View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
Legend |
| Query |
| Query hiting target |
| Query hiting target's complemental strand |
| Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: 108_6_25 (Length: 652)
Name: 108_6_25
Description: Pascalseqs
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
[»] 108_6_25 |
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Alignment Details
Target: chr1 (Bit Score: 267; Significance: 1e-149; HSPs: 6)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 267; E-Value: 1e-149
Query Start/End: Original strand, 1 - 287
Target Start/End: Original strand, 4678569 - 4678854
Alignment:
Q |
1 |
aaaatcaagggtggtgtctttgaagtaaaagccactgctggaaacacccacctaggtggagaggactttgataacagaatggtgaactactttgtagagg |
100 |
Q |
|
|
||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| |
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|
T |
4678569 |
aaaatcaagggtggtgtctttgaagtaaaagccactgctggaaacactcacctaggtggagaggactttgataacagaatggtgaactactttgtagagg |
4678668 |
T |
|
Q |
101 |
agttcaaaaagaagaataatgtggacattagtaagaacgcaaagcccttatggaggttgagaactgcctgcgagagggcaaagaggacactctctttcgc |
200 |
Q |
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|
||||||||||||||||||||||||||||||||||||||||||| |||||| ||||||||||||||||||||||||||||||||||||||||||||||||| |
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|
T |
4678669 |
agttcaaaaagaagaataatgtggacattagtaagaacgcaaaacccttaaggaggttgagaactgcctgcgagagggcaaagaggacactctctttcgc |
4678768 |
T |
|
Q |
201 |
ctttgtcaccactgttgaggtagattctttatttcagggaatagacttttcttcatctattactcgtgccaagtttgaggaaattaa |
287 |
Q |
|
|
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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|
T |
4678769 |
ctttgtcaccactgttga-gtagattctttatttcagggaatagacttttcttcatctattactcgtgccaagtttgaggaaattaa |
4678854 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #2
Raw Score: 177; E-Value: 4e-95
Query Start/End: Original strand, 302 - 566
Target Start/End: Original strand, 4678131 - 4678392
Alignment:
Q |
302 |
gcagatgctaagaggttaattggtaggaggtatagtgattctgttgttcaaaaagacatcatgttgtggccnttcagggncatcnctggtgagaatgata |
401 |
Q |
|
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || |||| |||| ||||||||||||||| |
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|
T |
4678131 |
gcagatgctaagaggttaattggtaggaggtatagtgattctgttgttcaaaaagacatcatgttgtggccatttagggtcatcactggtgagaatgata |
4678230 |
T |
|
Q |
402 |
aaccgatgattagtgttaagtacaagggtcaagagaagccagttagtgctgacgaaatatcatccnataatccttaccaagatgagagaagttgctgaaa |
501 |
Q |
|
|
||||||||||||||||||||||||||||||||||||||| |||||||| ||| |||||||||| | || |||||||| ||||||||||||||||| |||| |
|
|
T |
4678231 |
aaccgatgattagtgttaagtacaagggtcaagagaagcaagttagtgttgaggaaatatcat-cgatgatccttacaaagatgagagaagttgccgaaa |
4678329 |
T |
|
Q |
502 |
cntatctaacttccctctgngaagaatgcccttgttactggtgcctgcanacttcnatgattctc |
566 |
Q |
|
|
| |||||||||| | |||| |||||||| | |||||||| ||||||||| ||||| ||||||||| |
|
|
T |
4678330 |
catatctaactt-cgtctgtgaagaatgtcgttgttact-gtgcctgcatacttcaatgattctc |
4678392 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #3
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 40 - 284
Target Start/End: Complemental strand, 15595152 - 15594908
Alignment:
Q |
40 |
ggaaacacccacctaggtggagaggactttgataacagaatggtgaactactttgtagaggagttcaaaaagaagaataatgtggacattagtaagaacg |
139 |
Q |
|
|
|||||||| ||||| || |||||||||||||||||||||||||| |||||||||| |||| ||||| | |||||| || ||||| |||| | |||| |
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|
T |
15595152 |
ggaaacactcaccttggaggagaggactttgataacagaatggtcaactactttgcgcaggaattcaagacgaagaacaaagtggatattactgggaacc |
15595053 |
T |
|
Q |
140 |
caaagcccttatggaggttgagaactgcctgcgagagggcaaagaggacactctctttcgcctttgtcaccactgttgaggtagattctttatttcaggg |
239 |
Q |
|
|
||| | |||| |||| ||||||||||| ||||| |||||||| ||| ||||||||| | |||||| || |||||||||||| ||||||| | || |
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|
T |
15595052 |
caagggccttgaggagattgagaactgcgtgcgaaagggcaaaaagggtactctcttttactactgtcactaccattgaggtagattgtttatttaacgg |
15594953 |
T |
|
Q |
240 |
aatagacttttcttcatctattactcgtgccaagtttgaggaaat |
284 |
Q |
|
|
|| ||||| | |||||| |||||||| |||||||||| ||||| |
|
|
T |
15594952 |
tattgacttcttttcatcggttactcgttccaagtttgaagaaat |
15594908 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #4
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 15 - 284
Target Start/End: Original strand, 34466818 - 34467079
Alignment:
Q |
15 |
tgtctttgaagtaaaagccactgctggaaacacccacctaggtggagaggactttgataacagaatggtgaactactttgtagaggagttcaaaaagaag |
114 |
Q |
|
|
|||||||||||| || |||||| |||| ||||| ||||| || |||||||||||||||| ||||||| |||| |||||| | |||||||||| | |||| |
|
|
T |
34466818 |
tgtctttgaagttaaggccacttctggtaacactcacctcggacgagaggactttgataatagaatggcgaaccactttgcaaaggagttcaagaggaag |
34466917 |
T |
|
Q |
115 |
aataatgtggacattagtaagaacgcaaagcccttatggaggttgagaactgcctgcgagagggcaaagaggacactctctttcgcctttgtcaccactg |
214 |
Q |
|
|
||||| ||| |||||| ||| | | | || |||||||||||||||| ||||||| |||||||||||||||| |||||| | |||| |
|
|
T |
34466918 |
cataataaggatattagtggaaaccctagagctttgaggaggttgagaactgcgtgcgagaatgcaaagaggacactct--------tttgtcgctactg |
34467009 |
T |
|
Q |
215 |
ttgaggtagattctttatttcagggaatagacttttcttcatctattactcgtgccaagtttgaggaaat |
284 |
Q |
|
|
|||| |||||||||||| | ||| ||| ||||| ||| || || ||||||||||||||||||||||| |
|
|
T |
34467010 |
ttgaaatagattctttatatgaggtaattgacttccattcgtcaatcactcgtgccaagtttgaggaaat |
34467079 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #5
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 303 - 462
Target Start/End: Complemental strand, 15595631 - 15595474
Alignment:
Q |
303 |
cagatgctaagaggttaattggtaggaggtatagtgattctgtt-gttcaaaaagacatcatgttgtggccnttcagggncatcnctggtgagaatgata |
401 |
Q |
|
|
||||||||||||| ||||| |||||| || ||||||||||||| |||||||| || || | ||||||||| |||| || ||| ||||| |||||| | |
|
|
T |
15595631 |
cagatgctaagagattaatcagtaggaagtttagtgattctgtttgttcaaaatgatataaagttgtggccattcaaggtcat---tggtgtgaatgaca |
15595535 |
T |
|
Q |
402 |
aaccgatgattagtgttaagtacaagggtcaagagaagccagttagtgctgacgaaatatc |
462 |
Q |
|
|
|||| ||||||| |||||| |||||||||||||| |||| || ||||||| |||||||| |
|
|
T |
15595534 |
aacccatgattattgttaaatacaagggtcaagaaaagcgcttttgtgctgaggaaatatc |
15595474 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #6
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 307 - 352
Target Start/End: Original strand, 52549098 - 52549143
Alignment:
Q |
307 |
tgctaagaggttaattggtaggaggtatagtgattctgttgttcaa |
352 |
Q |
|
|
|||||||||||||||||||| || || ||||||| ||||||||||| |
|
|
T |
52549098 |
tgctaagaggttaattggtaagaagtttagtgatcctgttgttcaa |
52549143 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7 (Bit Score: 182; Significance: 5e-98; HSPs: 44)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 182; E-Value: 5e-98
Query Start/End: Original strand, 7 - 284
Target Start/End: Complemental strand, 8659514 - 8659237
Alignment:
Q |
7 |
aagggtggtgtctttgaagtaaaagccactgctggaaacacccacctaggtggagaggactttgataacagaatggtgaactactttgtagaggagttca |
106 |
Q |
|
|
||||||| |||||||||||||||||||||| |||||||||| ||||| || |||||||||||||||| |||||||||||||||||||||||||||||||| |
|
|
T |
8659514 |
aagggtgatgtctttgaagtaaaagccacttctggaaacactcaccttggaggagaggactttgatagcagaatggtgaactactttgtagaggagttca |
8659415 |
T |
|
Q |
107 |
aaaagaagaataatgtggacattagtaagaacgcaaagcccttatggaggttgagaactgcctgcgagagggcaaagaggacactctctttcgcctttgt |
206 |
Q |
|
|
||||||||||||| |||||||||||| ||| |||| ||||| ||||||||||||||||||| |||||||||||||||||||||||||| || ||||| |
|
|
T |
8659414 |
aaaagaagaataaagtggacattagtggtaacccaaaatccttaaggaggttgagaactgcctgtgagagggcaaagaggacactctcttttgcttttgt |
8659315 |
T |
|
Q |
207 |
caccactgttgaggtagattctttatttcagggaatagacttttcttcatctattactcgtgccaagtttgaggaaat |
284 |
Q |
|
|
||||||||||||||| |||||||||||||||||||||||||| | ||||| || |||||||||| |||||||||||| |
|
|
T |
8659314 |
caccactgttgaggtcgattctttatttcagggaatagacttctgttcattaatcactcgtgccaggtttgaggaaat |
8659237 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #2
Raw Score: 161; E-Value: 2e-85
Query Start/End: Original strand, 7 - 287
Target Start/End: Complemental strand, 8654601 - 8654321
Alignment:
Q |
7 |
aagggtggtgtctttgaagtaaaagccactgctggaaacacccacctaggtggagaggactttgataacagaatggtgaactactttgtagaggagttca |
106 |
Q |
|
|
||||||| ||||||||| ||||||||||||||||||||||| |||||||| ||||| ||||||||||||||||||||| ||||||||||||||||||||| |
|
|
T |
8654601 |
aagggtgatgtctttgacgtaaaagccactgctggaaacacgcacctagggggagaagactttgataacagaatggtgtactactttgtagaggagttca |
8654502 |
T |
|
Q |
107 |
aaaagaagaataatgtggacattagtaagaacgcaaagcccttatggaggttgagaactgcctgcgagagggcaaagaggacactctctttcgcctttgt |
206 |
Q |
|
|
||||||||||||| ||||| ||||| ||| |||| ||||| ||||||||||||||||||| ||||||||||| |||| ||||||||| | ||||| |
|
|
T |
8654501 |
aaaagaagaataaagtggaaattagcggtaacccaaaatccttaaggaggttgagaactgcctgtgagagggcaaaaaggatactctcttttacttttgt |
8654402 |
T |
|
Q |
207 |
caccactgttgaggtagattctttatttcagggaatagacttttcttcatctattactcgtgccaagtttgaggaaattaa |
287 |
Q |
|
|
||||||||||||||||||| |||||||| |||||| |||||||||||||| || |||||||| || |||||||||||||| |
|
|
T |
8654401 |
caccactgttgaggtagatgctttatttatgggaatcgacttttcttcatcaatcactcgtgctaaatttgaggaaattaa |
8654321 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #3
Raw Score: 149; E-Value: 2e-78
Query Start/End: Original strand, 7 - 287
Target Start/End: Complemental strand, 8667570 - 8667290
Alignment:
Q |
7 |
aagggtggtgtctttgaagtaaaagccactgctggaaacacccacctaggtggagaggactttgataacagaatggtgaactactttgtagaggagttca |
106 |
Q |
|
|
||||||| |||||||||||| ||||||||||| |||||||| ||||| || || |||||||| |||||||||||||||||||| ||||| |||||||| | |
|
|
T |
8667570 |
aagggtgatgtctttgaagtgaaagccactgcaggaaacactcaccttgggggcgaggacttcgataacagaatggtgaactattttgttgaggagttaa |
8667471 |
T |
|
Q |
107 |
aaaagaagaataatgtggacattagtaagaacgcaaagcccttatggaggttgagaactgcctgcgagagggcaaagaggacactctctttcgcctttgt |
206 |
Q |
|
|
||||||||||||| |||||||| ||| ||||| |||| ||||| ||||||||||||||||||| ||||||||||| |||| ||||||||| || ||||| |
|
|
T |
8667470 |
aaaagaagaataaagtggacatcagtcagaacccaaaatccttaaggaggttgagaactgcctgtgagagggcaaaaaggatactctcttttgcttttgt |
8667371 |
T |
|
Q |
207 |
caccactgttgaggtagattctttatttcagggaatagacttttcttcatctattactcgtgccaagtttgaggaaattaa |
287 |
Q |
|
|
|||||||||||||||||| |||||||| |||||| ||||||| |||||| ||||||||||| || ||||||||| |||| |
|
|
T |
8667370 |
taccactgttgaggtagatgctttatttacgggaatcgacttttgttcatcaattactcgtgctaaatttgaggaacttaa |
8667290 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #4
Raw Score: 145; E-Value: 5e-76
Query Start/End: Original strand, 7 - 287
Target Start/End: Original strand, 10494391 - 10494671
Alignment:
Q |
7 |
aagggtggtgtctttgaagtaaaagccactgctggaaacacccacctaggtggagaggactttgataacagaatggtgaactactttgtagaggagttca |
106 |
Q |
|
|
||||||| |||||||||||||||||||||||| || ||||| ||||| || ||||||||||| ||||||||||||||||| || ||||| |||||||||| |
|
|
T |
10494391 |
aagggtgatgtctttgaagtaaaagccactgcaggtaacactcaccttgggggagaggacttcgataacagaatggtgaattattttgttgaggagttca |
10494490 |
T |
|
Q |
107 |
aaaagaagaataatgtggacattagtaagaacgcaaagcccttatggaggttgagaactgcctgcgagagggcaaagaggacactctctttcgcctttgt |
206 |
Q |
|
|
||||||||||||| |||||||| ||| ||| |||| ||||| ||||||||||||||||||| ||||||||||| |||| ||||||||| | ||||| |
|
|
T |
10494491 |
aaaagaagaataacgtggacatcagtgggaatccaaaatccttaaggaggttgagaactgcctgtgagagggcaaaaaggatactctctttttcttttgt |
10494590 |
T |
|
Q |
207 |
caccactgttgaggtagattctttatttcagggaatagacttttcttcatctattactcgtgccaagtttgaggaaattaa |
287 |
Q |
|
|
|||||| |||||||| ||| |||||||| |||||| |||||||||||||| || ||||||||||| |||||||||||||| |
|
|
T |
10494591 |
caccaccgttgaggtcgatgctttatttatgggaatcgacttttcttcatcaatcactcgtgccaaatttgaggaaattaa |
10494671 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #5
Raw Score: 144; E-Value: 2e-75
Query Start/End: Original strand, 4 - 287
Target Start/End: Complemental strand, 1301614 - 1301331
Alignment:
Q |
4 |
atcaagggtggtgtctttgaagtaaaagccactgctggaaacacccacctaggtggagaggactttgataacagaatggtgaactactttgtagaggagt |
103 |
Q |
|
|
|||||||| | ||||||||||||||||||||||| |||||| || ||||| || ||||||||||||||||| |||||||||| ||||||||||||||||| |
|
|
T |
1301614 |
atcaagggcgatgtctttgaagtaaaagccactggtggaaatactcaccttggaggagaggactttgataatagaatggtgagctactttgtagaggagt |
1301515 |
T |
|
Q |
104 |
tcaaaaagaagaataatgtggacattagtaagaacgcaaagcccttatggaggttgagaactgcctgcgagagggcaaagaggacactctctttcgcctt |
203 |
Q |
|
|
||| |||||||||||| |||||||||||| ||| || ||||| |||||||||||| ||| || ||||||||||| |||||||||||||| || || |
|
|
T |
1301514 |
tcagaaagaagaataaagtggacattagtggtaaccagaaatccttaaggaggttgagaattgcgtgtgagagggcaaaaaggacactctcttttgcttt |
1301415 |
T |
|
Q |
204 |
tgtcaccactgttgaggtagattctttatttcagggaatagacttttcttcatctattactcgtgccaagtttgaggaaattaa |
287 |
Q |
|
|
|||||||| |||||||| |||||||||||||||||||| ||||| | ||||| || |||||||||||||||||||||||||| |
|
|
T |
1301414 |
agtcaccaccgttgaggtcgattctttatttcagggaatcgacttctgttcattaatcactcgtgccaagtttgaggaaattaa |
1301331 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #6
Raw Score: 135; E-Value: 5e-70
Query Start/End: Original strand, 9 - 287
Target Start/End: Original strand, 13333475 - 13333753
Alignment:
Q |
9 |
gggtggtgtctttgaagtaaaagccactgctggaaacacccacctaggtggagaggactttgataacagaatggtgaactactttgtagaggagttcaaa |
108 |
Q |
|
|
||||| ||||||||||||||||||||| || |||||||| ||||| || ||||| ||||| |||||||||||||||||||| ||||| |||||||||||| |
|
|
T |
13333475 |
gggtgatgtctttgaagtaaaagccaccgcaggaaacactcaccttgggggagaagacttcgataacagaatggtgaactattttgttgaggagttcaaa |
13333574 |
T |
|
Q |
109 |
aagaagaataatgtggacattagtaagaacgcaaagcccttatggaggttgagaactgcctgcgagagggcaaagaggacactctctttcgcctttgtca |
208 |
Q |
|
|
||||||||||| || || || ||| |||| |||| ||||| ||||||||||||||||||| ||||||| ||| |||| |||||| || | ||||||| |
|
|
T |
13333575 |
aagaagaataacgtcgatatcagtgggaacccaaaatccttaaggaggttgagaactgcctgtgagagggaaaaaaggatactctccttttcttttgtca |
13333674 |
T |
|
Q |
209 |
ccactgttgaggtagattctttatttcagggaatagacttttcttcatctattactcgtgccaagtttgaggaaattaa |
287 |
Q |
|
|
|||||||||| |||||| |||||||| |||||| |||||||||||||| || ||||||||||| |||||||||||||| |
|
|
T |
13333675 |
ccactgttgaagtagatgctttatttatgggaatcgacttttcttcatcaatcactcgtgccaaatttgaggaaattaa |
13333753 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #7
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 304 - 465
Target Start/End: Complemental strand, 8655043 - 8654882
Alignment:
Q |
304 |
agatgctaagaggttaattggtaggaggtatagtgattctgttgttcaaaaagacatcatgttgtggccnttcagggncatcnctggtgagaatgataaa |
403 |
Q |
|
|
|||||||||||||||||||||||||| |||||||||| || |||||||||| || |||||||||||||| |||| || | |||||| ||||| ||| |
|
|
T |
8655043 |
agatgctaagaggttaattggtaggaagtatagtgatcctattgttcaaaaggatatcatgttgtggccattcatggttacttctggtgttaatgacaaa |
8654944 |
T |
|
Q |
404 |
ccgatgattagtgttaagtacaagggtcaagagaagccagttagtgctgacgaaatatcatc |
465 |
Q |
|
|
|| ||||||| |||||||||||| ||||||||||||| | || ||||||| ||||||||||| |
|
|
T |
8654943 |
cccatgattactgttaagtacaaaggtcaagagaagcaattttgtgctgaggaaatatcatc |
8654882 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #8
Raw Score: 73; E-Value: 5e-33
Query Start/End: Original strand, 303 - 440
Target Start/End: Complemental strand, 1302058 - 1301921
Alignment:
Q |
303 |
cagatgctaagaggttaattggtaggaggtatagtgattctgttgttcaaaaagacatcatgttgtggccnttcagggncatcnctggtgagaatgataa |
402 |
Q |
|
|
||||||||||||| ||||||||||||| || ||||||||| ||||||||||||||||| ||||||||||| |||| || |||| | |||| |||||| || |
|
|
T |
1302058 |
cagatgctaagagattaattggtaggaagtttagtgattcagttgttcaaaaagacatgatgttgtggccattcaaggtcatcgccggtgtgaatgacaa |
1301959 |
T |
|
Q |
403 |
accgatgattagtgttaagtacaagggtcaagagaagc |
440 |
Q |
|
|
||| ||||| |||||||||||||||||| ||||||| |
|
|
T |
1301958 |
acccgtgattgttgttaagtacaagggtcaggagaagc |
1301921 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #9
Raw Score: 73; E-Value: 5e-33
Query Start/End: Original strand, 40 - 284
Target Start/End: Complemental strand, 3147382 - 3147138
Alignment:
Q |
40 |
ggaaacacccacctaggtggagaggactttgataacagaatggtgaactactttgtagaggagttcaaaaagaagaataatgtggacattagtaagaacg |
139 |
Q |
|
|
|||||||||||||| || ||||||||||||||||| || |||||||||||||||| | |||||| || |||||||| || || ||||||||| ||||| |
|
|
T |
3147382 |
ggaaacacccaccttgggggagaggactttgataataggatggtgaactactttgcacgggagtttaagaagaagaacaaggtagacattagtgagaact |
3147283 |
T |
|
Q |
140 |
caaagcccttatggaggttgagaactgcctgcgagagggcaaagaggacactctctttcgcctttgtcaccactgttgaggtagattctttatttcaggg |
239 |
Q |
|
|
||| ||||| ||||||||| ||| || || || || ||||| | | ||| ||||| || | ||||||| ||||| ||||||||||||||||||| |
|
|
T |
3147282 |
caagagccttaaggaggttgaaaacggcgtgtgaaagagcaaaacgaatactatcttttgctgtcatcaccaccattgagatagattctttatttcaggg |
3147183 |
T |
|
Q |
240 |
aatagacttttcttcatctattactcgtgccaagtttgaggaaat |
284 |
Q |
|
|
| | ||||| | |||||| || ||||||||||||||||||||||| |
|
|
T |
3147182 |
atttgacttattttcatcaatcactcgtgccaagtttgaggaaat |
3147138 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #10
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 303 - 566
Target Start/End: Complemental strand, 8659957 - 8659697
Alignment:
Q |
303 |
cagatgctaagaggttaattggtaggaggtatagtgattctgttgttcaaaaagacatcatgttgtggccnttcagggncatcnctggtgagaatgataa |
402 |
Q |
|
|
||||||| ||||| ||||||||||||| || ||||||||| ||||||||||||||||| ||||||||||| |||| || ||| |||||| ||| || || |
|
|
T |
8659957 |
cagatgcaaagagattaattggtaggaagtttagtgattcagttgttcaaaaagacatgatgttgtggccattcaaggttatcgctggtgtgaacgacaa |
8659858 |
T |
|
Q |
403 |
accgatgattagtgttaagtacaagggtcaagagaagccagttagtgctgacgaaatatcatccnataatccttaccaagatgagagaagttgctgaaac |
502 |
Q |
|
|
|| ||||||| |||| ||||||||||||| ||||||| || |||| || |||||||||| | || | ||||| || ||| |||||||||| || || |
|
|
T |
8659857 |
actcatgattaatgttcagtacaagggtcaggagaagcacttttgtgcggaggaaatatcat-ctatggtacttacaaaaatgcgagaagttgcagagac |
8659759 |
T |
|
Q |
503 |
ntatctaacttccctctgngaagaatgcccttgttactggtgcctgcanacttcnatgattctc |
566 |
Q |
|
|
||||||| || | ||| ||||||||| ||||||| ||||||||| | ||| ||||||||| |
|
|
T |
8659758 |
atatctaatgtcac-ctgtgaagaatgctgttgttac-agtgcctgcatagttcaatgattctc |
8659697 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #11
Raw Score: 66; E-Value: 8e-29
Query Start/End: Original strand, 39 - 284
Target Start/End: Complemental strand, 6789631 - 6789386
Alignment:
Q |
39 |
tggaaacacccacctaggtggagaggactttgataacagaatggtgaactactttgtagaggagttcaaaaagaagaataatgtggacattagtaagaac |
138 |
Q |
|
|
||||||||| ||||| || |||||||||||||||||| || |||| |||||||||| ||||||||| || | |||||| || ||||| |||| | ||| |
|
|
T |
6789631 |
tggaaacactcacctcggaggagaggactttgataaccgattggtaaactactttgcagaggagtttaagaggaagaacaaagtggatattactggaaac |
6789532 |
T |
|
Q |
139 |
gcaaagcccttatggaggttgagaactgcctgcgagagggcaaagaggacactctctttcgcctttgtcaccactgttgaggtagattctttatttcagg |
238 |
Q |
|
|
||| | ||||| | |||||||||||||| || || ||||| || ||| ||||||||| | | ||||| ||| |||||||||| ||||||||||||| |
|
|
T |
6789531 |
tcaagggccttaagaaggttgagaactgcgtgtgaaagggccaaaagggtactctcttttgttgtcgtcactactattgaggtagactctttatttcagg |
6789432 |
T |
|
Q |
239 |
gaatagacttttcttcatctattactcgtgccaagtttgaggaaat |
284 |
Q |
|
|
| || ||||| |||||| ||||||| ||||||||||||||||| |
|
|
T |
6789431 |
gcatcgacttcatttcatcacttactcgggccaagtttgaggaaat |
6789386 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #12
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 16 - 284
Target Start/End: Complemental strand, 17260383 - 17260115
Alignment:
Q |
16 |
gtctttgaagtaaaagccactgctggaaacacccacctaggtggagaggactttgataacagaatggtgaactactttgtagaggagttcaaaaagaaga |
115 |
Q |
|
|
||||| ||||| || ||||| | |||| |||| || || || || |||||||||||||| ||||||||| |||| |||||||||||| |||||| | || |
|
|
T |
17260383 |
gtcttcgaagttaaggccaccggtggagacactcatcttgggggtgaggactttgataatagaatggtgtactattttgtagaggagatcaaaagaacga |
17260284 |
T |
|
Q |
116 |
ataatgtggacattagtaagaacgcaaagcccttatggaggttgagaactgcctgcgagagggcaaagaggacactctctttcgcctttgtcaccactgt |
215 |
Q |
|
|
| || ||||||||| | |||| |||| ||||| |||||||||||||||| || || | ||||| |||||||| ||||| |||| ||| |||| ||| |
|
|
T |
17260283 |
aaaaattggacattattgggaacccaaaagccttaaggaggttgagaactgcatgtgaaaaagcaaaaaggacactttcttttgcctctgtgaccaatgt |
17260184 |
T |
|
Q |
216 |
tgaggtagattctttatttcagggaatagacttttcttcatctattactcgtgccaagtttgaggaaat |
284 |
Q |
|
|
||||||||| |||||||| |||| | | |||||||| || || ||||||||||||||||| ||||| |
|
|
T |
17260183 |
tgaggtagacgctttatttaagggtgttaatttttcttcgtcaatcactcgtgccaagtttgaagaaat |
17260115 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #13
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 16 - 191
Target Start/End: Complemental strand, 8545775 - 8545600
Alignment:
Q |
16 |
gtctttgaagtaaaagccactgctggaaacacccacctaggtggagaggactttgataacagaatggtgaactactttgtagaggagttcaaaaagaaga |
115 |
Q |
|
|
|||||||| || || |||||||||||| |||| ||||||| || || ||||||||||||||||||||||| |||||||| |||||||||| | ||||| |
|
|
T |
8545775 |
gtctttgatgtcaaggccactgctggagacacttacctaggcggtgaagactttgataacagaatggtgaattactttgtgaaggagttcaagaggaaga |
8545676 |
T |
|
Q |
116 |
ataatgtggacattagtaagaacgcaaagcccttatggaggttgagaactgcctgcgagagggcaaagaggacact |
191 |
Q |
|
|
| |||| ||| |||||| |||| || | |||| ||||||||||||||||||| |||| |||||| |||||||| |
|
|
T |
8545675 |
acaatgaggatattagtcggaacccagaagccttgaggaggttgagaactgcctgtgagaaggcaaaaaggacact |
8545600 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #14
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 303 - 435
Target Start/End: Original strand, 8585280 - 8585412
Alignment:
Q |
303 |
cagatgctaagaggttaattggtaggaggtatagtgattctgttgttcaaaaagacatcatgttgtggccnttcagggncatcnctggtgagaatgataa |
402 |
Q |
|
|
||||||| ||||||||||||||||||| || ||||||| | ||||||||||| || || ||||||||||| |||| || ||| |||||| ||||| || |
|
|
T |
8585280 |
cagatgccaagaggttaattggtaggaagtttagtgatcccgttgttcaaaatgatataatgttgtggccattcaaggttatctctggtgttaatgacaa |
8585379 |
T |
|
Q |
403 |
accgatgattagtgttaagtacaagggtcaaga |
435 |
Q |
|
|
||| ||||||| ||||||||||||||||||||| |
|
|
T |
8585380 |
acctatgattactgttaagtacaagggtcaaga |
8585412 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #15
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 302 - 462
Target Start/End: Complemental strand, 8668014 - 8667854
Alignment:
Q |
302 |
gcagatgctaagaggttaattggtaggaggtatagtgattctgttgttcaaaaagacatcatgttgtggccnttcagggncatcnctggtgagaatgata |
401 |
Q |
|
|
|||||||||||||||||||||||||||| || |||||| | |||||||||| ||| || |||||||||| |||| || || |||||| ||||| | |
|
|
T |
8668014 |
gcagatgctaagaggttaattggtaggaagtttagtgaccccgttgttcaaagagatatattgttgtggccattcaaggttatttctggtgttaatgaca |
8667915 |
T |
|
Q |
402 |
aaccgatgattagtgttaagtacaagggtcaagagaagccagttagtgctgacgaaatatc |
462 |
Q |
|
|
|||| ||||||| |||||||||||||||||||||||||| || ||||||| |||||||| |
|
|
T |
8667914 |
aacctatgattactgttaagtacaagggtcaagagaagcacttttgtgctgaggaaatatc |
8667854 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #16
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 34 - 284
Target Start/End: Original strand, 27830919 - 27831169
Alignment:
Q |
34 |
actgctggaaacacccacctaggtggagaggactttgataacagaatggtgaactactttgtagaggagttcaaaaagaagaataatgtggacattagta |
133 |
Q |
|
|
|||||||||||||| ||||| |||||||||||||||||||| || ||||||||||| ||||| |||| |||||| |||||||| | |||||||||||| |
|
|
T |
27830919 |
actgctggaaacactcaccttggtggagaggactttgataataggatggtgaactattttgtggaggtgttcaagaagaagaaaagagtggacattagtg |
27831018 |
T |
|
Q |
134 |
agaacgcaaagcccttatggaggttgagaactgcctgcgagagggcaaagaggacactctctttcgcctttgtcaccactgttgaggtagattctttatt |
233 |
Q |
|
|
|||| ||| |||| ||||| ||||||| || |||| |||||| |||||||||||||| | ||| ||| ||| ||||| ||||| | ||||| |
|
|
T |
27831019 |
ggaacccaagagccttgaggaggctgagaacctaatgtgagaaggcaaaaaggacactctctttttctgttgacactactattgagatagatgccttatt |
27831118 |
T |
|
Q |
234 |
tcagggaatagacttttcttcatctattactcgtgccaagtttgaggaaat |
284 |
Q |
|
|
| |||| || ||||| | |||| || |||||||| |||||||||||||| |
|
|
T |
27831119 |
tgagggcattgacttcttttcaatgatcactcgtgcaaagtttgaggaaat |
27831169 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #17
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 28 - 278
Target Start/End: Complemental strand, 8647007 - 8646757
Alignment:
Q |
28 |
aaagccactgctggaaacacccacctaggtggagaggactttgataacagaatggtgaactactttgtagaggagttcaaaaagaagaataatgtggaca |
127 |
Q |
|
|
|||||||| ||||||||||| ||||| || |||||||||||||||| ||||||||| || |||||| | | || || || |||||||| || ||||||| |
|
|
T |
8647007 |
aaagccaccgctggaaacactcacctcggaggagaggactttgatagtagaatggtggaccactttgcacaagaatttaacaagaagaacaaggtggaca |
8646908 |
T |
|
Q |
128 |
ttagtaagaacgcaaagcccttatggaggttgagaactgcctgcgagagggcaaagaggacactctctttcgcctttgtcaccactgttgaggtagattc |
227 |
Q |
|
|
||| | ||| ||| ||||| ||||||||||||| || |||||||| ||||| |||||||| ||||| || | | |||||| |||| ||||||| |
|
|
T |
8646907 |
ttactggaaactcaagagccttaaggaggttgagaacggcatgcgagagagcaaaaaggacactatcttttgcttcttgcaccaccattgaattagattc |
8646808 |
T |
|
Q |
228 |
tttatttcagggaatagacttttcttcatctattactcgtgccaagtttga |
278 |
Q |
|
|
||||||| | || || |||||| |||||| || ||||||||||| ||||| |
|
|
T |
8646807 |
tttatttaatggcattgactttatttcatcaatcactcgtgccaaatttga |
8646757 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #18
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 303 - 439
Target Start/End: Complemental strand, 8629126 - 8628990
Alignment:
Q |
303 |
cagatgctaagaggttaattggtaggaggtatagtgattctgttgttcaaaaagacatcatgttgtggccnttcagggncatcnctggtgagaatgataa |
402 |
Q |
|
|
||||||| ||||||||||||||||||| || ||||||| ||||||||||||| || |||||||| ||||| |||| || || ||||| ||||| || |
|
|
T |
8629126 |
cagatgccaagaggttaattggtaggaagtttagtgatcctgttgttcaaaaggatatcatgttctggccattcaaggttatttctggtcttaatgacaa |
8629027 |
T |
|
Q |
403 |
accgatgattagtgttaagtacaagggtcaagagaag |
439 |
Q |
|
|
|| |||||| ||||||||||||||||||||||||| |
|
|
T |
8629026 |
gcctatgattgctgttaagtacaagggtcaagagaag |
8628990 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #19
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 10 - 138
Target Start/End: Original strand, 8585726 - 8585854
Alignment:
Q |
10 |
ggtggtgtctttgaagtaaaagccactgctggaaacacccacctaggtggagaggactttgataacagaatggtgaactactttgtagaggagttcaaaa |
109 |
Q |
|
|
|||| |||||||||||| ||||| || |||||||| || ||||| || |||| ||||||||||||||||||| ||||||||||||| ||||| || || | |
|
|
T |
8585726 |
ggtgatgtctttgaagttaaagcaaccgctggaaatactcaccttgggggaggggactttgataacagaatgttgaactactttgttgaggaatttaaga |
8585825 |
T |
|
Q |
110 |
agaagaataatgtggacattagtaagaac |
138 |
Q |
|
|
||||| |||||||| |||| ||||||| |
|
|
T |
8585826 |
gaaagaacaatgtggatattactaagaac |
8585854 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #20
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 152 - 284
Target Start/End: Complemental strand, 17267945 - 17267813
Alignment:
Q |
152 |
ggaggttgagaactgcctgcgagagggcaaagaggacactctctttcgcctttgtcaccactgttgaggtagattctttatttcagggaatagacttttc |
251 |
Q |
|
|
|||||||||||||||| || || | ||||| |||||||| |||||||||| ||| |||| |||||||||||| |||||||| |||| | || ||||| |
|
|
T |
17267945 |
ggaggttgagaactgcatgtgaaaaagcaaaaaggacactttctttcgcctctgtgaccaatgttgaggtagacgctttatttaagggtgttgatttttc |
17267846 |
T |
|
Q |
252 |
ttcatctattactcgtgccaagtttgaggaaat |
284 |
Q |
|
|
||| || || ||||||||||||||||||||||| |
|
|
T |
17267845 |
ttcgtcaatcactcgtgccaagtttgaggaaat |
17267813 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #21
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 19 - 191
Target Start/End: Original strand, 29577701 - 29577873
Alignment:
Q |
19 |
tttgaagtaaaagccactgctggaaacacccacctaggtggagaggactttgataacagaatggtgaactactttgtagaggagttcaaaaagaagaata |
118 |
Q |
|
|
||||||||||| ||||||||||| | || |||||||| ||||||||||| ||||| | |||||||| | ||||||| | ||||| || | |||||| | |
|
|
T |
29577701 |
tttgaagtaaaggccactgctggtgatactcacctaggaggagaggacttcgataataaaatggtgagccactttgtgaatgagttgaagaggaagaaca |
29577800 |
T |
|
Q |
119 |
atgtggacattagtaagaacgcaaagcccttatggaggttgagaactgcctgcgagagggcaaagaggacact |
191 |
Q |
|
|
|||||||||||||| |||| |||| | ||| ||| | |||||||||| || ||||||||||||||| |||| |
|
|
T |
29577801 |
atgtggacattagtttgaacccaaaagctttaaggaagctgagaactgcttgtgagagggcaaagagggcact |
29577873 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #22
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 19 - 191
Target Start/End: Original strand, 29581870 - 29582042
Alignment:
Q |
19 |
tttgaagtaaaagccactgctggaaacacccacctaggtggagaggactttgataacagaatggtgaactactttgtagaggagttcaaaaagaagaata |
118 |
Q |
|
|
|||||||| || ||||||||||| | || |||||||| |||||||||||||||||| |||||||||| ||||||| | ||||| || | |||||| | |
|
|
T |
29581870 |
tttgaagtgaaggccactgctggcgatactcacctaggaggagaggactttgataaccgaatggtgaattactttgcgaatgagttgaagaggaagaaca |
29581969 |
T |
|
Q |
119 |
atgtggacattagtaagaacgcaaagcccttatggaggttgagaactgcctgcgagagggcaaagaggacact |
191 |
Q |
|
|
|| ||||||||||| |||| |||| | ||| ||| | ||||||| || || |||||||||||||||||||| |
|
|
T |
29581970 |
atttggacattagtgggaacccaaaagctttaaggaagctgagaacagcttgtgagagggcaaagaggacact |
29582042 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #23
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 10 - 81
Target Start/End: Complemental strand, 8628680 - 8628609
Alignment:
Q |
10 |
ggtggtgtctttgaagtaaaagccactgctggaaacacccacctaggtggagaggactttgataacagaatg |
81 |
Q |
|
|
|||| |||||||||||| ||||||||||||||||| || ||||| ||||||||||||||||||||||||||| |
|
|
T |
8628680 |
ggtgatgtctttgaagttaaagccactgctggaaatactcaccttggtggagaggactttgataacagaatg |
8628609 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #24
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 16 - 131
Target Start/End: Original strand, 8636369 - 8636484
Alignment:
Q |
16 |
gtctttgaagtaaaagccactgctggaaacacccacctaggtggagaggactttgataacagaatggtgaactactttgtagaggagttcaaaaagaaga |
115 |
Q |
|
|
||||||||||| ||||||||||| ||| |||| ||||| || ||||||||||||||||||||||||||| | || ||||||||||| |||| | ||||| |
|
|
T |
8636369 |
gtctttgaagttaaagccactgccggagacacacaccttggaggagaggactttgataacagaatggtggaatattttgtagaggaaatcaagaggaaga |
8636468 |
T |
|
Q |
116 |
ataatgtggacattag |
131 |
Q |
|
|
| || || |||||||| |
|
|
T |
8636469 |
acaaggtagacattag |
8636484 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #25
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 303 - 440
Target Start/End: Complemental strand, 6790106 - 6789969
Alignment:
Q |
303 |
cagatgctaagaggttaattggtaggaggtatagtgattctgttgttcaaaaagacatcatgttgtggccnttcagggncatcnctggtgagaatgataa |
402 |
Q |
|
|
||||||||||||||||||||||||||| || ||||||||||||||||||||| || || ||||| ||||| |||| || ||| |||| | ||||| || |
|
|
T |
6790106 |
cagatgctaagaggttaattggtaggaagtttagtgattctgttgttcaaaatgatatgatgttttggccattcaaggtcattgctggcgtcaatgacaa |
6790007 |
T |
|
Q |
403 |
accgatgattagtgttaagtacaagggtcaagagaagc |
440 |
Q |
|
|
|| |||||| |||| |||| |||||| | ||||||| |
|
|
T |
6790006 |
gcccatgattgttgttgagtataagggtgaggagaagc |
6789969 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #26
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 304 - 465
Target Start/End: Original strand, 10493949 - 10494110
Alignment:
Q |
304 |
agatgctaagaggttaattggtaggaggtatagtgattctgttgttcaaaaagacatcatgttgtggccnttcagggncatcnctggtgagaatgataaa |
403 |
Q |
|
|
||||||||||||||||||||| |||| || ||||||| | ||||||||||| || || ||||||||||| |||| || | | |||| ||||| ||| |
|
|
T |
10493949 |
agatgctaagaggttaattggcaggaagtttagtgatccggttgttcaaaacgatataatgttgtggccattcaaggttacttcaggtgtcaatgacaaa |
10494048 |
T |
|
Q |
404 |
ccgatgattagtgttaagtacaagggtcaagagaagccagttagtgctgacgaaatatcatc |
465 |
Q |
|
|
|| ||||||| | ||||||||||||||||||||||| || |||| || ||||||||||| |
|
|
T |
10494049 |
cctatgattaccgctaagtacaagggtcaagagaagcacttttgtgccgaggaaatatcatc |
10494110 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #27
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 303 - 563
Target Start/End: Complemental strand, 8647468 - 8647214
Alignment:
Q |
303 |
cagatgctaagaggttaattggtaggaggtatagtgattctgttgttcaaaaagacatcatgttgtggccnttcagggncatcnctggtgagaatgataa |
402 |
Q |
|
|
||||||||||||||||||| ||||||| || | ||||||||||||||| || || | | ||||||||| |||| || ||| ||| | |||||| || |
|
|
T |
8647468 |
cagatgctaagaggttaatcggtaggaagttttttgattctgttgttcagaatgataagaagttgtggccattcaaggtcat---tggggtgaatgacaa |
8647372 |
T |
|
Q |
403 |
accgatgattagtgttaagtacaagggtcaagagaagccagttagtgctgacgaaatatcatccnataatccttaccaagatgagagaagttgctgaaac |
502 |
Q |
|
|
||| ||||||| |||||| ||||||||| ||||||||| | ||||||| |||||||||| | || ||||| || |||||| |||| ||||| || | |
|
|
T |
8647371 |
acccatgattattgttaaatacaagggtgaagagaagcgttattgtgctgaggaaatatcat-cgatgatcctcacaaagatgcgagaggttgcagagaa |
8647273 |
T |
|
Q |
503 |
ntatctaacttccctctgngaagaatgcccttgttactggtgcctgcanacttcnatgatt |
563 |
Q |
|
|
||| ||| |||| ||| |||||||| |||||||| ||||||||| ||||| |||||| |
|
|
T |
8647272 |
atatttaatgtccc-ctgtaaagaatgcagttgttact-gtgcctgcatacttcaatgatt |
8647214 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #28
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 303 - 465
Target Start/End: Original strand, 13333030 - 13333192
Alignment:
Q |
303 |
cagatgctaagaggttaattggtaggaggtatagtgattctgttgttcaaaaagacatcatgttgtggccnttcagggncatcnctggtgagaatgataa |
402 |
Q |
|
|
||||||||||||||||||||||||||| || ||||||| | ||||||||||| || || ||||||||||| |||| || | |||||| || || || |
|
|
T |
13333030 |
cagatgctaagaggttaattggtaggaagtttagtgatccggttgttcaaaatgatataatgttgtggccattcaaggttacttctggtgtcaacgacaa |
13333129 |
T |
|
Q |
403 |
accgatgattagtgttaagtacaagggtcaagagaagccagttagtgctgacgaaatatcatc |
465 |
Q |
|
|
|| ||||||| | ||||| ||||||||||||||||| || |||| || ||||||||||| |
|
|
T |
13333130 |
gcctatgattaccgctaagtgcaagggtcaagagaagcacttttgtgccgaggaaatatcatc |
13333192 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #29
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 304 - 440
Target Start/End: Complemental strand, 3147865 - 3147729
Alignment:
Q |
304 |
agatgctaagaggttaattggtaggaggtatagtgattctgttgttcaaaaagacatcatgttgtggccnttcagggncatcnctggtgagaatgataaa |
403 |
Q |
|
|
|||||| ||||||||||||||||||| || | ||||||||||||||||||| || || ||||||||||| |||| || ||| || | |||||| ||| |
|
|
T |
3147865 |
agatgcaaagaggttaattggtaggaagtttggtgattctgttgttcaaaatgatatgatgttgtggccattcaaggtcatttgcggagtgaatgacaaa |
3147766 |
T |
|
Q |
404 |
ccgatgattagtgttaagtacaagggtcaagagaagc |
440 |
Q |
|
|
|| |||||| ||||||| |||||| || ||||||| |
|
|
T |
3147765 |
cccatgatttcggttaagtgcaagggacaggagaagc |
3147729 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #30
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 18 - 191
Target Start/End: Original strand, 7877761 - 7877934
Alignment:
Q |
18 |
ctttgaagtaaaagccactgctggaaacacccacctaggtggagaggactttgataacagaatggtgaactactttgtagaggagttcaaaaagaagaat |
117 |
Q |
|
|
|||||| |||| ||| ||||| ||| | || ||||||||||||||||||||||||||||||||| ||||| | || || |||||| || | ||||||| |
|
|
T |
7877761 |
ctttgatgtaatagctactgccggagatactcacctaggtggagaggactttgataacagaatgttgaaccatttagtgatggagtttaagaggaagaat |
7877860 |
T |
|
Q |
118 |
aatgtggacattagtaagaacgc-aaagcccttatggaggttgagaactgcctgcgagagggcaaagaggacact |
191 |
Q |
|
|
|| ||||||||| || ||| | | ||||||| |||||||||||||||| || |||||||| || |||||||| |
|
|
T |
7877861 |
aaagtggacattggtggaaacccgagggccctta-ggaggttgagaactgcatgtgagagggctaaaaggacact |
7877934 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #31
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 21 - 191
Target Start/End: Complemental strand, 8570448 - 8570278
Alignment:
Q |
21 |
tgaagtaaaagccactgctggaaacacccacctaggtggagaggactttgataacagaatggtgaactactttgtagaggagttcaaaaagaagaataat |
120 |
Q |
|
|
|||||| || |||||||||||| |||| ||||| || || || || ||||||||||||||| ||| ||||||| || ||||||| |||||||| || |
|
|
T |
8570448 |
tgaagtcaaggccactgctggagacactcacctgggaggtgaagattttgataacagaatgttgactcactttgtgaagaagttcaagaagaagaacaac |
8570349 |
T |
|
Q |
121 |
gtggacattagtaagaacgcaaagcccttatggaggttgagaactgcctgcgagagggcaaagaggacact |
191 |
Q |
|
|
| ||| ||||||| |||| |||| |||| ||||||| ||||| || || ||||||||||| |||||||| |
|
|
T |
8570348 |
gaggatattagtaggaacccaaaagccttgaggaggttaagaacagcttgtgagagggcaaaaaggacact |
8570278 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #32
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 31 - 191
Target Start/End: Original strand, 8382917 - 8383077
Alignment:
Q |
31 |
gccactgctggaaacacccacctaggtggagaggactttgataacagaatggtgaactactttgtagaggagttcaaaaagaagaataatgtggacatta |
130 |
Q |
|
|
|||||||| ||| |||| || ||||| || || ||||| ||||||||||| ||||| |||||||| || |||||||| | |||| ||||| |||||||| |
|
|
T |
8382917 |
gccactgccggagacactcatctaggaggtgaagacttagataacagaatcgtgaagtactttgttgacgagttcaagaggaagcataataaggacatta |
8383016 |
T |
|
Q |
131 |
gtaagaacgcaaa-gcccttatggaggttgagaactgcctgcgagagggcaaagaggacact |
191 |
Q |
|
|
|| |||| |||| || |||| | ||||| ||||| || |||||||||||||| |||||||| |
|
|
T |
8383017 |
gtgggaacccaaaggctctta-gaaggttaagaacggcttgcgagagggcaaaaaggacact |
8383077 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #33
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 18 - 83
Target Start/End: Complemental strand, 8590778 - 8590713
Alignment:
Q |
18 |
ctttgaagtaaaagccactgctggaaacacccacctaggtggagaggactttgataacagaatggt |
83 |
Q |
|
|
|||||| |||||||||||| | ||| | ||||||||||| |||||||||||||||||||||||||| |
|
|
T |
8590778 |
ctttgatgtaaaagccacttccggagatacccacctaggaggagaggactttgataacagaatggt |
8590713 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #34
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 316 - 462
Target Start/End: Original strand, 8671217 - 8671363
Alignment:
Q |
316 |
gttaattggtaggaggtatagtgattctgttgttcaaaaagacatcatgttgtggccnttcagggncatcnctggtgagaatgataaaccgatgattagt |
415 |
Q |
|
|
|||||||||||||| || ||||||| | |||||||||| ||| || |||||||||| |||| || || |||||| ||||| ||||| ||||||| | |
|
|
T |
8671217 |
gttaattggtaggaagtttagtgatccggttgttcaaagagatatattgttgtggccattcaaggttatttctggtgttaatgacaaacctatgattact |
8671316 |
T |
|
Q |
416 |
gttaagtacaagggtcaagagaagccagttagtgctgacgaaatatc |
462 |
Q |
|
|
|| |||||| | |||| |||||||| | || ||||||| |||||||| |
|
|
T |
8671317 |
gtcaagtacgaaggtctagagaagcaattttgtgctgaggaaatatc |
8671363 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #35
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 17 - 96
Target Start/End: Complemental strand, 8559474 - 8559395
Alignment:
Q |
17 |
tctttgaagtaaaagccactgctggaaacacccacctaggtggagaggactttgataacagaatggtgaactactttgta |
96 |
Q |
|
|
|||||||||| || |||||| | ||| |||| ||||| || ||||||||||||||||||||||||||||| |||||||| |
|
|
T |
8559474 |
tctttgaagtcaaggccacttccggagacacacacctcggaggagaggactttgataacagaatggtgaaacactttgta |
8559395 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #36
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 17 - 95
Target Start/End: Complemental strand, 8602115 - 8602037
Alignment:
Q |
17 |
tctttgaagtaaaagccactgctggaaacacccacctaggtggagaggactttgataacagaatggtgaactactttgt |
95 |
Q |
|
|
|||||||||| || |||||| | ||| |||| ||||| || |||||||||||||||||| ||||||||||| ||||||| |
|
|
T |
8602115 |
tctttgaagtcaaggccacttccggagacacacaccttggaggagaggactttgataaccgaatggtgaaccactttgt |
8602037 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #37
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 15 - 191
Target Start/End: Complemental strand, 8576469 - 8576293
Alignment:
Q |
15 |
tgtctttgaagtaaaagccactgctggaaacacccacctaggtggagaggactttgataacagaatggtgaactactttgtagaggagttcaaaaagaag |
114 |
Q |
|
|
|||||| ||||| || |||||||| ||| |||| |||||||| || | ||||||||||||| ||||||| | ||||||| ||||||||| || ||| |
|
|
T |
8576469 |
tgtcttcgaagtcaaggccactgccggagacactcacctaggaggccaagactttgataacataatggtggatcactttgttaaggagttcaggaacaag |
8576370 |
T |
|
Q |
115 |
aataatgtggacattagtaagaacgcaaagcccttatggaggttgagaactgcctgcgagagggcaaagaggacact |
191 |
Q |
|
|
| || | ||| |||||| |||| |||| ||||| |||||||||||||||| || || | |||||| |||||||| |
|
|
T |
8576369 |
tacaaagaggatattagtgagaattcaaaagccttaaggaggttgagaactgcttgtgaaaaggcaaaaaggacact |
8576293 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #38
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 303 - 377
Target Start/End: Complemental strand, 8582294 - 8582220
Alignment:
Q |
303 |
cagatgctaagaggttaattggtaggaggtatagtgattctgttgttcaaaaagacatcatgttgtggccnttca |
377 |
Q |
|
|
||||||| |||||||||||||| |||| ||||||||||| |||||||||| || |||| ||||||||| |||| |
|
|
T |
8582294 |
cagatgcaaagaggttaattggaaggaaatatagtgattccattgttcaaaaggatatcaagttgtggcccttca |
8582220 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #39
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 34 - 114
Target Start/End: Complemental strand, 8610041 - 8609961
Alignment:
Q |
34 |
actgctggaaacacccacctaggtggagaggactttgataacagaatggtgaactactttgtagaggagttcaaaaagaag |
114 |
Q |
|
|
||||||||| | || ||||| || ||||||||||||||| |||||||||| || ||||||| |||||||||||| |||| |
|
|
T |
8610041 |
actgctggagatactcaccttggaggagaggactttgatcacagaatggttaatcactttgtgaaggagttcaaaaggaag |
8609961 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #40
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 314 - 465
Target Start/End: Original strand, 8640133 - 8640282
Alignment:
Q |
314 |
aggttaattggtagga-ggtatagtgattctgttgttcaaaaagacatcatgttgtggccnttcagggncatcnctggtgagaatgataaaccgatgatt |
412 |
Q |
|
|
|||||||||||||||| ||| | || ||||||||||||||| || || | ||||||||| |||| || ||| ||| | |||||| ||||| | |||| |
|
|
T |
8640133 |
aggttaattggtaggaaggttttttgtttctgttgttcaaaatgatatgaagttgtggccattcaaggtcat---tggggtgaatgacaaacccacgatt |
8640229 |
T |
|
Q |
413 |
agtgttaagtacaagggtcaagagaagccagttagtgctgacgaaatatcatc |
465 |
Q |
|
|
| |||||| ||||||||| ||||||||| || |||| || ||||||||||| |
|
|
T |
8640230 |
attgttaaatacaagggtgaagagaagcgtttttgtgccgaggaaatatcatc |
8640282 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #41
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 303 - 377
Target Start/End: Complemental strand, 17268533 - 17268459
Alignment:
Q |
303 |
cagatgctaagaggttaattggtaggaggtatagtgattctgttgttcaaaaagacatcatgttgtggccnttca |
377 |
Q |
|
|
||||||||||||| |||||||||||| || ||||||| |||| || |||||||| || |||| |||||| |||| |
|
|
T |
17268533 |
cagatgctaagagactaattggtaggaagtttagtgatcctgtggtccaaaaagatataatgtcgtggccattca |
17268459 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #42
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 21 - 95
Target Start/End: Complemental strand, 8581837 - 8581763
Alignment:
Q |
21 |
tgaagtaaaagccactgctggaaacacccacctaggtggagaggactttgataacagaatggtgaactactttgt |
95 |
Q |
|
|
|||||| || |||||||||||| |||| ||||| || || || || |||||||||||||||||||| ||||||| |
|
|
T |
8581837 |
tgaagtcaaggccactgctggagacactcacctgggaggggaagattttgataacagaatggtgaatcactttgt |
8581763 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #43
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 17 - 95
Target Start/End: Complemental strand, 39985787 - 39985709
Alignment:
Q |
17 |
tctttgaagtaaaagccactgctggaaacacccacctaggtggagaggactttgataacagaatggtgaactactttgt |
95 |
Q |
|
|
||||||| || |||||||| || ||| ||||||| || || || ||||| ||||| ||||||||||||||| ||||||| |
|
|
T |
39985787 |
tctttgaggtgaaagccacagccggagacacccatcttggaggtgaggattttgacaacagaatggtgaaccactttgt |
39985709 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #44
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 304 - 357
Target Start/End: Original strand, 27830450 - 27830503
Alignment:
Q |
304 |
agatgctaagaggttaattggtaggaggtatagtgattctgttgttcaaaaaga |
357 |
Q |
|
|
|||||||||||||||||||||||||| || || ||| ||||||||||||||| |
|
|
T |
27830450 |
agatgctaagaggttaattggtaggaagttcagcgatgatgttgttcaaaaaga |
27830503 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2 (Bit Score: 169; Significance: 3e-90; HSPs: 16)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 169; E-Value: 3e-90
Query Start/End: Original strand, 7 - 287
Target Start/End: Original strand, 16657534 - 16657814
Alignment:
Q |
7 |
aagggtggtgtctttgaagtaaaagccactgctggaaacacccacctaggtggagaggactttgataacagaatggtgaactactttgtagaggagttca |
106 |
Q |
|
|
||||||| ||| ||||| |||||||||||||| |||||||| ||||| || |||||||||||||||||||||| |||||||||||||||||||||||| |
|
|
T |
16657534 |
aagggtgatgtttttgaggtaaaagccactgccggaaacactcaccttgggggagaggactttgataacagaacggtgaactactttgtagaggagtttc |
16657633 |
T |
|
Q |
107 |
aaaagaagaataatgtggacattagtaagaacgcaaagcccttatggaggttgagaactgcctgcgagagggcaaagaggacactctctttcgcctttgt |
206 |
Q |
|
|
||||||||||||| |||||||| ||| |||| ||| |||| |||||||||||||||| || |||||||||||||||||||||||||| || ||||| |
|
|
T |
16657634 |
aaaagaagaataaggtggacataagtgggaactcaagagccttgaggaggttgagaactgcatgtgagagggcaaagaggacactctcttttgcttttgt |
16657733 |
T |
|
Q |
207 |
caccactgttgaggtagattctttatttcagggaatagacttttcttcatctattactcgtgccaagtttgaggaaattaa |
287 |
Q |
|
|
|||||||||||||||||||||||||||||||||||| |||||||||||||| || || ||||||||||||||||||||||| |
|
|
T |
16657734 |
caccactgttgaggtagattctttatttcagggaattgacttttcttcatcaatcacccgtgccaagtttgaggaaattaa |
16657814 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #2
Raw Score: 83; E-Value: 5e-39
Query Start/End: Original strand, 31 - 281
Target Start/End: Complemental strand, 7542353 - 7542103
Alignment:
Q |
31 |
gccactgctggaaacacccacctaggtggagaggactttgataacagaatggtgaactactttgtagaggagttcaaaaagaagaataatgtggacatta |
130 |
Q |
|
|
||||||||||| ||||| ||||| |||||||| ||||||||||| ||||||| ||||||||||||| | |||||||| | ||||| || |||||||||| |
|
|
T |
7542353 |
gccactgctggcaacactcaccttggtggagaagactttgataatagaatggcgaactactttgtacaagagttcaagagaaagaacaaagtggacatta |
7542254 |
T |
|
Q |
131 |
gtaagaacgcaaagcccttatggaggttgagaactgcctgcgagagggcaaagaggacactctctttcgcctttgtcaccactgttgaggtagattcttt |
230 |
Q |
|
|
|| ||| |||| |||| |||||||||||||||| || ||||||||||| || |||| |||||| |||| ||||| |||||||||||||||| |
|
|
T |
7542253 |
gtgggaatccaaaagccttgaggaggttgagaactgcttgtgagagggcaaaaagatcactttctttccttgttgttgccactattgaggtagattcttt |
7542154 |
T |
|
Q |
231 |
atttcagggaatagacttttcttcatctattactcgtgccaagtttgagga |
281 |
Q |
|
|
|||||| || || |||||||||||||| || | | | |||||||||||||| |
|
|
T |
7542153 |
atttcaaggcattgacttttcttcatcgatcaatagggccaagtttgagga |
7542103 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #3
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 34 - 284
Target Start/End: Complemental strand, 14703532 - 14703282
Alignment:
Q |
34 |
actgctggaaacacccacctaggtggagaggactttgataacagaatggtgaactactttgtagaggagttcaaaaagaagaataatgtggacattagta |
133 |
Q |
|
|
|||||||||||||| ||||| || ||||||||||| |||||||||||||||||||||||||| | |||||||| | || || | ||||||||||| |
|
|
T |
14703532 |
actgctggaaacactcacctcgggggagaggacttcgataacagaatggtgaactactttgttcaagagttcaagagaaaaaacagattggacattagtg |
14703433 |
T |
|
Q |
134 |
agaacgcaaagcccttatggaggttgagaactgcctgcgagagggcaaagaggacactctctttcgcctttgtcaccactgttgaggtagattctttatt |
233 |
Q |
|
|
|| |||| ||||| |||| |||||||| || |||||||||||||| || ||||| |||||| ||||| ||||| ||||||||||| ||||||| |
|
|
T |
14703432 |
gaaatccaaaagccttaaggagcttgagaaccgcttgcgagagggcaaaaagaacactttctttccaagttgtcgccactattgaggtagatgctttatt |
14703333 |
T |
|
Q |
234 |
tcagggaatagacttttcttcatctattactcgtgccaagtttgaggaaat |
284 |
Q |
|
|
||| | || |||||||||||||| || | | | ||||||||||| ||||| |
|
|
T |
14703332 |
tcaatgcattgacttttcttcatcgatcaatagggccaagtttgaagaaat |
14703282 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #4
Raw Score: 66; E-Value: 8e-29
Query Start/End: Original strand, 303 - 440
Target Start/End: Complemental strand, 43626004 - 43625870
Alignment:
Q |
303 |
cagatgctaagaggttaattggtaggaggtatagtgattctgttgttcaaaaagacatcatgttgtggccnttcagggncatcnctggtgagaatgataa |
402 |
Q |
|
|
||||||||||||||||||| ||||||| || ||||||||||||||||||||| || |||||||||||||| ||||||| ||| ||| | | |||| || |
|
|
T |
43626004 |
cagatgctaagaggttaatcggtaggaagtttagtgattctgttgttcaaaatgatatcatgttgtggccattcagggtcat---tggggtggatgacaa |
43625908 |
T |
|
Q |
403 |
accgatgattagtgttaagtacaagggtcaagagaagc |
440 |
Q |
|
|
||| ||||||| ||| || ||||||||||||||||||| |
|
|
T |
43625907 |
accaatgattattgtaaaatacaagggtcaagagaagc |
43625870 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #5
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 303 - 499
Target Start/End: Original strand, 16657091 - 16657286
Alignment:
Q |
303 |
cagatgctaagaggttaattggtaggaggtatagtgattctgttgttcaaaaagacatcatgttgtggccnttcagggncatcnctggtgagaatgataa |
402 |
Q |
|
|
|||||||||| |||||||| ||||||| || ||||||| ||||||||||||| || ||||| |||||||| |||| || ||| | || | |||||| || |
|
|
T |
16657091 |
cagatgctaaaaggttaatcggtaggaagtttagtgatcctgttgttcaaaatgatatcatcttgtggccattcaaggtcattgccggagtgaatgacaa |
16657190 |
T |
|
Q |
403 |
accgatgattagtgttaagtacaagggtcaagagaagccagttagtgctgacgaaatatcatccnataatccttaccaagatgagagaagttgctga |
499 |
Q |
|
|
||| ||||||| | || |||| ||||||||||||| | | || ||||||| |||||||||| | || |||||||| |||||| ||||||||||||| |
|
|
T |
16657191 |
accaatgattactcttcagtataagggtcaagagagccaattttgtgctgaggaaatatcat-ctatgatccttacaaagatgcgagaagttgctga |
16657286 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #6
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 28 - 284
Target Start/End: Complemental strand, 43625542 - 43625286
Alignment:
Q |
28 |
aaagccactgctggaaacacccacctaggtggagaggactttgataacagaatggtgaactactttgtagaggagttcaaaaagaagaataatgtggaca |
127 |
Q |
|
|
|||||||||||||||||||| ||||| || ||||||||||||||| | ||||||||||||||||||| ||| || || | |||||||| |||||||| | |
|
|
T |
43625542 |
aaagccactgctggaaacactcaccttggaggagaggactttgatgatagaatggtgaactactttgcagaagaatttgagaagaagaacaatgtggata |
43625443 |
T |
|
Q |
128 |
ttagtaagaacgcaaagcccttatggaggttgagaactgcctgcgagagggcaaagaggacactctctttcgcctttgtcaccactgttgaggtagattc |
227 |
Q |
|
|
||| | ||| ||| || || | ||||||||||| || |||||||| | ||| |||||||| ||||| || | ||| |||| ||||||||||||| |
|
|
T |
43625442 |
ttattggaaactcaagagccataagaaggttgagaacggcatgcgagagaggaaaaaggacactgtcttttgcttcgttcagcactattgaggtagattc |
43625343 |
T |
|
Q |
228 |
tttatttcagggaatagacttttcttcatctattactcgtgccaagtttgaggaaat |
284 |
Q |
|
|
|||||| | || || ||||| | |||||| || ||||||||||| ||||| ||||| |
|
|
T |
43625342 |
tttattccgtggtattgacttcttttcatcaatcactcgtgccaaatttgatgaaat |
43625286 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #7
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 10 - 95
Target Start/End: Original strand, 16662012 - 16662097
Alignment:
Q |
10 |
ggtggtgtctttgaagtaaaagccactgctggaaacacccacctaggtggagaggactttgataacagaatggtgaactactttgt |
95 |
Q |
|
|
|||| |||||||||||| ||||||||| |||||||||| ||||| || |||||||||||||||||||||||| ||||||||||||| |
|
|
T |
16662012 |
ggtgatgtctttgaagttaaagccacttctggaaacactcacctcgggggagaggactttgataacagaatgttgaactactttgt |
16662097 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #8
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 303 - 440
Target Start/End: Original strand, 16661566 - 16661703
Alignment:
Q |
303 |
cagatgctaagaggttaattggtaggaggtatagtgattctgttgttcaaaaagacatcatgttgtggccnttcagggncatcnctggtgagaatgataa |
402 |
Q |
|
|
||||||||||||||||||||||||||| | |||||| | |||||||||||||| || |||||||||| |||| || || |||||| ||||| || |
|
|
T |
16661566 |
cagatgctaagaggttaattggtaggaaatttagtgaccccgttgttcaaaaagatatactgttgtggccgttcaaggttattgctggtgttaatgacaa |
16661665 |
T |
|
Q |
403 |
accgatgattagtgttaagtacaagggtcaagagaagc |
440 |
Q |
|
|
||| | |||||||||||||||||||||||| ||||||| |
|
|
T |
16661666 |
acctacgattagtgttaagtacaagggtcaggagaagc |
16661703 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #9
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 31 - 282
Target Start/End: Original strand, 12245447 - 12245698
Alignment:
Q |
31 |
gccactgctggaaacacccacctaggtggagaggactttgataacagaatggtgaactactttgtagaggagttcaaaaagaagaataatgtggacatta |
130 |
Q |
|
|
||||||||||||||||| ||||| || |||||||| |||||||| |||||||| |||||||||| | |||||||||| | ||||| || |||| |||| |
|
|
T |
12245447 |
gccactgctggaaacactcaccttggaggagaggattttgataatagaatggtaaactactttgcacaggagttcaagagaaagaacaaattggatatta |
12245546 |
T |
|
Q |
131 |
gtaagaacgcaaagcccttatggaggttgagaactgcctgcgagagggcaaagaggacactctctttcgcctttgtcaccactgttgaggtagattcttt |
230 |
Q |
|
|
|| | |||| |||| |||| ||||||||||| || ||||||||||| || | ||| || || |||| | ||| |||||||||||||||| |
|
|
T |
12245547 |
gtgcaagttcaaaagccttgaggagattgagaactgcttgtgagagggcaaaaagaatactttcgtttcttgttgttgcaactattgaggtagattcttt |
12245646 |
T |
|
Q |
231 |
atttcagggaatagacttttcttcatctattactcgtgccaagtttgaggaa |
282 |
Q |
|
|
|||||| || || || ||||||||||| || | ||| || |||||||||||| |
|
|
T |
12245647 |
atttcaaggcattgatttttcttcatccatcaatcgggcaaagtttgaggaa |
12245698 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #10
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 23 - 284
Target Start/End: Complemental strand, 12234824 - 12234563
Alignment:
Q |
23 |
aagtaaaagccactgctggaaacacccacctaggtggagaggactttgataacagaatggtgaactactttgtagaggagttcaaaaagaagaataatgt |
122 |
Q |
|
|
|||| |||||||| || |||||||| ||||| || |||||||||||||||||||||||||| |||||| ||| | |||||||| | ||||| || || |
|
|
T |
12234824 |
aagttaaagccacagccggaaacactcacctcgggggagaggactttgataacagaatggtaaactaccttgctcaagagttcaatagaaagaaaaaagt |
12234725 |
T |
|
Q |
123 |
ggacattagtaagaacgcaaagcccttatggaggttgagaactgcctgcgagagggcaaagaggacactctctttcgcctttgtcaccactgttgaggta |
222 |
Q |
|
|
|||||| ||| || |||| |||| ||||||| |||||||| || ||||||||||| || || | |||||| |||| | || |||||||| |
|
|
T |
12234724 |
ggacatgagtggaaatccaaaagccttgaggaggttaagaactgcttgtgagagggcaaaaagatcattgtctttccttgttgttgcaaccattgaggta |
12234625 |
T |
|
Q |
223 |
gattctttatttcagggaatagacttttcttcatctattactcgtgccaagtttgaggaaat |
284 |
Q |
|
|
|||||||||||| | || || || ||||||||||| || | | | ||||||||||||||||| |
|
|
T |
12234624 |
gattctttatttgaaggcattgatttttcttcatcgatcaatagggccaagtttgaggaaat |
12234563 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #11
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 303 - 440
Target Start/End: Complemental strand, 12235283 - 12235146
Alignment:
Q |
303 |
cagatgctaagaggttaattggtaggaggtatagtgattctgttgttcaaaaagacatcatgttgtggccnttcagggncatcnctggtgagaatgataa |
402 |
Q |
|
|
||||||||||||||||||||||||||| || ||||||| ||||||||| | || | ||||||||||| |||| || | |||||| ||||| || |
|
|
T |
12235283 |
cagatgctaagaggttaattggtaggaagtttagtgatcaagttgttcaagatgatgtgatgttgtggccattcaaggtcgctgctggtgtcaatgacaa |
12235184 |
T |
|
Q |
403 |
accgatgattagtgttaagtacaagggtcaagagaagc |
440 |
Q |
|
|
||| ||||||| ||| ||||||||||||| |||||||| |
|
|
T |
12235183 |
acccatgattattgtcaagtacaagggtcgagagaagc |
12235146 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #12
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 15 - 107
Target Start/End: Original strand, 12258606 - 12258698
Alignment:
Q |
15 |
tgtctttgaagtaaaagccactgctggaaacacccacctaggtggagaggactttgataacagaatggtgaactactttgtagaggagttcaa |
107 |
Q |
|
|
||||||| |||| || || || ||||||||||| ||||| || ||||||||||||||||| |||||||||| ||||||||||| |||||||| |
|
|
T |
12258606 |
tgtctttcaagttaaggctacagctggaaacacgcaccttggaggagaggactttgataatagaatggtgagttactttgtagaagagttcaa |
12258698 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #13
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 304 - 438
Target Start/End: Complemental strand, 7542819 - 7542685
Alignment:
Q |
304 |
agatgctaagaggttaattggtaggaggtatagtgattctgttgttcaaaaagacatcatgttgtggccnttcagggncatcnctggtgagaatgataaa |
403 |
Q |
|
|
|||||||||||||||||||||||||| || ||||||| ||||||||||| | || || |||| ||||| |||| || | | ||||| ||||| | | |
|
|
T |
7542819 |
agatgctaagaggttaattggtaggaagtttagtgatcctgttgttcaagatgatatactgttatggccattcaaggtgactgcgggtgacaatgacaga |
7542720 |
T |
|
Q |
404 |
ccgatgattagtgttaagtacaagggtcaagagaa |
438 |
Q |
|
|
|| ||||||| ||||||||||||| ||| ||||| |
|
|
T |
7542719 |
cccatgattaccgttaagtacaaggatcaggagaa |
7542685 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #14
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 215 - 282
Target Start/End: Complemental strand, 11999350 - 11999283
Alignment:
Q |
215 |
ttgaggtagattctttatttcagggaatagacttttcttcatctattactcgtgccaagtttgaggaa |
282 |
Q |
|
|
|||||||||||||||||||||| || || || ||||||||||| || | ||| || |||||||||||| |
|
|
T |
11999350 |
ttgaggtagattctttatttcaaggcattgatttttcttcatccatcaatcgggcaaagtttgaggaa |
11999283 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #15
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 303 - 352
Target Start/End: Complemental strand, 11999988 - 11999939
Alignment:
Q |
303 |
cagatgctaagaggttaattggtaggaggtatagtgattctgttgttcaa |
352 |
Q |
|
|
||||||||||||||||||||||| ||| || ||||||| |||||||||| |
|
|
T |
11999988 |
cagatgctaagaggttaattggttggaagtttagtgatcttgttgttcaa |
11999939 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #16
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 303 - 372
Target Start/End: Original strand, 12258155 - 12258224
Alignment:
Q |
303 |
cagatgctaagaggttaattggtaggaggtatagtgattctgttgttcaaaaagacatcatgttgtggcc |
372 |
Q |
|
|
||||||||||||||||||||||||||| || ||||||| || |||||| | || || ||||||||||| |
|
|
T |
12258155 |
cagatgctaagaggttaattggtaggaagtttagtgatcaagtagttcaagatgatataatgttgtggcc |
12258224 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4 (Bit Score: 129; Significance: 2e-66; HSPs: 6)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 129; E-Value: 2e-66
Query Start/End: Original strand, 19 - 287
Target Start/End: Original strand, 9335920 - 9336188
Alignment:
Q |
19 |
tttgaagtaaaagccactgctggaaacacccacctaggtggagaggactttgataacagaatggtgaactactttgtagaggagttcaaaaagaagaata |
118 |
Q |
|
|
||||||||||||||||| || |||||||| ||||| || || ||||||||||||||||||||||| ||||| ||||| || ||||| ||||||||||||| |
|
|
T |
9335920 |
tttgaagtaaaagccaccgcaggaaacacgcaccttggaggcgaggactttgataacagaatggttaactattttgtggaagagttaaaaaagaagaata |
9336019 |
T |
|
Q |
119 |
atgtggacattagtaagaacgcaaagcccttatggaggttgagaactgcctgcgagagggcaaagaggacactctctttcgcctttgtcaccactgttga |
218 |
Q |
|
|
| |||||||| | ||||| |||| ||||| ||||||||||||||||||| ||||||||||| |||| ||| ||||| || ||||| ||||||||||| |
|
|
T |
9336020 |
aagtggacatcaagcagaacccaaaatccttaaggaggttgagaactgcctgtgagagggcaaaaaggatactgtcttttgcttttgttaccactgttga |
9336119 |
T |
|
Q |
219 |
ggtagattctttatttcagggaatagacttttcttcatctattactcgtgccaagtttgaggaaattaa |
287 |
Q |
|
|
||||||| |||||||| |||||| |||||||||||||| || ||||||||||| ||||||||| |||| |
|
|
T |
9336120 |
ggtagatgctttatttatgggaatcgacttttcttcatcaatcactcgtgccaaatttgaggaacttaa |
9336188 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #2
Raw Score: 66; E-Value: 8e-29
Query Start/End: Original strand, 31 - 284
Target Start/End: Complemental strand, 35132575 - 35132331
Alignment:
Q |
31 |
gccactgctggaaacacccacctaggtggagaggactttgataacagaatggtgaactactttgtagaggagttcaaaaagaagaataatgtggacatta |
130 |
Q |
|
|
|||||||| |||||||| || || |||||||||||||||||||||||||||||||||||||||||| | |||||||| | ||||| || || ||||||| |
|
|
T |
35132575 |
gccactgccggaaacactcatctcggtggagaggactttgataacagaatggtgaactactttgtacaagagttcaagagaaagaacaaagtagacatta |
35132476 |
T |
|
Q |
131 |
gtaagaacgcaaagcccttatggaggttgagaactgcctgcgagagggcaaagaggacactctctttcgcctttgtcaccactgttgaggtagattcttt |
230 |
Q |
|
|
|| ||| |||| || ||||||||||||||| ||||||||||||| |||| |||||| |||| ||| | |||| ||||||||||| |
|
|
T |
35132475 |
gtgggaattcaaaagcc---------ttgagaactgcctgctagagggcaaagagatcactttctttccttgttgttgccaatattgaagtagattcttt |
35132385 |
T |
|
Q |
231 |
atttcagggaatagacttttcttcatctattactcgtgccaagtttgaggaaat |
284 |
Q |
|
|
|||||| || || || ||||||||||| || | ||| ||||||||||||||||| |
|
|
T |
35132384 |
atttcaaggcattgatttttcttcatcaatcaatcgcgccaagtttgaggaaat |
35132331 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #3
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 19 - 284
Target Start/End: Complemental strand, 30775391 - 30775126
Alignment:
Q |
19 |
tttgaagtaaaagccactgctggaaacacccacctaggtggagaggactttgataacagaatggtgaactactttgtagaggagttcaaaaagaagaata |
118 |
Q |
|
|
|||||||| ||||| |||||||||||||| ||| | || |||||||||||||||||||||||| |||| |||||||||||||| || || | |||||| | |
|
|
T |
30775391 |
tttgaagttaaagcaactgctggaaacactcacatcgggggagaggactttgataacagaatgttgaattactttgtagaggaatttaagacgaagaaca |
30775292 |
T |
|
Q |
119 |
atgtggacattagtaagaacgcaaagcccttatggaggttgagaactgcctgcgagagggcaaagaggacactctctttcgcctttgtcaccactgttga |
218 |
Q |
|
|
| |||||||||| ||| ||| | || | |||||||||||| || || | |||||| ||||||||||| ||| ||| |||| |||||| |
|
|
T |
30775291 |
acgtggacattaccgggaatccaagagctttgagacagttgagaactgcatgtgaaaaggcaaaaaggacactctccttcaagtttctcacatttgttga |
30775192 |
T |
|
Q |
219 |
ggtagattctttatttcagggaatagacttttcttcatctattactcgtgccaagtttgaggaaat |
284 |
Q |
|
|
| ||||| ||||||||| | || |||||||||||||| || ||||||| ||||||||||||||| |
|
|
T |
30775191 |
gatagataatttatttcaagacattgacttttcttcatcaatcactcgtgtcaagtttgaggaaat |
30775126 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #4
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 302 - 462
Target Start/End: Original strand, 9335464 - 9335624
Alignment:
Q |
302 |
gcagatgctaagaggttaattggtaggaggtatagtgattctgttgttcaaaaagacatcatgttgtggccnttcagggncatcnctggtgagaatgata |
401 |
Q |
|
|
|||||||||||||| |||| |||||||| || ||||||| |||||||||| ||| || |||||||||| |||| || || |||||| ||||| | |
|
|
T |
9335464 |
gcagatgctaagagattaactggtaggaagtttagtgatctggttgttcaaagagatatattgttgtggccattcaaggttatttctggtgttaatgaca |
9335563 |
T |
|
Q |
402 |
aaccgatgattagtgttaagtacaagggtcaagagaagccagttagtgctgacgaaatatc |
462 |
Q |
|
|
|||| ||||||| |||||| ||||||||||||||||||| || ||||||| |||||||| |
|
|
T |
9335564 |
aacctatgattactgttaactacaagggtcaagagaagcacttttgtgctgaggaaatatc |
9335624 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #5
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 303 - 377
Target Start/End: Complemental strand, 30775846 - 30775772
Alignment:
Q |
303 |
cagatgctaagaggttaattggtaggaggtatagtgattctgttgttcaaaaagacatcatgttgtggccnttca |
377 |
Q |
|
|
|||||||||| |||||||||||||||| | ||| || |||||||||||||||| || |||||||||| |||| |
|
|
T |
30775846 |
cagatgctaaaaggttaattggtaggaaatttagcgaccctgttgttcaaaaagatattttgttgtggccattca |
30775772 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #6
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 303 - 352
Target Start/End: Complemental strand, 35133040 - 35132991
Alignment:
Q |
303 |
cagatgctaagaggttaattggtaggaggtatagtgattctgttgttcaa |
352 |
Q |
|
|
|||||||||| |||||||||||||||| || ||||||| || |||||||| |
|
|
T |
35133040 |
cagatgctaaaaggttaattggtaggaagtttagtgatcctattgttcaa |
35132991 |
T |
|
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5 (Bit Score: 82; Significance: 2e-38; HSPs: 3)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 31 - 284
Target Start/End: Complemental strand, 28220045 - 28219792
Alignment:
Q |
31 |
gccactgctggaaacacccacctaggtggagaggactttgataacagaatggtgaactactttgtagaggagttcaaaaagaagaataatgtggacatta |
130 |
Q |
|
|
||||| ||||||||||| ||||| || |||||||||||||||| || |||||||||||||| | ||||||||| || |||||||| || |||||||||| |
|
|
T |
28220045 |
gccaccgctggaaacactcacctcgggggagaggactttgatagtaggatggtgaactacttcgcagaggagtttaagaagaagaacaaggtggacatta |
28219946 |
T |
|
Q |
131 |
gtaagaacgcaaagcccttatggaggttgagaactgcctgcgagagggcaaagaggacactctctttcgcctttgtcaccactgttgaggtagattcttt |
230 |
Q |
|
|
| ||| ||| ||||| ||||||||||||| || ||| |||| ||||| |||||||| ||||| || ||||| |||| |||||||||||||||| |
|
|
T |
28219945 |
ctggaaactcaagagccttaaggaggttgagaacagcgtgcaagagagcaaaaaggacactatcttttgctgttgtcgccaccattgaggtagattcttt |
28219846 |
T |
|
Q |
231 |
atttcagggaatagacttttcttcatctattactcgtgccaagtttgaggaaat |
284 |
Q |
|
|
|||| | || || || || | |||||| ||||||||||| |||||||||||||| |
|
|
T |
28219845 |
atttgaaggcattgatttcttttcatcaattactcgtgctaagtttgaggaaat |
28219792 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #2
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 303 - 440
Target Start/End: Complemental strand, 28220545 - 28220408
Alignment:
Q |
303 |
cagatgctaagaggttaattggtaggaggtatagtgattctgttgttcaaaaagacatcatgttgtggccnttcagggncatcnctggtgagaatgataa |
402 |
Q |
|
|
||||||||||||||||||||||||||| || |||||| |||||||||||| | || || | ||||||||| |||| || ||| | || ||| || || |
|
|
T |
28220545 |
cagatgctaagaggttaattggtaggaagtttagtgactctgttgttcaagatgatataaagttgtggccattcaaggtcatttccggaacgaacgacaa |
28220446 |
T |
|
Q |
403 |
accgatgattagtgttaagtacaagggtcaagagaagc |
440 |
Q |
|
|
||| |||||| ||||||||||||||| || ||||||| |
|
|
T |
28220445 |
acccatgatttctgttaagtacaagggacaggagaagc |
28220408 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #3
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 315 - 377
Target Start/End: Original strand, 42555530 - 42555592
Alignment:
Q |
315 |
ggttaattggtaggaggtatagtgattctgttgttcaaaaagacatcatgttgtggccnttca |
377 |
Q |
|
|
||||||||||||||| || || ||||| |||||||||||| ||||| | ||||||||| |||| |
|
|
T |
42555530 |
ggttaattggtaggaagtttaatgattatgttgttcaaaatgacatgaagttgtggccattca |
42555592 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8 (Bit Score: 67; Significance: 2e-29; HSPs: 3)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 38 - 284
Target Start/End: Complemental strand, 43744936 - 43744690
Alignment:
Q |
38 |
ctggaaacacccacctaggtggagaggactttgataacagaatggtgaactactttgtagaggagttcaaaaagaagaataatgtggacattagtaagaa |
137 |
Q |
|
|
|||||||||| ||||| || |||||||| |||||||| || |||||||||||||| | ||||||||| || |||||||| || |||||||||| | || |
|
|
T |
43744936 |
ctggaaacactcacctcggaggagaggattttgataataggatggtgaactacttcgcagaggagtttaagaagaagaacaaggtggacattactggaaa |
43744837 |
T |
|
Q |
138 |
cgcaaagcccttatggaggttgagaactgcctgcgagagggcaaagaggacactctctttcgcctttgtcaccactgttgaggtagattctttatttcag |
237 |
Q |
|
|
| ||| | ||| ||||||||||||| || ||||| || ||||| |||||| | ||||| || ||||||||||| |||||||||||||||||||| || |
|
|
T |
43744836 |
cccaagagcattaaggaggttgagaacagcatgcgaaagagcaaaaaggacattatcttttgctgttgtcaccactattgaggtagattctttatttgag |
43744737 |
T |
|
Q |
238 |
ggaatagacttttcttcatctattactcgtgccaagtttgaggaaat |
284 |
Q |
|
|
|| || || || | | || | || |||||| | |||||||||||||| |
|
|
T |
43744736 |
ggcattgatttctttacaacaatcactcgtactaagtttgaggaaat |
43744690 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #2
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 303 - 440
Target Start/End: Complemental strand, 43745441 - 43745304
Alignment:
Q |
303 |
cagatgctaagaggttaattggtaggaggtatagtgattctgttgttcaaaaagacatcatgttgtggccnttcagggncatcnctggtgagaatgataa |
402 |
Q |
|
|
||||||||||||||||||||||||||| || || |||||||| ||||||||| || || | ||||||||| |||| || ||| | || |||||| || |
|
|
T |
43745441 |
cagatgctaagaggttaattggtaggaagtttaatgattctgatgttcaaaatgatatgaagttgtggccgttcaaggtcatttccggattgaatgacaa |
43745342 |
T |
|
Q |
403 |
accgatgattagtgttaagtacaagggtcaagagaagc |
440 |
Q |
|
|
||| ||||| ||||||||||||||| || ||||||| |
|
|
T |
43745341 |
acccgtgatttctgttaagtacaagggacaggagaagc |
43745304 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #3
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 15 - 191
Target Start/End: Complemental strand, 12528647 - 12528471
Alignment:
Q |
15 |
tgtctttgaagtaaaagccactgctggaaacacccacctaggtggagaggactttgataacagaatggtgaactactttgtagaggagttcaaaaagaag |
114 |
Q |
|
|
|||||| ||||| || |||||||| ||| |||| ||||| || ||||||||||||||||| |||||||||| ||||||| | ||||| || | |||| |
|
|
T |
12528647 |
tgtcttcgaagtcaaggccactgccggagacactcaccttggaggagaggactttgataatcgaatggtgaatcactttgtgaaagagtttaagaggaag |
12528548 |
T |
|
Q |
115 |
aataatgtggacattagtaagaacgcaaagcccttatggaggttgagaactgcctgcgagagggcaaagaggacact |
191 |
Q |
|
|
|| || || ||||||| | |||| |||| || || |||| ||||||||| |||||||| ||| || |||||||| |
|
|
T |
12528547 |
aacaaagttgacattattgggaactcaaaagccctaaggagattgagaactaactgcgagaaggcgaaaaggacact |
12528471 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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