 |
c |
43250050 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0020 (Bit Score: 46; Significance: 4e-17; HSPs: 1)
Name: scaffold0020
Description:
Target: scaffold0020; HSP #1
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 207 - 308
Target Start/End: Complemental strand, 135393 - 135293
Alignment:
Q |
207 |
acgacacagacaccgacacattgacaccgctaataatttgataaaatcatataattcagtgtgattataggtgtcgtgtcacgtgtccgacaccgggaca |
306 |
Q |
|
|
|||||||||||||| ||||| ||||| ||||||||||||| ||||||| ||||||| |||| |||||| |||||| || ||||||||||||| ||||| |
|
|
T |
135393 |
acgacacagacaccaacacaccgacactgctaataatttgagaaaatcacataattctgtgtaattatatgtgtcg-gtgtcgtgtccgacaccaggaca |
135295 |
T |
|
Q |
307 |
cg |
308 |
Q |
|
|
|| |
|
|
T |
135294 |
cg |
135293 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3 (Bit Score: 46; Significance: 4e-17; HSPs: 36)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 215 - 276
Target Start/End: Complemental strand, 23870632 - 23870571
Alignment:
Q |
215 |
gacaccgacacattgacaccgctaataatttgataaaatcatataattcagtgtgattatag |
276 |
Q |
|
|
||||| ||||| | ||||||||||||||||||| |||||||||||||||||||||||||||| |
|
|
T |
23870632 |
gacacggacacgtcgacaccgctaataatttgaaaaaatcatataattcagtgtgattatag |
23870571 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #2
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 179 - 282
Target Start/End: Original strand, 26508060 - 26508163
Alignment:
Q |
179 |
ttacacactatgaagcacggagacggccacgacacagacaccgacacattgacaccgctaataatttgataaaatcatataattcagtgtgattataggt |
278 |
Q |
|
|
|||||| |||||||| ||||| |||| ||||| ||||| || ||||| |||||| ||||||||||||| ||||||| |||||||||||| |||| | || |
|
|
T |
26508060 |
ttacacgctatgaagaacggatacggacacgatacagatactgacacgctgacacagctaataatttgaaaaaatcacataattcagtgtaattacaagt |
26508159 |
T |
|
Q |
279 |
gtcg |
282 |
Q |
|
|
|||| |
|
|
T |
26508160 |
gtcg |
26508163 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #3
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 229 - 282
Target Start/End: Original strand, 8383257 - 8383310
Alignment:
Q |
229 |
gacaccgctaataatttgataaaatcatataattcagtgtgattataggtgtcg |
282 |
Q |
|
|
||||||||||||||||||| |||||||||||||||||||| |||||| |||||| |
|
|
T |
8383257 |
gacaccgctaataatttgagaaaatcatataattcagtgtaattataagtgtcg |
8383310 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #4
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 209 - 286
Target Start/End: Complemental strand, 34307859 - 34307782
Alignment:
Q |
209 |
gacacagacaccgacacattgacaccgctaataatttgataaaatcatataattcagtgtgattataggtgtcgtgtc |
286 |
Q |
|
|
||||||||||| |||| |||||||||||||||||||| ||||||| ||| |||||||| |||||| |||||||||| |
|
|
T |
34307859 |
gacacagacacgaacacgctgacaccgctaataatttgagaaaatcacatatttcagtgtaattataagtgtcgtgtc |
34307782 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #5
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 230 - 282
Target Start/End: Complemental strand, 17005677 - 17005625
Alignment:
Q |
230 |
acaccgctaataatttgataaaatcatataattcagtgtgattataggtgtcg |
282 |
Q |
|
|
||||| ||||||||||||||||||||||||||||||||| |||||| |||||| |
|
|
T |
17005677 |
acaccactaataatttgataaaatcatataattcagtgtaattataagtgtcg |
17005625 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #6
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 229 - 307
Target Start/End: Complemental strand, 13620823 - 13620744
Alignment:
Q |
229 |
gacaccgctaataatttgataaaatcatataattcagtgtgattataggtgtc-gtgtcacgtgtccgacaccgggacac |
307 |
Q |
|
|
|||||||||| |||||||| ||||||| || |||||||| ||||| ||||| |||||||||||||||||||||||||| |
|
|
T |
13620823 |
gacaccgctagtaatttgagaaaatcacatgattcagtgcagttatatgtgtctgtgtcacgtgtccgacaccgggacac |
13620744 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #7
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 229 - 282
Target Start/End: Original strand, 7928450 - 7928503
Alignment:
Q |
229 |
gacaccgctaataatttgataaaatcatataattcagtgtgattataggtgtcg |
282 |
Q |
|
|
||||||||||||||||||| ||||||| |||||||||||| |||||| |||||| |
|
|
T |
7928450 |
gacaccgctaataatttgaaaaaatcacataattcagtgtaattatatgtgtcg |
7928503 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #8
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 201 - 282
Target Start/End: Original strand, 11658787 - 11658868
Alignment:
Q |
201 |
acggccacgacacagacaccgacacattgacaccgctaataatttgataaaatcatataattcagtgtgattataggtgtcg |
282 |
Q |
|
|
|||| |||||||||||||| |||||| ||| || ||||||||||| |||||| ||||||||||||||||||| |||||| |
|
|
T |
11658787 |
acggacacgacacagacactgacacaccaacatcgttaataatttgagaaaatcgcataattcagtgtgattatatgtgtcg |
11658868 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #9
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 230 - 282
Target Start/End: Complemental strand, 8039893 - 8039841
Alignment:
Q |
230 |
acaccgctaataatttgataaaatcatataattcagtgtgattataggtgtcg |
282 |
Q |
|
|
|||||||||||||||||| ||||| |||||||||||||| |||||| |||||| |
|
|
T |
8039893 |
acaccgctaataatttgagaaaattatataattcagtgtaattatatgtgtcg |
8039841 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #10
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 215 - 263
Target Start/End: Original strand, 15544679 - 15544727
Alignment:
Q |
215 |
gacaccgacacattgacaccgctaataatttgataaaatcatataattc |
263 |
Q |
|
|
||||| ||||| ||||||||||||||||||||||||||||| ||||||| |
|
|
T |
15544679 |
gacactgacacgttgacaccgctaataatttgataaaatcacataattc |
15544727 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #11
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 215 - 275
Target Start/End: Complemental strand, 29112353 - 29112293
Alignment:
Q |
215 |
gacaccgacacattgacaccgctaataatttgataaaatcatataattcagtgtgattata |
275 |
Q |
|
|
||||| ||||| |||||||| ||||| |||||| |||||||||||||||||||| |||||| |
|
|
T |
29112353 |
gacactgacacgttgacaccactaattatttgagaaaatcatataattcagtgtaattata |
29112293 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #12
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 186 - 273
Target Start/End: Complemental strand, 26492307 - 26492220
Alignment:
Q |
186 |
ctatgaagcacggagacggccacgacacagacaccgacacattgacaccgctaataatttgataaaatcatataattcagtgtgatta |
273 |
Q |
|
|
|||||||||||| | |||| |||||||| ||||| ||||| |||| ||||||||||||| ||||||||| |||||||||| |||| |
|
|
T |
26492307 |
ctatgaagcacgaatacggacacgacacggacactgacacgccgacagagctaataatttgaaaaaatcatacaattcagtgtaatta |
26492220 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #13
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 236 - 282
Target Start/End: Original strand, 29508451 - 29508497
Alignment:
Q |
236 |
ctaataatttgataaaatcatataattcagtgtgattataggtgtcg |
282 |
Q |
|
|
|||||||||||| |||||||||||||||||||| |||||| |||||| |
|
|
T |
29508451 |
ctaataatttgaaaaaatcatataattcagtgtaattatatgtgtcg |
29508497 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #14
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 291 - 333
Target Start/End: Original strand, 29508522 - 29508564
Alignment:
Q |
291 |
gtccgacaccgggacacgtctcgtccaagaagtgtccgtgctt |
333 |
Q |
|
|
||||||||||||||||||||| |||||||||||||||||||| |
|
|
T |
29508522 |
gtccgacaccgggacacgtctaatccaagaagtgtccgtgctt |
29508564 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #15
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 206 - 282
Target Start/End: Original strand, 11665921 - 11665997
Alignment:
Q |
206 |
cacgacacagacaccgacacattgacaccgctaataatttgataaaatcatataattcagtgtgattataggtgtcg |
282 |
Q |
|
|
||||||||| |||| ||||| |||| |||||||||||||||||||||| | |||| ||||| |||||| |||||| |
|
|
T |
11665921 |
cacgacacacacactaacacaccgacaacgctaataatttgataaaatcacacaatttagtgtaattatatgtgtcg |
11665997 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 201 - 301
Target Start/End: Complemental strand, 14223940 - 14223841
Alignment:
Q |
201 |
acggccacgacacagacaccgacacattgacaccgctaataatttgataaaatcatataattcagtgtgattataggtgtcgtgtcacgtgtccgacacc |
300 |
Q |
|
|
|||| |||||||||||||||||||| ||||| | ||||||||||| |||| |||||||| ||||| | ||| |||||||||| |||||||||||| |
|
|
T |
14223940 |
acggacacgacacagacaccgacacgccgacacagataataatttgagaaaacgatataatttagtgtattcataagtgtcgtgtc-ggtgtccgacacc |
14223842 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #17
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 230 - 281
Target Start/End: Original strand, 1550141 - 1550192
Alignment:
Q |
230 |
acaccgctaataatttgataaaatcatataattcagtgtgattataggtgtc |
281 |
Q |
|
|
|||||||||||||||||| ||||||| | ||||||||| |||||||||||| |
|
|
T |
1550141 |
acaccgctaataatttgaaaaaatcacactattcagtgtaattataggtgtc |
1550192 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #18
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 237 - 300
Target Start/End: Original strand, 25892468 - 25892530
Alignment:
Q |
237 |
taataatttgataaaatcatataattcagtgtgattataggtgtcgtgtcacgtgtccgacacc |
300 |
Q |
|
|
||||||||| | ||||| |||||||||||||| || ||||||||||||||| ||||| |||||| |
|
|
T |
25892468 |
taataatttaagaaaatgatataattcagtgtaatcataggtgtcgtgtca-gtgtcggacacc |
25892530 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #19
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 229 - 275
Target Start/End: Complemental strand, 10690321 - 10690275
Alignment:
Q |
229 |
gacaccgctaataatttgataaaatcatataattcagtgtgattata |
275 |
Q |
|
|
||||||||||||||| ||| ||||||| |||||||||||| |||||| |
|
|
T |
10690321 |
gacaccgctaataatctgagaaaatcacataattcagtgtaattata |
10690275 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #20
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 216 - 266
Target Start/End: Complemental strand, 21257058 - 21257008
Alignment:
Q |
216 |
acaccgacacattgacaccgctaataatttgataaaatcatataattcagt |
266 |
Q |
|
|
|||||||||| |||||| ||||||||||||| ||||||| |||||||||| |
|
|
T |
21257058 |
acaccgacacgatgacacagctaataatttgaaaaaatcacataattcagt |
21257008 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #21
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 237 - 287
Target Start/End: Complemental strand, 25652082 - 25652032
Alignment:
Q |
237 |
taataatttgataaaatcatataattcagtgtgattataggtgtcgtgtca |
287 |
Q |
|
|
||||||||||| ||||| |||||||||||||| |||||||||| |||||| |
|
|
T |
25652082 |
taataatttgagaaaatgatataattcagtgtagttataggtgttgtgtca |
25652032 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #22
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 186 - 282
Target Start/End: Complemental strand, 40993432 - 40993341
Alignment:
Q |
186 |
ctatgaagcacggagacggccacgacacagacaccgacacattgacaccgctaataatttgataaaa-tcatataattcagtgtgattataggtgtcg |
282 |
Q |
|
|
|||||||||||||| |||| |||||||| |||||| | ||||||||||||||||| | |||| ||| |||||||||||| |||||| |||||| |
|
|
T |
40993432 |
ctatgaagcacggatacggacacgacacggacacc------tcgacaccgctaataatttaaaaaaaatcacataattcagtgtaattatatgtgtcg |
40993341 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #23
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 215 - 281
Target Start/End: Complemental strand, 49505227 - 49505161
Alignment:
Q |
215 |
gacaccgacacattgacaccgctaataatttgataaaatcatataattcagtgtgattataggtgtc |
281 |
Q |
|
|
||||||||||| || |||||||||||||||| ||||||| |||||| ||||| |||||| ||||| |
|
|
T |
49505227 |
gacaccgacacgcagagaccgctaataatttgagaaaatcacataatttagtgtaattatatgtgtc |
49505161 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 237 - 286
Target Start/End: Original strand, 15864841 - 15864890
Alignment:
Q |
237 |
taataatttgataaaatcatataattcagtgtgattataggtgtcgtgtc |
286 |
Q |
|
|
||||||||||| ||||| |||||||| ||||| || |||||||||||||| |
|
|
T |
15864841 |
taataatttgaaaaaatgatataatttagtgtaatcataggtgtcgtgtc |
15864890 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 286 - 331
Target Start/End: Complemental strand, 16000002 - 15999957
Alignment:
Q |
286 |
cacgtgtccgacaccgggacacgtctcgtccaagaagtgtccgtgc |
331 |
Q |
|
|
||||||||||||||||||||||| || |||||| ||||||||||| |
|
|
T |
16000002 |
cacgtgtccgacaccgggacacgcctaatccaaggagtgtccgtgc |
15999957 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 219 - 280
Target Start/End: Complemental strand, 16192819 - 16192758
Alignment:
Q |
219 |
ccgacacattgacaccgctaataatttgataaaatcatataattcagtgtgattataggtgt |
280 |
Q |
|
|
|||||||| ||||||| ||||||||||| ||||| | |||||||||||| |||||| |||| |
|
|
T |
16192819 |
ccgacacaccgacaccgttaataatttgagaaaataacataattcagtgtaattatatgtgt |
16192758 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 209 - 282
Target Start/End: Complemental strand, 22774149 - 22774076
Alignment:
Q |
209 |
gacacagacaccgacacattgacaccgctaataatttgataaaatcatataattcagtgtgattataggtgtcg |
282 |
Q |
|
|
||||||||||| ||||| | |||||| ||||||||| || ||| ||| ||| |||||||| |||||| |||||| |
|
|
T |
22774149 |
gacacagacacagacacgtcgacaccactaataattagacaaagtcacatatttcagtgtaattataagtgtcg |
22774076 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 235 - 280
Target Start/End: Complemental strand, 25948940 - 25948895
Alignment:
Q |
235 |
gctaataatttgataaaatcatataattcagtgtgattataggtgt |
280 |
Q |
|
|
||||||||||||| ||||||| |||||||||||| |||||| |||| |
|
|
T |
25948940 |
gctaataatttgaaaaaatcacataattcagtgtaattataagtgt |
25948895 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 229 - 286
Target Start/End: Complemental strand, 35994796 - 35994740
Alignment:
Q |
229 |
gacaccgctaataatttgataaaatcatataattcagtgtgattataggtgtcgtgtc |
286 |
Q |
|
|
||||| ||||||||||||| ||||||| |||||||||||| |||| | |||||||||| |
|
|
T |
35994796 |
gacacagctaataatttga-aaaatcacataattcagtgtaattacaagtgtcgtgtc |
35994740 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #30
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 229 - 273
Target Start/End: Complemental strand, 4987350 - 4987306
Alignment:
Q |
229 |
gacaccgctaataatttgataaaatcatataattcagtgtgatta |
273 |
Q |
|
|
||||| ||||||||||||| ||||||| |||||||||||| |||| |
|
|
T |
4987350 |
gacacagctaataatttgaaaaaatcacataattcagtgtaatta |
4987306 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #31
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 230 - 333
Target Start/End: Original strand, 11610522 - 11610623
Alignment:
Q |
230 |
acaccgctaataatttgataaaatcatataattcagtgtgattataggtgtcgtgtcacgtgtccgacaccgggacacgtctcgtccaagaagtgtccgt |
329 |
Q |
|
|
|||||||||||||||| | ||||||| |||||||||||| ||| | ||||| || ||||||||||| ||||||||| || || || ||||||||| |
|
|
T |
11610522 |
acaccgctaataatttaaaaaaatcacataattcagtgtagttacaagtgtcaagt--cgtgtccgacatcgggacacgcctaatctgaggagtgtccgt |
11610619 |
T |
|
Q |
330 |
gctt |
333 |
Q |
|
|
|||| |
|
|
T |
11610620 |
gctt |
11610623 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #32
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 237 - 273
Target Start/End: Complemental strand, 15796345 - 15796309
Alignment:
Q |
237 |
taataatttgataaaatcatataattcagtgtgatta |
273 |
Q |
|
|
||||||||||| |||||||||||||||||||| |||| |
|
|
T |
15796345 |
taataatttgaaaaaatcatataattcagtgtaatta |
15796309 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #33
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 206 - 286
Target Start/End: Complemental strand, 24205123 - 24205043
Alignment:
Q |
206 |
cacgacacagacaccgacacattgacaccgctaataatttgataaaatcatataattcagtgtgattataggtgtcgtgtc |
286 |
Q |
|
|
|||||||| ||||| ||||| ||||| | ||||||||||| ||||| | ||||| |||||| |||||| |||||||||| |
|
|
T |
24205123 |
cacgacacggacactgacacgccgacacggataataatttgagaaaatgacataatacagtgtaattataagtgtcgtgtc |
24205043 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #34
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 206 - 274
Target Start/End: Original strand, 25064886 - 25064954
Alignment:
Q |
206 |
cacgacacagacaccgacacattgacaccgctaataatttgataaaatcatataattcagtgtgattat |
274 |
Q |
|
|
||||||||||||| ||||| |||||||||||| |||||| ||||||| |||||| ||||| ||||| |
|
|
T |
25064886 |
cacgacacagacattgacacgccgacaccgctaatgatttgaaaaaatcacataatttagtgtaattat |
25064954 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #35
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 229 - 281
Target Start/End: Complemental strand, 32804599 - 32804547
Alignment:
Q |
229 |
gacaccgctaataatttgataaaatcatataattcagtgtgattataggtgtc |
281 |
Q |
|
|
||||||| ||||||||||| ||||||| |||||| ||||| |||||| ||||| |
|
|
T |
32804599 |
gacaccgttaataatttgagaaaatcacataatttagtgtaattatatgtgtc |
32804547 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #36
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 228 - 268
Target Start/End: Complemental strand, 51206413 - 51206373
Alignment:
Q |
228 |
tgacaccgctaataatttgataaaatcatataattcagtgt |
268 |
Q |
|
|
|||||| ||||||||||||| ||||||| |||||||||||| |
|
|
T |
51206413 |
tgacacagctaataatttgaaaaaatcacataattcagtgt |
51206373 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8 (Bit Score: 43; Significance: 0.000000000000003; HSPs: 29)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 207 - 281
Target Start/End: Complemental strand, 24362283 - 24362209
Alignment:
Q |
207 |
acgacacagacaccgacacattgacaccgctaataatttgataaaatcatataattcagtgtgattataggtgtc |
281 |
Q |
|
|
||||||||||||||||||| ||||||||||||||||||| | ||||| |||||||||||| |||||| ||||| |
|
|
T |
24362283 |
acgacacagacaccgacacgccgacaccgctaataatttgagagaatcacataattcagtgtaattatatgtgtc |
24362209 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #2
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 215 - 282
Target Start/End: Original strand, 34897071 - 34897138
Alignment:
Q |
215 |
gacaccgacacattgacaccgctaataatttgataaaatcatataattcagtgtgattataggtgtcg |
282 |
Q |
|
|
||||| ||||| | ||||||||||||||||||| ||||||| |||||||||||| |||||| |||||| |
|
|
T |
34897071 |
gacacagacacgtcgacaccgctaataatttgagaaaatcacataattcagtgtaattatatgtgtcg |
34897138 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #3
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 206 - 282
Target Start/End: Complemental strand, 12570590 - 12570514
Alignment:
Q |
206 |
cacgacacagacaccgacacattgacaccgctaataatttgataaaatcatataattcagtgtgattataggtgtcg |
282 |
Q |
|
|
||||| |||||||||||||| ||||||| ||||||||||| | |||| || |||||| ||||| |||||| |||||| |
|
|
T |
12570590 |
cacgatacagacaccgacacgttgacactgctaataatttaagaaaaacacataattaagtgtaattatatgtgtcg |
12570514 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #4
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 206 - 286
Target Start/End: Original strand, 39820406 - 39820486
Alignment:
Q |
206 |
cacgacacagacaccgacacattgacaccgctaataatttgataaaatcatataattcagtgtgattataggtgtcgtgtc |
286 |
Q |
|
|
|||||||||||||||||||| |||| | ||||||||||| ||||| |||||||| ||||| || |||||||||||||| |
|
|
T |
39820406 |
cacgacacagacaccgacacgctgacccgtataataatttgagaaaatgatataatttagtgtaatcataggtgtcgtgtc |
39820486 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #5
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 195 - 282
Target Start/End: Original strand, 24669399 - 24669486
Alignment:
Q |
195 |
acggagacggccacgacacagacaccgacacattgacaccgctaataatttgataaaatcatataattcagtgtgattataggtgtcg |
282 |
Q |
|
|
||||| |||| |||||||||||||| ||||| |||||||| ||||||||||| |||| | |||||||||||| |||| | |||||| |
|
|
T |
24669399 |
acggacacggacacgacacagacactgacacgctgacaccgttaataatttgaggaaattacataattcagtgtaattacaagtgtcg |
24669486 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #6
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 235 - 281
Target Start/End: Original strand, 3025557 - 3025603
Alignment:
Q |
235 |
gctaataatttgataaaatcatataattcagtgtgattataggtgtc |
281 |
Q |
|
|
||||||||||||| ||||||| |||||||||||| |||||||||||| |
|
|
T |
3025557 |
gctaataatttgagaaaatcacataattcagtgtaattataggtgtc |
3025603 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #7
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 215 - 285
Target Start/End: Original strand, 3658133 - 3658203
Alignment:
Q |
215 |
gacaccgacacattgacaccgctaataatttgataaaatcatataattcagtgtgattataggtgtcgtgt |
285 |
Q |
|
|
||||||||||||| ||||| | ||||||||||| ||||| || || |||||||| || ||||||||||||| |
|
|
T |
3658133 |
gacaccgacacatcgacacggataataatttgagaaaataatgtagttcagtgtaatcataggtgtcgtgt |
3658203 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #8
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 237 - 282
Target Start/End: Complemental strand, 11927137 - 11927092
Alignment:
Q |
237 |
taataatttgataaaatcatataattcagtgtgattataggtgtcg |
282 |
Q |
|
|
||||||||||||||||||| |||||||||||| |||||| |||||| |
|
|
T |
11927137 |
taataatttgataaaatcacataattcagtgtaattatatgtgtcg |
11927092 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #9
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 229 - 282
Target Start/End: Complemental strand, 12606888 - 12606835
Alignment:
Q |
229 |
gacaccgctaataatttgataaaatcatataattcagtgtgattataggtgtcg |
282 |
Q |
|
|
||||| ||||||||||||| |||||||||||||||| ||| |||||| |||||| |
|
|
T |
12606888 |
gacactgctaataatttgagaaaatcatataattcaatgtaattatatgtgtcg |
12606835 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #10
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 228 - 268
Target Start/End: Complemental strand, 18067994 - 18067954
Alignment:
Q |
228 |
tgacaccgctaataatttgataaaatcatataattcagtgt |
268 |
Q |
|
|
|||||||||||||||||||| ||||||| |||||||||||| |
|
|
T |
18067994 |
tgacaccgctaataatttgagaaaatcacataattcagtgt |
18067954 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #11
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 215 - 275
Target Start/End: Complemental strand, 39954352 - 39954292
Alignment:
Q |
215 |
gacaccgacacattgacaccgctaataatttgataaaatcatataattcagtgtgattata |
275 |
Q |
|
|
||||||||||| ||||||||||||||||||| ||||||| |||||| ||||| |||||| |
|
|
T |
39954352 |
gacaccgacacgccgacaccgctaataatttgagaaaatcacataatttagtgtaattata |
39954292 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #12
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 206 - 273
Target Start/End: Complemental strand, 4673507 - 4673440
Alignment:
Q |
206 |
cacgacacagacaccgacacattgacaccgctaataatttgataaaatcatataattcagtgtgatta |
273 |
Q |
|
|
|||||||||||||| ||||| ||||| | ||||||||||| ||||||||| |||||||||| |||| |
|
|
T |
4673507 |
cacgacacagacactgacacgccgacacagataataatttgaaaaaatcataaaattcagtgtaatta |
4673440 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #13
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 206 - 273
Target Start/End: Original strand, 8343293 - 8343360
Alignment:
Q |
206 |
cacgacacagacaccgacacattgacaccgctaataatttgataaaatcatataattcagtgtgatta |
273 |
Q |
|
|
|||||||| |||||||||||| |||| ||||||||||||| ||||||| |||||| ||||| |||| |
|
|
T |
8343293 |
cacgacactgacaccgacacaccgacatagctaataatttgaaaaaatcacataatttagtgtaatta |
8343360 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #14
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 229 - 275
Target Start/End: Original strand, 4611534 - 4611580
Alignment:
Q |
229 |
gacaccgctaataatttgataaaatcatataattcagtgtgattata |
275 |
Q |
|
|
||||||||||||||||||| ||||| | |||||||||||| |||||| |
|
|
T |
4611534 |
gacaccgctaataatttgagaaaataacataattcagtgtaattata |
4611580 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #15
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 212 - 282
Target Start/End: Complemental strand, 20679471 - 20679401
Alignment:
Q |
212 |
acagacaccgacacattgacaccgctaataatttgataaaatcatataattcagtgtgattataggtgtcg |
282 |
Q |
|
|
|||||||| |||| | |||||| |||||||||||| ||||||| ||| |||||||| |||||| |||||| |
|
|
T |
20679471 |
acagacactgacatgtcgacacccctaataatttgagaaaatcacatagttcagtgtaattataagtgtcg |
20679401 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #16
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 228 - 282
Target Start/End: Original strand, 25566840 - 25566894
Alignment:
Q |
228 |
tgacaccgctaataatttgataaaatcatataattcagtgtgattataggtgtcg |
282 |
Q |
|
|
|||||| ||||||||||||| ||||||| |||||||||||| |||| | |||||| |
|
|
T |
25566840 |
tgacacagctaataatttgaaaaaatcacataattcagtgtaattacaagtgtcg |
25566894 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #17
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 206 - 280
Target Start/End: Original strand, 36934647 - 36934721
Alignment:
Q |
206 |
cacgacacagacaccgacacattgacaccgctaataatttgataaaatcatataattcagtgtgattataggtgt |
280 |
Q |
|
|
|||||||| ||||| |||| | |||||||||||||||| || ||||||| |||||||| ||| |||||| |||| |
|
|
T |
36934647 |
cacgacacggacactaacacgtcgacaccgctaataattcgaaaaaatcacataattcattgtaattatatgtgt |
36934721 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #18
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 237 - 282
Target Start/End: Original strand, 11944673 - 11944718
Alignment:
Q |
237 |
taataatttgataaaatcatataattcagtgtgattataggtgtcg |
282 |
Q |
|
|
||||||||||||||||||| |||| ||||||| |||||| |||||| |
|
|
T |
11944673 |
taataatttgataaaatcacataactcagtgtaattatatgtgtcg |
11944718 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #19
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 214 - 275
Target Start/End: Complemental strand, 12570808 - 12570747
Alignment:
Q |
214 |
agacaccgacacattgacaccgctaataatttgataaaatcatataattcagtgtgattata |
275 |
Q |
|
|
|||||||||||| ||||||||||||||||||| | |||| | |||||| ||||| |||||| |
|
|
T |
12570808 |
agacaccgacacgttgacaccgctaataatttaagaaaaacgcataattaagtgtaattata |
12570747 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 229 - 282
Target Start/End: Complemental strand, 13844655 - 13844602
Alignment:
Q |
229 |
gacaccgctaataatttgataaaatcatataattcagtgtgattataggtgtcg |
282 |
Q |
|
|
||||| ||||||||||||| ||||||| |||||| ||||| |||||| |||||| |
|
|
T |
13844655 |
gacactgctaataatttgagaaaatcacataattgagtgtaattatatgtgtcg |
13844602 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 229 - 282
Target Start/End: Complemental strand, 31236636 - 31236583
Alignment:
Q |
229 |
gacaccgctaataatttgataaaatcatataattcagtgtgattataggtgtcg |
282 |
Q |
|
|
||||| ||||||||||||| ||||||| |||||||| ||| |||||| |||||| |
|
|
T |
31236636 |
gacactgctaataatttgagaaaatcacataattcaatgtaattatatgtgtcg |
31236583 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #22
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 206 - 282
Target Start/End: Complemental strand, 2572138 - 2572062
Alignment:
Q |
206 |
cacgacacagacaccgacacattgacaccgctaataatttgataaaatcatataattcagtgtgattataggtgtcg |
282 |
Q |
|
|
|||||||| || |||||||| | ||||| |||||||||||| ||||||| |||||| ||||| |||| | |||||| |
|
|
T |
2572138 |
cacgacacggataccgacacgtcgacacacctaataatttgaaaaaatcacataatttagtgtaattacaagtgtcg |
2572062 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #23
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 228 - 264
Target Start/End: Complemental strand, 18069191 - 18069155
Alignment:
Q |
228 |
tgacaccgctaataatttgataaaatcatataattca |
264 |
Q |
|
|
|||||||||||||||||||| ||||||| |||||||| |
|
|
T |
18069191 |
tgacaccgctaataatttgagaaaatcaaataattca |
18069155 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #24
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 289 - 333
Target Start/End: Original strand, 22652057 - 22652101
Alignment:
Q |
289 |
gtgtccgacaccgggacacgtctcgtccaagaagtgtccgtgctt |
333 |
Q |
|
|
||||||||||||||||||||||| ||| || ||||||||||||| |
|
|
T |
22652057 |
gtgtccgacaccgggacacgtctaatccgaggagtgtccgtgctt |
22652101 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #25
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 206 - 302
Target Start/End: Original strand, 22850321 - 22850416
Alignment:
Q |
206 |
cacgacacagacaccgacacattgacaccgctaataatttgataaaatcatataattcagtgtgattataggtgtcgtgtcacgtgtccgacaccgg |
302 |
Q |
|
|
||||| ||||||||||||||| | |||||| | ||||||||| |||| | |||||| | ||| ||||||||| || ||||| ||||||||||||| |
|
|
T |
22850321 |
cacgaaacagacaccgacacactaacaccgatgataatttgagaaaaagacataattaaatgtaattataggtttcatgtca-atgtccgacaccgg |
22850416 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #26
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 229 - 281
Target Start/End: Original strand, 27101515 - 27101566
Alignment:
Q |
229 |
gacaccgctaataatttgataaaatcatataattcagtgtgattataggtgtc |
281 |
Q |
|
|
||||||||||||||||||| ||||||| |||||| |||| |||||||||||| |
|
|
T |
27101515 |
gacaccgctaataatttgaaaaaatcacataatttagtg-aattataggtgtc |
27101566 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #27
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 187 - 275
Target Start/End: Original strand, 29775994 - 29776082
Alignment:
Q |
187 |
tatgaagcacggagacggccacgacacagacaccgacacattgacaccgctaataatttgataaaatcatataattcagtgtgattata |
275 |
Q |
|
|
||||||||||| | |||| |||||||| |||| |||| | ||||| ||||||||||||| ||||||| ||||||||| | |||||| |
|
|
T |
29775994 |
tatgaagcacgaatacggtcacgacacggacattgacaagtcgacactgctaataatttgagaaaatcacgtaattcagtataattata |
29776082 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #28
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 211 - 275
Target Start/End: Complemental strand, 34201123 - 34201059
Alignment:
Q |
211 |
cacagacaccgacacattgacaccgctaataatttgataaaatcatataattcagtgtgattata |
275 |
Q |
|
|
|||||| |||||||||||||||| ||||||||||| ||||| | |||||||| ||| |||||| |
|
|
T |
34201123 |
cacagataccgacacattgacactaataataatttgagaaaatgacataattcaatgtaattata |
34201059 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #29
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 234 - 282
Target Start/End: Original strand, 34222952 - 34223000
Alignment:
Q |
234 |
cgctaataatttgataaaatcatataattcagtgtgattataggtgtcg |
282 |
Q |
|
|
|||||||||||| ||||||||| |||||| ||||| |||||| |||||| |
|
|
T |
34222952 |
cgctaataatttaataaaatcacataattaagtgtaattatatgtgtcg |
34223000 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5 (Bit Score: 43; Significance: 0.000000000000003; HSPs: 33)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 232 - 286
Target Start/End: Complemental strand, 5468034 - 5467980
Alignment:
Q |
232 |
accgctaataatttgataaaatcatataattcagtgtgattataggtgtcgtgtc |
286 |
Q |
|
|
|||| ||||||||||||||||||| |||||||||||| ||||||||||||||||| |
|
|
T |
5468034 |
accgataataatttgataaaatcacataattcagtgtaattataggtgtcgtgtc |
5467980 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #2
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 206 - 287
Target Start/End: Original strand, 25863181 - 25863262
Alignment:
Q |
206 |
cacgacacagacaccgacacattgacaccgctaataatttgataaaatcatataattcagtgtgattataggtgtcgtgtca |
287 |
Q |
|
|
||||||||||||| |||||| | |||| ||||||||||| ||||| |||||||||||||| |||||| ||||||||||| |
|
|
T |
25863181 |
cacgacacagacatcgacacgtcgacatgtataataatttgagaaaatgatataattcagtgtaattataagtgtcgtgtca |
25863262 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #3
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 229 - 282
Target Start/End: Complemental strand, 28588733 - 28588680
Alignment:
Q |
229 |
gacaccgctaataatttgataaaatcatataattcagtgtgattataggtgtcg |
282 |
Q |
|
|
||||||| ||||||||||| ||||||| |||||||||||| ||||||||||||| |
|
|
T |
28588733 |
gacaccggtaataatttgagaaaatcacataattcagtgtaattataggtgtcg |
28588680 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #4
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 212 - 275
Target Start/End: Original strand, 12927637 - 12927700
Alignment:
Q |
212 |
acagacaccgacacattgacaccgctaataatttgataaaatcatataattcagtgtgattata |
275 |
Q |
|
|
|||||||| |||||| |||| |||||||||||||| |||||||||||||| ||||| |||||| |
|
|
T |
12927637 |
acagacacggacacaccgacatcgctaataatttgagaaaatcatataatttagtgtaattata |
12927700 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #5
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 186 - 333
Target Start/End: Original strand, 2436878 - 2437025
Alignment:
Q |
186 |
ctatgaagcacggagacggccac--gacacagacaccgacacattgacaccgctaataatttgataaaatcatataattcagtgtgattataggtgtcgt |
283 |
Q |
|
|
|||||||||||||| |||| ||| ||||| ||||| ||||| |||||||||||||||||| ||||||| ||||||| |||||||||| |||||| |
|
|
T |
2436878 |
ctatgaagcacggatacggacaccggacac-gacactgacacgccgacaccgctaataatttgcaaaaatcacataattcgttgtgattatatgtgtcg- |
2436975 |
T |
|
Q |
284 |
gtcacgtgtccgacaccgggacacgtctcgtccaagaagtgtccgtgctt |
333 |
Q |
|
|
|| ||||||||||||| |||||| || ||| || ||||| ||||||| |
|
|
T |
2436976 |
gtgtcgtgtccgacaccaagacacgcctaatccgaggagtgttcgtgctt |
2437025 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #6
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 229 - 282
Target Start/End: Original strand, 3966503 - 3966556
Alignment:
Q |
229 |
gacaccgctaataatttgataaaatcatataattcagtgtgattataggtgtcg |
282 |
Q |
|
|
||||||||||||||||||| ||||||| | |||||||||| |||||| |||||| |
|
|
T |
3966503 |
gacaccgctaataatttgagaaaatcacacaattcagtgtaattatatgtgtcg |
3966556 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #7
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 222 - 275
Target Start/End: Original strand, 10022625 - 10022678
Alignment:
Q |
222 |
acacattgacaccgctaataatttgataaaatcatataattcagtgtgattata |
275 |
Q |
|
|
|||||| |||| || | |||||||||||||||||||||||||||||| |||||| |
|
|
T |
10022625 |
acacatcgacatcgttgataatttgataaaatcatataattcagtgtaattata |
10022678 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #8
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 206 - 287
Target Start/End: Complemental strand, 14574131 - 14574051
Alignment:
Q |
206 |
cacgacacagacaccgacacattgacaccgctaataatttgataaaatcatataattcagtgtgattataggtgtcgtgtca |
287 |
Q |
|
|
||||||||| |||||||||| ||||| |||||||||||| |||| |||||||||||||| ||||||||| |||||||| |
|
|
T |
14574131 |
cacgacacaaacaccgacacgccgacacgagtaataatttgatgaaatgatataattcagtgtaattataggt-tcgtgtca |
14574051 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #9
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 229 - 282
Target Start/End: Original strand, 23220983 - 23221036
Alignment:
Q |
229 |
gacaccgctaataatttgataaaatcatataattcagtgtgattataggtgtcg |
282 |
Q |
|
|
||||||||||||||||||||||||||| |||||| ||||| || ||| |||||| |
|
|
T |
23220983 |
gacaccgctaataatttgataaaatcacataatttagtgttatcatatgtgtcg |
23221036 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #10
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 228 - 280
Target Start/End: Complemental strand, 6471949 - 6471897
Alignment:
Q |
228 |
tgacaccgctaataatttgataaaatcatataattcagtgtgattataggtgt |
280 |
Q |
|
|
|||||| ||||||||||||| ||||||| |||||||||||| |||||| |||| |
|
|
T |
6471949 |
tgacacggctaataatttgagaaaatcacataattcagtgtaattatatgtgt |
6471897 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #11
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 209 - 281
Target Start/End: Original strand, 27144443 - 27144515
Alignment:
Q |
209 |
gacacagacaccgacacattgacaccgctaataatttgataaaatcatataattcagtgtgattataggtgtc |
281 |
Q |
|
|
||||||||||| ||||| ||||||||||||||||||| |||||| |||||| ||||| |||||| ||||| |
|
|
T |
27144443 |
gacacagacactgacacgccgacaccgctaataatttgaggaaatcacataatttagtgtaattatatgtgtc |
27144515 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #12
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 230 - 282
Target Start/End: Complemental strand, 30502446 - 30502394
Alignment:
Q |
230 |
acaccgctaataatttgataaaatcatataattcagtgtgattataggtgtcg |
282 |
Q |
|
|
|||||||||||||||||| ||||||| ||||||||||| |||||| |||||| |
|
|
T |
30502446 |
acaccgctaataatttgagaaaatcacttaattcagtgtaattatatgtgtcg |
30502394 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #13
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 230 - 282
Target Start/End: Complemental strand, 30542789 - 30542737
Alignment:
Q |
230 |
acaccgctaataatttgataaaatcatataattcagtgtgattataggtgtcg |
282 |
Q |
|
|
|||||||||||||||||| ||||||| ||||||||||| |||||| |||||| |
|
|
T |
30542789 |
acaccgctaataatttgagaaaatcacttaattcagtgtaattatatgtgtcg |
30542737 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #14
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 212 - 280
Target Start/End: Original strand, 39205863 - 39205931
Alignment:
Q |
212 |
acagacaccgacacattgacaccgctaataatttgataaaatcatataattcagtgtgattataggtgt |
280 |
Q |
|
|
|||||||| ||||| | ||||| ||||||||||||| |||||||||||||| |||| |||||| |||| |
|
|
T |
39205863 |
acagacacggacacgtcgacactgctaataatttgagaaaatcatataattaggtgtaattatatgtgt |
39205931 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #15
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 229 - 333
Target Start/End: Complemental strand, 39696058 - 39695956
Alignment:
Q |
229 |
gacaccgctaataatttgataaaatcatataattcagtgtgattataggtgtcgtgtcacgtgtccgacaccgggacacgtctcgtccaagaagtgtccg |
328 |
Q |
|
|
||||||| |||||||||| ||||| |||||||| ||||| || |||||||||||||| |||||||||| ||||||||| || ||| || |||||| | |
|
|
T |
39696058 |
gacaccgacaataatttgagaaaatgatataatttagtgtaatcataggtgtcgtgtc-ggtgtccgaca-cgggacacgcctaatcctaggagtgtcgg |
39695961 |
T |
|
Q |
329 |
tgctt |
333 |
Q |
|
|
||||| |
|
|
T |
39695960 |
tgctt |
39695956 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #16
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 206 - 282
Target Start/End: Complemental strand, 23016073 - 23015995
Alignment:
Q |
206 |
cacgacacagacaccgacacatt--gacaccgctaataatttgataaaatcatataattcagtgtgattataggtgtcg |
282 |
Q |
|
|
|||||||| ||||||||||| | |||| || |||| |||||| ||||||| |||||||||||| ||||||||||||| |
|
|
T |
23016073 |
cacgacacggacaccgacactctctgacatcgttaatcatttgagaaaatcacataattcagtgtaattataggtgtcg |
23015995 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #17
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 231 - 282
Target Start/End: Original strand, 34879352 - 34879403
Alignment:
Q |
231 |
caccgctaataatttgataaaatcatataattcagtgtgattataggtgtcg |
282 |
Q |
|
|
||||||||| ||||||| |||||||||||||||||||| || ||| |||||| |
|
|
T |
34879352 |
caccgctaaaaatttgagaaaatcatataattcagtgtaataatatgtgtcg |
34879403 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #18
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 206 - 273
Target Start/End: Complemental strand, 42488135 - 42488068
Alignment:
Q |
206 |
cacgacacagacaccgacacattgacaccgctaataatttgataaaatcatataattcagtgtgatta |
273 |
Q |
|
|
|||||||||||||| ||||| | ||||||| | ||||||| ||||||| |||||||||| ||| |||| |
|
|
T |
42488135 |
cacgacacagacactgacacgtcgacaccgttgataatttaataaaattatataattcaatgtaatta |
42488068 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #19
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 225 - 275
Target Start/End: Complemental strand, 17593785 - 17593735
Alignment:
Q |
225 |
cattgacaccgctaataatttgataaaatcatataattcagtgtgattata |
275 |
Q |
|
|
|||||| |||||||||||||||| ||||||| ||||||||||| |||||| |
|
|
T |
17593785 |
cattgaaaccgctaataatttgagaaaatcacgtaattcagtgtaattata |
17593735 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #20
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 227 - 281
Target Start/End: Original strand, 25817493 - 25817547
Alignment:
Q |
227 |
ttgacaccgctaataatttgataaaatcatataattcagtgtgattataggtgtc |
281 |
Q |
|
|
||||||| ||||||||||| | |||||||||| ||||||| |||||||| ||||| |
|
|
T |
25817493 |
ttgacactgctaataatttaaaaaaatcatatgattcagtatgattatatgtgtc |
25817547 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #21
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 215 - 273
Target Start/End: Original strand, 39698527 - 39698585
Alignment:
Q |
215 |
gacaccgacacattgacaccgctaataatttgataaaatcatataattcagtgtgatta |
273 |
Q |
|
|
||||| ||||| |||||| ||||||||||||| ||||||| |||||||||||| |||| |
|
|
T |
39698527 |
gacactgacacgctgacacagctaataatttgaaaaaatcacataattcagtgtaatta |
39698585 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 209 - 262
Target Start/End: Complemental strand, 7175098 - 7175045
Alignment:
Q |
209 |
gacacagacaccgacacattgacaccgctaataatttgataaaatcatataatt |
262 |
Q |
|
|
||||| ||||| ||||||| ||||||| ||||||||||| ||||||| |||||| |
|
|
T |
7175098 |
gacacggacactgacacatcgacaccgttaataatttgagaaaatcacataatt |
7175045 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 237 - 286
Target Start/End: Complemental strand, 7997217 - 7997168
Alignment:
Q |
237 |
taataatttgataaaatcatataattcagtgtgattataggtgtcgtgtc |
286 |
Q |
|
|
||||||||||| ||||| ||||||| |||||| |||||| |||||||||| |
|
|
T |
7997217 |
taataatttgagaaaatgatataatacagtgtaattataagtgtcgtgtc |
7997168 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 215 - 268
Target Start/End: Original strand, 19438329 - 19438382
Alignment:
Q |
215 |
gacaccgacacattgacaccgctaataatttgataaaatcatataattcagtgt |
268 |
Q |
|
|
||||| ||||||| |||| |||| ||||||||| ||||||| |||||||||||| |
|
|
T |
19438329 |
gacactgacacatcgacatcgctgataatttgagaaaatcacataattcagtgt |
19438382 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 229 - 282
Target Start/End: Complemental strand, 21191115 - 21191062
Alignment:
Q |
229 |
gacaccgctaataatttgataaaatcatataattcagtgtgattataggtgtcg |
282 |
Q |
|
|
||||| ||||||||||||| ||||||| |||||||||||| |||| | |||||| |
|
|
T |
21191115 |
gacacagctaataatttgaaaaaatcacataattcagtgtaattacaagtgtcg |
21191062 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 228 - 281
Target Start/End: Complemental strand, 32630795 - 32630742
Alignment:
Q |
228 |
tgacaccgctaataatttgataaaatcatataattcagtgtgattataggtgtc |
281 |
Q |
|
|
|||||||| ||||||||||| ||||| |||||||||| ||| |||||| ||||| |
|
|
T |
32630795 |
tgacaccgataataatttgagaaaattatataattcaatgtaattatatgtgtc |
32630742 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 229 - 282
Target Start/End: Complemental strand, 41091316 - 41091263
Alignment:
Q |
229 |
gacaccgctaataatttgataaaatcatataattcagtgtgattataggtgtcg |
282 |
Q |
|
|
||||| |||||| |||||| ||||||| |||||||||||| |||||| |||||| |
|
|
T |
41091316 |
gacactgctaatgatttgagaaaatcacataattcagtgtaattatatgtgtcg |
41091263 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 237 - 286
Target Start/End: Original strand, 43554529 - 43554578
Alignment:
Q |
237 |
taataatttgataaaatcatataattcagtgtgattataggtgtcgtgtc |
286 |
Q |
|
|
||||||||||| ||||| |||||||| ||||| || |||||||||||||| |
|
|
T |
43554529 |
taataatttgagaaaatgatataatttagtgtaatcataggtgtcgtgtc |
43554578 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #29
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 209 - 281
Target Start/End: Complemental strand, 19168900 - 19168828
Alignment:
Q |
209 |
gacacagacaccgacacattgacaccgctaataatttgataaaatcatataattcagtgtgattataggtgtc |
281 |
Q |
|
|
||||| ||||| |||||| ||||||||| |||||||||||||||| || ||||||||| || ||| ||||| |
|
|
T |
19168900 |
gacacggacactgacacacctacaccgctattaatttgataaaatcacattattcagtgtaatcatatgtgtc |
19168828 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #30
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 230 - 282
Target Start/End: Complemental strand, 21576803 - 21576751
Alignment:
Q |
230 |
acaccgctaataatttgataaaatcatataattcagtgtgattataggtgtcg |
282 |
Q |
|
|
|||| ||||||||||||| ||||||| |||||||||||| |||| | |||||| |
|
|
T |
21576803 |
acacagctaataatttgaaaaaatcacataattcagtgtaattacaagtgtcg |
21576751 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #31
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 229 - 273
Target Start/End: Original strand, 27932235 - 27932279
Alignment:
Q |
229 |
gacaccgctaataatttgataaaatcatataattcagtgtgatta |
273 |
Q |
|
|
||||||||||||||||||| ||||| | |||||||||||| |||| |
|
|
T |
27932235 |
gacaccgctaataatttgagaaaattacataattcagtgtaatta |
27932279 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #32
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 230 - 282
Target Start/End: Original strand, 36838544 - 36838596
Alignment:
Q |
230 |
acaccgctaataatttgataaaatcatataattcagtgtgattataggtgtcg |
282 |
Q |
|
|
|||||||||||||||||| ||||| | |||||| ||||| |||||| |||||| |
|
|
T |
36838544 |
acaccgctaataatttgagaaaattacataatttagtgtaattatatgtgtcg |
36838596 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #33
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 236 - 307
Target Start/End: Complemental strand, 38464416 - 38464344
Alignment:
Q |
236 |
ctaataatttgataaaatcatataattcagtgtgattataggtgtc-gtgtcacgtgtccgacaccgggacac |
307 |
Q |
|
|
|||||||||||| ||||||| || ||||| || |||||| ||||| ||| ||| |||||||||||||||||| |
|
|
T |
38464416 |
ctaataatttgagaaaatcacattattcattgaaattataagtgtcagtggcacatgtccgacaccgggacac |
38464344 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2 (Bit Score: 43; Significance: 0.000000000000003; HSPs: 38)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 232 - 282
Target Start/End: Complemental strand, 34691861 - 34691811
Alignment:
Q |
232 |
accgctaataatttgataaaatcatataattcagtgtgattataggtgtcg |
282 |
Q |
|
|
||||||||||||||||||||||||||||||||||||| |||||| |||||| |
|
|
T |
34691861 |
accgctaataatttgataaaatcatataattcagtgtaattatatgtgtcg |
34691811 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #2
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 232 - 282
Target Start/End: Complemental strand, 34714273 - 34714223
Alignment:
Q |
232 |
accgctaataatttgataaaatcatataattcagtgtgattataggtgtcg |
282 |
Q |
|
|
||||||||||||||||||||||||||||||||||||| |||||| |||||| |
|
|
T |
34714273 |
accgctaataatttgataaaatcatataattcagtgtaattatatgtgtcg |
34714223 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #3
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 229 - 282
Target Start/End: Complemental strand, 37411303 - 37411250
Alignment:
Q |
229 |
gacaccgctaataatttgataaaatcatataattcagtgtgattataggtgtcg |
282 |
Q |
|
|
||||||||||||||||||| ||||||| ||||||||||||||||||| |||||| |
|
|
T |
37411303 |
gacaccgctaataatttgagaaaatcacataattcagtgtgattatatgtgtcg |
37411250 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #4
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 206 - 273
Target Start/End: Complemental strand, 12941017 - 12940950
Alignment:
Q |
206 |
cacgacacagacaccgacacattgacaccgctaataatttgataaaatcatataattcagtgtgatta |
273 |
Q |
|
|
|||||||| ||||| ||||| ||||||| |||||||||||| |||||||||||||||||||| |||| |
|
|
T |
12941017 |
cacgacacggacactgacacgttgacacaactaataatttgaaaaaatcatataattcagtgtaatta |
12940950 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #5
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 206 - 280
Target Start/End: Original strand, 21616739 - 21616813
Alignment:
Q |
206 |
cacgacacagacaccgacacattgacaccgctaataatttgataaaatcatataattcagtgtgattataggtgt |
280 |
Q |
|
|
|||||||| ||||| ||||| ||||||||||||||||||| ||||||| |||||||||||| |||||| |||| |
|
|
T |
21616739 |
cacgacacggacacggacacgccgacaccgctaataatttgagaaaatcacataattcagtgtaattatatgtgt |
21616813 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #6
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 209 - 282
Target Start/End: Original strand, 23718006 - 23718079
Alignment:
Q |
209 |
gacacagacaccgacacattgacaccgctaataatttgataaaatcatataattcagtgtgattataggtgtcg |
282 |
Q |
|
|
||||| ||||| |||||| ||||||||||||||||||| ||| ||| |||||||||||| |||||| |||||| |
|
|
T |
23718006 |
gacacggacactgacacaccgacaccgctaataatttgagaaagtcacataattcagtgtaattatatgtgtcg |
23718079 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #7
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 209 - 282
Target Start/End: Original strand, 24105678 - 24105751
Alignment:
Q |
209 |
gacacagacaccgacacattgacaccgctaataatttgataaaatcatataattcagtgtgattataggtgtcg |
282 |
Q |
|
|
||||| ||||| |||||| ||||||||||||||||||| ||| ||| |||||||||||| |||||| |||||| |
|
|
T |
24105678 |
gacacggacactgacacaccgacaccgctaataatttgagaaagtcacataattcagtgtaattatatgtgtcg |
24105751 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #8
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 206 - 282
Target Start/End: Complemental strand, 20539756 - 20539680
Alignment:
Q |
206 |
cacgacacagacaccgacacattgacaccgctaataatttgataaaatcatataattcagtgtgattataggtgtcg |
282 |
Q |
|
|
|||||||| ||||| ||||| | ||||| ||||||||||||| |||||||||||||| ||||| |||| | |||||| |
|
|
T |
20539756 |
cacgacacggacactgacacgtcgacacagctaataatttgaaaaaatcatataatttagtgtaattacaagtgtcg |
20539680 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #9
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 186 - 282
Target Start/End: Complemental strand, 30404952 - 30404856
Alignment:
Q |
186 |
ctatgaagcacggagacggccacgacacagacaccgacacattgacaccgctaataatttgataaaatcatataattcagtgtgattataggtgtcg |
282 |
Q |
|
|
|||||||||||||| |||| || ||||| ||||| ||||| ||||| | ||||||||||| ||||||| |||||||||||| |||| | |||||| |
|
|
T |
30404952 |
ctatgaagcacggatacggacatgacacggacactgacacgccgacacggttaataatttgaaaaaatcacataattcagtgtaattacaagtgtcg |
30404856 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #10
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 186 - 281
Target Start/End: Complemental strand, 27286394 - 27286299
Alignment:
Q |
186 |
ctatgaagcacggagacggccacgacacagacaccgacacattgacaccgctaataatttgataaaatcatataattcagtgtgattataggtgtc |
281 |
Q |
|
|
|||||||||||||| || | ||||| || ||||| || || |||| ||||||||||||||||| |||| |||||| ||||| |||||||||||| |
|
|
T |
27286394 |
ctatgaagcacggacacagacacgatacggacactgatacgccgacaacgctaataatttgataagatcacataattaagtgtaattataggtgtc |
27286299 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #11
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 215 - 282
Target Start/End: Complemental strand, 29970622 - 29970555
Alignment:
Q |
215 |
gacaccgacacattgacaccgctaataatttgataaaatcatataattcagtgtgattataggtgtcg |
282 |
Q |
|
|
||||| ||||||||||||||||||||||||||| |||||| ||| |||||||| || ||| |||||| |
|
|
T |
29970622 |
gacactgacacattgacaccgctaataatttgagaaaatcgcatagttcagtgtaatcatatgtgtcg |
29970555 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #12
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 229 - 275
Target Start/End: Original strand, 28677909 - 28677955
Alignment:
Q |
229 |
gacaccgctaataatttgataaaatcatataattcagtgtgattata |
275 |
Q |
|
|
||||||||||||||||||| ||||||| |||||||||||| |||||| |
|
|
T |
28677909 |
gacaccgctaataatttgaaaaaatcacataattcagtgtaattata |
28677955 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #13
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 215 - 281
Target Start/End: Original strand, 31808063 - 31808129
Alignment:
Q |
215 |
gacaccgacacattgacaccgctaataatttgataaaatcatataattcagtgtgattataggtgtc |
281 |
Q |
|
|
||||| |||||| ||||||||||||||||| | ||||||| |||||||||||| |||||| ||||| |
|
|
T |
31808063 |
gacactgacacaccgacaccgctaataatttaacaaaatcacataattcagtgtaattatatgtgtc |
31808129 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #14
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 228 - 282
Target Start/End: Original strand, 44860319 - 44860373
Alignment:
Q |
228 |
tgacaccgctaataatttgataaaatcatataattcagtgtgattataggtgtcg |
282 |
Q |
|
|
|||||||||||||||||||| |||||| |||||||||||| |||||| |||||| |
|
|
T |
44860319 |
tgacaccgctaataatttgagaaaatcgcataattcagtgtaattatatgtgtcg |
44860373 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #15
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 209 - 286
Target Start/End: Complemental strand, 23354731 - 23354654
Alignment:
Q |
209 |
gacacagacaccgacacattgacaccgctaataatttgataaaatcatataattcagtgtgattataggtgtcgtgtc |
286 |
Q |
|
|
||||| |||||||||| |||||| | ||||||||||| ||||| |||||||| ||||| || |||||||||||||| |
|
|
T |
23354731 |
gacacggacaccgacatgctgacacagataataatttgagaaaatgatataatttagtgtaatcataggtgtcgtgtc |
23354654 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #16
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 237 - 286
Target Start/End: Original strand, 25544489 - 25544538
Alignment:
Q |
237 |
taataatttgataaaatcatataattcagtgtgattataggtgtcgtgtc |
286 |
Q |
|
|
||||||||||| ||||| |||||||||||||| || |||||||||||||| |
|
|
T |
25544489 |
taataatttgagaaaatgatataattcagtgtaatcataggtgtcgtgtc |
25544538 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #17
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 229 - 333
Target Start/End: Complemental strand, 42832335 - 42832237
Alignment:
Q |
229 |
gacaccgctaataatttgataaaatcatataattcagtgtgattataggtgtcgtgtcacgtgtccgacaccgggacacgtctcgtccaagaagtgtccg |
328 |
Q |
|
|
||||||||||||||||||| ||||| | ||| |||||||| |||||| |||||| ||||||||| |||||||||| || |||||| ||||||| |
|
|
T |
42832335 |
gacaccgctaataatttgagaaaattacatatttcagtgtaattataagtgtcg------gtgtccgactccgggacacgcctaatccaaggagtgtcct |
42832242 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 206 - 274
Target Start/End: Complemental strand, 21782900 - 21782832
Alignment:
Q |
206 |
cacgacacagacaccgacacattgacaccgctaataatttgataaaatcatataattcagtgtgattat |
274 |
Q |
|
|
||||||||| |||| ||||| ||||| ||||||||||||| ||||||| |||||||||||| ||||| |
|
|
T |
21782900 |
cacgacacaaacactgacacgccgacactgctaataatttgagaaaatcacataattcagtgtaattat |
21782832 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 230 - 274
Target Start/End: Original strand, 28412351 - 28412395
Alignment:
Q |
230 |
acaccgctaataatttgataaaatcatataattcagtgtgattat |
274 |
Q |
|
|
|||||| ||||||||||||||||||| |||||||||||| ||||| |
|
|
T |
28412351 |
acaccgttaataatttgataaaatcacataattcagtgtaattat |
28412395 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #20
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 221 - 268
Target Start/End: Complemental strand, 22084899 - 22084852
Alignment:
Q |
221 |
gacacattgacaccgctaataatttgataaaatcatataattcagtgt |
268 |
Q |
|
|
||||||| |||||| ||||||||||| |||||||||||||||||||| |
|
|
T |
22084899 |
gacacatcaacaccgttaataatttgagaaaatcatataattcagtgt |
22084852 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #21
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 229 - 268
Target Start/End: Complemental strand, 24975384 - 24975345
Alignment:
Q |
229 |
gacaccgctaataatttgataaaatcatataattcagtgt |
268 |
Q |
|
|
||||||||||||||||||| |||||| ||||||||||||| |
|
|
T |
24975384 |
gacaccgctaataatttgagaaaatcgtataattcagtgt |
24975345 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #22
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 207 - 282
Target Start/End: Complemental strand, 36756425 - 36756350
Alignment:
Q |
207 |
acgacacagacaccgacacattgacaccgctaataatttgataaaatcatataattcagtgtgattataggtgtcg |
282 |
Q |
|
|
||||||||||||| ||||| | ||||| |||||||||||| |||| | |||||||||||| |||||| |||||| |
|
|
T |
36756425 |
acgacacagacactgacacgtcgacacaactaataatttgaagaaataacataattcagtgtaattataagtgtcg |
36756350 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #23
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 236 - 307
Target Start/End: Original strand, 18622613 - 18622690
Alignment:
Q |
236 |
ctaataatttgataaaatcatataattcagtgtgattata------ggtgtcgtgtcacgtgtccgacaccgggacac |
307 |
Q |
|
|
|||||||||| ||||||||| |||||||||||| |||||| |||||||||||| ||||| |||||||||||| |
|
|
T |
18622613 |
ctaataatttaataaaatcacataattcagtgtaattatacgtgttggtgtcgtgtcatatgtcctacaccgggacac |
18622690 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 229 - 266
Target Start/End: Original strand, 1327978 - 1328015
Alignment:
Q |
229 |
gacaccgctaataatttgataaaatcatataattcagt |
266 |
Q |
|
|
||||||||||||||||||| ||||||||| |||||||| |
|
|
T |
1327978 |
gacaccgctaataatttgagaaaatcataaaattcagt |
1328015 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 229 - 274
Target Start/End: Complemental strand, 16069313 - 16069268
Alignment:
Q |
229 |
gacaccgctaataatttgataaaatcatataattcagtgtgattat |
274 |
Q |
|
|
||||||| ||||||||| | |||||||||||||||||||| ||||| |
|
|
T |
16069313 |
gacaccgttaataatttaaaaaaatcatataattcagtgtaattat |
16069268 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 229 - 274
Target Start/End: Original strand, 18276521 - 18276566
Alignment:
Q |
229 |
gacaccgctaataatttgataaaatcatataattcagtgtgattat |
274 |
Q |
|
|
||||||||||||||||||| ||||||| ||||||||||| ||||| |
|
|
T |
18276521 |
gacaccgctaataatttgagaaaatcacttaattcagtgtaattat |
18276566 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 229 - 286
Target Start/End: Original strand, 19573978 - 19574035
Alignment:
Q |
229 |
gacaccgctaataatttgataaaatcatataattcagtgtgattataggtgtcgtgtc |
286 |
Q |
|
|
||||||| ||||||||| | ||||| | |||||||||||| |||||||||| |||||| |
|
|
T |
19573978 |
gacaccgataataatttaagaaaataacataattcagtgtaattataggtggcgtgtc |
19574035 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 237 - 282
Target Start/End: Complemental strand, 30527646 - 30527601
Alignment:
Q |
237 |
taataatttgataaaatcatataattcagtgtgattataggtgtcg |
282 |
Q |
|
|
||||||||||| |||||||||||||| ||||| |||||| |||||| |
|
|
T |
30527646 |
taataatttgagaaaatcatataatttagtgtaattatatgtgtcg |
30527601 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #29
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 210 - 282
Target Start/End: Complemental strand, 4882774 - 4882702
Alignment:
Q |
210 |
acacagacaccgacacattgacaccgctaataatttgataaaatcatataattcagtgtgattataggtgtcg |
282 |
Q |
|
|
||||||| || ||||| | || ||||||||| |||||| ||||| |||||||||||||| |||| | |||||| |
|
|
T |
4882774 |
acacagatactgacacgtcgataccgctaattatttgaaaaaatgatataattcagtgtaattacaagtgtcg |
4882702 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #30
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 232 - 264
Target Start/End: Complemental strand, 6045972 - 6045940
Alignment:
Q |
232 |
accgctaataatttgataaaatcatataattca |
264 |
Q |
|
|
|||||||||||||||||||||||||| |||||| |
|
|
T |
6045972 |
accgctaataatttgataaaatcatacaattca |
6045940 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #31
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 229 - 265
Target Start/End: Complemental strand, 8950374 - 8950338
Alignment:
Q |
229 |
gacaccgctaataatttgataaaatcatataattcag |
265 |
Q |
|
|
||||||||||||||||||| |||||| |||||||||| |
|
|
T |
8950374 |
gacaccgctaataatttgaaaaaatcttataattcag |
8950338 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #32
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 229 - 285
Target Start/End: Complemental strand, 10535818 - 10535762
Alignment:
Q |
229 |
gacaccgctaataatttgataaaatcatataattcagtgtgattataggtgtcgtgt |
285 |
Q |
|
|
||||||| ||||||||||| ||||| | |||||||||||| || ||| ||||||||| |
|
|
T |
10535818 |
gacaccgataataatttgagaaaatgacataattcagtgtaatcataagtgtcgtgt |
10535762 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #33
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 186 - 282
Target Start/End: Complemental strand, 18841115 - 18841019
Alignment:
Q |
186 |
ctatgaagcacggagacggccacgacacagacaccgacacattgacaccgctaataatttgataaaatcatataattcagtgtgattataggtgtcg |
282 |
Q |
|
|
|||||||||||| | |||| ||||||| ||||| ||||| |||||| |||||||||||| ||||| | |||||| ||||| |||| | |||||| |
|
|
T |
18841115 |
ctatgaagcacgtatacggacacgacatggacactgacacgctgacacaactaataatttgaaaaaattacataattaagtgtaattacaagtgtcg |
18841019 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #34
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 231 - 275
Target Start/End: Original strand, 25080902 - 25080946
Alignment:
Q |
231 |
caccgctaataatttgataaaatcatataattcagtgtgattata |
275 |
Q |
|
|
|||||||||||||||||||| |||| |||| ||||||| |||||| |
|
|
T |
25080902 |
caccgctaataatttgataagatcacataagtcagtgtaattata |
25080946 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #35
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 230 - 282
Target Start/End: Original strand, 31018591 - 31018643
Alignment:
Q |
230 |
acaccgctaataatttgataaaatcatataattcagtgtgattataggtgtcg |
282 |
Q |
|
|
|||||||||||||||| | ||||||| || ||| ||||| ||||||||||||| |
|
|
T |
31018591 |
acaccgctaataatttcagaaaatcacatgatttagtgtaattataggtgtcg |
31018643 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #36
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 242 - 282
Target Start/End: Complemental strand, 38355933 - 38355893
Alignment:
Q |
242 |
atttgataaaatcatataattcagtgtgattataggtgtcg |
282 |
Q |
|
|
|||||| ||||||| ||||||||||||||||||| |||||| |
|
|
T |
38355933 |
atttgagaaaatcacataattcagtgtgattatatgtgtcg |
38355893 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #37
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 230 - 282
Target Start/End: Original strand, 39279676 - 39279728
Alignment:
Q |
230 |
acaccgctaataatttgataaaatcatataattcagtgtgattataggtgtcg |
282 |
Q |
|
|
|||||| ||||||| ||| ||||||| |||||||||||| |||||| |||||| |
|
|
T |
39279676 |
acaccgttaataatatgagaaaatcaaataattcagtgtaattatatgtgtcg |
39279728 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #38
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 229 - 273
Target Start/End: Original strand, 39323264 - 39323308
Alignment:
Q |
229 |
gacaccgctaataatttgataaaatcatataattcagtgtgatta |
273 |
Q |
|
|
||||||||||||||||||| ||||| | |||||||||||| |||| |
|
|
T |
39323264 |
gacaccgctaataatttgacaaaattacataattcagtgtaatta |
39323308 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4 (Bit Score: 42; Significance: 0.00000000000001; HSPs: 28)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 229 - 333
Target Start/End: Original strand, 37203264 - 37203366
Alignment:
Q |
229 |
gacaccgctaataatttgataaaatcatataattcagtgtgattataggtgtcgtgtcacgtgtccgacaccgggacacgtctcgtccaagaagtgtccg |
328 |
Q |
|
|
||||| ||||||||||||| ||||| | |||||| ||||| |||| | |||| ||||| | ||||||||||||||||||||| ||| ||||||||||| |
|
|
T |
37203264 |
gacacggctaataatttgaaaaaatgacataatttagtgtaattacaagtgtagtgtc--gggtccgacaccgggacacgtctaatccgagaagtgtccg |
37203361 |
T |
|
Q |
329 |
tgctt |
333 |
Q |
|
|
||||| |
|
|
T |
37203362 |
tgctt |
37203366 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #2
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 229 - 335
Target Start/End: Complemental strand, 3712568 - 3712456
Alignment:
Q |
229 |
gacaccgctaataatttgataaaatcatataattcagtgtgattataggtgtc--gtgtc----acgtgtccgacaccgggacacgtctcgtccaagaag |
322 |
Q |
|
|
||||||||||||||||||| |||||||| ||||||| ||| |||||| ||||| ||||| |||||||||||||||||||||| || || || || |
|
|
T |
3712568 |
gacaccgctaataatttgagaaaatcatgtaattcaatgtaattatatgtgtctggtgtcgtagacgtgtccgacaccgggacacggctaatctgaggag |
3712469 |
T |
|
Q |
323 |
tgtccgtgcttta |
335 |
Q |
|
|
||||||||||||| |
|
|
T |
3712468 |
tgtccgtgcttta |
3712456 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #3
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 186 - 286
Target Start/End: Complemental strand, 22440702 - 22440602
Alignment:
Q |
186 |
ctatgaagcacggagacggccacgacacagacaccgacacattgacaccgctaataatttgataaaatcatataattcagtgtgattataggtgtcgtgt |
285 |
Q |
|
|
||||||| |||||| || | ||||||| ||||| || |||| ||||||| ||||||||||| ||||||| |||||||||||| |||||| ||| ||||| |
|
|
T |
22440702 |
ctatgaaacacggatacagacacgacatggacactgatacatcgacaccgttaataatttgagaaaatcacataattcagtgtaattatatgtgacgtgt |
22440603 |
T |
|
Q |
286 |
c |
286 |
Q |
|
|
| |
|
|
T |
22440602 |
c |
22440602 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #4
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 206 - 301
Target Start/End: Original strand, 24343484 - 24343578
Alignment:
Q |
206 |
cacgacacagacaccgacacattgacaccgctaataatttgataaaatcatataattcagtgtgattataggtgtcgtgtcacgtgtccgacaccg |
301 |
Q |
|
|
|||||||| ||| ||||||| ||||| | ||||||||||| ||||| | |||||||||||| ||||||||||||||||| ||||||||||||| |
|
|
T |
24343484 |
cacgacacggacgccgacacgccgacacggataataatttgagaaaattacataattcagtgtaattataggtgtcgtgtc-ggtgtccgacaccg |
24343578 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #5
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 215 - 265
Target Start/End: Complemental strand, 56488583 - 56488533
Alignment:
Q |
215 |
gacaccgacacattgacaccgctaataatttgataaaatcatataattcag |
265 |
Q |
|
|
||||||||||| ||||||||||||| ||||||| ||||||||||||||||| |
|
|
T |
56488583 |
gacaccgacacgttgacaccgctaacaatttgagaaaatcatataattcag |
56488533 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #6
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 206 - 295
Target Start/End: Complemental strand, 14126193 - 14126104
Alignment:
Q |
206 |
cacgacacagacaccgacacattgacaccgctaataatttgataaaatcatataattcagtgtgattataggtgtcgtgtcacgtgtccg |
295 |
Q |
|
|
|||||||||||||| |||| ||||| | ||||||||||||||| ||| |||||||||||| |||||| ||||| |||| |||||||| |
|
|
T |
14126193 |
cacgacacagacactaacacgccgacactgttaataatttgataaagtcacataattcagtgtaattataagtgtcatgtctcgtgtccg |
14126104 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #7
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 235 - 311
Target Start/End: Complemental strand, 35952670 - 35952588
Alignment:
Q |
235 |
gctaataatttgataaaatcatataattcagtgtgattata------ggtgtcgtgtcacgtgtccgacaccgggacacgtct |
311 |
Q |
|
|
|||||||||||||||||||||||||||||| ||| |||||| |||||||||| ||||||||||||| ||||||||| |
|
|
T |
35952670 |
gctaataatttgataaaatcatataattcaatgtaattatatgtatcagtgtcgtgtcgcgtgtccgacaccaagacacgtct |
35952588 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #8
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 188 - 278
Target Start/End: Original strand, 7012025 - 7012115
Alignment:
Q |
188 |
atgaagcacggagacggccacgacacagacaccgacacattgacaccgctaataatttgataaaatcatataattcagtgtgattataggt |
278 |
Q |
|
|
||||||||| || || | || ||||| ||||||||||| ||||||| ||||||||||| ||||| | ||||||||||||||| |||||| |
|
|
T |
7012025 |
atgaagcacagacacagacaggacacggacaccgacacgccgacaccgataataatttgagaaaatgacataattcagtgtgatcataggt |
7012115 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #9
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 229 - 275
Target Start/End: Complemental strand, 8423777 - 8423731
Alignment:
Q |
229 |
gacaccgctaataatttgataaaatcatataattcagtgtgattata |
275 |
Q |
|
|
||||||||||||||||||| ||||||| |||||||||||| |||||| |
|
|
T |
8423777 |
gacaccgctaataatttgagaaaatcacataattcagtgtaattata |
8423731 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #10
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 224 - 274
Target Start/End: Original strand, 56257928 - 56257978
Alignment:
Q |
224 |
acattgacaccgctaataatttgataaaatcatataattcagtgtgattat |
274 |
Q |
|
|
|||| ||||| ||||||||||||| |||||||||||||||||||| ||||| |
|
|
T |
56257928 |
acatggacactgctaataatttgagaaaatcatataattcagtgtaattat |
56257978 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #11
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 229 - 282
Target Start/End: Original strand, 40613450 - 40613503
Alignment:
Q |
229 |
gacaccgctaataatttgataaaatcatataattcagtgtgattataggtgtcg |
282 |
Q |
|
|
||||||||||||| ||||| ||||||| |||||||||||| |||||| |||||| |
|
|
T |
40613450 |
gacaccgctaatattttgagaaaatcacataattcagtgtaattatatgtgtcg |
40613503 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #12
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 209 - 244
Target Start/End: Original strand, 35160982 - 35161017
Alignment:
Q |
209 |
gacacagacaccgacacattgacaccgctaataatt |
244 |
Q |
|
|
||||| |||||||||||||||||||||||||||||| |
|
|
T |
35160982 |
gacacggacaccgacacattgacaccgctaataatt |
35161017 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #13
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 230 - 280
Target Start/End: Original strand, 36635325 - 36635375
Alignment:
Q |
230 |
acaccgctaataatttgataaaatcatataattcagtgtgattataggtgt |
280 |
Q |
|
|
||||| |||||||||||| ||||||| |||||||||||| |||||| |||| |
|
|
T |
36635325 |
acaccactaataatttgagaaaatcacataattcagtgtaattatatgtgt |
36635375 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #14
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 209 - 275
Target Start/End: Complemental strand, 40179715 - 40179649
Alignment:
Q |
209 |
gacacagacaccgacacattgacaccgctaataatttgataaaatcatataattcagtgtgattata |
275 |
Q |
|
|
||||| ||||| ||||| |||||||| ||||| ||||| ||||||| |||||||||||| |||||| |
|
|
T |
40179715 |
gacacggacactgacacgttgacaccattaatagtttgaaaaaatcacataattcagtgtaattata |
40179649 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #15
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 236 - 282
Target Start/End: Complemental strand, 54580075 - 54580029
Alignment:
Q |
236 |
ctaataatttgataaaatcatataattcagtgtgattataggtgtcg |
282 |
Q |
|
|
|||||||||||| ||||||| |||||||||||| |||||| |||||| |
|
|
T |
54580075 |
ctaataatttgaaaaaatcacataattcagtgtaattataagtgtcg |
54580029 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #16
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 229 - 282
Target Start/End: Complemental strand, 999407 - 999354
Alignment:
Q |
229 |
gacaccgctaataatttgataaaatcatataattcagtgtgattataggtgtcg |
282 |
Q |
|
|
|||| |||||||||||||| ||||||||||||| ||||| |||||| |||||| |
|
|
T |
999407 |
gacatcgctaataatttgagtaaatcatataatttagtgtaattatatgtgtcg |
999354 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #17
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 216 - 285
Target Start/End: Complemental strand, 19230381 - 19230312
Alignment:
Q |
216 |
acaccgacacattgacaccgctaataatttgataaaatcatataattcagtgtgattataggtgtcgtgt |
285 |
Q |
|
|
|||| ||||||| |||| | ||||||||||| ||||| | |||||||| ||| |||||||||||||||| |
|
|
T |
19230381 |
acactgacacatggacatagataataatttgagaaaataacataattcaatgtaattataggtgtcgtgt |
19230312 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #18
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 186 - 282
Target Start/End: Original strand, 21945459 - 21945556
Alignment:
Q |
186 |
ctatgaagcacggagac-ggccacgacacagacaccgacacattgacaccgctaataatttgataaaatcatataattcagtgtgattataggtgtcg |
282 |
Q |
|
|
|||||||||||||| || || || ||||||||||| |||| ||||| ||||||||||||| ||||| | |||||||||||| |||| | |||||| |
|
|
T |
21945459 |
ctatgaagcacggacaccggacatgacacagacactgacatgccgacacagctaataatttgaaaaaatgacataattcagtgtaattacaagtgtcg |
21945556 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #19
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 209 - 282
Target Start/End: Complemental strand, 26504378 - 26504305
Alignment:
Q |
209 |
gacacagacaccgacacattgacaccgctaataatttgataaaatcatataattcagtgtgattataggtgtcg |
282 |
Q |
|
|
||||| ||||| || |||| ||||| ||||||||||| | ||||||| ||| |||||||| |||||| |||||| |
|
|
T |
26504378 |
gacacggacactgaaacatcgacactgctaataatttaagaaaatcaaatagttcagtgtaattatatgtgtcg |
26504305 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 224 - 273
Target Start/End: Complemental strand, 28964312 - 28964263
Alignment:
Q |
224 |
acattgacaccgctaataatttgataaaatcatataattcagtgtgatta |
273 |
Q |
|
|
||||||||| ||||||||||||| ||||||| |||||||||||| |||| |
|
|
T |
28964312 |
acattgacatagctaataatttgaaaaaatcacataattcagtgtaatta |
28964263 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 186 - 282
Target Start/End: Original strand, 49430982 - 49431079
Alignment:
Q |
186 |
ctatgaagcacggagacggccacgacacagacaccgacacattgacaccgctaataatttg-ataaaatcatataattcagtgtgattataggtgtcg |
282 |
Q |
|
|
|||||||||||||| |||| |||||| | |||| ||||| ||||| |||||||||||| | ||||||| |||||||||||| |||| | |||||| |
|
|
T |
49430982 |
ctatgaagcacggacacggacacgactcggacagtgacacgccgacacagctaataatttgaaaaaaatcacataattcagtgtaattaaaagtgtcg |
49431079 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #22
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 231 - 275
Target Start/End: Original strand, 903924 - 903968
Alignment:
Q |
231 |
caccgctaataatttgataaaatcatataattcagtgtgattata |
275 |
Q |
|
|
||||| ||||||||||| ||||||| |||||||||||| |||||| |
|
|
T |
903924 |
caccgttaataatttgagaaaatcacataattcagtgtaattata |
903968 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #23
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 230 - 274
Target Start/End: Original strand, 16189710 - 16189754
Alignment:
Q |
230 |
acaccgctaataatttgataaaatcatataattcagtgtgattat |
274 |
Q |
|
|
|||||||||| ||||||| ||||||| |||||||||||| ||||| |
|
|
T |
16189710 |
acaccgctaaaaatttgagaaaatcacataattcagtgtaattat |
16189754 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #24
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 281 - 325
Target Start/End: Complemental strand, 21873359 - 21873315
Alignment:
Q |
281 |
cgtgtcacgtgtccgacaccgggacacgtctcgtccaagaagtgt |
325 |
Q |
|
|
|||| |||||||||||||||||||||||||| |||||| ||||| |
|
|
T |
21873359 |
cgtgacacgtgtccgacaccgggacacgtctaatccaaggagtgt |
21873315 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #25
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 281 - 325
Target Start/End: Complemental strand, 21929220 - 21929176
Alignment:
Q |
281 |
cgtgtcacgtgtccgacaccgggacacgtctcgtccaagaagtgt |
325 |
Q |
|
|
|||| |||||||||||||||||||||||||| |||||| ||||| |
|
|
T |
21929220 |
cgtgacacgtgtccgacaccgggacacgtctaatccaaggagtgt |
21929176 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #26
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 230 - 282
Target Start/End: Original strand, 29205445 - 29205497
Alignment:
Q |
230 |
acaccgctaataatttgataaaatcatataattcagtgtgattataggtgtcg |
282 |
Q |
|
|
|||| ||||||||||||| ||||||| |||||||||||| |||| | |||||| |
|
|
T |
29205445 |
acacggctaataatttgaaaaaatcacataattcagtgtaattacaagtgtcg |
29205497 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #27
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 235 - 275
Target Start/End: Original strand, 30838216 - 30838256
Alignment:
Q |
235 |
gctaataatttgataaaatcatataattcagtgtgattata |
275 |
Q |
|
|
||||||||||||||||||| |||||||| ||||| |||||| |
|
|
T |
30838216 |
gctaataatttgataaaattatataatttagtgtaattata |
30838256 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #28
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 229 - 273
Target Start/End: Complemental strand, 38847071 - 38847027
Alignment:
Q |
229 |
gacaccgctaataatttgataaaatcatataattcagtgtgatta |
273 |
Q |
|
|
||||| ||||||||||||| |||||||||| ||||||||| |||| |
|
|
T |
38847071 |
gacacagctaataatttgaaaaaatcatattattcagtgtaatta |
38847027 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0022 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0022
Description:
Target: scaffold0022; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 206 - 275
Target Start/End: Original strand, 90820 - 90889
Alignment:
Q |
206 |
cacgacacagacaccgacacattgacaccgctaataatttgataaaatcatataattcagtgtgattata |
275 |
Q |
|
|
|||||||||||||| |||||| ||||| ||||||||||| |||||||||||||||||||| |||||| |
|
|
T |
90820 |
cacgacacagacactgacacaccaacaccattaataatttgagaaaatcatataattcagtgtaattata |
90889 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold1528 (Bit Score: 35; Significance: 0.0000000002; HSPs: 1)
Name: scaffold1528
Description:
Target: scaffold1528; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 207 - 281
Target Start/End: Original strand, 1013 - 1087
Alignment:
Q |
207 |
acgacacagacaccgacacattgacaccgctaataatttgataaaatcatataattcagtgtgattataggtgtc |
281 |
Q |
|
|
||||||||||| | |||||| ||||||||||||||||||| ||||| | |||||||||||| | |||| ||||| |
|
|
T |
1013 |
acgacacagacgctgacacaccgacaccgctaataatttgaaaaaattacataattcagtgtaactatatgtgtc |
1087 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0123 (Bit Score: 35; Significance: 0.0000000002; HSPs: 1)
Name: scaffold0123
Description:
Target: scaffold0123; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 228 - 282
Target Start/End: Complemental strand, 44585 - 44531
Alignment:
Q |
228 |
tgacaccgctaataatttgataaaatcatataattcagtgtgattataggtgtcg |
282 |
Q |
|
|
|||||||||||| ||||||| ||||||| |||||||||||| |||||| |||||| |
|
|
T |
44585 |
tgacaccgctaaaaatttgagaaaatcacataattcagtgtaattatatgtgtcg |
44531 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0044 (Bit Score: 34; Significance: 0.0000000006; HSPs: 2)
Name: scaffold0044
Description:
Target: scaffold0044; HSP #1
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 286 - 331
Target Start/End: Original strand, 53258 - 53303
Alignment:
Q |
286 |
cacgtgtccgacaccgggacacgtctcgtccaagaagtgtccgtgc |
331 |
Q |
|
|
|||||||||||||||||||||||| | |||||||||||||||||| |
|
|
T |
53258 |
cacgtgtccgacaccgggacacgtttaatccaagaagtgtccgtgc |
53303 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0044; HSP #2
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 232 - 282
Target Start/End: Original strand, 53183 - 53233
Alignment:
Q |
232 |
accgctaataatttgataaaatcatataattcagtgtgattataggtgtcg |
282 |
Q |
|
|
||||| |||||||||| ||||||| |||||||||||| |||||| |||||| |
|
|
T |
53183 |
accgccaataatttgagaaaatcacataattcagtgtaattataagtgtcg |
53233 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0024 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0024
Description:
Target: scaffold0024; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 221 - 281
Target Start/End: Complemental strand, 68309 - 68249
Alignment:
Q |
221 |
gacacattgacaccgctaataatttgataaaatcatataattcagtgtgattataggtgtc |
281 |
Q |
|
|
|||||||| ||||| ||||||||||| |||||||||||||| ||| | |||||||||||| |
|
|
T |
68309 |
gacacattagcaccgttaataatttgagaaaatcatataatttagtataattataggtgtc |
68249 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0003 (Bit Score: 32; Significance: 0.000000009; HSPs: 2)
Name: scaffold0003
Description:
Target: scaffold0003; HSP #1
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 286 - 333
Target Start/End: Original strand, 241672 - 241719
Alignment:
Q |
286 |
cacgtgtccgacaccgggacacgtctcgtccaagaagtgtccgtgctt |
333 |
Q |
|
|
||||||||||||||||||||||| || ||| |||||||||||||||| |
|
|
T |
241672 |
cacgtgtccgacaccgggacacgcctaatccgagaagtgtccgtgctt |
241719 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0003; HSP #2
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 186 - 274
Target Start/End: Original strand, 241550 - 241639
Alignment:
Q |
186 |
ctatgaagcacggagac-ggccacgacacagacaccgacacattgacaccgctaataatttgataaaatcatataattcagtgtgattat |
274 |
Q |
|
|
|||||||||||||| || || |||||||| ||||| ||||| ||||| |||||||||||| ||||||| |||||| ||||| ||||| |
|
|
T |
241550 |
ctatgaagcacggacaccggacacgacacggacactgacacgccgacacagctaataatttggaaaaatcacataatttagtgtaattat |
241639 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0085 (Bit Score: 31; Significance: 0.00000004; HSPs: 1)
Name: scaffold0085
Description:
Target: scaffold0085; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 209 - 283
Target Start/End: Original strand, 26373 - 26447
Alignment:
Q |
209 |
gacacagacaccgacacattgacaccgctaataatttgataaaatcatataattcagtgtgattataggtgtcgt |
283 |
Q |
|
|
|||||||||| ||||| | |||||| |||||||||||| ||||||| |||||||| ||| ||||| ||||||| |
|
|
T |
26373 |
gacacagacagtgacacgtcgacaccactaataatttgagaaaatcacataattcaatgtcgttatatgtgtcgt |
26447 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0050 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0050
Description:
Target: scaffold0050; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 190 - 282
Target Start/End: Original strand, 70238 - 70331
Alignment:
Q |
190 |
gaagcacggagacggccacga-cacagacaccgacacattgacaccgctaataatttgataaaatcatataattcagtgtgattataggtgtcg |
282 |
Q |
|
|
|||||||||| |||| ||| | ||||||||| |||| | ||||| | ||||||||||| ||||| | |||||||||||| |||||| |||||| |
|
|
T |
70238 |
gaagcacggatacggacacaaacacagacacagacatgtcgacacagttaataatttgaaaaaataacataattcagtgtaattataagtgtcg |
70331 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0223 (Bit Score: 29; Significance: 0.0000006; HSPs: 1)
Name: scaffold0223
Description:
Target: scaffold0223; HSP #1
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 229 - 273
Target Start/End: Original strand, 20172 - 20216
Alignment:
Q |
229 |
gacaccgctaataatttgataaaatcatataattcagtgtgatta |
273 |
Q |
|
|
||||| ||||||||||||| ||||||| |||||||||||| |||| |
|
|
T |
20172 |
gacacagctaataatttgaaaaaatcacataattcagtgtaatta |
20216 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0103 (Bit Score: 29; Significance: 0.0000006; HSPs: 1)
Name: scaffold0103
Description:
Target: scaffold0103; HSP #1
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 229 - 273
Target Start/End: Original strand, 51811 - 51855
Alignment:
Q |
229 |
gacaccgctaataatttgataaaatcatataattcagtgtgatta |
273 |
Q |
|
|
||||| ||||||||||||| ||||||| |||||||||||| |||| |
|
|
T |
51811 |
gacacagctaataatttgaaaaaatcacataattcagtgtaatta |
51855 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0053 (Bit Score: 29; Significance: 0.0000006; HSPs: 1)
Name: scaffold0053
Description:
Target: scaffold0053; HSP #1
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 206 - 282
Target Start/End: Original strand, 8775 - 8851
Alignment:
Q |
206 |
cacgacacagacaccgacacattgacaccgctaataatttgataaaatcatataattcagtgtgattataggtgtcg |
282 |
Q |
|
|
|||||||| ||||| ||||| ||||| ||||||||||||| |||||||||| ||| ||||| |||| | |||||| |
|
|
T |
8775 |
cacgacacggacactgacacgccgacacagctaataatttgaaaaaatcatattatttagtgtaattacaagtgtcg |
8851 |
T |
|
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0004 (Bit Score: 29; Significance: 0.0000006; HSPs: 1)
Name: scaffold0004
Description:
Target: scaffold0004; HSP #1
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 229 - 273
Target Start/End: Original strand, 92807 - 92851
Alignment:
Q |
229 |
gacaccgctaataatttgataaaatcatataattcagtgtgatta |
273 |
Q |
|
|
||||||||||||||||||| ||||| | |||||||||||| |||| |
|
|
T |
92807 |
gacaccgctaataatttgagaaaattacataattcagtgtaatta |
92851 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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