View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
Legend |
| Query |
| Query hiting target |
| Query hiting target's complemental strand |
| Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: 108_6_82 (Length: 432)
Name: 108_6_82
Description: Pascalseqs
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
[»] 108_6_82 |
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[»] scaffold0168 (1 HSPs) |
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[»] scaffold0036 (1 HSPs) |
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[»] scaffold0126 (1 HSPs) |
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[»] scaffold0112 (1 HSPs) |
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[»] scaffold0119 (1 HSPs) |
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[»] scaffold0712 (1 HSPs) |
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[»] scaffold0709 (1 HSPs) |
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[»] scaffold0054 (1 HSPs) |
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[»] scaffold1808 (1 HSPs) |
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Alignment Details
Target: chr4 (Bit Score: 258; Significance: 1e-143; HSPs: 24)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 258; E-Value: 1e-143
Query Start/End: Original strand, 1 - 361
Target Start/End: Complemental strand, 41480685 - 41480313
Alignment:
Q |
1 |
aggagaggtctatgattggaagattcactgttgccgttcctgccatct-cctaatttgataccactcactt-----------------gataacaatttc |
82 |
Q |
|
|
||||||||| |||||||||||||||||||||||||||||||||||||| |||| ||||||||||||||||| |||||||||||| |
|
|
T |
41480685 |
aggagaggtttatgattggaagattcactgttgccgttcctgccatcttcctagtttgataccactcacttccaatttagcttcacttgataacaatttc |
41480586 |
T |
|
Q |
83 |
taactatggacctttgatatcaaaatggcttatatagtgtaccagtacttcttccgcttcacagctagatttgttttcgattttctgatatcatcattct |
182 |
Q |
|
|
|||||||||||||||||||||||||||||||||||||| || ||||||||| ||||||||||||||||||||||||||||||||||||||||||||| |
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|
T |
41480585 |
taactatggacctttgatatcaaaatggcttatatagt--actagtacttct---gcttcacagctagatttgttttcgattttctgatatcatcattct |
41480491 |
T |
|
Q |
183 |
atcatggagaactaaaataatagggtgatggaacacgaggggtaatattaaacatgtacgatacaccttttctaaagcatttagttgaatactcttaact |
282 |
Q |
|
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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|
T |
41480490 |
atcatggagaactaaaataatagggtgatggaacacgaggggtaatattaaacatgtacgatacaccttttctaaagcatttagttgaatactcttaact |
41480391 |
T |
|
Q |
283 |
tttgtacatttatcccacatttcattttcggcctatcacatagntaacctacataagcgaataagttagtatgaccgtt |
361 |
Q |
|
|
||||||||||||||||||||||||||||||||||||||||||| |||||||||||| | ||||||||||||||||||| |
|
|
T |
41480390 |
tttgtacatttatcccacatttcattttcggcctatcacatag-taacctacataaatgcataagttagtatgaccgtt |
41480313 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #2
Raw Score: 74; E-Value: 8e-34
Query Start/End: Original strand, 149 - 226
Target Start/End: Complemental strand, 41489049 - 41488972
Alignment:
Q |
149 |
agatttgttttcgattttctgatatcatcattctatcatggagaactaaaataatagggtgatggaacacgaggggta |
226 |
Q |
|
|
||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| |
|
|
T |
41489049 |
agatttgttttcgattttctgatatcatcattctatcatggaggactaaaataatagggtgatggaacacgaggggta |
41488972 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #3
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 360 - 432
Target Start/End: Original strand, 20166307 - 20166379
Alignment:
Q |
360 |
ttggtccccgtgagtctagctcagctggcagggacatgcattgttatatgccggggctggggttcaaacccca |
432 |
Q |
|
|
|||||||||||||| |||||||| |||||||||||||||||||||||||| ||||| | ||||| ||||||| |
|
|
T |
20166307 |
ttggtccccgtgagcgtagctcagttggcagggacatgcattgttatatgcaggggccgaggttcgaacccca |
20166379 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #4
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 363 - 431
Target Start/End: Complemental strand, 49039546 - 49039478
Alignment:
Q |
363 |
gtccccgtgagtctagctcagctggcagggacatgcattgttatatgccggggctggggttcaaacccc |
431 |
Q |
|
|
||||||||||| |||||||| |||||||||||||||||||||||||| ||| ||||||||| |||||| |
|
|
T |
49039546 |
gtccccgtgagcatagctcagttggcagggacatgcattgttatatgcagggactggggttcgaacccc |
49039478 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #5
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 363 - 431
Target Start/End: Complemental strand, 54854280 - 54854212
Alignment:
Q |
363 |
gtccccgtgagtctagctcagctggcagggacatgcattgttatatgccggggctggggttcaaacccc |
431 |
Q |
|
|
||||||||||| |||||||| |||||||||||||||| |||||||| ||||||||||||| |||||| |
|
|
T |
54854280 |
gtccccgtgagcatagctcagttggcagggacatgcataattatatgcaggggctggggttcgaacccc |
54854212 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #6
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 1 - 60
Target Start/End: Complemental strand, 41489787 - 41489728
Alignment:
Q |
1 |
aggagaggtctatgattggaagattcactgttgccgttcctgccatctcctaatttgata |
60 |
Q |
|
|
|||||||||||||||| |||||| ||| |||||| ||||||||||||||||| ||||||| |
|
|
T |
41489787 |
aggagaggtctatgataggaagactcaatgttgctgttcctgccatctcctagtttgata |
41489728 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #7
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 363 - 429
Target Start/End: Complemental strand, 41492599 - 41492533
Alignment:
Q |
363 |
gtccccgtgagtctagctcagctggcagggacatgcattgttatatgccggggctggggttcaaacc |
429 |
Q |
|
|
||||||||||| |||||||| ||||||||||||||||| |||||||| ||||| ||||||| |||| |
|
|
T |
41492599 |
gtccccgtgagcatagctcagttggcagggacatgcattattatatgcaggggccggggttcgaacc |
41492533 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #8
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 363 - 431
Target Start/End: Original strand, 36008268 - 36008337
Alignment:
Q |
363 |
gtccccgtgagtctagctcagctggcagggaca-tgcattgttatatgccggggctggggttcaaacccc |
431 |
Q |
|
|
||||||||||| |||||||| ||||||||||| ||||||||||||||| ||||| ||||||| |||||| |
|
|
T |
36008268 |
gtccccgtgagcatagctcagttggcagggacaatgcattgttatatgcaggggccggggttcgaacccc |
36008337 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #9
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 363 - 431
Target Start/End: Original strand, 53815689 - 53815758
Alignment:
Q |
363 |
gtccccgtgagtctagctcagctggcagggaca-tgcattgttatatgccggggctggggttcaaacccc |
431 |
Q |
|
|
||||||||||| |||||||| ||||||||||| |||||| |||||||| ||||||||||||| |||||| |
|
|
T |
53815689 |
gtccccgtgagcatagctcagttggcagggacaatgcattattatatgcaggggctggggttcgaacccc |
53815758 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #10
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 376 - 424
Target Start/End: Original strand, 20610746 - 20610794
Alignment:
Q |
376 |
tagctcagctggcagggacatgcattgttatatgccggggctggggttc |
424 |
Q |
|
|
|||||||| |||||||||||||||||||||||||| ||||| ||||||| |
|
|
T |
20610746 |
tagctcagttggcagggacatgcattgttatatgcaggggccggggttc |
20610794 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #11
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 366 - 432
Target Start/End: Original strand, 27921893 - 27921959
Alignment:
Q |
366 |
cccgtgagtctagctcagctggcagggacatgcattgttatatgccggggctggggttcaaacccca |
432 |
Q |
|
|
|||||||| |||||||| ||| ||||||||||||| |||||||| ||||| ||||||| ||||||| |
|
|
T |
27921893 |
cccgtgagcatagctcagttggtagggacatgcattattatatgcaggggccggggttcgaacccca |
27921959 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #12
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 363 - 424
Target Start/End: Original strand, 48512192 - 48512254
Alignment:
Q |
363 |
gtccccgtgagtctagctcagctggcagggaca-tgcattgttatatgccggggctggggttc |
424 |
Q |
|
|
||||||||||| |||||||| ||||||||||| ||||||||||||||| |||||| |||||| |
|
|
T |
48512192 |
gtccccgtgagcatagctcagttggcagggacaatgcattgttatatgcaggggctagggttc |
48512254 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #13
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 363 - 431
Target Start/End: Complemental strand, 28520833 - 28520764
Alignment:
Q |
363 |
gtccccgtgagtctagctcagctggcagggac-atgcattgttatatgccggggctggggttcaaacccc |
431 |
Q |
|
|
||||||||||| |||||||| |||||||||| ||||||| |||||||| ||||| ||||||| |||||| |
|
|
T |
28520833 |
gtccccgtgagcatagctcagttggcagggacaatgcattattatatgcaggggccggggttcgaacccc |
28520764 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #14
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 379 - 432
Target Start/End: Complemental strand, 37997931 - 37997878
Alignment:
Q |
379 |
ctcagctggcagggacatgcattgttatatgccggggctggggttcaaacccca |
432 |
Q |
|
|
||||| |||||||||||| ||||||||||||| ||| ||||||||| ||||||| |
|
|
T |
37997931 |
ctcagttggcagggacattcattgttatatgcagggtctggggttcgaacccca |
37997878 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #15
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 363 - 431
Target Start/End: Original strand, 29785144 - 29785212
Alignment:
Q |
363 |
gtccccgtgagtctagctcagctggcagggacatgcattgttatatgccggggctggggttcaaacccc |
431 |
Q |
|
|
||||||||||| |||||||| |||||||||||| || ||| ||||| ||||||||||||| |||||| |
|
|
T |
29785144 |
gtccccgtgagcatagctcagttggcagggacatacactgtaatatgtaggggctggggttcgaacccc |
29785212 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #16
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 379 - 430
Target Start/End: Complemental strand, 4419771 - 4419720
Alignment:
Q |
379 |
ctcagctggcagggacatgcattgttatatgccggggctggggttcaaaccc |
430 |
Q |
|
|
||||| || ||| ||||||||||||||||||| ||||| ||||||||||||| |
|
|
T |
4419771 |
ctcagttgtcagagacatgcattgttatatgcaggggccggggttcaaaccc |
4419720 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #17
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 360 - 431
Target Start/End: Original strand, 36257685 - 36257756
Alignment:
Q |
360 |
ttggtccccgtgagtctagctcagctggcagggacatgcattgttatatgccggggctggggttcaaacccc |
431 |
Q |
|
|
|||||||||||||| |||||||| ||||||||||| ||| | || ||||| ||||| ||||||| |||||| |
|
|
T |
36257685 |
ttggtccccgtgagcatagctcagttggcagggacaagcagtattgtatgcaggggccggggttcgaacccc |
36257756 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #18
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 363 - 410
Target Start/End: Original strand, 38657534 - 38657581
Alignment:
Q |
363 |
gtccccgtgagtctagctcagctggcagggacatgcattgttatatgc |
410 |
Q |
|
|
||||||||||| | |||||| |||||||||||||||||||||||||| |
|
|
T |
38657534 |
gtccccgtgagcatggctcagttggcagggacatgcattgttatatgc |
38657581 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #19
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 380 - 430
Target Start/End: Original strand, 15853833 - 15853883
Alignment:
Q |
380 |
tcagctggcagggacatgcattgttatatgccggggctggggttcaaaccc |
430 |
Q |
|
|
|||| ||||||| |||||||||||||||| | ||||||||||||| ||||| |
|
|
T |
15853833 |
tcagttggcaggaacatgcattgttatatacaggggctggggttcgaaccc |
15853883 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #20
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 361 - 431
Target Start/End: Original strand, 49319385 - 49319455
Alignment:
Q |
361 |
tggtccccgtgagtctagctcagctggcagggacatgcattgttatatgccggggctggggttcaaacccc |
431 |
Q |
|
|
|||||| |||||| |||||||| ||||| ||||||||||| |||||||| |||| ||||||| |||||| |
|
|
T |
49319385 |
tggtcctcgtgagcatagctcagttggcatggacatgcattattatatgcaggggtcggggttccaacccc |
49319455 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #21
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 363 - 431
Target Start/End: Original strand, 9692955 - 9693024
Alignment:
Q |
363 |
gtccccgtgagtctagctcagctggcaggga-catgcattgttatatgccggggctggggttcaaacccc |
431 |
Q |
|
|
||||||||||| |||||||| ||||||||| ||||||| |||||||| ||||| ||||||| |||||| |
|
|
T |
9692955 |
gtccccgtgagcatagctcagttggcagggataatgcattattatatgcaggggccggggttcgaacccc |
9693024 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #22
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 363 - 431
Target Start/End: Original strand, 14149786 - 14149855
Alignment:
Q |
363 |
gtccccgtgagtctagctcagctggcagggac-atgcattgttatatgccggggctggggttcaaacccc |
431 |
Q |
|
|
|||||||||| |||||||| |||||||||| ||||||| |||||||| ||||| ||||||| |||||| |
|
|
T |
14149786 |
gtccccgtgaccatagctcagttggcagggacaatgcattattatatgcaggggccggggttcgaacccc |
14149855 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #23
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 379 - 424
Target Start/End: Original strand, 42432018 - 42432063
Alignment:
Q |
379 |
ctcagctggcagggacatgcattgttatatgccggggctggggttc |
424 |
Q |
|
|
||||| |||||||||||||||||||||||||| ||| |||||||| |
|
|
T |
42432018 |
ctcagttggcagggacatgcattgttatatgcagggattggggttc |
42432063 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #24
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 363 - 431
Target Start/End: Complemental strand, 48968312 - 48968243
Alignment:
Q |
363 |
gtccccgtgagtctagctcagctggcagggac-atgcattgttatatgccggggctggggttcaaacccc |
431 |
Q |
|
|
||||||||||| ||| |||| |||||||||| ||||||| |||||||| ||||| ||||||| |||||| |
|
|
T |
48968312 |
gtccccgtgagcatagttcagttggcagggacaatgcattattatatgcaggggccggggttcgaacccc |
48968243 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0168 (Bit Score: 42; Significance: 0.00000000000001; HSPs: 1)
Name: scaffold0168
Description:
Target: scaffold0168; HSP #1
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 363 - 424
Target Start/End: Complemental strand, 34134 - 34073
Alignment:
Q |
363 |
gtccccgtgagtctagctcagctggcagggacatgcattgttatatgccggggctggggttc |
424 |
Q |
|
|
||||||||||| |||||||| |||||||||||||||||||||||||| ||||| ||||||| |
|
|
T |
34134 |
gtccccgtgagcatagctcagttggcagggacatgcattgttatatgcaggggccggggttc |
34073 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6 (Bit Score: 42; Significance: 0.00000000000001; HSPs: 16)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 363 - 424
Target Start/End: Original strand, 34524869 - 34524930
Alignment:
Q |
363 |
gtccccgtgagtctagctcagctggcagggacatgcattgttatatgccggggctggggttc |
424 |
Q |
|
|
||||||||||| |||||||| |||||||||||||||||||||||||| ||||| ||||||| |
|
|
T |
34524869 |
gtccccgtgagcatagctcagttggcagggacatgcattgttatatgcaggggccggggttc |
34524930 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #2
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 378 - 430
Target Start/End: Complemental strand, 8253676 - 8253624
Alignment:
Q |
378 |
gctcagctggcagggacatgcattgttatatgccggggctggggttcaaaccc |
430 |
Q |
|
|
|||||| ||||| |||||||||||||||||||| ||||||||||||| ||||| |
|
|
T |
8253676 |
gctcagttggcatggacatgcattgttatatgcaggggctggggttcgaaccc |
8253624 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #3
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 363 - 431
Target Start/End: Original strand, 10455736 - 10455804
Alignment:
Q |
363 |
gtccccgtgagtctagctcagctggcagggacatgcattgttatatgccggggctggggttcaaacccc |
431 |
Q |
|
|
||||||||||| ||| |||| ||||||| |||||||||||||||||| ||||| ||||||| |||||| |
|
|
T |
10455736 |
gtccccgtgagcatagttcagttggcaggaacatgcattgttatatgcaggggccggggttcgaacccc |
10455804 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #4
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 363 - 429
Target Start/End: Original strand, 2945589 - 2945656
Alignment:
Q |
363 |
gtccccgtgagtctagctcagctggcagggaca-tgcattgttatatgccggggctggggttcaaacc |
429 |
Q |
|
|
||||||||||| |||||||| ||||||||||| ||||||||||||||| |||| |||||||||||| |
|
|
T |
2945589 |
gtccccgtgagcatagctcagttggcagggacaatgcattgttatatgcaggggtcggggttcaaacc |
2945656 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #5
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 363 - 429
Target Start/End: Original strand, 4844137 - 4844203
Alignment:
Q |
363 |
gtccccgtgagtctagctcagctggcagggacatgcattgttatatgccggggctggggttcaaacc |
429 |
Q |
|
|
|||||| ||||| || ||||| |||||||||||||||||||||||||| |||| |||||| ||||| |
|
|
T |
4844137 |
gtccccatgagtataactcagttggcagggacatgcattgttatatgcaggggtcggggtttaaacc |
4844203 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #6
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 363 - 432
Target Start/End: Original strand, 9064859 - 9064929
Alignment:
Q |
363 |
gtccccgtgagtctagctcagctggcagggac-atgcattgttatatgccggggctggggttcaaacccca |
432 |
Q |
|
|
||||||||||| |||||||| |||||||||| ||||||| |||||||| ||||| ||||||| ||||||| |
|
|
T |
9064859 |
gtccccgtgagcatagctcagttggcagggacaatgcattattatatgcaggggccggggttcgaacccca |
9064929 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #7
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 379 - 424
Target Start/End: Complemental strand, 20858468 - 20858423
Alignment:
Q |
379 |
ctcagctggcagggacatgcattgttatatgccggggctggggttc |
424 |
Q |
|
|
||||| |||||||||||||||||||||||||| |||| |||||||| |
|
|
T |
20858468 |
ctcagttggcagggacatgcattgttatatgcaggggttggggttc |
20858423 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #8
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 363 - 432
Target Start/End: Complemental strand, 26669760 - 26669691
Alignment:
Q |
363 |
gtccccgtgagtctagctcagctggcagggacatgcattgttatatgccggggctggggttcaaacccca |
432 |
Q |
|
|
||||||||||| |||||||| ||| |||||||||||| ||||||| ||||||||||||| ||||||| |
|
|
T |
26669760 |
gtccccgtgagcatagctcagttggtagggacatgcataattatatgtaggggctggggttcgaacccca |
26669691 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #9
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 363 - 430
Target Start/End: Complemental strand, 14981804 - 14981736
Alignment:
Q |
363 |
gtccccgtgagtctagctcagctggcagggac-atgcattgttatatgccggggctggggttcaaaccc |
430 |
Q |
|
|
||||||||||| |||||||| |||||||||| ||||||| |||||||| ||||| ||||||| ||||| |
|
|
T |
14981804 |
gtccccgtgagcatagctcagttggcagggacaatgcattattatatgcaggggccggggttcgaaccc |
14981736 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #10
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 363 - 431
Target Start/End: Original strand, 30833011 - 30833079
Alignment:
Q |
363 |
gtccccgtgagtctagctcagctggcagggacatgcattgttatatgccggggctggggttcaaacccc |
431 |
Q |
|
|
|||||| |||| ||| |||| |||||||||||||||||||||||||| |||| ||||||| |||||| |
|
|
T |
30833011 |
gtccccatgagcatagttcagttggcagggacatgcattgttatatgcaggggtcggggttcgaacccc |
30833079 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #11
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 363 - 410
Target Start/End: Original strand, 9031760 - 9031807
Alignment:
Q |
363 |
gtccccgtgagtctagctcagctggcagggacatgcattgttatatgc |
410 |
Q |
|
|
|||||||||| |||||||| |||||||||||||||||||||||||| |
|
|
T |
9031760 |
gtccccgtgaacatagctcagttggcagggacatgcattgttatatgc |
9031807 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #12
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 376 - 410
Target Start/End: Original strand, 8309171 - 8309205
Alignment:
Q |
376 |
tagctcagctggcagggacatgcattgttatatgc |
410 |
Q |
|
|
|||||||| |||||||||||||||||||||||||| |
|
|
T |
8309171 |
tagctcagttggcagggacatgcattgttatatgc |
8309205 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #13
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 362 - 432
Target Start/End: Complemental strand, 25064771 - 25064701
Alignment:
Q |
362 |
ggtccccgtgagtctagctcagctggcagggacatgcattgttatatgccggggctggggttcaaacccca |
432 |
Q |
|
|
|||||||||||| ||| |||| ||| | ||||||||||| |||||||| |||| |||||||| ||||||| |
|
|
T |
25064771 |
ggtccccgtgagcatagttcagttggtatggacatgcattattatatgcaggggttggggttcgaacccca |
25064701 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #14
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 363 - 431
Target Start/End: Original strand, 3448345 - 3448414
Alignment:
Q |
363 |
gtccccgtgagtctagctcagctggcagggaca-tgcattgttatatgccggggctggggttcaaacccc |
431 |
Q |
|
|
||||||||||| ||||||| ||||||||||| |||||||||||| || ||||| ||||||| |||||| |
|
|
T |
3448345 |
gtccccgtgagcatagctcaattggcagggacaatgcattgttatacgcaggggccggggttcgaacccc |
3448414 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #15
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 363 - 424
Target Start/End: Original strand, 8175990 - 8176051
Alignment:
Q |
363 |
gtccccgtgagtctagctcagctggcagggacatgcattgttatatgccggggctggggttc |
424 |
Q |
|
|
||||||||||| |||||||| || ||| ||||||||||||||||||| ||| |||| |||| |
|
|
T |
8175990 |
gtccccgtgagcatagctcagttgacagagacatgcattgttatatgcagggactggtgttc |
8176051 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #16
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 363 - 423
Target Start/End: Complemental strand, 2955205 - 2955145
Alignment:
Q |
363 |
gtccccgtgagtctagctcagctggcagggacatgcattgttatatgccggggctggggtt |
423 |
Q |
|
|
||||||||||| ||| |||| || |||||||||||||| |||||||| ||||| |||||| |
|
|
T |
2955205 |
gtccccgtgagcatagttcagatgccagggacatgcattattatatgcaggggcaggggtt |
2955145 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1 (Bit Score: 42; Significance: 0.00000000000001; HSPs: 27)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 363 - 424
Target Start/End: Original strand, 18003810 - 18003871
Alignment:
Q |
363 |
gtccccgtgagtctagctcagctggcagggacatgcattgttatatgccggggctggggttc |
424 |
Q |
|
|
||||||||||| |||||||| |||||||||||||||||||||||||| ||||| ||||||| |
|
|
T |
18003810 |
gtccccgtgagcatagctcagttggcagggacatgcattgttatatgcaggggccggggttc |
18003871 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #2
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 363 - 431
Target Start/End: Complemental strand, 9768910 - 9768842
Alignment:
Q |
363 |
gtccccgtgagtctagctcagctggcagggacatgcattgttatatgccggggctggggttcaaacccc |
431 |
Q |
|
|
||||||||||| |||||||| |||||||||||||||||||||||||| |||| ||||||| |||||| |
|
|
T |
9768910 |
gtccccgtgagcatagctcagttggcagggacatgcattgttatatgcaggggtcggggttcgaacccc |
9768842 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #3
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 363 - 431
Target Start/End: Complemental strand, 52961183 - 52961115
Alignment:
Q |
363 |
gtccccgtgagtctagctcagctggcagggacatgcattgttatatgccggggctggggttcaaacccc |
431 |
Q |
|
|
||||||||||| |||||||| ||||| |||||||||||||||||||| ||||| ||||||| |||||| |
|
|
T |
52961183 |
gtccccgtgagcatagctcagttggcaaggacatgcattgttatatgcaggggccggggttcgaacccc |
52961115 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #4
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 363 - 430
Target Start/End: Complemental strand, 7906427 - 7906360
Alignment:
Q |
363 |
gtccccgtgagtctagctcagctggcagggacatgcattgttatatgccggggctggggttcaaaccc |
430 |
Q |
|
|
||||||||||| ||| |||| ||| |||||||||||||||||||||| ||||||||||||| ||||| |
|
|
T |
7906427 |
gtccccgtgagcatagttcagttggtagggacatgcattgttatatgcaggggctggggttcgaaccc |
7906360 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #5
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 363 - 431
Target Start/End: Original strand, 17350054 - 17350123
Alignment:
Q |
363 |
gtccccgtgagtctagctcagctggcagggac-atgcattgttatatgccggggctggggttcaaacccc |
431 |
Q |
|
|
|||||||||||| |||||||| |||||||||| ||||||| |||||||| ||||| ||||||| |||||| |
|
|
T |
17350054 |
gtccccgtgagtatagctcagttggcagggacaatgcattattatatgcaggggccggggttcgaacccc |
17350123 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #6
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 363 - 424
Target Start/End: Original strand, 42908765 - 42908826
Alignment:
Q |
363 |
gtccccgtgagtctagctcagctggcagggacatgcattgttatatgccggggctggggttc |
424 |
Q |
|
|
||||||||||| |||||||| |||||||||||||||||||||||||| |||| ||||||| |
|
|
T |
42908765 |
gtccccgtgagcttagctcagttggcagggacatgcattgttatatgcaggggtcggggttc |
42908826 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #7
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 376 - 431
Target Start/End: Original strand, 16182816 - 16182871
Alignment:
Q |
376 |
tagctcagctggcagggacatgcattgttatatgccggggctggggttcaaacccc |
431 |
Q |
|
|
|||||||| |||||| |||||||||| ||||||| |||||||||||||||||||| |
|
|
T |
16182816 |
tagctcagttggcagagacatgcattattatatgtaggggctggggttcaaacccc |
16182871 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #8
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 363 - 432
Target Start/End: Original strand, 18179322 - 18179391
Alignment:
Q |
363 |
gtccccgtgagtctagctcagctggcagggacatgcattgttatatgccggggctggggttcaaacccca |
432 |
Q |
|
|
||||||||||| || ||||| |||||||||||||||||||||||||| ||| | || |||| ||||||| |
|
|
T |
18179322 |
gtccccgtgagcataactcagttggcagggacatgcattgttatatgcagggaccggagttcgaacccca |
18179391 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #9
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 363 - 432
Target Start/End: Complemental strand, 33176204 - 33176135
Alignment:
Q |
363 |
gtccccgtgagtctagctcagctggcagggacatgcattgttatatgccggggctggggttcaaacccca |
432 |
Q |
|
|
|||||| |||| |||||||| ||| ||||| |||||||||||||||| |||||||| ||||||| |||| |
|
|
T |
33176204 |
gtccccttgagcatagctcagttggtagggatatgcattgttatatgcaggggctggagttcaaatccca |
33176135 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #10
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 376 - 429
Target Start/End: Original strand, 50575908 - 50575961
Alignment:
Q |
376 |
tagctcagctggcagggacatgcattgttatatgccggggctggggttcaaacc |
429 |
Q |
|
|
|||||||| ||| |||||||||||||||||||||| |||||||||||| |||| |
|
|
T |
50575908 |
tagctcagttggaagggacatgcattgttatatgcaagggctggggttcgaacc |
50575961 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #11
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 379 - 431
Target Start/End: Complemental strand, 50199561 - 50199509
Alignment:
Q |
379 |
ctcagctggcagggacatgcattgttatatgccggggctggggttcaaacccc |
431 |
Q |
|
|
||||| ||| |||||||||||||||||||||| ||||| ||||||| |||||| |
|
|
T |
50199561 |
ctcagttggtagggacatgcattgttatatgcaggggccggggttcgaacccc |
50199509 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #12
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 376 - 431
Target Start/End: Complemental strand, 3341824 - 3341769
Alignment:
Q |
376 |
tagctcagctggcagggacatgcattgttatatgccggggctggggttcaaacccc |
431 |
Q |
|
|
|||||||| ||||||||||||||||| |||||||| ||||| |||| || |||||| |
|
|
T |
3341824 |
tagctcagttggcagggacatgcattattatatgcaggggccggggatcgaacccc |
3341769 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #13
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 362 - 424
Target Start/End: Original strand, 195037 - 195099
Alignment:
Q |
362 |
ggtccccgtgagtctagctcagctggcagggacatgcattgttatatgccggggctggggttc |
424 |
Q |
|
|
|||||| ||||| |||||||| |||||||||||||||| |||||||| ||||||| ||||| |
|
|
T |
195037 |
ggtccctgtgagcgtagctcagttggcagggacatgcataattatatgcaggggctgaggttc |
195099 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #14
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 366 - 424
Target Start/End: Complemental strand, 7015785 - 7015727
Alignment:
Q |
366 |
cccgtgagtctagctcagctggcagggacatgcattgttatatgccggggctggggttc |
424 |
Q |
|
|
|||||||| |||||||| |||| |||||||||||||||||||| ||||||| ||||| |
|
|
T |
7015785 |
cccgtgagcatagctcagttggctgggacatgcattgttatatgtaggggctgaggttc |
7015727 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #15
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 376 - 430
Target Start/End: Original strand, 19536724 - 19536778
Alignment:
Q |
376 |
tagctcagctggcagggacatgcattgttatatgccggggctggggttcaaaccc |
430 |
Q |
|
|
|||||||| ||| |||||||||||||| |||||| ||||||||||||| ||||| |
|
|
T |
19536724 |
tagctcagttggtagggacatgcattgctatatgtaggggctggggttcgaaccc |
19536778 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #16
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 363 - 424
Target Start/End: Original strand, 40678816 - 40678878
Alignment:
Q |
363 |
gtccccgtgagtctagctcagctggcagggac-atgcattgttatatgccggggctggggttc |
424 |
Q |
|
|
||||||||||| |||||||| |||||||||| ||||||| |||||||| ||||| ||||||| |
|
|
T |
40678816 |
gtccccgtgagcatagctcagttggcagggacaatgcattattatatgcaggggccggggttc |
40678878 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #17
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 366 - 431
Target Start/End: Complemental strand, 52833205 - 52833139
Alignment:
Q |
366 |
cccgtgagtctagctcagctggcagggac-atgcattgttatatgccggggctggggttcaaacccc |
431 |
Q |
|
|
|||||||| ||| ||||| |||||||||| ||||||| |||||||| ||||| ||||||| |||||| |
|
|
T |
52833205 |
cccgtgagcctaactcagttggcagggacaatgcattattatatgcaggggccggggttcgaacccc |
52833139 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #18
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 363 - 431
Target Start/End: Complemental strand, 2052784 - 2052715
Alignment:
Q |
363 |
gtccccgtgagtctagctcagctggcagggac-atgcattgttatatgccggggctggggttcaaacccc |
431 |
Q |
|
|
||||||||||| |||||||| |||||||||| ||||||| | |||||| ||||| ||||||| |||||| |
|
|
T |
2052784 |
gtccccgtgagcatagctcagttggcagggacaatgcattatcatatgcaggggccggggttcgaacccc |
2052715 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #19
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 376 - 409
Target Start/End: Original strand, 5862135 - 5862168
Alignment:
Q |
376 |
tagctcagctggcagggacatgcattgttatatg |
409 |
Q |
|
|
|||||||| ||||||||||||||||||||||||| |
|
|
T |
5862135 |
tagctcagttggcagggacatgcattgttatatg |
5862168 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #20
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 363 - 415
Target Start/End: Original strand, 9527419 - 9527472
Alignment:
Q |
363 |
gtccccgtgagtctagctcagctggcagggac-atgcattgttatatgccgggg |
415 |
Q |
|
|
||||||||||| |||||||| |||||||||| |||||||||||||||| |||| |
|
|
T |
9527419 |
gtccccgtgagcatagctcagttggcagggacaatgcattgttatatgcagggg |
9527472 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #21
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 363 - 431
Target Start/End: Complemental strand, 19976654 - 19976585
Alignment:
Q |
363 |
gtccccgtgagtctagctcagctggcagggac-atgcattgttatatgccggggctggggttcaaacccc |
431 |
Q |
|
|
||||||||||| |||||||| |||||||||| ||| || ||||||||| ||||| ||||||| |||||| |
|
|
T |
19976654 |
gtccccgtgagcatagctcagttggcagggacaatgtatggttatatgcaggggccggggttcgaacccc |
19976585 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #22
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 363 - 431
Target Start/End: Original strand, 29491463 - 29491532
Alignment:
Q |
363 |
gtccccgtgagtctagctcagctggcagggac-atgcattgttatatgccggggctggggttcaaacccc |
431 |
Q |
|
|
||||||||||| |||||||| |||||||||| ||||||| |||||||| |||| ||||||| |||||| |
|
|
T |
29491463 |
gtccccgtgagcatagctcagttggcagggacaatgcattattatatgcaggggtcggggttcgaacccc |
29491532 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #23
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 363 - 431
Target Start/End: Original strand, 39238709 - 39238778
Alignment:
Q |
363 |
gtccccgtgagtctagctcagctggcagggac-atgcattgttatatgccggggctggggttcaaacccc |
431 |
Q |
|
|
||||||||||| |||||||| |||||||||| ||||||| |||||||| ||||| | ||||| |||||| |
|
|
T |
39238709 |
gtccccgtgagcatagctcagttggcagggacaatgcattattatatgcaggggccgaggttcgaacccc |
39238778 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #24
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 363 - 432
Target Start/End: Original strand, 42801873 - 42801942
Alignment:
Q |
363 |
gtccccgtgagtctagctcagctggcagggacatgcattgttatatgccggggctggggttcaaacccca |
432 |
Q |
|
|
|||||||||| |||||||| || ||| ||||||||||||||||||| | || |||||||| ||||||| |
|
|
T |
42801873 |
gtccccgtgaacatagctcagttgacagagacatgcattgttatatgcagaggttggggttcgaacccca |
42801942 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #25
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 376 - 429
Target Start/End: Original strand, 43020618 - 43020671
Alignment:
Q |
376 |
tagctcagctggcagggacatgcattgttatatgccggggctggggttcaaacc |
429 |
Q |
|
|
|||||| | ||||||||||||||||| |||||||| |||| |||||||| |||| |
|
|
T |
43020618 |
tagctcggttggcagggacatgcattattatatgcaggggttggggttcgaacc |
43020671 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #26
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 363 - 431
Target Start/End: Original strand, 1721134 - 1721202
Alignment:
Q |
363 |
gtccccgtgagtctagctcagctggcagggacatgcattgttatatgccggggctggggttcaaacccc |
431 |
Q |
|
|
||||| ||||| |||||||| ||| ||| |||||||||||||||||| ||||| ||| ||| |||||| |
|
|
T |
1721134 |
gtccctgtgagcatagctcagttggtaggaacatgcattgttatatgcaggggccgggtttcgaacccc |
1721202 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #27
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 360 - 432
Target Start/End: Original strand, 9931078 - 9931150
Alignment:
Q |
360 |
ttggtccccgtgagtctagctcagctggcagggacatgcattgttatatgccggggctggggttcaaacccca |
432 |
Q |
|
|
|||||||||||||| || ||||| | ||||||||||||||| |||||||| | ||||| |||| ||||||| |
|
|
T |
9931078 |
ttggtccccgtgagcataactcagttagcagggacatgcattattatatgcaagagctggagttcgaacccca |
9931150 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3 (Bit Score: 41; Significance: 0.00000000000004; HSPs: 21)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 363 - 423
Target Start/End: Original strand, 40160729 - 40160789
Alignment:
Q |
363 |
gtccccgtgagtctagctcagctggcagggacatgcattgttatatgccggggctggggtt |
423 |
Q |
|
|
|||| |||||| ||||||| ||||||||||||||||||||||||||||||||||||||| |
|
|
T |
40160729 |
gtcctcgtgagcatagctcaattggcagggacatgcattgttatatgccggggctggggtt |
40160789 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #2
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 363 - 429
Target Start/End: Complemental strand, 16874291 - 16874225
Alignment:
Q |
363 |
gtccccgtgagtctagctcagctggcagggacatgcattgttatatgccggggctggggttcaaacc |
429 |
Q |
|
|
||||||||||| |||||||| |||||||||||||||||||||||||| ||||| | ||||| |||| |
|
|
T |
16874291 |
gtccccgtgagcatagctcagttggcagggacatgcattgttatatgcaggggccgaggttcgaacc |
16874225 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #3
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 363 - 432
Target Start/End: Original strand, 43774178 - 43774248
Alignment:
Q |
363 |
gtccccgtgagtctagctcagctggcagggac-atgcattgttatatgccggggctggggttcaaacccca |
432 |
Q |
|
|
|||||||||||| |||||||| |||||||||| |||||||||||||||| |||| ||||||| ||||||| |
|
|
T |
43774178 |
gtccccgtgagtatagctcagttggcagggacaatgcattgttatatgcaggggtcggggttcgaacccca |
43774248 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #4
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 363 - 432
Target Start/End: Original strand, 19137613 - 19137682
Alignment:
Q |
363 |
gtccccgtgagtctagctcagctggcagggacatgcattgttatatgccggggctggggttcaaacccca |
432 |
Q |
|
|
||||||||||| |||||||| ||||||| |||||||||||||||||| ||||| | ||||| ||||||| |
|
|
T |
19137613 |
gtccccgtgagcatagctcagttggcaggaacatgcattgttatatgcaggggccgaggttcgaacccca |
19137682 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #5
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 376 - 431
Target Start/End: Original strand, 2903715 - 2903770
Alignment:
Q |
376 |
tagctcagctggcagggacatgcattgttatatgccggggctggggttcaaacccc |
431 |
Q |
|
|
||||| || ||||| |||||| ||||||||||||| |||||||||||||||||||| |
|
|
T |
2903715 |
tagcttagttggcatggacatacattgttatatgcaggggctggggttcaaacccc |
2903770 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #6
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 363 - 431
Target Start/End: Original strand, 9624976 - 9625045
Alignment:
Q |
363 |
gtccccgtgagtctagctcagctggcagggac-atgcattgttatatgccggggctggggttcaaacccc |
431 |
Q |
|
|
||||||||||| |||||||| |||||||||| ||||||| |||||||| ||||| ||||||| |||||| |
|
|
T |
9624976 |
gtccccgtgagcatagctcagttggcagggacaatgcattattatatgcaggggccggggttcgaacccc |
9625045 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #7
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 363 - 431
Target Start/End: Original strand, 14868678 - 14868747
Alignment:
Q |
363 |
gtccccgtgagtctagctcagctggcagggac-atgcattgttatatgccggggctggggttcaaacccc |
431 |
Q |
|
|
||||||||||| |||||||| |||||||||| ||||||| |||||||| ||||| ||||||| |||||| |
|
|
T |
14868678 |
gtccccgtgagcatagctcagttggcagggacaatgcattattatatgcaggggccggggttcgaacccc |
14868747 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #8
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 363 - 431
Target Start/End: Complemental strand, 27183783 - 27183714
Alignment:
Q |
363 |
gtccccgtgagtctagctcagctggcagggac-atgcattgttatatgccggggctggggttcaaacccc |
431 |
Q |
|
|
||||||||||| |||||||| |||||||||| ||||||| |||||||| ||||| ||||||| |||||| |
|
|
T |
27183783 |
gtccccgtgagcatagctcagttggcagggacaatgcattattatatgcaggggccggggttcgaacccc |
27183714 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #9
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 367 - 420
Target Start/End: Complemental strand, 30745828 - 30745775
Alignment:
Q |
367 |
ccgtgagtctagctcagctggcagggacatgcattgttatatgccggggctggg |
420 |
Q |
|
|
||||||| |||||||| |||||||||||||||||||||||||| | ||||||| |
|
|
T |
30745828 |
ccgtgagcatagctcagttggcagggacatgcattgttatatgcggaggctggg |
30745775 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #10
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 379 - 432
Target Start/End: Complemental strand, 34407175 - 34407122
Alignment:
Q |
379 |
ctcagctggcagggacatgcattgttatatgccggggctggggttcaaacccca |
432 |
Q |
|
|
||||| ||||||||||||||||| |||||||| |||| |||||||| ||||||| |
|
|
T |
34407175 |
ctcagttggcagggacatgcattattatatgcaggggttggggttcgaacccca |
34407122 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #11
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 363 - 431
Target Start/End: Original strand, 47191366 - 47191435
Alignment:
Q |
363 |
gtccccgtgagtctagctcagctggcagggac-atgcattgttatatgccggggctggggttcaaacccc |
431 |
Q |
|
|
||||||||||| |||||||| |||||||||| ||||||| |||||||| |||||||| |||| |||||| |
|
|
T |
47191366 |
gtccccgtgagcatagctcagttggcagggacaatgcattattatatgcaggggctggagttcgaacccc |
47191435 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #12
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 363 - 415
Target Start/End: Original strand, 12236593 - 12236645
Alignment:
Q |
363 |
gtccccgtgagtctagctcagctggcagggacatgcattgttatatgccgggg |
415 |
Q |
|
|
||||||||||| |||||||| ||||||||||||||||| |||||||| |||| |
|
|
T |
12236593 |
gtccccgtgagcgtagctcagttggcagggacatgcattattatatgcagggg |
12236645 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #13
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 370 - 410
Target Start/End: Original strand, 51017791 - 51017831
Alignment:
Q |
370 |
tgagtctagctcagctggcagggacatgcattgttatatgc |
410 |
Q |
|
|
||||| |||||||| |||||||||||||||||||||||||| |
|
|
T |
51017791 |
tgagtatagctcagttggcagggacatgcattgttatatgc |
51017831 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #14
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 379 - 430
Target Start/End: Complemental strand, 31108845 - 31108794
Alignment:
Q |
379 |
ctcagctggcagggacatgcattgttatatgccggggctggggttcaaaccc |
430 |
Q |
|
|
||||| |||||||||||||||| |||||||| ||||||||||||| ||||| |
|
|
T |
31108845 |
ctcagttggcagggacatgcataattatatgcaggggctggggttcgaaccc |
31108794 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #15
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 376 - 410
Target Start/End: Complemental strand, 12143495 - 12143461
Alignment:
Q |
376 |
tagctcagctggcagggacatgcattgttatatgc |
410 |
Q |
|
|
|||||||| |||||||||||||||||||||||||| |
|
|
T |
12143495 |
tagctcagttggcagggacatgcattgttatatgc |
12143461 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #16
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 367 - 416
Target Start/End: Original strand, 3973300 - 3973349
Alignment:
Q |
367 |
ccgtgagtctagctcagctggcagggacatgcattgttatatgccggggc |
416 |
Q |
|
|
||||||| |||||||| ||| |||||||||||||||||||||| ||||| |
|
|
T |
3973300 |
ccgtgagcatagctcagttggtagggacatgcattgttatatgcaggggc |
3973349 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #17
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 367 - 416
Target Start/End: Complemental strand, 3996576 - 3996527
Alignment:
Q |
367 |
ccgtgagtctagctcagctggcagggacatgcattgttatatgccggggc |
416 |
Q |
|
|
||||||| |||||||| ||| |||||||||||||||||||||| ||||| |
|
|
T |
3996576 |
ccgtgagcatagctcagttggtagggacatgcattgttatatgcaggggc |
3996527 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #18
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 379 - 431
Target Start/End: Complemental strand, 3461809 - 3461757
Alignment:
Q |
379 |
ctcagctggcagggacatgcattgttatatgccggggctggggttcaaacccc |
431 |
Q |
|
|
||||| || |||||||||||||||||||||| |||| |||||||| |||||| |
|
|
T |
3461809 |
ctcagttgacagggacatgcattgttatatgtaggggttggggttcgaacccc |
3461757 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #19
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 376 - 416
Target Start/End: Complemental strand, 4010106 - 4010066
Alignment:
Q |
376 |
tagctcagctggcagggacatgcattgttatatgccggggc |
416 |
Q |
|
|
|||||||| ||| |||||||||||||||||||||| ||||| |
|
|
T |
4010106 |
tagctcagttggtagggacatgcattgttatatgcaggggc |
4010066 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #20
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 363 - 415
Target Start/End: Original strand, 24130553 - 24130605
Alignment:
Q |
363 |
gtccccgtgagtctagctcagctggcagggacatgcattgttatatgccgggg |
415 |
Q |
|
|
||||||||||| || ||||| |||||||||||| ||||||||||||| |||| |
|
|
T |
24130553 |
gtccccgtgagcataactcagttggcagggacatacattgttatatgcagggg |
24130605 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #21
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 360 - 431
Target Start/End: Original strand, 52030111 - 52030183
Alignment:
Q |
360 |
ttggtccccgtgagtctagctcagctggcagggac-atgcattgttatatgccggggctggggttcaaacccc |
431 |
Q |
|
|
|||||||||||||| || ||||| |||||||||| ||| ||| |||||||| ||||| ||||||| |||||| |
|
|
T |
52030111 |
ttggtccccgtgagcataactcagttggcagggacaatgtattattatatgcaggggccggggttcgaacccc |
52030183 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0036 (Bit Score: 39; Significance: 0.0000000000006; HSPs: 1)
Name: scaffold0036
Description:
Target: scaffold0036; HSP #1
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 362 - 431
Target Start/End: Original strand, 25018 - 25088
Alignment:
Q |
362 |
ggtccccgtgagtctagctcagctggcagggaca-tgcattgttatatgccggggctggggttcaaacccc |
431 |
Q |
|
|
|||||||||||| |||||||| ||||||||||| |||||| |||||||| ||||||||||||| |||||| |
|
|
T |
25018 |
ggtccccgtgagcatagctcagttggcagggacaatgcattattatatgcaggggctggggttcgaacccc |
25088 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8 (Bit Score: 39; Significance: 0.0000000000006; HSPs: 24)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 363 - 429
Target Start/End: Complemental strand, 39432429 - 39432363
Alignment:
Q |
363 |
gtccccgtgagtctagctcagctggcagggacatgcattgttatatgccggggctggggttcaaacc |
429 |
Q |
|
|
||||||||||| |||||||| ||||||||||||||| |||||||||| |||| |||||||| |||| |
|
|
T |
39432429 |
gtccccgtgagcatagctcagttggcagggacatgcaatgttatatgcaggggttggggttcgaacc |
39432363 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #2
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 363 - 431
Target Start/End: Original strand, 2800012 - 2800081
Alignment:
Q |
363 |
gtccccgtgagtctagctcagctggcagggac-atgcattgttatatgccggggctggggttcaaacccc |
431 |
Q |
|
|
||||||||||| |||||||| |||||||||| ||||||| |||||||| ||||| ||||||| |||||| |
|
|
T |
2800012 |
gtccccgtgagcatagctcagttggcagggacaatgcattattatatgcaggggccggggttcgaacccc |
2800081 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #3
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 361 - 430
Target Start/End: Complemental strand, 6372706 - 6372637
Alignment:
Q |
361 |
tggtccccgtgagtctagctcagctggcagggacatgcattgttatatgccggggctggggttcaaaccc |
430 |
Q |
|
|
||||| ||||||| |||||||| |||||||||||||||| |||||||| |||| |||||||| ||||| |
|
|
T |
6372706 |
tggtctccgtgaggatagctcagttggcagggacatgcataattatatgcagggggtggggttcgaaccc |
6372637 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #4
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 363 - 432
Target Start/End: Original strand, 18577107 - 18577176
Alignment:
Q |
363 |
gtccccgtgagtctagctcagctggcagggacatgcattgttatatgccggggctggggttcaaacccca |
432 |
Q |
|
|
||||||||||| || ||||| || |||||||||| |||||||||||| |||| ||||||||||||||| |
|
|
T |
18577107 |
gtccccgtgagcataactcagttgacagggacatgtattgttatatgcaggggtcggggttcaaacccca |
18577176 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #5
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 363 - 408
Target Start/End: Complemental strand, 32940415 - 32940370
Alignment:
Q |
363 |
gtccccgtgagtctagctcagctggcagggacatgcattgttatat |
408 |
Q |
|
|
|||||||||||| |||||||| || ||||||||||||||||||||| |
|
|
T |
32940415 |
gtccccgtgagtatagctcagttgacagggacatgcattgttatat |
32940370 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #6
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 376 - 432
Target Start/End: Original strand, 26657863 - 26657919
Alignment:
Q |
376 |
tagctcagctggcagggacatgcattgttatatgccggggctggggttcaaacccca |
432 |
Q |
|
|
|||||||| ||| |||||||||||||||||||||| ||| | ||||||| ||||||| |
|
|
T |
26657863 |
tagctcagttggtagggacatgcattgttatatgcagggaccggggttcgaacccca |
26657919 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #7
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 363 - 429
Target Start/End: Complemental strand, 14011139 - 14011073
Alignment:
Q |
363 |
gtccccgtgagtctagctcagctggcagggacatgcattgttatatgccggggctggggttcaaacc |
429 |
Q |
|
|
||||| ||||| ||| |||| |||||||||||||||||||||||||| ||||| || |||| |||| |
|
|
T |
14011139 |
gtccctgtgagcatagttcagttggcagggacatgcattgttatatgcaggggccggagttcgaacc |
14011073 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #8
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 363 - 424
Target Start/End: Original strand, 14012605 - 14012667
Alignment:
Q |
363 |
gtccccgtgagtctagctcagctggcagggaca-tgcattgttatatgccggggctggggttc |
424 |
Q |
|
|
||||||||||| ||| |||| ||||||||||| ||||||||||||||| ||||| ||||||| |
|
|
T |
14012605 |
gtccccgtgagcatagttcagttggcagggacaatgcattgttatatgcaggggccggggttc |
14012667 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #9
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 363 - 429
Target Start/End: Original strand, 29937204 - 29937270
Alignment:
Q |
363 |
gtccccgtgagtctagctcagctggcagggacatgcattgttatatgccggggctggggttcaaacc |
429 |
Q |
|
|
||||||||||| |||||||| ||| ||||||||| |||||||||||| ||||| || |||| |||| |
|
|
T |
29937204 |
gtccccgtgagcatagctcagttggtagggacatgtattgttatatgcaggggccggagttcgaacc |
29937270 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #10
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 370 - 416
Target Start/End: Complemental strand, 39208955 - 39208909
Alignment:
Q |
370 |
tgagtctagctcagctggcagggacatgcattgttatatgccggggc |
416 |
Q |
|
|
|||||||||||||| | ||||||||||||||| |||||||| ||||| |
|
|
T |
39208955 |
tgagtctagctcagtttgcagggacatgcattattatatgcaggggc |
39208909 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #11
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 363 - 431
Target Start/End: Original strand, 2696526 - 2696595
Alignment:
Q |
363 |
gtccccgtgagtctagctcagctggcagggac-atgcattgttatatgccggggctggggttcaaacccc |
431 |
Q |
|
|
||||||||||| || ||||| |||||||||| ||||||| |||||||| ||||| ||||||| |||||| |
|
|
T |
2696526 |
gtccccgtgagcataactcagttggcagggacaatgcattattatatgcaggggccggggttcgaacccc |
2696595 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #12
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 363 - 432
Target Start/End: Complemental strand, 24572952 - 24572883
Alignment:
Q |
363 |
gtccccgtgagtctagctcagctggcagggacatgcattgttatatgccggggctggggttcaaacccca |
432 |
Q |
|
|
||||||||||| |||||||| |||||| |||||| || |||||||| | ||| ||||||||||||||| |
|
|
T |
24572952 |
gtccccgtgagcatagctcagttggcagagacatgtatcgttatatgtagaggccggggttcaaacccca |
24572883 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #13
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 363 - 432
Target Start/End: Complemental strand, 41793073 - 41793005
Alignment:
Q |
363 |
gtccccgtgagtctagctcagctggcagggacatgcattgttatatgccggggctggggttcaaacccca |
432 |
Q |
|
|
||||||||||| ||||||| ||||||| |||||||||||||||||| || || ||||||| ||||||| |
|
|
T |
41793073 |
gtccccgtgagcatagctcaattggcagg-acatgcattgttatatgcaggagccggggttcgaacccca |
41793005 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #14
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 366 - 410
Target Start/End: Complemental strand, 216245 - 216201
Alignment:
Q |
366 |
cccgtgagtctagctcagctggcagggacatgcattgttatatgc |
410 |
Q |
|
|
|||||||| |||||||| |||||||||||| ||||||||||||| |
|
|
T |
216245 |
cccgtgagcatagctcagttggcagggacatacattgttatatgc |
216201 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #15
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 366 - 410
Target Start/End: Complemental strand, 220460 - 220416
Alignment:
Q |
366 |
cccgtgagtctagctcagctggcagggacatgcattgttatatgc |
410 |
Q |
|
|
|||||||| |||||||| ||||||||||||||| |||||||||| |
|
|
T |
220460 |
cccgtgagcatagctcagttggcagggacatgcaatgttatatgc |
220416 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #16
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 366 - 410
Target Start/End: Complemental strand, 689615 - 689571
Alignment:
Q |
366 |
cccgtgagtctagctcagctggcagggacatgcattgttatatgc |
410 |
Q |
|
|
|||||||| |||||||| ||||||||||||||| |||||||||| |
|
|
T |
689615 |
cccgtgagcatagctcagttggcagggacatgcaatgttatatgc |
689571 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #17
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 366 - 410
Target Start/End: Complemental strand, 692805 - 692761
Alignment:
Q |
366 |
cccgtgagtctagctcagctggcagggacatgcattgttatatgc |
410 |
Q |
|
|
|||||||| |||||||| |||||||||||| ||||||||||||| |
|
|
T |
692805 |
cccgtgagcatagctcagttggcagggacatacattgttatatgc |
692761 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #18
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 366 - 410
Target Start/End: Complemental strand, 697014 - 696970
Alignment:
Q |
366 |
cccgtgagtctagctcagctggcagggacatgcattgttatatgc |
410 |
Q |
|
|
|||||||| |||||||| |||||||||||| ||||||||||||| |
|
|
T |
697014 |
cccgtgagcatagctcagttggcagggacatacattgttatatgc |
696970 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #19
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 366 - 410
Target Start/End: Complemental strand, 729868 - 729824
Alignment:
Q |
366 |
cccgtgagtctagctcagctggcagggacatgcattgttatatgc |
410 |
Q |
|
|
|||||||| |||||||| |||||||||||| ||||||||||||| |
|
|
T |
729868 |
cccgtgagcatagctcagttggcagggacatacattgttatatgc |
729824 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #20
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 366 - 410
Target Start/End: Complemental strand, 734083 - 734039
Alignment:
Q |
366 |
cccgtgagtctagctcagctggcagggacatgcattgttatatgc |
410 |
Q |
|
|
|||||||| |||||||| ||||||||||||||| |||||||||| |
|
|
T |
734083 |
cccgtgagcatagctcagttggcagggacatgcaatgttatatgc |
734039 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #21
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 366 - 410
Target Start/End: Complemental strand, 853763 - 853719
Alignment:
Q |
366 |
cccgtgagtctagctcagctggcagggacatgcattgttatatgc |
410 |
Q |
|
|
|||||||| |||||||| |||||||||||| ||||||||||||| |
|
|
T |
853763 |
cccgtgagcatagctcagttggcagggacatacattgttatatgc |
853719 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #22
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 366 - 410
Target Start/End: Complemental strand, 857979 - 857935
Alignment:
Q |
366 |
cccgtgagtctagctcagctggcagggacatgcattgttatatgc |
410 |
Q |
|
|
|||||||| |||||||| ||||||||||||||| |||||||||| |
|
|
T |
857979 |
cccgtgagcatagctcagttggcagggacatgcaatgttatatgc |
857935 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #23
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 363 - 418
Target Start/End: Original strand, 10292345 - 10292401
Alignment:
Q |
363 |
gtccccgtgagtctagctcagctggcagggac-atgcattgttatatgccggggctg |
418 |
Q |
|
|
||||||||||| |||||||| |||||||||| ||||||| |||||||| ||||||| |
|
|
T |
10292345 |
gtccccgtgagcatagctcagttggcagggacaatgcattattatatgcaggggctg |
10292401 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #24
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 395 - 431
Target Start/End: Original strand, 10970292 - 10970328
Alignment:
Q |
395 |
atgcattgttatatgccggggctggggttcaaacccc |
431 |
Q |
|
|
||||||| |||||||| |||||||||||||||||||| |
|
|
T |
10970292 |
atgcattattatatgcaggggctggggttcaaacccc |
10970328 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5 (Bit Score: 39; Significance: 0.0000000000006; HSPs: 12)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 363 - 424
Target Start/End: Original strand, 9963409 - 9963471
Alignment:
Q |
363 |
gtccccgtgagtctagctcagctggcagggac-atgcattgttatatgccggggctggggttc |
424 |
Q |
|
|
|||||||||||| |||||||| |||||||||| |||||||||||||||| |||| |||||||| |
|
|
T |
9963409 |
gtccccgtgagtatagctcagttggcagggacaatgcattgttatatgcaggggttggggttc |
9963471 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #2
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 367 - 432
Target Start/End: Complemental strand, 11246591 - 11246526
Alignment:
Q |
367 |
ccgtgagtctagctcagctggcagggacatgcattgttatatgccggggctggggttcaaacccca |
432 |
Q |
|
|
||||||| |||||||| |||||||||||||||||||||||||| |||| |||| |||||||||| |
|
|
T |
11246591 |
ccgtgagcatagctcagttggcagggacatgcattgttatatgcaggggtcggggctcaaacccca |
11246526 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #3
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 363 - 432
Target Start/End: Original strand, 25660906 - 25660975
Alignment:
Q |
363 |
gtccccgtgagtctagctcagctggcagggacatgcattgttatatgccggggctggggttcaaacccca |
432 |
Q |
|
|
||||||||||| |||||||| ||||||||| |||||||||||||||| ||||| ||| ||| ||||||| |
|
|
T |
25660906 |
gtccccgtgagcatagctcagttggcagggatatgcattgttatatgcaggggccgggattcgaacccca |
25660975 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #4
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 363 - 430
Target Start/End: Original strand, 17557024 - 17557091
Alignment:
Q |
363 |
gtccccgtgagtctagctcagctggcagggacatgcattgttatatgccggggctggggttcaaaccc |
430 |
Q |
|
|
||||||||||| ||| ||||| |||||| |||||||||||||||||| |||| ||||||||||||| |
|
|
T |
17557024 |
gtccccgtgagcctaactcagttggcagagacatgcattgttatatgtaggggtcggggttcaaaccc |
17557091 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #5
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 364 - 430
Target Start/End: Complemental strand, 35813342 - 35813276
Alignment:
Q |
364 |
tccccgtgagtctagctcagctggcagggacatgcattgttatatgccggggctggggttcaaaccc |
430 |
Q |
|
|
|||||||||| |||||||| || ||||||||||||||||||||||| |||||| ||||| ||||| |
|
|
T |
35813342 |
tccccgtgagcatagctcagttgacagggacatgcattgttatatgcaggggctcaggttcgaaccc |
35813276 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #6
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 362 - 415
Target Start/End: Original strand, 38040259 - 38040312
Alignment:
Q |
362 |
ggtccccgtgagtctagctcagctggcagggacatgcattgttatatgccgggg |
415 |
Q |
|
|
||||||| |||| |||||||| |||||||||||||||||||||||||| |||| |
|
|
T |
38040259 |
ggtccccatgagcatagctcagttggcagggacatgcattgttatatgcagggg |
38040312 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #7
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 363 - 431
Target Start/End: Complemental strand, 3536037 - 3535969
Alignment:
Q |
363 |
gtccccgtgagtctagctcagctggcagggacatgcattgttatatgccggggctggggttcaaacccc |
431 |
Q |
|
|
||||||||||| ||| |||| |||||||||||||||||||||||| | || || ||||||| |||||| |
|
|
T |
3536037 |
gtccccgtgagcatagttcagttggcagggacatgcattgttatatacaggagccggggttcgaacccc |
3535969 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #8
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 388 - 428
Target Start/End: Original strand, 31292548 - 31292588
Alignment:
Q |
388 |
cagggacatgcattgttatatgccggggctggggttcaaac |
428 |
Q |
|
|
||||||||||||||||||||||| || |||||||||||||| |
|
|
T |
31292548 |
cagggacatgcattgttatatgcaggagctggggttcaaac |
31292588 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #9
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 376 - 431
Target Start/End: Complemental strand, 42781682 - 42781627
Alignment:
Q |
376 |
tagctcagctggcagggacatgcattgttatatgccggggctggggttcaaacccc |
431 |
Q |
|
|
|||||||| |||||||||||||||||||||||||| ||| ||||||| |||||| |
|
|
T |
42781682 |
tagctcagttggcagggacatgcattgttatatgcagggttcggggttcgaacccc |
42781627 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #10
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 363 - 431
Target Start/End: Original strand, 1463864 - 1463933
Alignment:
Q |
363 |
gtccccgtgagtctagctcagctggcagggac-atgcattgttatatgccggggctggggttcaaacccc |
431 |
Q |
|
|
||||| ||||| |||||||| |||||||||| ||||||| |||||||| ||||| ||||||| |||||| |
|
|
T |
1463864 |
gtccctgtgagcatagctcagttggcagggacaatgcattattatatgcaggggccggggttcgaacccc |
1463933 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #11
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 369 - 406
Target Start/End: Complemental strand, 25824116 - 25824079
Alignment:
Q |
369 |
gtgagtctagctcagctggcagggacatgcattgttat |
406 |
Q |
|
|
|||||| ||||||||||| ||||||||||||||||||| |
|
|
T |
25824116 |
gtgagtatagctcagctgtcagggacatgcattgttat |
25824079 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #12
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 363 - 424
Target Start/End: Original strand, 27006334 - 27006395
Alignment:
Q |
363 |
gtccccgtgagtctagctcagctggcagggacatgcattgttatatgccggggctggggttc |
424 |
Q |
|
|
||||||||||| ||| |||| |||||||| ||||||||||||||||| |||| ||||||| |
|
|
T |
27006334 |
gtccccgtgagcataggtcagatggcaggggcatgcattgttatatgctggggtcggggttc |
27006395 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7 (Bit Score: 38; Significance: 0.000000000003; HSPs: 20)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 363 - 431
Target Start/End: Complemental strand, 21285455 - 21285386
Alignment:
Q |
363 |
gtccccgtgagtctagctcagctggcagggaca-tgcattgttatatgccggggctggggttcaaacccc |
431 |
Q |
|
|
||||||||||| |||||||| ||||||||||| ||||||||||||||| ||||| ||||||| |||||| |
|
|
T |
21285455 |
gtccccgtgagcatagctcagttggcagggacaatgcattgttatatgcaggggccggggttcgaacccc |
21285386 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #2
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 363 - 431
Target Start/End: Original strand, 35195837 - 35195905
Alignment:
Q |
363 |
gtccccgtgagtctagctcagctggcagggacatgcattgttatatgccggggctggggttcaaacccc |
431 |
Q |
|
|
|||||||| || |||||||| ||||||||||||||||| |||||||| ||||| ||||||| |||||| |
|
|
T |
35195837 |
gtccccgtaagcatagctcagttggcagggacatgcattattatatgcaggggccggggttcgaacccc |
35195905 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #3
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 376 - 431
Target Start/End: Complemental strand, 10020557 - 10020502
Alignment:
Q |
376 |
tagctcagctggcagggacatgcattgttatatgccggggctggggttcaaacccc |
431 |
Q |
|
|
|||||||| || ||||||||||||||||||||||| |||| |||||||| |||||| |
|
|
T |
10020557 |
tagctcagttgacagggacatgcattgttatatgcaggggttggggttcgaacccc |
10020502 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #4
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 363 - 432
Target Start/End: Complemental strand, 14818467 - 14818397
Alignment:
Q |
363 |
gtccccgtgagtctagctcagctggcagggaca-tgcattgttatatgccggggctggggttcaaacccca |
432 |
Q |
|
|
||||||||||| |||||||| ||||||||||| |||||| |||||||| |||| ||||||||||||||| |
|
|
T |
14818467 |
gtccccgtgagcatagctcagttggcagggacagtgcattattatatgcaggggtcggggttcaaacccca |
14818397 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #5
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 363 - 432
Target Start/End: Complemental strand, 15265465 - 15265395
Alignment:
Q |
363 |
gtccccgtgagtctagctcagctggcagggaca-tgcattgttatatgccggggctggggttcaaacccca |
432 |
Q |
|
|
||||||||||| |||||||| ||||||||||| |||||| |||||||| |||| ||||||||||||||| |
|
|
T |
15265465 |
gtccccgtgagcatagctcagttggcagggacagtgcattattatatgcaggggtcggggttcaaacccca |
15265395 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #6
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 366 - 431
Target Start/End: Complemental strand, 31475939 - 31475873
Alignment:
Q |
366 |
cccgtgagtctagctcagctggcagggacat-gcattgttatatgccggggctggggttcaaacccc |
431 |
Q |
|
|
|||||||| |||||||| |||||||||||| ||||| |||||||| ||||||||||||| |||||| |
|
|
T |
31475939 |
cccgtgagcatagctcagttggcagggacattgcattattatatgcaggggctggggttcgaacccc |
31475873 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #7
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 363 - 431
Target Start/End: Complemental strand, 20527531 - 20527462
Alignment:
Q |
363 |
gtccccgtgagtctagctcagctggcagggaca-tgcattgttatatgccggggctggggttcaaacccc |
431 |
Q |
|
|
||||| |||||| |||||||| ||||||||||| ||||||||||||||| ||||| || |||| |||||| |
|
|
T |
20527531 |
gtccctgtgagtatagctcagttggcagggacaatgcattgttatatgcaggggccggagttcgaacccc |
20527462 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #8
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 376 - 432
Target Start/End: Complemental strand, 37995633 - 37995578
Alignment:
Q |
376 |
tagctcagctggcagggacatgcattgttatatgccggggctggggttcaaacccca |
432 |
Q |
|
|
|||||||| |||||| ||||||||| ||||||||| ||||| ||||||||||||||| |
|
|
T |
37995633 |
tagctcagttggcagagacatgcat-gttatatgcaggggccggggttcaaacccca |
37995578 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #9
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 379 - 431
Target Start/End: Complemental strand, 38032940 - 38032888
Alignment:
Q |
379 |
ctcagctggcagggacatgcattgttatatgccggggctggggttcaaacccc |
431 |
Q |
|
|
||||| |||||||||||||||||||||||| | ||||| ||||||| |||||| |
|
|
T |
38032940 |
ctcagttggcagggacatgcattgttatatacaggggccggggttcgaacccc |
38032888 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #10
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 363 - 431
Target Start/End: Original strand, 48174961 - 48175029
Alignment:
Q |
363 |
gtccccgtgagtctagctcagctggcagggacatgcattgttatatgccggggctggggttcaaacccc |
431 |
Q |
|
|
|||||||||||| |||||||| ||||| ||||||||||| |||||| | ||||| || |||| |||||| |
|
|
T |
48174961 |
gtccccgtgagtatagctcagttggcaaggacatgcattattatatacaggggccggtgttcgaacccc |
48175029 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #11
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 367 - 410
Target Start/End: Complemental strand, 17305487 - 17305444
Alignment:
Q |
367 |
ccgtgagtctagctcagctggcagggacatgcattgttatatgc |
410 |
Q |
|
|
||||||| |||||||| |||||||||||||||||||||||||| |
|
|
T |
17305487 |
ccgtgagcatagctcagttggcagggacatgcattgttatatgc |
17305444 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #12
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 363 - 430
Target Start/End: Original strand, 37917386 - 37917453
Alignment:
Q |
363 |
gtccccgtgagtctagctcagctggcagggacatgcattgttatatgccggggctggggttcaaaccc |
430 |
Q |
|
|
||||||||||| |||||||| ||| ||| |||||||| |||||||| |||| |||||||||||||| |
|
|
T |
37917386 |
gtccccgtgagcatagctcagttggtaggaacatgcataattatatgcaggggttggggttcaaaccc |
37917453 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #13
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 366 - 431
Target Start/End: Original strand, 11808035 - 11808100
Alignment:
Q |
366 |
cccgtgagtctagctcagctggcagggacatgcattgttatatgccggggctggggttcaaacccc |
431 |
Q |
|
|
|||||||| ||||||| ||| |||||||||||||||||||||| |||| ||||||| |||||| |
|
|
T |
11808035 |
cccgtgagcttagctcaattggtagggacatgcattgttatatgcaggggtcggggttcgaacccc |
11808100 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #14
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 363 - 431
Target Start/End: Complemental strand, 29658374 - 29658305
Alignment:
Q |
363 |
gtccccgtgagtctagctcagctggcagggaca-tgcattgttatatgccggggctggggttcaaacccc |
431 |
Q |
|
|
||||||||||| ||||||| |||||| |||| ||||||||||||||| ||||| ||||||| |||||| |
|
|
T |
29658374 |
gtccccgtgagcatagctcaattggcagcgacaatgcattgttatatgcaggggccggggttcgaacccc |
29658305 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #15
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 363 - 423
Target Start/End: Complemental strand, 7392407 - 7392347
Alignment:
Q |
363 |
gtccccgtgagtctagctcagctggcagggacatgcattgttatatgccggggctggggtt |
423 |
Q |
|
|
||||||||||| ||||||| ||||||| |||||||||||||||||| | || ||||||| |
|
|
T |
7392407 |
gtccccgtgagcatagctcaattggcaggaacatgcattgttatatgcagaggttggggtt |
7392347 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #16
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 366 - 430
Target Start/End: Complemental strand, 14772433 - 14772369
Alignment:
Q |
366 |
cccgtgagtctagctcagctggcagggacatgcattgttatatgccggggctggggttcaaaccc |
430 |
Q |
|
|
|||||||| || ||||| |||||| |||||||||||||| ||| ||||| ||||||||||||| |
|
|
T |
14772433 |
cccgtgagcataactcagttggcagagacatgcattgttacatgtaggggccggggttcaaaccc |
14772369 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #17
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 366 - 430
Target Start/End: Complemental strand, 15222885 - 15222821
Alignment:
Q |
366 |
cccgtgagtctagctcagctggcagggacatgcattgttatatgccggggctggggttcaaaccc |
430 |
Q |
|
|
|||||||| || ||||| |||||| |||||||||||||| ||| ||||| ||||||||||||| |
|
|
T |
15222885 |
cccgtgagcataactcagttggcagagacatgcattgttacatgtaggggccggggttcaaaccc |
15222821 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #18
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 363 - 430
Target Start/End: Original strand, 15912768 - 15912836
Alignment:
Q |
363 |
gtccccgtgagtctagctcagctggcagggaca-tgcattgttatatgccggggctggggttcaaaccc |
430 |
Q |
|
|
||||||||||| ||||||| ||||||| ||| ||||||||||||||| |||| |||||||| ||||| |
|
|
T |
15912768 |
gtccccgtgagaatagctcaattggcaggaacaatgcattgttatatgcaggggttggggttcgaaccc |
15912836 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #19
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 361 - 424
Target Start/End: Original strand, 41139078 - 41139142
Alignment:
Q |
361 |
tggtccccgtgagtctagctcagctggcagggac-atgcattgttatatgccggggctggggttc |
424 |
Q |
|
|
||||||||||||| |||||||| |||||||||| ||||||| |||||||| |||| ||||||| |
|
|
T |
41139078 |
tggtccccgtgagcatagctcagttggcagggacaatgcattattatatgcaggggtcggggttc |
41139142 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #20
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 388 - 432
Target Start/End: Original strand, 47355828 - 47355872
Alignment:
Q |
388 |
cagggacatgcattgttatatgccggggctggggttcaaacccca |
432 |
Q |
|
|
|||||| |||||||||||||||| ||||| ||||||| ||||||| |
|
|
T |
47355828 |
cagggatatgcattgttatatgcaggggccggggttcgaacccca |
47355872 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0126 (Bit Score: 36; Significance: 0.00000000004; HSPs: 1)
Name: scaffold0126
Description:
Target: scaffold0126; HSP #1
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 363 - 430
Target Start/End: Complemental strand, 25062 - 24995
Alignment:
Q |
363 |
gtccccgtgagtctagctcagctggcagggacatgcattgttatatgccggggctggggttcaaaccc |
430 |
Q |
|
|
||||||||||| || ||||| |||||| |||||||| |||||||||| ||||| ||||||||||||| |
|
|
T |
25062 |
gtccccgtgagcatatctcagttggcagagacatgcaatgttatatgcaggggccggggttcaaaccc |
24995 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0112 (Bit Score: 35; Significance: 0.0000000002; HSPs: 1)
Name: scaffold0112
Description:
Target: scaffold0112; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 363 - 432
Target Start/End: Complemental strand, 18033 - 17963
Alignment:
Q |
363 |
gtccccgtgagtctagctcagctggcagggaca-tgcattgttatatgccggggctggggttcaaacccca |
432 |
Q |
|
|
||||||||||| ||||||| ||| ||||||| ||||||||||||||| ||||||||||||| ||||||| |
|
|
T |
18033 |
gtccccgtgagcatagctcaattggtagggacaatgcattgttatatgcaggggctggggttcgaacccca |
17963 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2 (Bit Score: 35; Significance: 0.0000000002; HSPs: 12)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 376 - 430
Target Start/End: Complemental strand, 35352498 - 35352444
Alignment:
Q |
376 |
tagctcagctggcagggacatgcattgttatatgccggggctggggttcaaaccc |
430 |
Q |
|
|
|||||||| |||||||||||||||| |||||||| ||||||||||||| ||||| |
|
|
T |
35352498 |
tagctcagttggcagggacatgcataattatatgcgggggctggggttcgaaccc |
35352444 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #2
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 380 - 431
Target Start/End: Complemental strand, 26975382 - 26975331
Alignment:
Q |
380 |
tcagctggcagggacatgcattgttatatgccggggctggggttcaaacccc |
431 |
Q |
|
|
|||| |||||||||||||||||| ||||||| | ||||||||||| |||||| |
|
|
T |
26975382 |
tcagttggcagggacatgcattgctatatgcagaggctggggttcgaacccc |
26975331 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #3
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 363 - 409
Target Start/End: Complemental strand, 36277803 - 36277757
Alignment:
Q |
363 |
gtccccgtgagtctagctcagctggcagggacatgcattgttatatg |
409 |
Q |
|
|
||||||||||| |||||||| |||||| |||||||||||||||||| |
|
|
T |
36277803 |
gtccccgtgagcatagctcagttggcagtgacatgcattgttatatg |
36277757 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #4
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 366 - 424
Target Start/End: Complemental strand, 39334979 - 39334921
Alignment:
Q |
366 |
cccgtgagtctagctcagctggcagggacatgcattgttatatgccggggctggggttc |
424 |
Q |
|
|
|||||||| || ||||| ||||||||||||||||| |||||| | ||||||||||||| |
|
|
T |
39334979 |
cccgtgagcataactcagttggcagggacatgcattattatatacaggggctggggttc |
39334921 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #5
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 363 - 431
Target Start/End: Original strand, 11133069 - 11133138
Alignment:
Q |
363 |
gtccccgtgagtctagctcagctggcagggaca-tgcattgttatatgccggggctggggttcaaacccc |
431 |
Q |
|
|
||||||||||| |||||||| ||| ||||||| ||||||||||||||| |||| ||||||| |||||| |
|
|
T |
11133069 |
gtccccgtgagcatagctcagttggtagggacaatgcattgttatatgcaggggtcggggttcgaacccc |
11133138 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #6
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 363 - 431
Target Start/End: Original strand, 29034969 - 29035038
Alignment:
Q |
363 |
gtccccgtgagtctagctcagctggcagggac-atgcattgttatatgccggggctggggttcaaacccc |
431 |
Q |
|
|
||||||||||| ||||||| |||||||||| ||||||| |||||||| ||||| ||||||| |||||| |
|
|
T |
29034969 |
gtccccgtgagcatagctcacttggcagggacaatgcattattatatgcaggggccggggttcgaacccc |
29035038 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #7
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 363 - 427
Target Start/End: Original strand, 29664596 - 29664661
Alignment:
Q |
363 |
gtccccgtgagtctagctcagctggcagggaca-tgcattgttatatgccggggctggggttcaaa |
427 |
Q |
|
|
||||||||||| ||||||| ||||||||||| ||||||||||||||| |||| |||||||||| |
|
|
T |
29664596 |
gtccccgtgagcatagctcaattggcagggacaatgcattgttatatgcaggggtcggggttcaaa |
29664661 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #8
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 376 - 432
Target Start/End: Complemental strand, 32527166 - 32527109
Alignment:
Q |
376 |
tagctcagctggcagggac-atgcattgttatatgccggggctggggttcaaacccca |
432 |
Q |
|
|
|||||||| |||||||||| ||||||| |||||||| ||||| ||||||| ||||||| |
|
|
T |
32527166 |
tagctcagttggcagggacaatgcattattatatgcaggggccggggttcgaacccca |
32527109 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #9
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 362 - 431
Target Start/End: Complemental strand, 44487869 - 44487800
Alignment:
Q |
362 |
ggtccccgtgagtctagctcagctggcagggacatgcattgttatatgccggggctggggttcaaacccc |
431 |
Q |
|
|
||||||||||||| |||||||| || ||||||||||||| |||||||| |||| || |||| |||||| |
|
|
T |
44487869 |
ggtccccgtgagtatagctcagttgatagggacatgcattattatatgcaagggccggagttcgaacccc |
44487800 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #10
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 363 - 415
Target Start/End: Original strand, 5772854 - 5772906
Alignment:
Q |
363 |
gtccccgtgagtctagctcagctggcagggacatgcattgttatatgccgggg |
415 |
Q |
|
|
||||||||||| |||||||| ||||| ||||||| |||||||||||| |||| |
|
|
T |
5772854 |
gtccccgtgagcatagctcagttggcaaggacatgtattgttatatgcagggg |
5772906 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #11
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 376 - 428
Target Start/End: Original strand, 17896832 - 17896884
Alignment:
Q |
376 |
tagctcagctggcagggacatgcattgttatatgccggggctggggttcaaac |
428 |
Q |
|
|
|||||||| |||||||||||||||| |||||| | |||| |||||||||||| |
|
|
T |
17896832 |
tagctcagttggcagggacatgcataattatatacaggggttggggttcaaac |
17896884 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #12
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 363 - 415
Target Start/End: Original strand, 22355077 - 22355129
Alignment:
Q |
363 |
gtccccgtgagtctagctcagctggcagggacatgcattgttatatgccgggg |
415 |
Q |
|
|
||||||||||| |||||||| ||||| |||||||||||||||| ||| |||| |
|
|
T |
22355077 |
gtccccgtgagcatagctcagttggcaaggacatgcattgttatgtgcagggg |
22355129 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0119 (Bit Score: 34; Significance: 0.0000000006; HSPs: 1)
Name: scaffold0119
Description:
Target: scaffold0119; HSP #1
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 363 - 432
Target Start/End: Original strand, 1033 - 1102
Alignment:
Q |
363 |
gtccccgtgagtctagctcagctggcagggacatgcattgttatatgccggggctggggttcaaacccca |
432 |
Q |
|
|
||||||||||| |||||||| ||| |||||||||||| ||||||| ||||||||||||| ||||||| |
|
|
T |
1033 |
gtccccgtgagcatagctcagttggtagggacatgcataattatatgtaggggctggggttcgaacccca |
1102 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0712 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0712
Description:
Target: scaffold0712; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 367 - 415
Target Start/End: Original strand, 4518 - 4566
Alignment:
Q |
367 |
ccgtgagtctagctcagctggcagggacatgcattgttatatgccgggg |
415 |
Q |
|
|
||||||| |||||||| |||||||||||||||||||||||||| |||| |
|
|
T |
4518 |
ccgtgagcatagctcagttggcagggacatgcattgttatatgcagggg |
4566 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0709 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0709
Description:
Target: scaffold0709; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 367 - 415
Target Start/End: Original strand, 4538 - 4586
Alignment:
Q |
367 |
ccgtgagtctagctcagctggcagggacatgcattgttatatgccgggg |
415 |
Q |
|
|
||||||| |||||||| |||||||||||||||||||||||||| |||| |
|
|
T |
4538 |
ccgtgagcatagctcagttggcagggacatgcattgttatatgcagggg |
4586 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0054 (Bit Score: 31; Significance: 0.00000004; HSPs: 1)
Name: scaffold0054
Description:
Target: scaffold0054; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 376 - 430
Target Start/End: Original strand, 67168 - 67222
Alignment:
Q |
376 |
tagctcagctggcagggacatgcattgttatatgccggggctggggttcaaaccc |
430 |
Q |
|
|
|||||||| ||| ||||| ||||||||||||||| ||||||||||||| ||||| |
|
|
T |
67168 |
tagctcagttgggagggatatgcattgttatatgtaggggctggggttcgaaccc |
67222 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold1808 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold1808
Description:
Target: scaffold1808; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 363 - 432
Target Start/End: Complemental strand, 934 - 865
Alignment:
Q |
363 |
gtccccgtgagtctagctcagctggcagggacatgcattgttatatgccggggctggggttcaaacccca |
432 |
Q |
|
|
||||||||||| || ||||| || ||||||||| ||||||||||||| | ||| || |||||||||||| |
|
|
T |
934 |
gtccccgtgagcataactcagttgtcagggacatacattgttatatgcagaggccggagttcaaacccca |
865 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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