View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: 108_9_85 (Length: 537)

Name: 108_9_85
Description: Pascalseqs
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] 108_9_85
108_9_85
[»] chr5 (59 HSPs)
chr5 (1-366)||(33806561-33806926)
chr5 (361-514)||(33816789-33816942)
chr5 (400-535)||(33818571-33818706)
chr5 (401-531)||(23423770-23423900)
chr5 (400-535)||(618288-618423)
chr5 (400-535)||(16121849-16121984)
chr5 (420-537)||(25397796-25397913)
chr5 (406-535)||(17039641-17039770)
chr5 (400-535)||(2472724-2472859)
chr5 (400-535)||(35620354-35620488)
chr5 (401-535)||(23975630-23975764)
chr5 (420-535)||(746878-746993)
chr5 (400-535)||(7888791-7888926)
chr5 (400-535)||(8108870-8109005)
chr5 (400-535)||(8886861-8886996)
chr5 (400-535)||(12045721-12045856)
chr5 (400-535)||(12328236-12328371)
chr5 (400-535)||(15060967-15061102)
chr5 (400-535)||(36196388-36196523)
chr5 (400-535)||(25652593-25652728)
chr5 (400-529)||(17986723-17986852)
chr5 (400-529)||(25673245-25673373)
chr5 (401-529)||(13620143-13620271)
chr5 (401-529)||(20959503-20959631)
chr5 (416-535)||(26708595-26708714)
chr5 (416-535)||(26978329-26978448)
chr5 (401-529)||(27428028-27428156)
chr5 (420-535)||(38837681-38837796)
chr5 (406-530)||(7003745-7003867)
chr5 (420-520)||(10494751-10494851)
chr5 (400-535)||(17036422-17036557)
chr5 (401-529)||(28265491-28265619)
chr5 (400-535)||(36831900-36832035)
chr5 (406-535)||(23408980-23409110)
chr5 (400-535)||(5982639-5982775)
chr5 (401-530)||(10420267-10420396)
chr5 (420-529)||(16631890-16631999)
chr5 (400-503)||(17079399-17079502)
chr5 (400-535)||(11927796-11927931)
chr5 (416-535)||(24138851-24138970)
chr5 (420-535)||(36597350-36597465)
chr5 (420-529)||(4125204-4125313)
chr5 (420-529)||(17771984-17772093)
chr5 (400-535)||(13974088-13974223)
chr5 (401-535)||(20187951-20188085)
chr5 (406-536)||(32726735-32726865)
chr5 (400-537)||(3080704-3080841)
chr5 (400-537)||(33734981-33735117)
chr5 (400-530)||(36716215-36716345)
chr5 (420-529)||(40484058-40484167)
chr5 (420-529)||(35778155-35778264)
chr5 (418-537)||(23974584-23974703)
chr5 (400-514)||(18413550-18413664)
chr5 (425-502)||(31853131-31853208)
chr5 (420-514)||(9024227-9024322)
chr5 (400-463)||(29727928-29727991)
chr5 (401-502)||(16472223-16472325)
chr5 (412-514)||(5043542-5043644)
chr5 (420-463)||(16464692-16464735)
[»] chr3 (87 HSPs)
chr3 (407-537)||(19610335-19610465)
chr3 (400-537)||(16299851-16299988)
chr3 (400-537)||(29215982-29216119)
chr3 (400-537)||(30219328-30219465)
chr3 (420-537)||(15064000-15064117)
chr3 (400-535)||(18104540-18104675)
chr3 (400-535)||(19269874-19270009)
chr3 (400-535)||(27449078-27449213)
chr3 (406-535)||(5260933-5261062)
chr3 (400-530)||(17762632-17762762)
chr3 (400-530)||(19063952-19064082)
chr3 (406-535)||(25882566-25882695)
chr3 (400-529)||(8428161-8428290)
chr3 (400-529)||(49915441-49915570)
chr3 (400-535)||(11915748-11915883)
chr3 (400-535)||(18091557-18091692)
chr3 (420-537)||(5744426-5744543)
chr3 (420-537)||(5781385-5781502)
chr3 (406-535)||(19223445-19223574)
chr3 (400-537)||(21020055-21020192)
chr3 (400-514)||(17582332-17582446)
chr3 (400-535)||(8110329-8110464)
chr3 (400-535)||(18539794-18539929)
chr3 (420-535)||(26098823-26098938)
chr3 (400-535)||(26390644-26390779)
chr3 (416-535)||(48404866-48404985)
chr3 (401-535)||(11007693-11007827)
chr3 (400-529)||(29956362-29956491)
chr3 (400-529)||(30005517-30005646)
chr3 (420-536)||(50665645-50665761)
chr3 (400-535)||(4393360-4393495)
chr3 (400-535)||(9652568-9652703)
chr3 (416-535)||(13921331-13921450)
chr3 (406-514)||(19545506-19545614)
chr3 (418-535)||(10941675-10941792)
chr3 (400-529)||(26830457-26830587)
chr3 (436-537)||(37283549-37283650)
chr3 (407-535)||(1310969-1311097)
chr3 (416-529)||(21816727-21816840)
chr3 (400-529)||(36543739-36543868)
chr3 (401-529)||(1628206-1628334)
chr3 (401-514)||(28389964-28390077)
chr3 (409-535)||(31250087-31250213)
chr3 (416-536)||(21088758-21088876)
chr3 (400-529)||(7623547-7623676)
chr3 (400-529)||(31433727-31433856)
chr3 (409-530)||(46942486-46942607)
chr3 (420-535)||(1745498-1745612)
chr3 (420-535)||(3461320-3461435)
chr3 (406-530)||(11219134-11219258)
chr3 (410-530)||(11837229-11837349)
chr3 (420-535)||(13905048-13905163)
chr3 (416-535)||(29236050-29236169)
chr3 (400-535)||(29704042-29704177)
chr3 (420-530)||(23773487-23773597)
chr3 (400-529)||(23217224-23217353)
chr3 (400-514)||(27212812-27212926)
chr3 (416-529)||(28859597-28859710)
chr3 (400-529)||(36564455-36564584)
chr3 (420-535)||(5565732-5565847)
chr3 (400-535)||(27968905-27969040)
chr3 (420-535)||(43329773-43329888)
chr3 (420-535)||(46012738-46012853)
chr3 (416-535)||(47263275-47263394)
chr3 (408-530)||(27182673-27182793)
chr3 (423-514)||(6718723-6718814)
chr3 (401-530)||(8543460-8543588)
chr3 (400-503)||(11085384-11085487)
chr3 (406-528)||(10803716-10803839)
chr3 (430-535)||(8546265-8546370)
chr3 (420-503)||(17269646-17269729)
chr3 (400-529)||(18380014-18380143)
chr3 (420-530)||(21490049-21490159)
chr3 (408-502)||(20088398-20088492)
chr3 (401-535)||(15490026-15490159)
chr3 (456-535)||(20761960-20762039)
chr3 (400-530)||(29451084-29451214)
chr3 (400-529)||(20615359-20615488)
chr3 (420-535)||(6088238-6088353)
chr3 (400-537)||(6447254-6447391)
chr3 (416-529)||(10772069-10772183)
chr3 (420-514)||(50240756-50240850)
chr3 (420-494)||(23233214-23233288)
chr3 (410-530)||(26963264-26963384)
chr3 (416-465)||(35579605-35579654)
chr3 (428-476)||(27711237-27711285)
chr3 (416-531)||(45304340-45304455)
[»] chr6 (74 HSPs)
chr6 (400-537)||(22083832-22083969)
chr6 (400-537)||(12951702-12951839)
chr6 (400-537)||(18033534-18033670)
chr6 (400-535)||(9892957-9893092)
chr6 (400-537)||(2992609-2992746)
chr6 (420-529)||(11077663-11077772)
chr6 (400-535)||(6598458-6598593)
chr6 (400-535)||(15364468-15364603)
chr6 (400-535)||(24661019-24661154)
chr6 (401-529)||(25397997-25398125)
chr6 (400-535)||(28364905-28365040)
chr6 (400-535)||(12200688-12200823)
chr6 (400-535)||(14886555-14886690)
chr6 (400-535)||(22579359-22579494)
chr6 (400-535)||(26224422-26224557)
chr6 (406-535)||(495637-495766)
chr6 (400-530)||(11049766-11049896)
chr6 (420-537)||(14872133-14872250)
chr6 (401-537)||(11530220-11530356)
chr6 (400-529)||(26939581-26939710)
chr6 (400-537)||(6978273-6978408)
chr6 (401-527)||(12844998-12845124)
chr6 (400-530)||(33250723-33250853)
chr6 (400-535)||(1939252-1939387)
chr6 (400-535)||(21140933-21141068)
chr6 (401-527)||(12351604-12351730)
chr6 (400-530)||(22055627-22055757)
chr6 (401-530)||(18048783-18048912)
chr6 (400-529)||(20182139-20182268)
chr6 (400-529)||(22153723-22153852)
chr6 (400-503)||(27705416-27705519)
chr6 (400-535)||(2669303-2669438)
chr6 (400-535)||(27796844-27796979)
chr6 (406-535)||(21990185-21990313)
chr6 (420-535)||(6605506-6605621)
chr6 (416-535)||(15448395-15448514)
chr6 (401-521)||(23281781-23281901)
chr6 (435-535)||(14772690-14772790)
chr6 (400-535)||(9885237-9885372)
chr6 (400-535)||(18492363-18492498)
chr6 (425-535)||(5360428-5360538)
chr6 (401-535)||(16250812-16250946)
chr6 (420-530)||(12499230-12499340)
chr6 (420-530)||(12506559-12506669)
chr6 (420-530)||(12509561-12509671)
chr6 (406-535)||(30833970-30834099)
chr6 (420-529)||(28668114-28668223)
chr6 (420-535)||(5192199-5192314)
chr6 (400-494)||(14036614-14036708)
chr6 (400-502)||(21691539-21691641)
chr6 (400-529)||(12160863-12160991)
chr6 (420-503)||(13145016-13145099)
chr6 (420-503)||(33547560-33547643)
chr6 (401-514)||(343594-343707)
chr6 (400-535)||(9060085-9060219)
chr6 (420-537)||(11350196-11350310)
chr6 (400-508)||(17919530-17919638)
chr6 (436-529)||(15509186-15509279)
chr6 (420-535)||(15961417-15961532)
chr6 (400-494)||(19175828-19175921)
chr6 (420-537)||(1954895-1955011)
chr6 (420-537)||(6065451-6065568)
chr6 (400-537)||(16118140-16118277)
chr6 (407-535)||(12157386-12157514)
chr6 (449-529)||(10458807-10458887)
chr6 (425-529)||(12205201-12205305)
chr6 (424-530)||(10929511-10929618)
chr6 (420-530)||(20692826-20692936)
chr6 (401-503)||(5270387-5270490)
chr6 (401-470)||(11431715-11431784)
chr6 (462-529)||(5250195-5250262)
chr6 (409-537)||(30745727-30745853)
chr6 (447-494)||(3673184-3673231)
chr6 (420-488)||(16764825-16764893)
[»] chr7 (64 HSPs)
chr7 (401-537)||(39979632-39979768)
chr7 (400-528)||(36636500-36636628)
chr7 (400-537)||(40847443-40847580)
chr7 (400-535)||(23232033-23232168)
chr7 (400-535)||(28800872-28801007)
chr7 (400-529)||(15014421-15014550)
chr7 (400-535)||(22486388-22486523)
chr7 (400-529)||(47523666-47523795)
chr7 (400-535)||(27806012-27806147)
chr7 (420-537)||(1824208-1824325)
chr7 (400-537)||(20174014-20174151)
chr7 (406-535)||(21917344-21917473)
chr7 (420-537)||(26577279-26577396)
chr7 (400-537)||(36993814-36993951)
chr7 (400-528)||(7733329-7733457)
chr7 (401-514)||(23577220-23577333)
chr7 (400-535)||(31425521-31425656)
chr7 (400-537)||(2457664-2457799)
chr7 (400-537)||(1907349-1907486)
chr7 (420-537)||(4514779-4514896)
chr7 (406-535)||(18217829-18217958)
chr7 (410-535)||(1842898-1843023)
chr7 (406-535)||(11036507-11036636)
chr7 (400-537)||(24140444-24140581)
chr7 (400-530)||(37135300-37135430)
chr7 (400-514)||(10050867-10050981)
chr7 (400-529)||(24605832-24605961)
chr7 (406-530)||(23750751-23750875)
chr7 (400-535)||(48933130-48933265)
chr7 (406-514)||(45664768-45664876)
chr7 (400-535)||(20429459-20429594)
chr7 (400-530)||(816206-816336)
chr7 (406-535)||(6849221-6849350)
chr7 (406-535)||(9698548-9698677)
chr7 (400-529)||(42926435-42926565)
chr7 (400-503)||(31042245-31042348)
chr7 (400-503)||(38057626-38057729)
chr7 (420-535)||(3872197-3872312)
chr7 (420-535)||(3904488-3904603)
chr7 (419-535)||(11852021-11852137)
chr7 (400-529)||(20923974-20924103)
chr7 (400-529)||(23699841-23699970)
chr7 (416-520)||(21623031-21623135)
chr7 (400-535)||(22501588-22501723)
chr7 (406-530)||(27304872-27304994)
chr7 (409-535)||(32267350-32267475)
chr7 (412-530)||(14786650-14786768)
chr7 (422-535)||(23539248-23539361)
chr7 (420-530)||(33427704-33427813)
chr7 (400-514)||(11890178-11890292)
chr7 (424-529)||(2650844-2650949)
chr7 (418-494)||(15969796-15969872)
chr7 (400-530)||(21871566-21871692)
chr7 (420-536)||(1822005-1822118)
chr7 (400-529)||(25777128-25777257)
chr7 (400-529)||(26415418-26415547)
chr7 (401-503)||(27130329-27130429)
chr7 (401-494)||(15330256-15330349)
chr7 (400-483)||(687871-687954)
chr7 (438-536)||(1841792-1841889)
chr7 (401-527)||(10222648-10222773)
chr7 (420-529)||(2093378-2093487)
chr7 (400-529)||(27132737-27132866)
chr7 (479-531)||(38090336-38090388)
[»] chr2 (55 HSPs)
chr2 (400-535)||(41637608-41637743)
chr2 (400-537)||(30783328-30783465)
chr2 (400-537)||(31266344-31266481)
chr2 (400-535)||(29749413-29749548)
chr2 (400-537)||(27327606-27327743)
chr2 (400-537)||(28841350-28841487)
chr2 (400-535)||(32300441-32300576)
chr2 (411-535)||(28319589-28319713)
chr2 (400-535)||(1141526-1141661)
chr2 (400-535)||(15636745-15636880)
chr2 (400-535)||(18551263-18551398)
chr2 (401-530)||(23388393-23388522)
chr2 (400-535)||(13788065-13788200)
chr2 (400-535)||(20065084-20065219)
chr2 (400-535)||(22140374-22140509)
chr2 (400-535)||(41736162-41736297)
chr2 (406-535)||(32008948-32009078)
chr2 (400-530)||(21293726-21293856)
chr2 (400-530)||(32185822-32185952)
chr2 (400-530)||(44366012-44366142)
chr2 (400-535)||(14757131-14757266)
chr2 (400-531)||(26687704-26687836)
chr2 (401-529)||(37724008-37724136)
chr2 (420-535)||(43408521-43408636)
chr2 (400-530)||(8430286-8430416)
chr2 (400-536)||(18916410-18916545)
chr2 (400-483)||(27523001-27523084)
chr2 (416-535)||(12779606-12779725)
chr2 (401-529)||(28262355-28262483)
chr2 (416-535)||(37552233-37552352)
chr2 (408-535)||(44722930-44723057)
chr2 (412-529)||(13613109-13613226)
chr2 (416-535)||(23857968-23858086)
chr2 (420-535)||(44476385-44476500)
chr2 (420-535)||(7093578-7093693)
chr2 (400-519)||(40018792-40018911)
chr2 (453-535)||(27039918-27040000)
chr2 (430-528)||(35697475-35697573)
chr2 (406-537)||(18609510-18609641)
chr2 (420-535)||(26243331-26243446)
chr2 (418-530)||(36550844-36550955)
chr2 (406-537)||(37802387-37802517)
chr2 (420-535)||(38362281-38362396)
chr2 (400-529)||(2556085-2556214)
chr2 (416-531)||(8763640-8763755)
chr2 (400-530)||(36373890-36374018)
chr2 (401-519)||(13134646-13134764)
chr2 (400-494)||(9004359-9004453)
chr2 (400-451)||(22192182-22192233)
chr2 (401-471)||(29998633-29998703)
chr2 (422-514)||(31966556-31966647)
chr2 (400-451)||(27058410-27058461)
chr2 (401-528)||(9590461-9590588)
chr2 (463-530)||(16098932-16098999)
chr2 (406-497)||(13436685-13436776)
[»] scaffold0047 (1 HSPs)
scaffold0047 (401-537)||(58577-58713)
[»] chr1 (74 HSPs)
chr1 (400-535)||(50845340-50845475)
chr1 (400-537)||(13102310-13102447)
chr1 (401-535)||(12720804-12720938)
chr1 (400-535)||(14760861-14760996)
chr1 (401-537)||(7830026-7830162)
chr1 (400-528)||(6459211-6459339)
chr1 (400-535)||(9109985-9110120)
chr1 (400-535)||(45839286-45839421)
chr1 (400-535)||(41752427-41752562)
chr1 (400-529)||(22158796-22158925)
chr1 (400-535)||(6412063-6412198)
chr1 (406-537)||(16913585-16913716)
chr1 (400-529)||(9464097-9464226)
chr1 (400-514)||(15243079-15243193)
chr1 (400-529)||(22789607-22789736)
chr1 (400-535)||(20408170-20408305)
chr1 (401-529)||(38531186-38531314)
chr1 (400-535)||(52183672-52183807)
chr1 (400-537)||(18894908-18895045)
chr1 (408-514)||(12174797-12174903)
chr1 (416-535)||(4340417-4340536)
chr1 (400-520)||(41071860-41071980)
chr1 (410-535)||(46339455-46339580)
chr1 (400-529)||(12161808-12161937)
chr1 (400-529)||(19081722-19081851)
chr1 (400-529)||(19129610-19129739)
chr1 (420-529)||(19865258-19865367)
chr1 (400-529)||(23457891-23458020)
chr1 (400-535)||(17661044-17661179)
chr1 (400-535)||(22603542-22603677)
chr1 (420-535)||(28229465-28229580)
chr1 (416-535)||(41120747-41120866)
chr1 (420-535)||(46790014-46790129)
chr1 (401-535)||(48522513-48522647)
chr1 (406-535)||(29549418-29549547)
chr1 (400-535)||(12989846-12989981)
chr1 (416-535)||(46785968-46786087)
chr1 (401-535)||(18890559-18890693)
chr1 (406-535)||(7181565-7181694)
chr1 (400-530)||(9985342-9985472)
chr1 (400-530)||(17200025-17200155)
chr1 (400-537)||(30928386-30928523)
chr1 (415-529)||(50092314-50092428)
chr1 (400-503)||(13523003-13523106)
chr1 (400-529)||(46865237-46865366)
chr1 (406-530)||(9259198-9259322)
chr1 (400-537)||(17733961-17734099)
chr1 (406-514)||(32046876-32046984)
chr1 (420-530)||(13308835-13308945)
chr1 (400-514)||(41063191-41063305)
chr1 (437-535)||(25788007-25788105)
chr1 (416-530)||(9177110-9177224)
chr1 (400-483)||(12370003-12370086)
chr1 (420-535)||(8941004-8941119)
chr1 (400-535)||(13195577-13195712)
chr1 (420-509)||(41359001-41359091)
chr1 (400-537)||(11917780-11917916)
chr1 (410-535)||(51973428-51973553)
chr1 (400-529)||(20290337-20290465)
chr1 (420-537)||(12806844-12806963)
chr1 (447-529)||(27253871-27253953)
chr1 (401-529)||(20580904-20581033)
chr1 (400-497)||(16258534-16258631)
chr1 (400-535)||(18787923-18788055)
chr1 (412-514)||(26825246-26825348)
chr1 (401-503)||(29093596-29093698)
chr1 (420-514)||(9882071-9882162)
chr1 (416-537)||(39748943-39749064)
chr1 (420-537)||(49881058-49881174)
chr1 (400-535)||(6775881-6776015)
chr1 (421-494)||(45918955-45919028)
chr1 (416-497)||(30673504-30673585)
chr1 (400-468)||(52621148-52621216)
chr1 (415-470)||(25687355-25687410)
[»] chr8 (63 HSPs)
chr8 (401-535)||(17824626-17824760)
chr8 (400-530)||(17103880-17104010)
chr8 (400-535)||(33652559-33652694)
chr8 (400-535)||(24576034-24576169)
chr8 (406-535)||(8555314-8555443)
chr8 (400-535)||(3823125-3823260)
chr8 (400-535)||(4330970-4331105)
chr8 (400-535)||(17810290-17810425)
chr8 (400-535)||(18010070-18010205)
chr8 (400-535)||(19240859-19240994)
chr8 (400-535)||(19314043-19314178)
chr8 (400-535)||(27910774-27910909)
chr8 (400-535)||(27957193-27957328)
chr8 (400-537)||(37992091-37992228)
chr8 (400-535)||(29350915-29351051)
chr8 (400-535)||(22939305-22939440)
chr8 (400-535)||(24193206-24193341)
chr8 (400-535)||(27869230-27869365)
chr8 (406-529)||(43431575-43431698)
chr8 (400-537)||(6816391-6816528)
chr8 (401-537)||(18844552-18844688)
chr8 (416-535)||(11938753-11938871)
chr8 (416-535)||(19256220-19256339)
chr8 (420-535)||(19488071-19488186)
chr8 (400-535)||(21350470-21350605)
chr8 (400-535)||(32961651-32961786)
chr8 (441-537)||(8789873-8789969)
chr8 (420-535)||(10917839-10917954)
chr8 (420-535)||(13060941-13061056)
chr8 (400-530)||(4647770-4647900)
chr8 (400-529)||(40289437-40289565)
chr8 (416-520)||(5670194-5670298)
chr8 (400-535)||(9915051-9915185)
chr8 (420-524)||(26399028-26399132)
chr8 (416-535)||(30687944-30688063)
chr8 (420-535)||(32247921-32248036)
chr8 (416-531)||(24636660-24636775)
chr8 (400-503)||(5879196-5879299)
chr8 (423-535)||(25655868-25655980)
chr8 (400-535)||(6817046-6817181)
chr8 (401-529)||(16061955-16062083)
chr8 (409-529)||(29345072-29345192)
chr8 (416-535)||(30466964-30467083)
chr8 (416-529)||(25000447-25000560)
chr8 (420-535)||(23752296-23752411)
chr8 (420-530)||(31399523-31399633)
chr8 (420-535)||(8824837-8824952)
chr8 (420-509)||(19493691-19493781)
chr8 (420-535)||(25273338-25273452)
chr8 (400-535)||(15251595-15251728)
chr8 (400-535)||(9631395-9631531)
chr8 (406-529)||(31344188-31344311)
chr8 (420-529)||(33412992-33413095)
chr8 (465-535)||(25274654-25274724)
chr8 (400-514)||(21219271-21219383)
chr8 (420-514)||(41527731-41527825)
chr8 (400-502)||(3692214-3692316)
chr8 (438-535)||(6084256-6084351)
chr8 (459-529)||(42700673-42700743)
chr8 (424-497)||(15289660-15289731)
chr8 (424-497)||(15470029-15470100)
chr8 (416-535)||(17003270-17003389)
chr8 (456-537)||(2265387-2265467)
[»] scaffold0058 (1 HSPs)
scaffold0058 (400-537)||(74549-74686)
[»] chr4 (61 HSPs)
chr4 (400-537)||(5399601-5399738)
chr4 (400-536)||(25147713-25147849)
chr4 (400-537)||(33914051-33914188)
chr4 (400-529)||(2275694-2275823)
chr4 (423-537)||(9058960-9059074)
chr4 (400-530)||(22128327-22128457)
chr4 (406-535)||(32175747-32175876)
chr4 (400-535)||(55309222-55309358)
chr4 (400-535)||(22168260-22168395)
chr4 (400-535)||(37378633-37378768)
chr4 (400-535)||(46286239-46286374)
chr4 (400-530)||(1638439-1638569)
chr4 (406-535)||(27040035-27040164)
chr4 (400-535)||(19839171-19839306)
chr4 (400-535)||(8878875-8879010)
chr4 (400-535)||(18051831-18051966)
chr4 (400-494)||(22156652-22156746)
chr4 (406-535)||(5473847-5473976)
chr4 (406-535)||(45532589-45532718)
chr4 (400-529)||(38223502-38223631)
chr4 (416-535)||(4586768-4586887)
chr4 (406-535)||(13564925-13565054)
chr4 (420-529)||(9670495-9670604)
chr4 (400-529)||(19680440-19680569)
chr4 (420-535)||(29625337-29625452)
chr4 (420-535)||(38645762-38645877)
chr4 (401-535)||(44783475-44783610)
chr4 (401-535)||(12071955-12072089)
chr4 (400-529)||(24682343-24682470)
chr4 (400-529)||(9913250-9913379)
chr4 (416-529)||(25026565-25026678)
chr4 (416-535)||(13028826-13028945)
chr4 (416-535)||(18714910-18715029)
chr4 (400-535)||(30268998-30269133)
chr4 (400-535)||(30283056-30283191)
chr4 (420-535)||(30507999-30508114)
chr4 (423-535)||(9238635-9238747)
chr4 (420-529)||(9239297-9239406)
chr4 (400-514)||(18744101-18744215)
chr4 (401-530)||(36689670-36689799)
chr4 (420-535)||(7111956-7112071)
chr4 (400-535)||(16915361-16915496)
chr4 (420-535)||(38619859-38619974)
chr4 (400-530)||(30568014-30568144)
chr4 (420-514)||(14944758-14944852)
chr4 (416-535)||(54539294-54539413)
chr4 (420-537)||(4606837-4606954)
chr4 (400-530)||(29238415-29238545)
chr4 (420-529)||(12105995-12106103)
chr4 (401-535)||(3612988-3613123)
chr4 (416-535)||(4627088-4627207)
chr4 (400-535)||(30420043-30420178)
chr4 (410-480)||(37761907-37761977)
chr4 (420-514)||(6553816-6553910)
chr4 (400-530)||(39234934-39235063)
chr4 (448-535)||(42055437-42055524)
chr4 (424-514)||(313603-313693)
chr4 (416-529)||(34557191-34557304)
chr4 (416-472)||(45091282-45091338)
chr4 (431-502)||(23104371-23104442)
chr4 (401-529)||(25225092-25225218)
[»] scaffold0069 (1 HSPs)
scaffold0069 (401-537)||(10153-10289)
[»] scaffold0219 (1 HSPs)
scaffold0219 (400-535)||(19597-19732)
[»] scaffold0576 (1 HSPs)
scaffold0576 (400-535)||(9239-9374)
[»] scaffold0001 (3 HSPs)
scaffold0001 (400-535)||(8120-8255)
scaffold0001 (400-535)||(21852-21987)
scaffold0001 (400-535)||(84297-84432)
[»] scaffold0603 (1 HSPs)
scaffold0603 (400-530)||(5994-6124)
[»] scaffold0717 (1 HSPs)
scaffold0717 (400-535)||(928-1064)
[»] scaffold0599 (1 HSPs)
scaffold0599 (400-535)||(7499-7634)
[»] scaffold0502 (1 HSPs)
scaffold0502 (400-537)||(10886-11023)
[»] scaffold0007 (3 HSPs)
scaffold0007 (410-535)||(3746-3871)
scaffold0007 (401-529)||(202769-202897)
scaffold0007 (400-472)||(276207-276279)
[»] scaffold0087 (1 HSPs)
scaffold0087 (400-518)||(37814-37932)
[»] scaffold0076 (1 HSPs)
scaffold0076 (406-535)||(26483-26612)
[»] scaffold0006 (2 HSPs)
scaffold0006 (420-535)||(84684-84799)
scaffold0006 (408-529)||(121003-121124)
[»] scaffold0240 (1 HSPs)
scaffold0240 (416-535)||(15000-15119)
[»] scaffold0128 (1 HSPs)
scaffold0128 (416-535)||(10673-10792)
[»] scaffold0108 (1 HSPs)
scaffold0108 (400-535)||(12647-12781)
[»] scaffold0014 (1 HSPs)
scaffold0014 (416-535)||(22221-22340)
[»] scaffold0009 (3 HSPs)
scaffold0009 (400-535)||(219630-219765)
scaffold0009 (420-529)||(182544-182653)
scaffold0009 (420-535)||(215673-215781)
[»] scaffold0655 (1 HSPs)
scaffold0655 (400-529)||(3178-3305)
[»] scaffold0161 (1 HSPs)
scaffold0161 (400-535)||(6789-6924)
[»] scaffold0023 (1 HSPs)
scaffold0023 (400-535)||(39713-39848)
[»] scaffold0035 (1 HSPs)
scaffold0035 (400-535)||(74727-74863)
[»] scaffold0184 (1 HSPs)
scaffold0184 (401-514)||(7451-7564)
[»] scaffold0062 (1 HSPs)
scaffold0062 (406-529)||(43917-44040)
[»] scaffold0019 (1 HSPs)
scaffold0019 (401-535)||(173439-173574)
[»] scaffold0002 (1 HSPs)
scaffold0002 (420-513)||(439977-440070)
[»] scaffold0284 (1 HSPs)
scaffold0284 (420-514)||(1550-1644)
[»] scaffold0011 (1 HSPs)
scaffold0011 (457-530)||(17632-17705)
[»] scaffold0114 (1 HSPs)
scaffold0114 (420-514)||(36316-36410)
[»] scaffold0211 (1 HSPs)
scaffold0211 (420-508)||(19175-19263)


Alignment Details
Target: chr5 (Bit Score: 330; Significance: 0; HSPs: 59)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 330; E-Value: 0
Query Start/End: Original strand, 1 - 366
Target Start/End: Complemental strand, 33806926 - 33806561
Alignment:
Q  1 tattttgcgcatctggagattttaggatagaatgaacatgggacaaccaactacattaaaattccaggttgaggttacaatgtttctatagtctgtatgc 100  Q
    ||||||| |||||||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||     
T  33806926 tattttgagcatctggagcttttaggatagaatgaacatgggacaaccaactacattaaaattctaggttgaggttacaatgtttctatagtctgtatgt 33806827  T
Q  101 agggtccacatttattgaaatttaaactaggtaacaaacttgttttgagtggcttcaaaatcaagcaaaaatgggtgatagtctgagttagttcttaata 200  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |||||||| |||| |||||||||||||||    
T  33806826 agggtccacatttattgaaatttaaactaggtaacaaacttgttttgagtggcttcaaaatcaaggaaaattgggtgatggtctaagttagttcttaata 33806727  T
Q  201 gggttgaacaggttacacaggtacacatttcaagccaaaggtgtttgcaaatgaatctgtccagtcttctttcagtgtatcttcttccacttctaccatt 300  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  33806726 gggttgaacaggttacacaggtacacatttcaagccaaaggtgtttgcaaatgaatctgtccagtcttctttcagtgtatcttcttccacttctaccatt 33806627  T
Q  301 ttgccaagcgaatgttgcacctttggtggtaaggtgtatcaggttatttctattagtccacaattg 366  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  33806626 ttgccaagcgaatgttgcacctttggtgggaaggtgtatcaggttatttctattagtccacaattg 33806561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 119; E-Value: 1e-60
Query Start/End: Original strand, 361 - 514
Target Start/End: Complemental strand, 33816942 - 33816789
Alignment:
Q  361 caattggtctaaactgactcattatcactactnnnnnnncaaaagttagtgagggaaatttagtgagggaaaacatgaaatccctttctaantccgtcac 460  Q
    ||||||||||||||||||||||| ||||||||       |||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||    
T  33816942 caattggtctaaactgactcattgtcactactaaaaaaacaaaagttagtgagggaaatttagtgagggaaaacatgaaattcctttctaattccgtcac 33816843  T
Q  461 taaattttgcgaccaaggaatttgtgaggaattttatgttttctgtcacnaatt 514  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  33816842 taaattttgcgaccaaggaatttgtgaggaattttatgttttctgtcacaaatt 33816789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 108; E-Value: 5e-54
Query Start/End: Original strand, 400 - 535
Target Start/End: Complemental strand, 33818706 - 33818571
Alignment:
Q  400 caaaagttagtgagggaaatttagtgagggaaaacatgaaatccctttctaantccgtcactaaattttgcgaccaaggaatttgtgaggaattttatgt 499  Q
    ||||| |||||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  33818706 caaaaattagtgagggaaatttagtgagggaaaacatgaaatccctctctaattccgtcactaaattttgcgaccaaggaatttgtgaggaattttatgt 33818607  T
Q  500 tttctgtcacnaattnccctccctaattttgcnttt 535  Q
    |||| ||||| |||| ||||||| |||||||| |||    
T  33818606 tttccgtcacaaatttccctccccaattttgctttt 33818571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 98; E-Value: 5e-48
Query Start/End: Original strand, 401 - 531
Target Start/End: Complemental strand, 23423900 - 23423770
Alignment:
Q  401 aaaagttagtgagggaaatttagtgagggaaaacatgaaatccctttctaantccgtcactaaattttgcgaccaaggaatttgtgaggaattttatgtt 500  Q
    |||| |||||||| ||||||||||||||||||||||||||||||| ||||| |||||||||||||||||| |||||||||||||||||||||||||||||    
T  23423900 aaaaattagtgagtgaaatttagtgagggaaaacatgaaatccctctctaattccgtcactaaattttgcaaccaaggaatttgtgaggaattttatgtt 23423801  T
Q  501 ttctgtcacnaattnccctccctaattttgc 531  Q
    ||  ||||| |||| ||||||||||||||||    
T  23423800 tttcgtcacaaatttccctccctaattttgc 23423770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 96; E-Value: 8e-47
Query Start/End: Original strand, 400 - 535
Target Start/End: Original strand, 618288 - 618423
Alignment:
Q  400 caaaagttagtgagggaaatttagtgagggaaaacatgaaatccctttctaantccgtcactaaattttgcgaccaaggaatttgtgaggaattttatgt 499  Q
    ||||| ||||||||||| |||||||||||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||| || |    
T  618288 caaaaattagtgagggatatttagtgagggaaaacatgaaatccctctctaattccgtcactaaattttgcgaccaaggaatttgtgaggaatttcattt 618387  T
Q  500 tttctgtcacnaattnccctccctaattttgcnttt 535  Q
    |||| ||||| |||| ||||| |||||||||| |||    
T  618388 tttccgtcactaatttccctcgctaattttgctttt 618423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 96; E-Value: 8e-47
Query Start/End: Original strand, 400 - 535
Target Start/End: Complemental strand, 16121984 - 16121849
Alignment:
Q  400 caaaagttagtgagggaaatttagtgagggaaaacatgaaatccctttctaantccgtcactaaattttgcgaccaaggaatttgtgaggaattttatgt 499  Q
    ||||| ||||||||||| |||||||||||||||||||||||||||| ||||| ||||||||||||||||| ||||||||||||||||||||||||||| |    
T  16121984 caaaaattagtgagggatatttagtgagggaaaacatgaaatccctctctaattccgtcactaaattttgtgaccaaggaatttgtgaggaattttattt 16121885  T
Q  500 tttctgtcacnaattnccctccctaattttgcnttt 535  Q
    |||| ||||| |||| ||||| |||||||||| |||    
T  16121884 tttccgtcactaatttccctcgctaattttgctttt 16121849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 420 - 537
Target Start/End: Complemental strand, 25397913 - 25397796
Alignment:
Q  420 ttagtgagggaaaacatgaaatccctttctaantccgtcactaaattttgcgaccaaggaatttgtgaggaattttatgttttctgtcacnaattnccct 519  Q
    |||||||||||||||||||||||||| ||||| |||||||||||||||||||||||| |||||||||| ||||||||||||||| ||||| |||| ||||    
T  25397913 ttagtgagggaaaacatgaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgacgaattttatgttttccgtcacaaatttccct 25397814  T
Q  520 ccctaattttgcntttcc 537  Q
    |||||||||||| |||||    
T  25397813 ccctaattttgcttttcc 25397796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 86; E-Value: 7e-41
Query Start/End: Original strand, 406 - 535
Target Start/End: Complemental strand, 17039770 - 17039641
Alignment:
Q  406 ttagtgagggaaatttagtgagggaaaacatgaaatccctttctaantccgtcactaaattttgcgaccaaggaatttgtgaggaattttatgttttctg 505  Q
    |||||||||||||| |||||||||||||| |||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||| || ||||| |    
T  17039770 ttagtgagggaaatatagtgagggaaaacgtgaaatccctctctaattccgtcactaaattttgcgaccaaggaatttgtgaggaatttcattttttccg 17039671  T
Q  506 tcacnaattnccctccctaattttgcnttt 535  Q
    |||| ||||  |||| |||||||||| |||    
T  17039670 tcactaattttcctcactaattttgctttt 17039641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 400 - 535
Target Start/End: Complemental strand, 2472859 - 2472724
Alignment:
Q  400 caaaagttagtgagggaaatttagtgagggaaaacatgaaatccctttctaantccgtcactaaattttgcgaccaaggaatttgtgaggaattttatgt 499  Q
    ||||| ||| ||||||| |||||||||||||||||||||||||||| ||||| ||||||| |||||||||||||||||||||||||||||||||| || |    
T  2472859 caaaaattaatgagggatatttagtgagggaaaacatgaaatccctctctaattccgtcattaaattttgcgaccaaggaatttgtgaggaatttcattt 2472760  T
Q  500 tttctgtcacnaattnccctccctaattttgcnttt 535  Q
    |||| ||||| |||| || || |||||||||| |||    
T  2472759 tttccgtcactaatttccttcactaattttgctttt 2472724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 400 - 535
Target Start/End: Complemental strand, 35620488 - 35620354
Alignment:
Q  400 caaaagttagtgagggaaatttagtgagggaaaacatgaaatccctttctaantccgtcactaaattttgcgaccaaggaatttgtgaggaattttatgt 499  Q
    ||||| ||| ||||||| |||||||||||||||||||||||||| | ||||| ||||||||||||||||||||||||||||||||||||||| ||||| |    
T  35620488 caaaaattaatgagggatatttagtgagggaaaacatgaaatccttctctaattccgtcactaaattttgcgaccaaggaatttgtgaggaa-tttattt 35620390  T
Q  500 tttctgtcacnaattnccctccctaattttgcnttt 535  Q
    |||| ||||| |||| ||||| |||||||||| |||    
T  35620389 tttccgtcactaatttccctcgctaattttgctttt 35620354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 401 - 535
Target Start/End: Original strand, 23975630 - 23975764
Alignment:
Q  401 aaaagttagtgagggaaatttagtgagggaaaacatgaaatccctttctaantccgtcactaaattttgcgaccaaggaatttgtgaggaattttatgtt 500  Q
    |||| |||||||||||||||| |||||||||||| |||||||||| ||||| ||||||||||||||||||||||| | |||||||||||||||| || ||    
T  23975630 aaaaattagtgagggaaattttgtgagggaaaacgtgaaatccctctctaattccgtcactaaattttgcgaccatgaaatttgtgaggaatttcatttt 23975729  T
Q  501 ttctgtcacnaattnccctccctaattttgcnttt 535  Q
    ||| ||||| |||| ||||| |||||||||| |||    
T  23975730 ttccgtcactaatttccctcgctaattttgctttt 23975764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 420 - 535
Target Start/End: Complemental strand, 746993 - 746878
Alignment:
Q  420 ttagtgagggaaaacatgaaatccctttctaantccgtcactaaattttgcgaccaaggaatttgtgaggaattttatgttttctgtcacnaattnccct 519  Q
    ||||||||||||||| |||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||| || ||||| ||||| |||| ||||    
T  746993 ttagtgagggaaaacgtgaaatccctctctaattccgtcactaaattttgcgaccaaggaatttgtgaggaatttcattttttccgtcactaatttccct 746894  T
Q  520 ccctaattttgcnttt 535  Q
    | |||||||||| |||    
T  746893 cgctaattttgctttt 746878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 400 - 535
Target Start/End: Original strand, 7888791 - 7888926
Alignment:
Q  400 caaaagttagtgagggaaatttagtgagggaaaacatgaaatccctttctaantccgtcactaaattttgcgaccaaggaatttgtgaggaattttatgt 499  Q
    ||||| ||||||||| ||||||||||||||||||| | |||||||| ||||| |||||||||||||||| ||||||||||||||||||||||||| || |    
T  7888791 caaaaattagtgaggaaaatttagtgagggaaaacgtaaaatccctctctaactccgtcactaaattttacgaccaaggaatttgtgaggaatttcattt 7888890  T
Q  500 tttctgtcacnaattnccctccctaattttgcnttt 535  Q
    |||| ||||  |||| ||||| |||||||||| |||    
T  7888891 tttccgtcaataatttccctcgctaattttgctttt 7888926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 400 - 535
Target Start/End: Complemental strand, 8109005 - 8108870
Alignment:
Q  400 caaaagttagtgagggaaatttagtgagggaaaacatgaaatccctttctaantccgtcactaaattttgcgaccaaggaatttgtgaggaattttatgt 499  Q
    ||||| |||||||| ||||||| ||||||||||||||||||| ||| ||||| ||||||||||||||||||||||| | |||||||||||||||| || |    
T  8109005 caaaaattagtgagagaaattttgtgagggaaaacatgaaattcctctctaattccgtcactaaattttgcgaccatgaaatttgtgaggaatttcattt 8108906  T
Q  500 tttctgtcacnaattnccctccctaattttgcnttt 535  Q
    |||| ||||| |||| ||||| |||||||||| |||    
T  8108905 tttccgtcactaatttccctctctaattttgctttt 8108870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 400 - 535
Target Start/End: Complemental strand, 8886996 - 8886861
Alignment:
Q  400 caaaagttagtgagggaaatttagtgagggaaaacatgaaatccctttctaantccgtcactaaattttgcgaccaaggaatttgtgaggaattttatgt 499  Q
    ||||| ||||||||||||||||||||||||||||  | |||||||| ||||| |||||||||||||||||||||||||||||||||||||||||| || |    
T  8886996 caaaaattagtgagggaaatttagtgagggaaaatgtaaaatccctctctaattccgtcactaaattttgcgaccaaggaatttgtgaggaatttcattt 8886897  T
Q  500 tttctgtcacnaattnccctccctaattttgcnttt 535  Q
    |||  ||||| ||||  |||| |||||||||| |||    
T  8886896 ttttcgtcacaaattttcctcgctaattttgctttt 8886861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 400 - 535
Target Start/End: Original strand, 12045721 - 12045856
Alignment:
Q  400 caaaagttagtgagggaaatttagtgagggaaaacatgaaatccctttctaantccgtcactaaattttgcgaccaaggaatttgtgaggaattttatgt 499  Q
    ||||| ||||||||||||||||||||||||||||| | |||||| | ||||| |||||||||||||||| |||||||| |||||||||||||||| || |    
T  12045721 caaaaattagtgagggaaatttagtgagggaaaacgtaaaatccttctctaattccgtcactaaattttacgaccaagaaatttgtgaggaatttcattt 12045820  T
Q  500 tttctgtcacnaattnccctccctaattttgcnttt 535  Q
    |||| ||||| |||| ||||| |||||||||| |||    
T  12045821 tttccgtcactaatttccctcgctaattttgctttt 12045856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 400 - 535
Target Start/End: Complemental strand, 12328371 - 12328236
Alignment:
Q  400 caaaagttagtgagggaaatttagtgagggaaaacatgaaatccctttctaantccgtcactaaattttgcgaccaaggaatttgtgaggaattttatgt 499  Q
    ||||| ||||||||||| |||||||||||||||||||||||| ||| ||||| |||||||||||||||||||| |||| |||||||||||||||| || |    
T  12328371 caaaaattagtgagggatatttagtgagggaaaacatgaaattcctctctaattccgtcactaaattttgcgatcaagaaatttgtgaggaatttcattt 12328272  T
Q  500 tttctgtcacnaattnccctccctaattttgcnttt 535  Q
    |||| || || |||| ||||| |||||||||| |||    
T  12328271 tttccgttactaatttccctcactaattttgctttt 12328236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 400 - 535
Target Start/End: Original strand, 15060967 - 15061102
Alignment:
Q  400 caaaagttagtgagggaaatttagtgagggaaaacatgaaatccctttctaantccgtcactaaattttgcgaccaaggaatttgtgaggaattttatgt 499  Q
    ||||| |||||||||||||||| |||||| ||||| |||||||||| ||||| ||||||||||||||||||||||| | |||||||||||||||| || |    
T  15060967 caaaaattagtgagggaaattttgtgaggaaaaacgtgaaatccctctctaattccgtcactaaattttgcgaccatgaaatttgtgaggaatttcattt 15061066  T
Q  500 tttctgtcacnaattnccctccctaattttgcnttt 535  Q
    |||| ||||| |||| ||||| |||||||||| |||    
T  15061067 tttcggtcactaatttccctcgctaattttgctttt 15061102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 400 - 535
Target Start/End: Original strand, 36196388 - 36196523
Alignment:
Q  400 caaaagttagtgagggaaatttagtgagggaaaacatgaaatccctttctaantccgtcactaaattttgcgaccaaggaatttgtgaggaattttatgt 499  Q
    ||||| |||||||||||||||| |||||||||||  |||||||||| ||||| ||||||||||||||||||||||| ||| |||||||||||||| || |    
T  36196388 caaaaattagtgagggaaattttgtgagggaaaatgtgaaatccctctctaattccgtcactaaattttgcgaccatggattttgtgaggaatttcattt 36196487  T
Q  500 tttctgtcacnaattnccctccctaattttgcnttt 535  Q
    |||| ||||| |||| ||||| |||||||||| |||    
T  36196488 tttccgtcactaatttccctcgctaattttgctttt 36196523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 76; E-Value: 7e-35
Query Start/End: Original strand, 400 - 535
Target Start/End: Complemental strand, 25652728 - 25652593
Alignment:
Q  400 caaaagttagtgagggaaatttagtgagggaaaacatgaaatccctttctaantccgtcactaaattttgcgaccaaggaatttgtgaggaattttatgt 499  Q
    ||||| || |||||||||||||||||||||||||  | |||||||| ||||| |||||||| |||||||||||| |||||||||||||||||||| || |    
T  25652728 caaaatttggtgagggaaatttagtgagggaaaatgtaaaatccctctctaattccgtcacaaaattttgcgactaaggaatttgtgaggaatttcattt 25652629  T
Q  500 tttctgtcacnaattnccctccctaattttgcnttt 535  Q
    ||||||||||  ||| ||||| |||||||||| |||    
T  25652628 tttctgtcactgatttccctcgctaattttgctttt 25652593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 400 - 529
Target Start/End: Original strand, 17986723 - 17986852
Alignment:
Q  400 caaaagttagtgagggaaatttagtgagggaaaacatgaaatccctttctaantccgtcactaaattttgcgaccaaggaatttgtgaggaattttatgt 499  Q
    ||||| ||||||||||| |||||||||||||||||||||||| | | ||||| ||||||||||||||||||||| ||||||||||||| |||||| || |    
T  17986723 caaaaattagtgagggatatttagtgagggaaaacatgaaattcttctctaattccgtcactaaattttgcgacgaaggaatttgtgaagaatttcattt 17986822  T
Q  500 tttctgtcacnaattnccctccctaatttt 529  Q
    |||| ||||| |||| | ||| ||||||||    
T  17986823 tttccgtcactaatttctctcactaatttt 17986852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 400 - 529
Target Start/End: Complemental strand, 25673373 - 25673245
Alignment:
Q  400 caaaagttagtgagggaaatttagtgagggaaaacatgaaatccctttctaantccgtcactaaattttgcgaccaaggaatttgtgaggaattttatgt 499  Q
    ||||| |||||||||||||||||||||  ||||||||||||||||| ||||| ||||||||| |||||||||||||| |||||||| |||| |||||| |    
T  25673373 caaaatttagtgagggaaatttagtgacagaaaacatgaaatccctctctaattccgtcactgaattttgcgaccaaagaatttgt-aggagttttattt 25673275  T
Q  500 tttctgtcacnaattnccctccctaatttt 529  Q
    |||| ||||| ||||  |||||||||||||    
T  25673274 tttccgtcactaattttcctccctaatttt 25673245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 401 - 529
Target Start/End: Complemental strand, 13620271 - 13620143
Alignment:
Q  401 aaaagttagtgagggaaatttagtgagggaaaacatgaaatccctttctaantccgtcactaaattttgcgaccaaggaatttgtgaggaattttatgtt 500  Q
    |||| ||||||| |||||||||||||||||||||||||||||||| ||||| || ||||| |||||||||||||||  ||||||||||  ||||||| ||    
T  13620271 aaaaattagtgacggaaatttagtgagggaaaacatgaaatccctctctaattctgtcacaaaattttgcgaccaacaaatttgtgagagattttatttt 13620172  T
Q  501 ttctgtcacnaattnccctccctaatttt 529  Q
    ||| ||||| |||| |||||||| |||||    
T  13620171 ttccgtcactaatttccctccctgatttt 13620143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 401 - 529
Target Start/End: Original strand, 20959503 - 20959631
Alignment:
Q  401 aaaagttagtgagggaaatttagtgagggaaaacatgaaatccctttctaantccgtcactaaattttgcgaccaaggaatttgtgaggaattttatgtt 500  Q
    |||| |||||||||||||||||| |||||||||| ||||||| || ||||| |||||||||||||||| |||| ||||||||||||||||||||||| ||    
T  20959503 aaaaattagtgagggaaatttagagagggaaaacgtgaaatctctctctaattccgtcactaaattttacgactaaggaatttgtgaggaattttatttt 20959602  T
Q  501 ttctgtcacnaattnccctccctaatttt 529  Q
    ||| ||||   |||  |||||||||||||    
T  20959603 ttccgtcagtgattttcctccctaatttt 20959631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 416 - 535
Target Start/End: Complemental strand, 26708714 - 26708595
Alignment:
Q  416 aaatttagtgagggaaaacatgaaatccctttctaantccgtcactaaattttgcgaccaaggaatttgtgaggaattttatgttttctgtcacnaattn 515  Q
    ||||||||||||||||||| | |||| ||| ||||| |||||||||||||||||||||||||||||||||||||||||| || ||||| | ||| ||||     
T  26708714 aaatttagtgagggaaaacgtaaaattcctctctaattccgtcactaaattttgcgaccaaggaatttgtgaggaatttcattttttccggcactaattt 26708615  T
Q  516 ccctccctaattttgcnttt 535  Q
    ||||| |||||||||| |||    
T  26708614 ccctcgctaattttgcattt 26708595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 416 - 535
Target Start/End: Complemental strand, 26978448 - 26978329
Alignment:
Q  416 aaatttagtgagggaaaacatgaaatccctttctaantccgtcactaaattttgcgaccaaggaatttgtgaggaattttatgttttctgtcacnaattn 515  Q
    ||||||||||||||||||| | |||| ||| ||||| |||||||||||||||||||||||||||||||||||||||||| || ||||| | ||| ||||     
T  26978448 aaatttagtgagggaaaacgtaaaattcctctctaattccgtcactaaattttgcgaccaaggaatttgtgaggaatttcattttttccggcactaattt 26978349  T
Q  516 ccctccctaattttgcnttt 535  Q
    ||||| |||||||||| |||    
T  26978348 ccctcgctaattttgcattt 26978329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 401 - 529
Target Start/End: Complemental strand, 27428156 - 27428028
Alignment:
Q  401 aaaagttagtgagggaaatttagtgagggaaaacatgaaatccctttctaantccgtcactaaattttgcgaccaaggaatttgtgaggaattttatgtt 500  Q
    |||| ||||||||| |||||||| |||||||||| |||||||||| ||||| |||||||||||||||||||||||| |||||| | || |||||||| ||    
T  27428156 aaaaattagtgaggaaaatttagagagggaaaacgtgaaatccctctctaattccgtcactaaattttgcgaccaaagaatttattagcaattttatttt 27428057  T
Q  501 ttctgtcacnaattnccctccctaatttt 529  Q
    ||  ||||| |||| ||||||||||||||    
T  27428056 tttcgtcactaatttccctccctaatttt 27428028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 420 - 535
Target Start/End: Complemental strand, 38837796 - 38837681
Alignment:
Q  420 ttagtgagggaaaacatgaaatccctttctaantccgtcactaaattttgcgaccaaggaatttgtgaggaattttatgttttctgtcacnaattnccct 519  Q
    ||||||||||||||| | |||||||| ||||| ||| |||||||||||||||||||||||||||||||||||||| || ||||| ||||| |||| ||||    
T  38837796 ttagtgagggaaaacgtaaaatccctctctaattccatcactaaattttgcgaccaaggaatttgtgaggaatttcattttttccgtcactaatttccct 38837697  T
Q  520 ccctaattttgcnttt 535  Q
    | |||||||||| |||    
T  38837696 cgctaattttgctttt 38837681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 406 - 530
Target Start/End: Complemental strand, 7003867 - 7003745
Alignment:
Q  406 ttagtgagggaaatttagtgagggaaaacatgaaatccctttctaantccgtcactaaattttgcgaccaaggaatttgtgaggaattttatgttttctg 505  Q
    |||||||||||||||| |||||||||||| ||||||| ||  |||| |||||||||||||||||||| || ||||||||||||||||||| | ||||| |    
T  7003867 ttagtgagggaaattttgtgagggaaaacgtgaaatctct--ctaattccgtcactaaattttgcgatcatggaatttgtgaggaattttcttttttccg 7003770  T
Q  506 tcacnaattnccctccctaattttg 530  Q
    |||| |||| ||||| |||||||||    
T  7003769 tcactaatttccctcgctaattttg 7003745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 420 - 520
Target Start/End: Original strand, 10494751 - 10494851
Alignment:
Q  420 ttagtgagggaaaacatgaaatccctttctaantccgtcactaaattttgcgaccaaggaatttgtgaggaattttatgttttctgtcacnaattnccct 519  Q
    ||||||||||||||| | |||||||| ||||| |||||||||||||||||||||||||||||||||||||||||| || ||||| ||||| |||| ||||    
T  10494751 ttagtgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaaggaatttgtgaggaatttcattttttccgtcactaatttccct 10494850  T
Q  520 c 520  Q
    |    
T  10494851 c 10494851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 400 - 535
Target Start/End: Complemental strand, 17036557 - 17036422
Alignment:
Q  400 caaaagttagtgagggaaatttagtgagggaaaacatgaaatccctttctaantccgtcactaaattttgcgaccaaggaatttgtgaggaattttatgt 499  Q
    ||||| || ||||||| ||||||| ||||||||||   |||||||| ||||| || |||||||||||||||||||||||||||||||||||||||||| |    
T  17036557 caaaaatttgtgagggtaatttagagagggaaaacgcaaaatccctctctaattctgtcactaaattttgcgaccaaggaatttgtgaggaattttattt 17036458  T
Q  500 tttctgtcacnaattnccctccctaattttgcnttt 535  Q
     ||| ||||| |||  | |||||||||||||| |||    
T  17036457 cttccgtcactaatctcgctccctaattttgcattt 17036422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 401 - 529
Target Start/End: Complemental strand, 28265619 - 28265491
Alignment:
Q  401 aaaagttagtgagggaaatttagtgagggaaaacatgaaatccctttctaantccgtcactaaattttgcgaccaaggaatttgtgaggaattttatgtt 500  Q
    |||| ||| |||||||||||| ||||||||| || | |||||||| ||||| ||||||||||||||||||||||| |||||||||||||||||| || ||    
T  28265619 aaaaattaatgagggaaattttgtgagggaagacgtaaaatccctctctaattccgtcactaaattttgcgaccatggaatttgtgaggaatttcatttt 28265520  T
Q  501 ttctgtcacnaattnccctccctaatttt 529  Q
    ||| ||||| ||||  |||| ||||||||    
T  28265519 ttccgtcactaattttcctcgctaatttt 28265491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 400 - 535
Target Start/End: Complemental strand, 36832035 - 36831900
Alignment:
Q  400 caaaagttagtgagggaaatttagtgagggaaaacatgaaatccctttctaantccgtcactaaattttgcgaccaaggaatttgtgaggaattttatgt 499  Q
    ||||| ||||||||||||||||||||||||||||  | |||||||| ||||| ||| ||||||||||||| ||||||||||||| |||||||||| || |    
T  36832035 caaaaattagtgagggaaatttagtgagggaaaatgtaaaatccctctctaattccatcactaaattttgtgaccaaggaatttatgaggaatttcattt 36831936  T
Q  500 tttctgtcacnaattnccctccctaattttgcnttt 535  Q
    |||  ||| | |||| ||||| |||||||||| |||    
T  36831935 ttttcgtccctaatttccctcactaattttgctttt 36831900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 406 - 535
Target Start/End: Original strand, 23408980 - 23409110
Alignment:
Q  406 ttagtgagggaaatttagtgagggaaaacatgaaatccctttctaantccgtcactaaattttgcgaccaaggaatttgtgaggaatttta-tgttttct 504  Q
    ||||||||||||||||||||||||||||| | |||||||| ||||| |||||||||||||||||||| |||| |||||||||||||||| | | |||||     
T  23408980 ttagtgagggaaatttagtgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgatcaagaaatttgtgaggaatttcatttttttcc 23409079  T
Q  505 gtcacnaattnccctccctaattttgcnttt 535  Q
    ||||| ||||   ||| |||||||||| |||    
T  23409080 gtcactaatttttctcgctaattttgctttt 23409110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 400 - 535
Target Start/End: Original strand, 5982639 - 5982775
Alignment:
Q  400 caaaagttagtgagggaaatttagtgagggaaaacatgaaatccctttctaantccgtcactaaattttgcgaccaaggaatttgtgaggaatttta-tg 498  Q
    ||||| ||| ||||| ||||||||||||||||||| | |||||||| ||||| |||||||||||| ||||||||||||||||||||||||||||  | |     
T  5982639 caaaaattaatgaggaaaatttagtgagggaaaacctaaaatccctctctaattccgtcactaaactttgcgaccaaggaatttgtgaggaattccattt 5982738  T
Q  499 ttttctgtcacnaattnccctccctaattttgcnttt 535  Q
    ||||| ||||| |||| ||||| || ||||||| |||    
T  5982739 ttttccgtcactaatttccctcgctgattttgctttt 5982775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 401 - 530
Target Start/End: Complemental strand, 10420396 - 10420267
Alignment:
Q  401 aaaagttagtgagggaaatttagtgagggaaaacatgaaatccctttctaantccgtcactaaattttgcgaccaaggaatttgtgaggaattttatgtt 500  Q
    |||| ||||||||| || ||||| ||||||||||||||||||||| ||||| |  |||||||||||||||||||||  || |||||||| ||||||| ||    
T  10420396 aaaaattagtgaggaaattttagagagggaaaacatgaaatccctctctaattttgtcactaaattttgcgaccaacaaaattgtgagggattttatttt 10420297  T
Q  501 ttctgtcacnaattnccctccctaattttg 530  Q
    ||| ||||| |||| ||||| |||||||||    
T  10420296 ttccgtcactaatttccctctctaattttg 10420267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 420 - 529
Target Start/End: Complemental strand, 16631999 - 16631890
Alignment:
Q  420 ttagtgagggaaaacatgaaatccctttctaantccgtcactaaattttgcgaccaaggaatttgtgaggaattttatgttttctgtcacnaattnccct 519  Q
    ||||||| ||||||| | |||||||| ||||| ||||||||||||||||| |||||||||||||||||||||||| || ||||| ||||| |||| ||||    
T  16631999 ttagtgaaggaaaacgtaaaatccctctctaattccgtcactaaattttgtgaccaaggaatttgtgaggaatttcattttttccgtcactaatttccct 16631900  T
Q  520 ccctaatttt 529  Q
    | ||||||||    
T  16631899 cgctaatttt 16631890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 400 - 503
Target Start/End: Original strand, 17079399 - 17079502
Alignment:
Q  400 caaaagttagtgagggaaatttagtgagggaaaacatgaaatccctttctaantccgtcactaaattttgcgaccaaggaatttgtgaggaattttatgt 499  Q
    ||||| ||||||||||||||||||  ||||||||||| |||||||| ||||| ||||||||||||||||||||||||| ||||||| ||| ||||||| |    
T  17079399 caaaaattagtgagggaaatttagaaagggaaaacatcaaatccctctctaattccgtcactaaattttgcgaccaagaaatttgtaagggattttattt 17079498  T
Q  500 tttc 503  Q
    ||||    
T  17079499 tttc 17079502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 400 - 535
Target Start/End: Complemental strand, 11927931 - 11927796
Alignment:
Q  400 caaaagttagtgagggaaatttagtgagggaaaacatgaaatccctttctaantccgtcactaaattttgcgaccaaggaatttgtgaggaattttatgt 499  Q
    ||||| |||||||||||| ||||| || ||||||| |||||||||| ||||| ||||||||||||||||||||| ||| ||||||||||| ||||||| |    
T  11927931 caaaaattagtgagggaattttagagacggaaaacgtgaaatccctctctaattccgtcactaaattttgcgacgaagtaatttgtgagggattttattt 11927832  T
Q  500 tttctgtcacnaattnccctccctaattttgcnttt 535  Q
    ||||  || | ||||   |||||||||||||| |||    
T  11927831 tttccatctctaatttatctccctaattttgctttt 11927796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 416 - 535
Target Start/End: Complemental strand, 24138970 - 24138851
Alignment:
Q  416 aaatttagtgagggaaaacatgaaatccctttctaantccgtcactaaattttgcgaccaaggaatttgtgaggaattttatgttttctgtcacnaattn 515  Q
    ||||||||||||||||||| | ||||| || ||||| ||||||||||||||||||||||||| |||||||||| ||||| || ||||| ||||| ||||     
T  24138970 aaatttagtgagggaaaacgtaaaatctctctctaattccgtcactaaattttgcgaccaagcaatttgtgagaaatttcattttttccgtcaccaattt 24138871  T
Q  516 ccctccctaattttgcnttt 535  Q
     |||| |||||||||| |||    
T  24138870 tcctcgctaattttgctttt 24138851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 420 - 535
Target Start/End: Complemental strand, 36597465 - 36597350
Alignment:
Q  420 ttagtgagggaaaacatgaaatccctttctaantccgtcactaaattttgcgaccaaggaatttgtgaggaattttatgttttctgtcacnaattnccct 519  Q
    ||||||||||||||||| |||| ||| ||||| || ||||||||||||| |||||||||||||||||||||||||||||||||| ||||  ||||   ||    
T  36597465 ttagtgagggaaaacataaaattcctctctaattctgtcactaaattttacgaccaaggaatttgtgaggaattttatgttttccgtcataaatttttct 36597366  T
Q  520 ccctaattttgcnttt 535  Q
    ||| |||||||| |||    
T  36597365 cccaaattttgctttt 36597350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 420 - 529
Target Start/End: Complemental strand, 4125313 - 4125204
Alignment:
Q  420 ttagtgagggaaaacatgaaatccctttctaantccgtcactaaattttgcgaccaaggaatttgtgaggaattttatgttttctgtcacnaattnccct 519  Q
    ||||||||||||||  ||||||| || ||||| ||||||||||||||||||||||| | |||||||||||||||| || ||||| ||||| |||| ||||    
T  4125313 ttagtgagggaaaatgtgaaatctctctctaattccgtcactaaattttgcgaccatgaaatttgtgaggaatttcattttttccgtcactaatttccct 4125214  T
Q  520 ccctaatttt 529  Q
    | ||||||||    
T  4125213 cgctaatttt 4125204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 420 - 529
Target Start/End: Complemental strand, 17772093 - 17771984
Alignment:
Q  420 ttagtgagggaaaacatgaaatccctttctaantccgtcactaaattttgcgaccaaggaatttgtgaggaattttatgttttctgtcacnaattnccct 519  Q
    ||||||||||||||||| ||||| || ||||| |||||||||||||||||||| |||||||||| |||||||||| || ||||| ||||| |||| ||||    
T  17772093 ttagtgagggaaaacataaaatctctctctaattccgtcactaaattttgcgatcaaggaatttttgaggaatttcattttttccgtcactaatttccct 17771994  T
Q  520 ccctaatttt 529  Q
    | || |||||    
T  17771993 cgctgatttt 17771984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 400 - 535
Target Start/End: Complemental strand, 13974223 - 13974088
Alignment:
Q  400 caaaagttagtgagggaaatttagtgagggaaaacatgaaatccctttctaantccgtcactaaattttgcgaccaaggaatttgtgaggaattttatgt 499  Q
    ||||| |||||||||||||||| |||||||||||| |||||||||| ||| | |||||||||||||||  |||||| | ||||||||| |||||| || |    
T  13974223 caaaaattagtgagggaaattttgtgagggaaaacgtgaaatccctctctgattccgtcactaaatttcacgaccatgaaatttgtgaagaatttcattt 13974124  T
Q  500 tttctgtcacnaattnccctccctaattttgcnttt 535  Q
    |||  ||| | |||| ||||| |||||||||| |||    
T  13974123 ttttcgtcgctaatttccctcgctaattttgctttt 13974088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 401 - 535
Target Start/End: Complemental strand, 20188085 - 20187951
Alignment:
Q  401 aaaagttagtgagggaaatttagtgagggaaaacatgaaatccctttctaantccgtcactaaattttgcgaccaaggaatttgtgaggaattttatgtt 500  Q
    |||| ||||||||  |||||||||||| |||||| |  |||| || ||||| || |||| |||||||||||| |||||||||||||||||||||||| ||    
T  20188085 aaaaattagtgagaaaaatttagtgagagaaaacgtagaatcactctctaattctgtcattaaattttgcgatcaaggaatttgtgaggaattttatttt 20187986  T
Q  501 ttctgtcacnaattnccctccctaattttgcnttt 535  Q
    ||| ||||| |||| || || |||||||||| |||    
T  20187985 ttccgtcactaatttccttcgctaattttgctttt 20187951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 406 - 536
Target Start/End: Complemental strand, 32726865 - 32726735
Alignment:
Q  406 ttagtgagggaaatttagtgagggaaaacatgaaatccctttctaantccgtcactaaattttgcgaccaaggaatttgtgaggaattttatgttttctg 505  Q
    ||||||| |||||||||| |||||||||  ||||||  || ||||| ||||||||||||||||||||||||||||||||| | |  |||||| |||||      
T  32726865 ttagtgaaggaaatttagagagggaaaatgtgaaatttctctctaattccgtcactaaattttgcgaccaaggaatttgtcaagggttttatattttcca 32726766  T
Q  506 tcacnaattnccctccctaattttgcntttc 536  Q
    |||| |||| | |||||||||||||| ||||    
T  32726765 tcactaatttcgctccctaattttgcttttc 32726735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 400 - 537
Target Start/End: Complemental strand, 3080841 - 3080704
Alignment:
Q  400 caaaagttagtgagggaaatttagtgagggaaaacatgaaatccctttctaantccgtcactaaattttgcgaccaaggaatttgtgaggaattttatgt 499  Q
    ||||| ||||||| | |||||||||||||||||||||||||||||| || || | | ||||||| ||||| ||| || |||||||||||  ||||||| |    
T  3080841 caaaaattagtgaagaaaatttagtgagggaaaacatgaaatccctctcaaatttcatcactaagttttgtgactaaagaatttgtgagagattttattt 3080742  T
Q  500 tttctgtcacnaattnccctccctaattttgcntttcc 537  Q
    ||||  |||| |||| |||| ||||||||||| |||||    
T  3080741 tttccatcacgaatttccctacctaattttgcttttcc 3080704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 400 - 537
Target Start/End: Complemental strand, 33735117 - 33734981
Alignment:
Q  400 caaaagttagtgagggaaatttagtgagggaaaacatgaaatccctttctaantccgtcactaaattttgcgaccaaggaatttgtgaggaattttatgt 499  Q
    ||||| |||||| ||||||||||  |||  ||||||||||| |||| | ||| ||||||||||||||||||||||||||||||| ||||| ||||||| |    
T  33735117 caaaaattagtgggggaaatttatagaga-aaaacatgaaacccctctttaattccgtcactaaattttgcgaccaaggaatttatgagggattttattt 33735019  T
Q  500 tttctgtcacnaattnccctccctaattttgcntttcc 537  Q
    ||||  |||  ||||  ||||||||||||||| |||||    
T  33735018 tttccctcattaattttcctccctaattttgcttttcc 33734981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 400 - 530
Target Start/End: Complemental strand, 36716345 - 36716215
Alignment:
Q  400 caaaagttagtgagggaaatttagtgagggaaaacatgaaatccctttctaantccgtcactaaattttgcgaccaaggaatttgtgaggaattttatgt 499  Q
    ||||| ||||||||| |||||| |||||||||||| |||||||| | ||||| ||| ||| |||||||| ||||||  ||||||||||||||||| || |    
T  36716345 caaaaattagtgaggaaaattttgtgagggaaaacgtgaaatccttctctaattccttcattaaattttacgaccatagaatttgtgaggaatttcattt 36716246  T
Q  500 tttctgtcacnaattnccctccctaattttg 530  Q
    ||||  |||| |||| ||||| |||||||||    
T  36716245 tttccatcactaatttccctcgctaattttg 36716215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 420 - 529
Target Start/End: Original strand, 40484058 - 40484167
Alignment:
Q  420 ttagtgagggaaaacatgaaatccctttctaantccgtcactaaattttgcgaccaaggaatttgtgaggaattttatgttttctgtcacnaattnccct 519  Q
    ||||||||||||||| | |||||||| ||||| ||||||||||||||||||||||||||||||| | || ||||| ||  |||| ||||| |||| ||||    
T  40484058 ttagtgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaaggaatttataagaaatttcattatttccgtcactaatttccct 40484157  T
Q  520 ccctaatttt 529  Q
    | ||||||||    
T  40484158 cgctaatttt 40484167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 420 - 529
Target Start/End: Original strand, 35778155 - 35778264
Alignment:
Q  420 ttagtgagggaaaacatgaaatccctttctaantccgtcactaaattttgcgaccaaggaatttgtgaggaattttatgttttctgtcacnaattnccct 519  Q
    |||||||||||||||||||||||||| ||| | || || | |||||||||||||||| |||||||||||  ||||||| |||||  |||| |||| ||||    
T  35778155 ttagtgagggaaaacatgaaatccctatctcattctgtgattaaattttgcgaccaatgaatttgtgagagattttattttttccatcactaatttccct 35778254  T
Q  520 ccctaatttt 529  Q
    ||| ||||||    
T  35778255 cccaaatttt 35778264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 418 - 537
Target Start/End: Complemental strand, 23974703 - 23974584
Alignment:
Q  418 atttagtgagggaaaacatgaaatccctttctaantccgtcactaaattttgcgaccaaggaatttgtgaggaattttatgttttctgtcacnaattncc 517  Q
    ||||||||||||||| |||  ||||||| ||||| | ||||| |||||||| |||| ||||||||||||||  ||||||| ||||| ||||| ||||  |    
T  23974703 atttagtgagggaaagcattcaatccctctctaatttcgtcattaaattttacgacaaaggaatttgtgagagattttattttttccgtcactaattttc 23974604  T
Q  518 ctccctaattttgcntttcc 537  Q
    || ||||||||| | |||||    
T  23974603 cttcctaatttttcttttcc 23974584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 400 - 514
Target Start/End: Original strand, 18413550 - 18413664
Alignment:
Q  400 caaaagttagtgagggaaatttagtgagggaaaacatgaaatccctttctaantccgtcactaaattttgcgaccaaggaatttgtgaggaattttatgt 499  Q
    ||||| |||||||||||||||||| |||||||||| |||| ||||||| ||| ||||||  |||||||| |||| ||| || |||||||  ||||||| |    
T  18413550 caaaaattagtgagggaaatttagagagggaaaacgtgaattccctttttaattccgtcgttaaattttacgactaagaaacttgtgagtgattttattt 18413649  T
Q  500 tttctgtcacnaatt 514  Q
    |||  ||||| ||||    
T  18413650 tttaagtcactaatt 18413664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 425 - 502
Target Start/End: Complemental strand, 31853208 - 31853131
Alignment:
Q  425 gagggaaaacatgaaatccctttctaantccgtcactaaattttgcgaccaaggaatttgtgaggaattttatgtttt 502  Q
    |||| ||||||||||||| || ||||| |||||||||||||||||||||||   ||||| ||||| ||||||| ||||    
T  31853208 gaggaaaaacatgaaatctctctctaattccgtcactaaattttgcgaccataaaatttatgagggattttatttttt 31853131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #55
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 420 - 514
Target Start/End: Original strand, 9024227 - 9024322
Alignment:
Q  420 ttagtgagggaaaacatgaaatccctttctaantcc-gtcactaaattttgcgaccaaggaatttgtgaggaattttatgttttctgtcacnaatt 514  Q
    ||||||||||| ||||||||||| || ||||| |   || |||||||||||||||||||||||||  |||| ||||||| ||||| ||||| ||||    
T  9024227 ttagtgagggataacatgaaatctctctctaaattatgttactaaattttgcgaccaaggaatttacgagggattttattttttccgtcactaatt 9024322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #56
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 400 - 463
Target Start/End: Complemental strand, 29727991 - 29727928
Alignment:
Q  400 caaaagttagtgagggaaatttagtgagggaaaacatgaaatccctttctaantccgtcactaa 463  Q
    ||||| ||||||||| |||||| | |||||||||| |||||| ||| ||||| |||||||||||    
T  29727991 caaaaattagtgaggcaaattttgcgagggaaaacgtgaaattcctctctaattccgtcactaa 29727928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #57
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 401 - 502
Target Start/End: Complemental strand, 16472325 - 16472223
Alignment:
Q  401 aaaagttagtgagggaaatttagtgagggaaaacatgaaatccctttctaantccgtcactaaa-ttttgcgaccaaggaatttgtgaggaattttatgt 499  Q
    |||| ||||||| |||||||||| |||| ||||  || |||| || ||||| || ||||||||| |||||||||||| |||||| ||| | ||||||| |    
T  16472325 aaaaattagtgacggaaatttagagaggaaaaaagtggaatcgctctctaattctgtcactaaacttttgcgaccaacgaatttttgaaggattttattt 16472226  T
Q  500 ttt 502  Q
    |||    
T  16472225 ttt 16472223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #58
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 412 - 514
Target Start/End: Complemental strand, 5043644 - 5043542
Alignment:
Q  412 agggaaatttagtgagggaaaacatgaaatccctttctaantccgtcactaaattttgcgaccaaggaatttgtgaggaattttatgttttctgtcacna 511  Q
    |||||||||||| |||| |||||  ||||| ||  ||||| |||| |||||||||||  ||| |   |||||||||| ||||| || ||||||||||| |    
T  5043644 agggaaatttagagaggaaaaacgcgaaattcccctctaattccgccactaaattttatgacgataaaatttgtgagaaatttcattttttctgtcacta 5043545  T
Q  512 att 514  Q
    |||    
T  5043544 att 5043542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #59
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 420 - 463
Target Start/End: Original strand, 16464692 - 16464735
Alignment:
Q  420 ttagtgagggaaaacatgaaatccctttctaantccgtcactaa 463  Q
    |||||||||||||||||||||| ||| ||||  |||||||||||    
T  16464692 ttagtgagggaaaacatgaaattcctctctatttccgtcactaa 16464735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 111; Significance: 9e-56; HSPs: 87)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 111; E-Value: 9e-56
Query Start/End: Original strand, 407 - 537
Target Start/End: Original strand, 19610335 - 19610465
Alignment:
Q  407 tagtgagggaaatttagtgagggaaaacatgaaatccctttctaantccgtcactaaattttgcgaccaaggaatttgtgaggaattttatgttttctgt 506  Q
    ||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| ||    
T  19610335 tagtgagggaaatttagtgagggaaaacatgaaatccctctctaattccgtcactaaattttgcgaccaaggaatttgtgaggaattttatgttttccgt 19610434  T
Q  507 cacnaattnccctccctaattttgcntttcc 537  Q
    ||| |||| |||||||||||||||| |||||    
T  19610435 cacaaatttccctccctaattttgcttttcc 19610465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 106; E-Value: 8e-53
Query Start/End: Original strand, 400 - 537
Target Start/End: Original strand, 16299851 - 16299988
Alignment:
Q  400 caaaagttagtgagggaaatttagtgagggaaaacatgaaatccctttctaantccgtcactaaattttgcgaccaaggaatttgtgaggaattttatgt 499  Q
    ||||| |||||||||||||||| ||||||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  16299851 caaaaattagtgagggaaatttggtgagggaaaacatgaaatccctctctaattccgtcactaaattttgcgaccaaggaatttgtgaggaattttatgt 16299950  T
Q  500 tttctgtcacnaattnccctccctaattttgcntttcc 537  Q
    |||| ||||| |||| | |||||||||||||| |||||    
T  16299951 tttccgtcacaaatttcgctccctaattttgcttttcc 16299988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 400 - 537
Target Start/End: Original strand, 29215982 - 29216119
Alignment:
Q  400 caaaagttagtgagggaaatttagtgagggaaaacatgaaatccctttctaantccgtcactaaattttgcgaccaaggaatttgtgaggaattttatgt 499  Q
    ||||| |||||||||||||||||||||||||||||||||||||||| ||||| ||| |||||||||||||||||||||||||||||||||||||||||||    
T  29215982 caaaaattagtgagggaaatttagtgagggaaaacatgaaatccctctctaattccatcactaaattttgcgaccaaggaatttgtgaggaattttatgt 29216081  T
Q  500 tttctgtcacnaattnccctccctaattttgcntttcc 537  Q
    |||| ||||| ||||  ||||| ||||||||| |||||    
T  29216082 tttccgtcacaaattttcctccataattttgcttttcc 29216119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 98; E-Value: 5e-48
Query Start/End: Original strand, 400 - 537
Target Start/End: Original strand, 30219328 - 30219465
Alignment:
Q  400 caaaagttagtgagggaaatttagtgagggaaaacatgaaatccctttctaantccgtcactaaattttgcgaccaaggaatttgtgaggaattttatgt 499  Q
    ||||| ||||||||||||||||||||||| |||||||||||||||| ||||| ||||||||||||||||||||||||  ||||| |||||||||||||||    
T  30219328 caaaaattagtgagggaaatttagtgaggaaaaacatgaaatccctctctaattccgtcactaaattttgcgaccaaaaaatttatgaggaattttatgt 30219427  T
Q  500 tttctgtcacnaattnccctccctaattttgcntttcc 537  Q
    |||| ||||| |||| |||||||||||||||| |||||    
T  30219428 tttccgtcacaaatttccctccctaattttgcttttcc 30219465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 420 - 537
Target Start/End: Complemental strand, 15064117 - 15064000
Alignment:
Q  420 ttagtgagggaaaacatgaaatccctttctaantccgtcactaaattttgcgaccaaggaatttgtgaggaattttatgttttctgtcacnaattnccct 519  Q
    ||||||||||||||||||||||| || ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||| ||||    
T  15064117 ttagtgagggaaaacatgaaatctctctctaattccgtcactaaattttgcgaccaaggaatttgtgaggaattttatgttttccgtcacaaatttccct 15064018  T
Q  520 ccctaattttgcntttcc 537  Q
    |||||||||||| |||||    
T  15064017 ccctaattttgcttttcc 15064000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 88; E-Value: 5e-42
Query Start/End: Original strand, 400 - 535
Target Start/End: Complemental strand, 18104675 - 18104540
Alignment:
Q  400 caaaagttagtgagggaaatttagtgagggaaaacatgaaatccctttctaantccgtcactaaattttgcgaccaaggaatttgtgaggaattttatgt 499  Q
    ||||| |||||||||||||||| ||||||||||||||||||||||| ||||| ||||||||||||||||||||||| |||||||||||||||||| || |    
T  18104675 caaaaattagtgagggaaattttgtgagggaaaacatgaaatccctctctaattccgtcactaaattttgcgaccatggaatttgtgaggaatttaattt 18104576  T
Q  500 tttctgtcacnaattnccctccctaattttgcnttt 535  Q
    |||| ||||  |||| ||||| |||||||||| |||    
T  18104575 tttccgtcaataatttccctcgctaattttgctttt 18104540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 88; E-Value: 5e-42
Query Start/End: Original strand, 400 - 535
Target Start/End: Complemental strand, 19270009 - 19269874
Alignment:
Q  400 caaaagttagtgagggaaatttagtgagggaaaacatgaaatccctttctaantccgtcactaaattttgcgaccaaggaatttgtgaggaattttatgt 499  Q
    ||||| ||||||||||||||||||||||||||||| | |||||||| | ||| |||||||||||||||||||||||||||||||||||||||||| || |    
T  19270009 caaaaattagtgagggaaatttagtgagggaaaacgtaaaatccctctttaattccgtcactaaattttgcgaccaaggaatttgtgaggaatttcattt 19269910  T
Q  500 tttctgtcacnaattnccctccctaattttgcnttt 535  Q
    |||| ||||| |||| ||||| |||||||||| |||    
T  19269909 tttccgtcactaatttccctcgctaattttgctttt 19269874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 88; E-Value: 5e-42
Query Start/End: Original strand, 400 - 535
Target Start/End: Original strand, 27449078 - 27449213
Alignment:
Q  400 caaaagttagtgagggaaatttagtgagggaaaacatgaaatccctttctaantccgtcactaaattttgcgaccaaggaatttgtgaggaattttatgt 499  Q
    ||||| ||||||||||||||||||||||||||||| | |||||||| ||||| |||||||||||||||||||||||| ||||||||||||||||| || |    
T  27449078 caaaaattagtgagggaaatttagtgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgaggaatttcattt 27449177  T
Q  500 tttctgtcacnaattnccctccctaattttgcnttt 535  Q
    |||| ||||| |||| ||||| |||||||||| |||    
T  27449178 tttccgtcactaatttccctcgctaattttgctttt 27449213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 86; E-Value: 7e-41
Query Start/End: Original strand, 406 - 535
Target Start/End: Original strand, 5260933 - 5261062
Alignment:
Q  406 ttagtgagggaaatttagtgagggaaaacatgaaatccctttctaantccgtcactaaattttgcgaccaaggaatttgtgaggaattttatgttttctg 505  Q
    |||||||||||||| |||||||||||||| | |||||||| ||||| |||||||||||||||||||||||||||||||||||||||||| || ||||| |    
T  5260933 ttagtgagggaaatatagtgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaaggaatttgtgaggaatttcattttttccg 5261032  T
Q  506 tcacnaattnccctccctaattttgcnttt 535  Q
    |||| |||| ||||| |||||||||| |||    
T  5261033 tcactaatttccctcactaattttgctttt 5261062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 86; E-Value: 7e-41
Query Start/End: Original strand, 400 - 530
Target Start/End: Original strand, 17762632 - 17762762
Alignment:
Q  400 caaaagttagtgagggaaatttagtgagggaaaacatgaaatccctttctaantccgtcactaaattttgcgaccaaggaatttgtgaggaattttatgt 499  Q
    ||||| ||||||||||| ||||||||||||||||||||||||| || ||||| ||||||||||||||||| |||||||||||||||||||||||| || |    
T  17762632 caaaaattagtgagggatatttagtgagggaaaacatgaaatcgctctctaattccgtcactaaattttgtgaccaaggaatttgtgaggaatttcattt 17762731  T
Q  500 tttctgtcacnaattnccctccctaattttg 530  Q
    |||| ||||| |||| ||||| |||||||||    
T  17762732 tttccgtcactaatttccctcgctaattttg 17762762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 86; E-Value: 7e-41
Query Start/End: Original strand, 400 - 530
Target Start/End: Original strand, 19063952 - 19064082
Alignment:
Q  400 caaaagttagtgagggaaatttagtgagggaaaacatgaaatccctttctaantccgtcactaaattttgcgaccaaggaatttgtgaggaattttatgt 499  Q
    ||||| ||||||||||| ||||||||||||||||||||||||| || ||||| ||||||||||||||||| |||||||||||||||||||||||| || |    
T  19063952 caaaaattagtgagggatatttagtgagggaaaacatgaaatcgctctctaattccgtcactaaattttgtgaccaaggaatttgtgaggaatttcattt 19064051  T
Q  500 tttctgtcacnaattnccctccctaattttg 530  Q
    |||| ||||| |||| ||||| |||||||||    
T  19064052 tttccgtcactaatttccctcgctaattttg 19064082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 86; E-Value: 7e-41
Query Start/End: Original strand, 406 - 535
Target Start/End: Original strand, 25882566 - 25882695
Alignment:
Q  406 ttagtgagggaaatttagtgagggaaaacatgaaatccctttctaantccgtcactaaattttgcgaccaaggaatttgtgaggaattttatgttttctg 505  Q
    ||||||||||| |||||||||||||||||||||||||||| ||||| |||||||||||||||| ||||||| ||||||||||||||||| || ||||| |    
T  25882566 ttagtgagggatatttagtgagggaaaacatgaaatccctctctaattccgtcactaaattttacgaccaaagaatttgtgaggaatttcattttttccg 25882665  T
Q  506 tcacnaattnccctccctaattttgcnttt 535  Q
    |||| |||| ||||| |||||||||| |||    
T  25882666 tcactaatttccctcgctaattttgctttt 25882695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 400 - 529
Target Start/End: Original strand, 8428161 - 8428290
Alignment:
Q  400 caaaagttagtgagggaaatttagtgagggaaaacatgaaatccctttctaantccgtcactaaattttgcgaccaaggaatttgtgaggaattttatgt 499  Q
    ||||| ||||||||||| ||||||||||||||||||||||||| || ||||| |||||||||||||||| ||||||||||||||||||||||||| || |    
T  8428161 caaaaattagtgagggatatttagtgagggaaaacatgaaatctctctctaattccgtcactaaattttacgaccaaggaatttgtgaggaatttcattt 8428260  T
Q  500 tttctgtcacnaattnccctccctaatttt 529  Q
    |||| ||||| |||| ||||| ||||||||    
T  8428261 tttccgtcactaatttccctcgctaatttt 8428290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 400 - 529
Target Start/End: Original strand, 49915441 - 49915570
Alignment:
Q  400 caaaagttagtgagggaaatttagtgagggaaaacatgaaatccctttctaantccgtcactaaattttgcgaccaaggaatttgtgaggaattttatgt 499  Q
    ||||| |||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||||||| ||| ||||||| ||| |||||||||    
T  49915441 caaaaattagtgagggaaatttagtgagggaaaacatgaaatccctctctaattccgtcactaaattttgcgactaagaaatttgttagggattttatgt 49915540  T
Q  500 tttctgtcacnaattnccctccctaatttt 529  Q
    |||| ||||| |||| |||||  |||||||    
T  49915541 tttccgtcacaaatttccctctttaatttt 49915570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 400 - 535
Target Start/End: Original strand, 11915748 - 11915883
Alignment:
Q  400 caaaagttagtgagggaaatttagtgagggaaaacatgaaatccctttctaantccgtcactaaattttgcgaccaaggaatttgtgaggaattttatgt 499  Q
    ||||| ||||||||||||||||||||||||||||| | |||||||| ||||| ||||||||||||||||||||||||| ||||| |||||||||| || |    
T  11915748 caaaatttagtgagggaaatttagtgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaagaaatttatgaggaatttcatat 11915847  T
Q  500 tttctgtcacnaattnccctccctaattttgcnttt 535  Q
    |||| ||||| |||| ||||| |||||||||| |||    
T  11915848 tttccgtcactaatttccctcgctaattttgctttt 11915883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 400 - 535
Target Start/End: Complemental strand, 18091692 - 18091557
Alignment:
Q  400 caaaagttagtgagggaaatttagtgagggaaaacatgaaatccctttctaantccgtcactaaattttgcgaccaaggaatttgtgaggaattttatgt 499  Q
    ||||| ||||||||||| ||||||||||||||||||| |||||||| ||||| ||||||||||||||||||||||||  |||||||||||||||| || |    
T  18091692 caaaaattagtgagggatatttagtgagggaaaacataaaatccctctctaattccgtcactaaattttgcgaccaaaaaatttgtgaggaatttcattt 18091593  T
Q  500 tttctgtcacnaattnccctccctaattttgcnttt 535  Q
    |||| ||||| |||| ||||| |||||||||| |||    
T  18091592 tttccgtcactaatttccctcgctaattttgctttt 18091557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 420 - 537
Target Start/End: Original strand, 5744426 - 5744543
Alignment:
Q  420 ttagtgagggaaaacatgaaatccctttctaantccgtcactaaattttgcgaccaaggaatttgtgaggaattttatgttttctgtcacnaattnccct 519  Q
    ||||||||||||||||||||||| || ||||| ||||||||||||||||||||| ||||||||||||||| ||||||||||||| ||||| ||||  |||    
T  5744426 ttagtgagggaaaacatgaaatctctctctaattccgtcactaaattttgcgactaaggaatttgtgaggcattttatgttttccgtcacaaattttcct 5744525  T
Q  520 ccctaattttgcntttcc 537  Q
    |||||||||||| |||||    
T  5744526 ccctaattttgcttttcc 5744543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 420 - 537
Target Start/End: Original strand, 5781385 - 5781502
Alignment:
Q  420 ttagtgagggaaaacatgaaatccctttctaantccgtcactaaattttgcgaccaaggaatttgtgaggaattttatgttttctgtcacnaattnccct 519  Q
    ||||||||||||||||||||||| || ||||| ||||||||||||||||||||| ||||||||||||||| ||||||||||||| ||||| ||||  |||    
T  5781385 ttagtgagggaaaacatgaaatctctctctaattccgtcactaaattttgcgactaaggaatttgtgaggcattttatgttttccgtcacaaattttcct 5781484  T
Q  520 ccctaattttgcntttcc 537  Q
    |||||||||||| |||||    
T  5781485 ccctaattttgcttttcc 5781502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 406 - 535
Target Start/End: Original strand, 19223445 - 19223574
Alignment:
Q  406 ttagtgagggaaatttagtgagggaaaacatgaaatccctttctaantccgtcactaaattttgcgaccaaggaatttgtgaggaattttatgttttctg 505  Q
    |||||||||||||||||||| |||||||| | |||||||| ||||| |||||||||||||||| ||||||||||||||||||||||||| || ||||| |    
T  19223445 ttagtgagggaaatttagtgggggaaaacgtaaaatccctctctaattccgtcactaaattttacgaccaaggaatttgtgaggaatttcattttttccg 19223544  T
Q  506 tcacnaattnccctccctaattttgcnttt 535  Q
    |||| |||| ||||| |||||||||| |||    
T  19223545 tcaccaatttccctcgctaattttgctttt 19223574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 400 - 537
Target Start/End: Original strand, 21020055 - 21020192
Alignment:
Q  400 caaaagttagtgagggaaatttagtgagggaaaacatgaaatccctttctaantccgtcactaaattttgcgaccaaggaatttgtgaggaattttatgt 499  Q
    ||||| |||||||||| | |||||||||||||||||| |||||| | ||||| |||||||||||||||||| |||||||||||||||||  ||||||| |    
T  21020055 caaaaattagtgagggcagtttagtgagggaaaacataaaatccttctctaattccgtcactaaattttgcaaccaaggaatttgtgagagattttattt 21020154  T
Q  500 tttctgtcacnaattnccctccctaattttgcntttcc 537  Q
    |||| ||||| |||| |||||||||||||||| |||||    
T  21020155 tttccgtcactaatttccctccctaattttgcttttcc 21020192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 81; E-Value: 7e-38
Query Start/End: Original strand, 400 - 514
Target Start/End: Complemental strand, 17582446 - 17582332
Alignment:
Q  400 caaaagttagtgagggaaatttagtgagggaaaacatgaaatccctttctaantccgtcactaaattttgcgaccaaggaatttgtgaggaattttatgt 499  Q
    ||||| |||||||||||||||| |||||||||||| |||||||||| ||||| ||||||||||||||||||||||| ||||||||||||||||||||| |    
T  17582446 caaaaattagtgagggaaattttgtgagggaaaacgtgaaatccctctctaattccgtcactaaattttgcgaccatggaatttgtgaggaattttattt 17582347  T
Q  500 tttctgtcacnaatt 514  Q
    |||| ||||| ||||    
T  17582346 tttccgtcactaatt 17582332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 400 - 535
Target Start/End: Original strand, 8110329 - 8110464
Alignment:
Q  400 caaaagttagtgagggaaatttagtgagggaaaacatgaaatccctttctaantccgtcactaaattttgcgaccaaggaatttgtgaggaattttatgt 499  Q
    ||||| ||||||||||||||||||||||||||||| | |||| ||| ||||| ||||||| |||||||| ||||||||||||||||||||||||| || |    
T  8110329 caaaaattagtgagggaaatttagtgagggaaaacgtaaaattcctctctaattccgtcattaaattttccgaccaaggaatttgtgaggaatttcattt 8110428  T
Q  500 tttctgtcacnaattnccctccctaattttgcnttt 535  Q
    |||| ||||| |||| ||||| |||||||||| |||    
T  8110429 tttccgtcactaatttccctcactaattttgctttt 8110464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 400 - 535
Target Start/End: Original strand, 18539794 - 18539929
Alignment:
Q  400 caaaagttagtgagggaaatttagtgagggaaaacatgaaatccctttctaantccgtcactaaattttgcgaccaaggaatttgtgaggaattttatgt 499  Q
    ||||| |||||||||||||||| |||||||||||| |||||||||| ||||| ||||||||||||||||||||||| | ||||| |||||||||| || |    
T  18539794 caaaaattagtgagggaaattttgtgagggaaaacgtgaaatccctctctaattccgtcactaaattttgcgaccatgaaatttttgaggaatttcattt 18539893  T
Q  500 tttctgtcacnaattnccctccctaattttgcnttt 535  Q
    |||| ||||| |||| ||||| |||||||||| |||    
T  18539894 tttccgtcactaatttccctctctaattttgctttt 18539929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 420 - 535
Target Start/End: Original strand, 26098823 - 26098938
Alignment:
Q  420 ttagtgagggaaaacatgaaatccctttctaantccgtcactaaattttgcgaccaaggaatttgtgaggaattttatgttttctgtcacnaattnccct 519  Q
    |||||||||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||| || |||||  |||| |||| ||||    
T  26098823 ttagtgagggaaaacatgaaatccctctctaattccgtcactaaattttgcgaccaaggaatttgtgaggaatttcattttttccatcactaatttccct 26098922  T
Q  520 ccctaattttgcnttt 535  Q
    | |||||||||| |||    
T  26098923 cgctaattttgctttt 26098938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 400 - 535
Target Start/End: Complemental strand, 26390779 - 26390644
Alignment:
Q  400 caaaagttagtgagggaaatttagtgagggaaaacatgaaatccctttctaantccgtcactaaattttgcgaccaaggaatttgtgaggaattttatgt 499  Q
    ||||| ||||||||||| |||| |||||||| |||||||||||||| ||||| ||||||||||||||||| |||||||||||||||||||||||| || |    
T  26390779 caaaaattagtgagggatattttgtgagggataacatgaaatccctctctaattccgtcactaaattttgtgaccaaggaatttgtgaggaatttcattt 26390680  T
Q  500 tttctgtcacnaattnccctccctaattttgcnttt 535  Q
    |||| ||||| |||| | ||| |||||||||| |||    
T  26390679 tttccgtcactaatttctctcgctaattttgctttt 26390644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 416 - 535
Target Start/End: Original strand, 48404866 - 48404985
Alignment:
Q  416 aaatttagtgagggaaaacatgaaatccctttctaantccgtcactaaattttgcgaccaaggaatttgtgaggaattttatgttttctgtcacnaattn 515  Q
    ||||||||||||||||||| | |||||||| ||||| |||||||||||||||||||||||||||||||||||||||||| || ||||| ||||| ||||     
T  48404866 aaatttagtgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaaggaatttgtgaggaatttcattttttccgtcactaattt 48404965  T
Q  516 ccctccctaattttgcnttt 535  Q
    ||||| |||||||||| |||    
T  48404966 ccctcgctaattttgctttt 48404985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 401 - 535
Target Start/End: Complemental strand, 11007827 - 11007693
Alignment:
Q  401 aaaagttagtgagggaaatttagtgagggaaaacatgaaatccctttctaantccgtcactaaattttgcgaccaaggaatttgtgaggaattttatgtt 500  Q
    |||| ||||||||||||||||||||||||||||| | |||||||| ||||| ||||||||||||||||||||||||| ||||||||| |||||| || ||    
T  11007827 aaaaattagtgagggaaatttagtgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaagaaatttgtgacgaatttcatttt 11007728  T
Q  501 ttctgtcacnaattnccctccctaattttgcnttt 535  Q
    ||| ||||| |||| ||||  |||||||||| |||    
T  11007727 ttccgtcactaatttcccttactaattttgctttt 11007693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 400 - 529
Target Start/End: Original strand, 29956362 - 29956491
Alignment:
Q  400 caaaagttagtgagggaaatttagtgagggaaaacatgaaatccctttctaantccgtcactaaattttgcgaccaaggaatttgtgaggaattttatgt 499  Q
    ||||| ||| |||||||||||| |||||||||||  |||||||||||||||| ||||||||||||||||||||||| |||||||||||||||||| || |    
T  29956362 caaaaattaatgagggaaattttgtgagggaaaatgtgaaatccctttctaattccgtcactaaattttgcgaccatggaatttgtgaggaatttcattt 29956461  T
Q  500 tttctgtcacnaattnccctccctaatttt 529  Q
    ||||  |||| |||| ||||| ||||||||    
T  29956462 tttccatcactaatttccctcgctaatttt 29956491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 400 - 529
Target Start/End: Original strand, 30005517 - 30005646
Alignment:
Q  400 caaaagttagtgagggaaatttagtgagggaaaacatgaaatccctttctaantccgtcactaaattttgcgaccaaggaatttgtgaggaattttatgt 499  Q
    ||||| ||| |||||||||||| |||||||||||  |||||||||||||||| ||||||||||||||||||||||| |||||||||||||||||| || |    
T  30005517 caaaaattaatgagggaaattttgtgagggaaaatgtgaaatccctttctaattccgtcactaaattttgcgaccatggaatttgtgaggaatttcattt 30005616  T
Q  500 tttctgtcacnaattnccctccctaatttt 529  Q
    ||||  |||| |||| ||||| ||||||||    
T  30005617 tttccatcactaatttccctcgctaatttt 30005646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 420 - 536
Target Start/End: Complemental strand, 50665761 - 50665645
Alignment:
Q  420 ttagtgagggaaaacatgaaatccctttctaantccgtcactaaattttgcgaccaaggaatttgtgaggaattttatgttttctgtcacnaattnccct 519  Q
    |||||||||||||||||||||||||| ||||| | |||||||||||||||||| ||| |||||||||||||||||||||||||| ||||  |||| ||||    
T  50665761 ttagtgagggaaaacatgaaatccctctctaatttcgtcactaaattttgcgatcaaagaatttgtgaggaattttatgttttccgtcataaatttccct 50665662  T
Q  520 ccctaattttgcntttc 536  Q
    | |||||||||| ||||    
T  50665661 ctctaattttgcttttc 50665645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 76; E-Value: 7e-35
Query Start/End: Original strand, 400 - 535
Target Start/End: Complemental strand, 4393495 - 4393360
Alignment:
Q  400 caaaagttagtgagggaaatttagtgagggaaaacatgaaatccctttctaantccgtcactaaattttgcgaccaaggaatttgtgaggaattttatgt 499  Q
    ||||| |||||||||||||||| |||||||||||| |||||||||| ||||| ||||||||||||||||||||||  | |||||||||| ||||| || |    
T  4393495 caaaaattagtgagggaaattttgtgagggaaaacgtgaaatccctctctaattccgtcactaaattttgcgaccgtgaaatttgtgagaaatttcattt 4393396  T
Q  500 tttctgtcacnaattnccctccctaattttgcnttt 535  Q
    |||| ||||| |||| ||||| |||||||||| |||    
T  4393395 tttccgtcactaatttccctcactaattttgctttt 4393360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 76; E-Value: 7e-35
Query Start/End: Original strand, 400 - 535
Target Start/End: Original strand, 9652568 - 9652703
Alignment:
Q  400 caaaagttagtgagggaaatttagtgagggaaaacatgaaatccctttctaantccgtcactaaattttgcgaccaaggaatttgtgaggaattttatgt 499  Q
    ||||| |||||||||||||||| |||||||||||| |||||||||| ||||| ||||||||||||||||||||| | | |||||||||||||||| || |    
T  9652568 caaaaattagtgagggaaattttgtgagggaaaacgtgaaatccctctctaattccgtcactaaattttgcgactatgaaatttgtgaggaatttcattt 9652667  T
Q  500 tttctgtcacnaattnccctccctaattttgcnttt 535  Q
    |||| ||||| |||| ||||| | |||||||| |||    
T  9652668 tttccgtcactaatttccctcgccaattttgctttt 9652703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 76; E-Value: 7e-35
Query Start/End: Original strand, 416 - 535
Target Start/End: Original strand, 13921331 - 13921450
Alignment:
Q  416 aaatttagtgagggaaaacatgaaatccctttctaantccgtcactaaattttgcgaccaaggaatttgtgaggaattttatgttttctgtcacnaattn 515  Q
    ||||||||||||||||||| | |||||||| ||||| |||||||||||||||||||||||||||||||||||||||||| || ||||| ||||| ||||     
T  13921331 aaatttagtgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaaggaatttgtgaggaatttcattttttccgtcactaattt 13921430  T
Q  516 ccctccctaattttgcnttt 535  Q
     |||| |||||||||| |||    
T  13921431 tcctcgctaattttgctttt 13921450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 406 - 514
Target Start/End: Original strand, 19545506 - 19545614
Alignment:
Q  406 ttagtgagggaaatttagtgagggaaaacatgaaatccctttctaantccgtcactaaattttgcgaccaaggaatttgtgaggaattttatgttttctg 505  Q
    ||||||||||||||||||||||| ||||| | |||||||| ||||| |||||||||||||||||||||||||||||||||||||||||| || ||||| |    
T  19545506 ttagtgagggaaatttagtgaggaaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaaggaatttgtgaggaatttcattttttccg 19545605  T
Q  506 tcacnaatt 514  Q
    |||| ||||    
T  19545606 tcactaatt 19545614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 418 - 535
Target Start/End: Complemental strand, 10941792 - 10941675
Alignment:
Q  418 atttagtgagggaaaacatgaaatccctttctaantccgtcactaaattttgcgaccaaggaatttgtgaggaattttatgttttctgtcacnaattncc 517  Q
    ||||| |||||||||||||||||||||| ||||| ||| |||||||||||||||||||||||||||||||||||||| || ||||| ||||| |||| ||    
T  10941792 atttaatgagggaaaacatgaaatccctctctaattccatcactaaattttgcgaccaaggaatttgtgaggaatttcattttttccgtcactaatttcc 10941693  T
Q  518 ctccctaattttgcnttt 535  Q
    ||  |||||||||| |||    
T  10941692 cttactaattttgctttt 10941675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 400 - 529
Target Start/End: Complemental strand, 26830587 - 26830457
Alignment:
Q  400 caaaagttagtgagggaaatttagtgagggaaaacatgaaatccctttctaantccgtcactaaattttgcgaccaaggaatttgtgaggaatttta-tg 498  Q
    ||||| |||||||||||||||||| |||||||||| |||||||||| ||||| |||||||| |||||||||||||| |||||||||||||||||||| |     
T  26830587 caaaaattagtgagggaaatttagagagggaaaacgtgaaatccctctctaattccgtcacaaaattttgcgaccatggaatttgtgaggaattttattt 26830488  T
Q  499 ttttctgtcacnaattnccctccctaatttt 529  Q
    ||||| ||||  ||||  |||||||||||||    
T  26830487 ttttccgtcattaattttcctccctaatttt 26830457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 436 - 537
Target Start/End: Original strand, 37283549 - 37283650
Alignment:
Q  436 tgaaatccctttctaantccgtcactaaattttgcgaccaaggaatttgtgaggaattttatgttttctgtcacnaattnccctccctaattttgcnttt 535  Q
    |||||||||| ||||| ||||||||||||||||  ||||||||||||||||||||||||||||||||| ||||| |||| |||||||||||||||| |||    
T  37283549 tgaaatccctctctaattccgtcactaaattttatgaccaaggaatttgtgaggaattttatgttttccgtcacaaatttccctccctaattttgctttt 37283648  T
Q  536 cc 537  Q
    ||    
T  37283649 cc 37283650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 407 - 535
Target Start/End: Complemental strand, 1311097 - 1310969
Alignment:
Q  407 tagtgagggaaatttagtgagggaaaacatgaaatccctttctaantccgtcactaaattttgcgaccaaggaatttgtgaggaattttatgttttctgt 506  Q
    |||||||||||||||||||| ||||||| | |||||||| ||||| |||||||||||||||||||||||||||||||||||||| ||| || ||||| ||    
T  1311097 tagtgagggaaatttagtgatggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaaggaatttgtgaggattttcattttttccgt 1310998  T
Q  507 cacnaattnccctccctaattttgcnttt 535  Q
    ||| ||||  |||  |||||||||| |||    
T  1310997 cactaattttccttgctaattttgctttt 1310969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 416 - 529
Target Start/End: Original strand, 21816727 - 21816840
Alignment:
Q  416 aaatttagtgagggaaaacatgaaatccctttctaantccgtcactaaattttgcgaccaaggaatttgtgaggaattttatgttttctgtcacnaattn 515  Q
    ||||||||||||||||||| | |||| ||| ||||| |||||||||||||||||||||||||||||||||||||||||| || ||||| ||||| ||||     
T  21816727 aaatttagtgagggaaaacgtaaaattcctctctaattccgtcactaaattttgcgaccaaggaatttgtgaggaatttcattttttccgtcactaattt 21816826  T
Q  516 ccctccctaatttt 529  Q
    ||||| ||||||||    
T  21816827 ccctcgctaatttt 21816840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 400 - 529
Target Start/End: Original strand, 36543739 - 36543868
Alignment:
Q  400 caaaagttagtgagggaaatttagtgagggaaaacatgaaatccctttctaantccgtcactaaattttgcgaccaaggaatttgtgaggaattttatgt 499  Q
    ||||| |||||||||||||||| ||||||||||||||||||||||| ||||| | |||||||||||||||||||||| |||| ||||||  ||||||| |    
T  36543739 caaaaattagtgagggaaattttgtgagggaaaacatgaaatccctctctaatttcgtcactaaattttgcgaccaaagaatctgtgagagattttattt 36543838  T
Q  500 tttctgtcacnaattnccctccctaatttt 529  Q
    ||||  |||| ||||  |||||||||||||    
T  36543839 tttccatcactaattttcctccctaatttt 36543868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 401 - 529
Target Start/End: Original strand, 1628206 - 1628334
Alignment:
Q  401 aaaagttagtgagggaaatttagtgagggaaaacatgaaatccctttctaantccgtcactaaattttgcgaccaaggaatttgtgaggaattttatgtt 500  Q
    |||| |||||||||||||||||| |||||||||| |||||||||| ||||| | |||||||||||||| |||| ||||||||| ||||||||||||| ||    
T  1628206 aaaaattagtgagggaaatttagagagggaaaacgtgaaatccctctctaatttcgtcactaaattttacgactaaggaatttatgaggaattttatttt 1628305  T
Q  501 ttctgtcacnaattnccctccctaatttt 529  Q
    |||  |||  |||| ||||||||||||||    
T  1628306 ttccatcattaatttccctccctaatttt 1628334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 401 - 514
Target Start/End: Original strand, 28389964 - 28390077
Alignment:
Q  401 aaaagttagtgagggaaatttagtgagggaaaacatgaaatccctttctaantccgtcactaaattttgcgaccaaggaatttgtgaggaattttatgtt 500  Q
    |||| ||||||||||||||||||||||||||||| |||||||| | ||||| |||||||||||||||||||||||| |||||||||||  ||||||| ||    
T  28389964 aaaaattagtgagggaaatttagtgagggaaaacgtgaaatccttctctaattccgtcactaaattttgcgaccaacgaatttgtgagagattttatttt 28390063  T
Q  501 ttctgtcacnaatt 514  Q
    ||| ||||| ||||    
T  28390064 ttccgtcactaatt 28390077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 409 - 535
Target Start/End: Original strand, 31250087 - 31250213
Alignment:
Q  409 gtgagggaaatttagtgagggaaaacatgaaatccctttctaantccgtcactaaattttgcgaccaaggaatttgtgaggaattttatgttttctgtca 508  Q
    ||||||||||||||| |||||||||||  |||||||| ||||| || |||||||||||||||||||||| ||||||| ||||||||||| ||||| ||||    
T  31250087 gtgagggaaatttagagagggaaaacacaaaatccctctctaattctgtcactaaattttgcgaccaagaaatttgtaaggaattttattttttccgtca 31250186  T
Q  509 cnaattnccctccctaattttgcnttt 535  Q
    | |||   ||||||||||||||| |||    
T  31250187 ctaatcttcctccctaattttgcattt 31250213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 416 - 536
Target Start/End: Original strand, 21088758 - 21088876
Alignment:
Q  416 aaatttagtgagggaaaacatgaaatccctttctaantccgtcactaaattttgcgaccaaggaatttgtgaggaattttatgttttctgtcacnaattn 515  Q
    |||||||||||||||||||||||||||||| || || |||||||  |||||||||||||||||||||||||||  ||||||| ||||| ||||| ||||     
T  21088758 aaatttagtgagggaaaacatgaaatccctctcgaattccgtcatcaaattttgcgaccaaggaatttgtgag--attttattttttccgtcactaattt 21088855  T
Q  516 ccctccctaattttgcntttc 536  Q
    |||||||||| ||||| ||||    
T  21088856 ccctccctaactttgcttttc 21088876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 400 - 529
Target Start/End: Complemental strand, 7623676 - 7623547
Alignment:
Q  400 caaaagttagtgagggaaatttagtgagggaaaacatgaaatccctttctaantccgtcactaaattttgcgaccaaggaatttgtgaggaattttatgt 499  Q
    ||||| |||||||||||||||| |||||||||||  |||||||||| ||||| |||||||||||||||||||||||| |||| |||||| ||||| || |    
T  7623676 caaaaattagtgagggaaattttgtgagggaaaatgtgaaatccctctctaattccgtcactaaattttgcgaccaaagaatctgtgagaaatttcattt 7623577  T
Q  500 tttctgtcacnaattnccctccctaatttt 529  Q
    |||| ||||| |||| ||||| || |||||    
T  7623576 tttccgtcactaatttccctcgctgatttt 7623547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 400 - 529
Target Start/End: Original strand, 31433727 - 31433856
Alignment:
Q  400 caaaagttagtgagggaaatttagtgagggaaaacatgaaatccctttctaantccgtcactaaattttgcgaccaaggaatttgtgaggaattttatgt 499  Q
    ||||| |||||||||||| |||||  ||||||||| |||||| ||| ||||| |||||||||||||||| ||||||||||||||||||| |||||||| |    
T  31433727 caaaaattagtgagggaattttagaaagggaaaacgtgaaattcctctctaattccgtcactaaattttacgaccaaggaatttgtgagaaattttattt 31433826  T
Q  500 tttctgtcacnaattnccctccctaatttt 529  Q
    ||||| |||| |||| ||||  ||||||||    
T  31433827 tttctatcactaatttccctatctaatttt 31433856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 409 - 530
Target Start/End: Original strand, 46942486 - 46942607
Alignment:
Q  409 gtgagggaaatttagtgagggaaaacatgaaatccctttctaantccgtcactaaattttgcgaccaaggaatttgtgaggaattttatgttttctgtca 508  Q
    ||||||||| ||||| |||||||||| |||||||||| ||||| || |||||||||||||||||||||| || |||||||| |||| || ||||||||||    
T  46942486 gtgagggaattttagagagggaaaacgtgaaatccctctctaattctgtcactaaattttgcgaccaagaaaattgtgagggatttaattttttctgtca 46942585  T
Q  509 cnaattnccctccctaattttg 530  Q
    | |||| || ||||||||||||    
T  46942586 ctaatttccttccctaattttg 46942607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 420 - 535
Target Start/End: Complemental strand, 1745612 - 1745498
Alignment:
Q  420 ttagtgagggaaaacatgaaatccctttctaantccgtcactaaattttgcgaccaaggaatttgtgaggaattttatgttttctgtcacnaattnccct 519  Q
    ||||||||||||||| | ||||| || ||||| |||||||||||||||||||||||||||||||||||||||||| || ||||| ||||| |||| ||||    
T  1745612 ttagtgagggaaaacgtaaaatctctctctaattccgtcactaaattttgcgaccaaggaatttgtgaggaatttcat-ttttccgtcactaatttccct 1745514  T
Q  520 ccctaattttgcnttt 535  Q
    | |||||||||| |||    
T  1745513 cgctaattttgctttt 1745498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 420 - 535
Target Start/End: Complemental strand, 3461435 - 3461320
Alignment:
Q  420 ttagtgagggaaaacatgaaatccctttctaantccgtcactaaattttgcgaccaaggaatttgtgaggaattttatgttttctgtcacnaattnccct 519  Q
    ||||||||||||||| | |||||||| ||||| ||||||| |||||||||||| |||| ||||||||||||||||||| ||||||||||| |||| || |    
T  3461435 ttagtgagggaaaacgtaaaatccctctctaattccgtcattaaattttgcgatcaagaaatttgtgaggaattttattttttctgtcactaatttcctt 3461336  T
Q  520 ccctaattttgcnttt 535  Q
    | |||||||||| |||    
T  3461335 cgctaattttgctttt 3461320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 406 - 530
Target Start/End: Original strand, 11219134 - 11219258
Alignment:
Q  406 ttagtgagggaaatttagtgagggaaaacatgaaatccctttctaantccgtcactaaattttgcgaccaaggaatttgtgaggaattttatgttttctg 505  Q
    ||||||||| |||||| |||||||||||| |||||||||| ||||| ||||||| ||||||||||||| | |||||||||||| ||||| || ||||| |    
T  11219134 ttagtgaggaaaattttgtgagggaaaacgtgaaatccctctctaattccgtcattaaattttgcgactatggaatttgtgagaaatttcattttttccg 11219233  T
Q  506 tcacnaattnccctccctaattttg 530  Q
    |||| |||| ||||| |||||||||    
T  11219234 tcactaatttccctcgctaattttg 11219258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 410 - 530
Target Start/End: Complemental strand, 11837349 - 11837229
Alignment:
Q  410 tgagggaaatttagtgagggaaaacatgaaatccctttctaantccgtcactaaattttgcgaccaaggaatttgtgaggaattttatgttttctgtcac 509  Q
    ||||||| | |||||||||||||||||||||| ||| ||||| |||||||||||||||| ||||||| ||||||||||||||||| || |||||  ||||    
T  11837349 tgagggatacttagtgagggaaaacatgaaattcctctctaattccgtcactaaattttacgaccaaagaatttgtgaggaatttcattttttccatcac 11837250  T
Q  510 naattnccctccctaattttg 530  Q
     |||| ||||| |||||||||    
T  11837249 gaatttccctcgctaattttg 11837229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 420 - 535
Target Start/End: Complemental strand, 13905163 - 13905048
Alignment:
Q  420 ttagtgagggaaaacatgaaatccctttctaantccgtcactaaattttgcgaccaaggaatttgtgaggaattttatgttttctgtcacnaattnccct 519  Q
    ||||||||||||||| | |||||||| ||||| ||||||||||||||||||||||||| |||||||||||||||| || ||||| ||||| |||| | ||    
T  13905163 ttagtgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaagaaatttgtgaggaatttcattttttccgtcactaatttcgct 13905064  T
Q  520 ccctaattttgcnttt 535  Q
    | |||||||||| |||    
T  13905063 ctctaattttgctttt 13905048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 416 - 535
Target Start/End: Original strand, 29236050 - 29236169
Alignment:
Q  416 aaatttagtgagggaaaacatgaaatccctttctaantccgtcactaaattttgcgaccaaggaatttgtgaggaattttatgttttctgtcacnaattn 515  Q
    ||||||||||||||||||| | |||||||| ||||| ||||||||||||||||||||||||| | |||||||| ||||| || ||||| ||||| ||||     
T  29236050 aaatttagtgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaagaattttgtgagaaatttcattttttccgtcactaattt 29236149  T
Q  516 ccctccctaattttgcnttt 535  Q
    ||||| |||||||||| |||    
T  29236150 ccctcgctaattttgctttt 29236169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 400 - 535
Target Start/End: Complemental strand, 29704177 - 29704042
Alignment:
Q  400 caaaagttagtgagggaaatttagtgagggaaaacatgaaatccctttctaantccgtcactaaattttgcgaccaaggaatttgtgaggaattttatgt 499  Q
    ||||| |||||||||||||||| ||||| |||||| |||||||||| | ||| |||||||||||||||||||| ||   |||||||||||||||| || |    
T  29704177 caaaaattagtgagggaaattttgtgagagaaaacgtgaaatccctctttaattccgtcactaaattttgcgatcataaaatttgtgaggaatttcattt 29704078  T
Q  500 tttctgtcacnaattnccctccctaattttgcnttt 535  Q
    |||| ||||| |||| ||||| |||||||||| |||    
T  29704077 tttccgtcactaatttccctcgctaattttgctttt 29704042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 420 - 530
Target Start/End: Original strand, 23773487 - 23773597
Alignment:
Q  420 ttagtgagggaaaacatgaaatccctttctaantccgtcactaaattttgcgaccaaggaatttgtgaggaattttatgttttctgtcacnaattnccct 519  Q
    ||||||||||||||| | |||||||| ||||| |||||||||||||||||||||||||||||||||||||||||| || | ||| ||||| |||| ||||    
T  23773487 ttagtgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaaggaatttgtgaggaatttcatttcttccgtcactaatttccct 23773586  T
Q  520 ccctaattttg 530  Q
      |||||||||    
T  23773587 tactaattttg 23773597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 400 - 529
Target Start/End: Complemental strand, 23217353 - 23217224
Alignment:
Q  400 caaaagttagtgagggaaatttagtgagggaaaacatgaaatccctttctaantccgtcactaaattttgcgaccaaggaatttgtgaggaattttatgt 499  Q
    ||||| || |||||| |||||||| |||||||||| |||||||||| ||||| ||||||||||||||||| |||||  ||||||||||||||||| || |    
T  23217353 caaaaattggtgaggaaaatttagagagggaaaacgtgaaatccctctctaattccgtcactaaattttgggaccatagaatttgtgaggaatttgattt 23217254  T
Q  500 tttctgtcacnaattnccctccctaatttt 529  Q
    ||||  |||  |||| ||||||||||||||    
T  23217253 tttccctcattaatttccctccctaatttt 23217224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 400 - 514
Target Start/End: Complemental strand, 27212926 - 27212812
Alignment:
Q  400 caaaagttagtgagggaaatttagtgagggaaaacatgaaatccctttctaantccgtcactaaattttgcgaccaaggaatttgtgaggaattttatgt 499  Q
    ||||| |||||||||||||||||| |||| ||||| |||||||||| | ||| ||||||||||||||||||||| || |||||||||||| ||||||| |    
T  27212926 caaaaattagtgagggaaatttagagaggaaaaacgtgaaatccctctttaattccgtcactaaattttgcgactaaagaatttgtgagggattttattt 27212827  T
Q  500 tttctgtcacnaatt 514  Q
    ||||| |||| ||||    
T  27212826 tttctatcactaatt 27212812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 416 - 529
Target Start/End: Original strand, 28859597 - 28859710
Alignment:
Q  416 aaatttagtgagggaaaacatgaaatccctttctaantccgtcactaaattttgcgaccaaggaatttgtgaggaattttatgttttctgtcacnaattn 515  Q
    ||||||||||||| ||||| | |||||||| ||||| |||||||||||||||||| ||||||||||||||||||||||| || ||||| ||||| ||||     
T  28859597 aaatttagtgaggtaaaacgtaaaatccctctctaattccgtcactaaattttgcaaccaaggaatttgtgaggaatttcattttttccgtcactaattt 28859696  T
Q  516 ccctccctaatttt 529  Q
     |||| ||||||||    
T  28859697 tcctcgctaatttt 28859710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 400 - 529
Target Start/End: Complemental strand, 36564584 - 36564455
Alignment:
Q  400 caaaagttagtgagggaaatttagtgagggaaaacatgaaatccctttctaantccgtcactaaattttgcgaccaaggaatttgtgaggaattttatgt 499  Q
    ||||| |||||||||||||||| |||||||||| |||||||||||| ||||| | |||||||||||| ||||||||| |||| ||| ||| ||||||| |    
T  36564584 caaaaattagtgagggaaattttgtgagggaaagcatgaaatccctctctaatttcgtcactaaattctgcgaccaaagaatctgtcagggattttattt 36564485  T
Q  500 tttctgtcacnaattnccctccctaatttt 529  Q
    ||||  |||| ||||  |||||||||||||    
T  36564484 tttccatcactaattttcctccctaatttt 36564455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 420 - 535
Target Start/End: Original strand, 5565732 - 5565847
Alignment:
Q  420 ttagtgagggaaaacatgaaatccctttctaantccgtcactaaattttgcgaccaaggaatttgtgaggaattttatgttttctgtcacnaattnccct 519  Q
    ||||||||||||||| |||||||||| ||||| |  |||||||||||||||||||||| ||||||||||  ||||||| ||||| ||||| |||| ||||    
T  5565732 ttagtgagggaaaacgtgaaatccctctctaattatgtcactaaattttgcgaccaagaaatttgtgagagattttattttttccgtcactaatttccct 5565831  T
Q  520 ccctaattttgcnttt 535  Q
    |||| ||||||| |||    
T  5565832 ccctgattttgctttt 5565847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 400 - 535
Target Start/End: Original strand, 27968905 - 27969040
Alignment:
Q  400 caaaagttagtgagggaaatttagtgagggaaaacatgaaatccctttctaantccgtcactaaattttgcgaccaaggaatttgtgaggaattttatgt 499  Q
    ||||| ||||||| |||||||||||||||||||||||||||||||| ||||| || |||| ||||||||||||||||  ||  ||||||  ||||||| |    
T  27968905 caaaaattagtgacggaaatttagtgagggaaaacatgaaatccctctctaattctgtcattaaattttgcgaccaacaaaggtgtgagagattttattt 27969004  T
Q  500 tttctgtcacnaattnccctccctaattttgcnttt 535  Q
     ||| ||||| |||| |||||||| ||||||| |||    
T  27969005 gttccgtcactaatttccctccctgattttgctttt 27969040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 420 - 535
Target Start/End: Complemental strand, 43329888 - 43329773
Alignment:
Q  420 ttagtgagggaaaacatgaaatccctttctaantccgtcactaaattttgcgaccaaggaatttgtgaggaattttatgttttctgtcacnaattnccct 519  Q
    ||||||||||||||  | |||||| | ||||| |||||||||||||||| ||||||||||||||||||||||||| || ||||| ||||| |||| ||||    
T  43329888 ttagtgagggaaaatgtaaaatccttctctaattccgtcactaaattttacgaccaaggaatttgtgaggaatttcattttttccgtcactaatttccct 43329789  T
Q  520 ccctaattttgcnttt 535  Q
    | |||||||||| |||    
T  43329788 cgctaattttgctttt 43329773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 420 - 535
Target Start/End: Complemental strand, 46012853 - 46012738
Alignment:
Q  420 ttagtgagggaaaacatgaaatccctttctaantccgtcactaaattttgcgaccaaggaatttgtgaggaattttatgttttctgtcacnaattnccct 519  Q
    |||||||||||||||||||||||||| ||||| |  ||||||||||||||||| |||||||||||||||  ||||||| ||||| ||||| ||||  |||    
T  46012853 ttagtgagggaaaacatgaaatccctctctaattttgtcactaaattttgcgatcaaggaatttgtgagagattttattttttccgtcactaattttcct 46012754  T
Q  520 ccctaattttgcnttt 535  Q
    |||| ||||||| |||    
T  46012753 ccctgattttgctttt 46012738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 416 - 535
Target Start/End: Complemental strand, 47263394 - 47263275
Alignment:
Q  416 aaatttagtgagggaaaacatgaaatccctttctaantccgtcactaaattttgcgaccaaggaatttgtgaggaattttatgttttctgtcacnaattn 515  Q
    ||||||||||||||||||| | ||||  || ||||| || ||||||||||||||||||||||||||||||||||||||| || ||||||||||| ||||     
T  47263394 aaatttagtgagggaaaacgtaaaatttctatctaactctgtcactaaattttgcgaccaaggaatttgtgaggaatttaattttttctgtcaccaattt 47263295  T
Q  516 ccctccctaattttgcnttt 535  Q
    || ||  ||||||||| |||    
T  47263294 ccttcgttaattttgctttt 47263275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 408 - 530
Target Start/End: Complemental strand, 27182793 - 27182673
Alignment:
Q  408 agtgagggaaatttagtgagggaaaacatgaaatccctttctaantccgtcactaaattttgcgaccaaggaatttgtgaggaattttatgttttctgtc 507  Q
    |||||| ||||||||||||||||||||| |||||| || ||||| | ||||||||||| ||| |||||||| |||||||||| ||||||  |||| ||||    
T  27182793 agtgagagaaatttagtgagggaaaacaagaaatctctctctaatttcgtcactaaatcttgtgaccaagggatttgtgagggatttta--ttttttgtc 27182696  T
Q  508 acnaattnccctccctaattttg 530  Q
    || |||| |||||||||||||||    
T  27182695 actaatttccctccctaattttg 27182673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 423 - 514
Target Start/End: Original strand, 6718723 - 6718814
Alignment:
Q  423 gtgagggaaaacatgaaatccctttctaantccgtcactaaattttgcgaccaaggaatttgtgaggaattttatgttttctgtcacnaatt 514  Q
    |||||||||||| |||||||||||||||| ||||||||||||||||||||||| | |||||||||||||||| || ||||| ||||| ||||    
T  6718723 gtgagggaaaacgtgaaatccctttctaattccgtcactaaattttgcgaccatgaaatttgtgaggaatttcattttttccgtcactaatt 6718814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 401 - 530
Target Start/End: Original strand, 8543460 - 8543588
Alignment:
Q  401 aaaagttagtgagggaaatttagtgagggaaaacatgaaatccctttctaantccgtcactaaattttgcgaccaaggaatttgtgaggaattttatgtt 500  Q
    |||| |||||||||||||||| |||||||||||| |||||||||| ||||| ||||||| ||||||||||||||| | || |||| |||||||| || ||    
T  8543460 aaaaattagtgagggaaattttgtgagggaaaacgtgaaatccctctctaattccgtcattaaattttgcgaccatgaaacttgttaggaatttcat-tt 8543558  T
Q  501 ttctgtcacnaattnccctccctaattttg 530  Q
    |||  |||| |||| ||||| |||||||||    
T  8543559 ttccatcactaatttccctcgctaattttg 8543588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #68
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 400 - 503
Target Start/End: Complemental strand, 11085487 - 11085384
Alignment:
Q  400 caaaagttagtgagggaaatttagtgagggaaaacatgaaatccctttctaantccgtcactaaattttgcgaccaaggaatttgtgaggaattttatgt 499  Q
    ||||| |||||||| ||||||||||||||||||   |||||||||| ||||| |||||||||||||||||||||||| |||||| |||||||||| || |    
T  11085487 caaaaattagtgagagaaatttagtgagggaaattgtgaaatccctctctaattccgtcactaaattttgcgaccaaagaatttatgaggaatttcattt 11085388  T
Q  500 tttc 503  Q
    ||||    
T  11085387 tttc 11085384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #69
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 406 - 528
Target Start/End: Original strand, 10803716 - 10803839
Alignment:
Q  406 ttagtgagggaaatttagtgagggaaaacatgaaatccctttctaantccgtcactaaattttgcgaccaaggaatttgtgaggaatttta-tgttttct 504  Q
    |||| |||||||||||||||||||||||| | |||| ||| | ||| ||||||| ||||||||||||||||| |||||||||||||||| | | |||||     
T  10803716 ttagcgagggaaatttagtgagggaaaacgtaaaattcctctttaattccgtcattaaattttgcgaccaagaaatttgtgaggaatttcatttttttcc 10803815  T
Q  505 gtcacnaattnccctccctaattt 528  Q
    ||||  |||| |||||||||||||    
T  10803816 gtcattaatttccctccctaattt 10803839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #70
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 430 - 535
Target Start/End: Original strand, 8546265 - 8546370
Alignment:
Q  430 aaaacatgaaatccctttctaantccgtcactaaattttgcgaccaaggaatttgtgaggaattttatgttttctgtcacnaattnccctccctaatttt 529  Q
    ||||| |||||||||| ||||| |||||||||||||||||||| || |||||||||||||||||| || ||||| ||||| ||||  |||| ||||||||    
T  8546265 aaaacgtgaaatccctctctaattccgtcactaaattttgcgatcatggaatttgtgaggaatttcattttttccgtcactaattttcctcgctaatttt 8546364  T
Q  530 gcnttt 535  Q
    || |||    
T  8546365 gctttt 8546370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #71
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 420 - 503
Target Start/End: Complemental strand, 17269729 - 17269646
Alignment:
Q  420 ttagtgagggaaaacatgaaatccctttctaantccgtcactaaattttgcgaccaaggaatttgtgaggaattttatgttttc 503  Q
    ||||||||| |||| ||||||||||| ||||| |||||||||||||||||||| ||| |||||||||||||||||||| |||||    
T  17269729 ttagtgaggaaaaatatgaaatccctctctaattccgtcactaaattttgcgatcaaagaatttgtgaggaattttattttttc 17269646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #72
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 400 - 529
Target Start/End: Original strand, 18380014 - 18380143
Alignment:
Q  400 caaaagttagtgagggaaatttagtgagggaaaacatgaaatccctttctaantccgtcactaaattttgcgaccaaggaatttgtgaggaattttatgt 499  Q
    ||||| ||||||||||||||||| ||||||||||  | |||||||| | ||| |||||||||||||||| ||| |||| ||||||||| |||||| || |    
T  18380014 caaaaattagtgagggaaatttaatgagggaaaatgtaaaatccctctttaattccgtcactaaattttacgatcaagaaatttgtgaagaatttcattt 18380113  T
Q  500 tttctgtcacnaattnccctccctaatttt 529  Q
    |||| |||||  ||| ||||| ||||||||    
T  18380114 tttccgtcactgatttccctcgctaatttt 18380143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #73
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 420 - 530
Target Start/End: Complemental strand, 21490159 - 21490049
Alignment:
Q  420 ttagtgagggaaaacatgaaatccctttctaantccgtcactaaattttgcgaccaaggaatttgtgaggaattttatgttttctgtcacnaattnccct 519  Q
    ||||||||||||||  | |||||||| ||||| || ||||||||||||||||||||||||||||||||| ||||| || ||||| ||||   ||| ||||    
T  21490159 ttagtgagggaaaatgtaaaatccctctctaattctgtcactaaattttgcgaccaaggaatttgtgagaaatttcattttttccgtcattgatttccct 21490060  T
Q  520 ccctaattttg 530  Q
    | |||||||||    
T  21490059 cactaattttg 21490049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #74
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 408 - 502
Target Start/End: Original strand, 20088398 - 20088492
Alignment:
Q  408 agtgagggaaatttagtgagggaaaacatgaaatccctttctaantccgtcactaaattttgcgaccaaggaatttgtgaggaattttatgtttt 502  Q
    |||||| |||||||||||||| |||||||||||||| | ||||| ||| ||||||||||||| |||||| |||||| |||| |||||||| ||||    
T  20088398 agtgagagaaatttagtgaggcaaaacatgaaatccttctctaattccatcactaaattttgtgaccaaagaatttatgagaaattttatttttt 20088492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #75
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 401 - 535
Target Start/End: Original strand, 15490026 - 15490159
Alignment:
Q  401 aaaagttagtgagggaaatttagtgagggaaaacatgaaatccctttctaantccgtcactaaattttgcgaccaaggaatttgtgaggaattttatgtt 500  Q
    |||| |||||||||||||||||||||| |||||| |||||||||| | ||| |  |||||||||||||||||||||  ||||||||||  ||||||| ||    
T  15490026 aaaaattagtgagggaaatttagtgagagaaaacgtgaaatccctctttaatt-tgtcactaaattttgcgaccaaaaaatttgtgagagattttatttt 15490124  T
Q  501 ttctgtcacnaattnccctccctaattttgcnttt 535  Q
    ||  ||||| ||||   |||||| ||||||| |||    
T  15490125 tttcgtcactaatttttctccctgattttgctttt 15490159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #76
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 456 - 535
Target Start/End: Complemental strand, 20762039 - 20761960
Alignment:
Q  456 gtcactaaattttgcgaccaaggaatttgtgaggaattttatgttttctgtcacnaattnccctccctaattttgcnttt 535  Q
    |||||||||||||||||||||||||||||||||  ||||||| ||||| ||||| |||| |||||||| ||||||| |||    
T  20762039 gtcactaaattttgcgaccaaggaatttgtgagagattttattttttccgtcactaatttccctccctgattttgctttt 20761960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #77
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 400 - 530
Target Start/End: Original strand, 29451084 - 29451214
Alignment:
Q  400 caaaagttagtgagggaaatttagtgagggaaaacatgaaatccctttctaantccgtcactaaattttgcgaccaaggaatttgtgaggaattttatgt 499  Q
    ||||| |||| ||| |||||||||||||||||||| | |||||||| ||||| |||||| | ||||||||| ||  |||||||| |||| ||||| || |    
T  29451084 caaaaattagcgagagaaatttagtgagggaaaacgtaaaatccctctctaattccgtcccaaaattttgcaactgaggaatttatgagaaatttcattt 29451183  T
Q  500 tttctgtcacnaattnccctccctaattttg 530  Q
    |||| ||||| |||| |||||  ||||||||    
T  29451184 tttccgtcactaatttccctcgttaattttg 29451214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #78
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 400 - 529
Target Start/End: Complemental strand, 20615488 - 20615359
Alignment:
Q  400 caaaagttagtgagggaaatttagtgagggaaaacatgaaatccctttctaantccgtcactaaattttgcgaccaaggaatttgtgaggaattttatgt 499  Q
    ||||| |||||||||||||||||| || ||||||| |||||| ||| ||||| || |||| |||||||| |||||||  ||||||||||  ||||||| |    
T  20615488 caaaaattagtgagggaaatttagagaaggaaaacgtgaaattcctctctaattctgtcattaaattttacgaccaaaaaatttgtgagatattttattt 20615389  T
Q  500 tttctgtcacnaattnccctccctaatttt 529  Q
    |||| ||| | ||||  ||||| |||||||    
T  20615388 tttccgtctctaattttcctccttaatttt 20615359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #79
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 420 - 535
Target Start/End: Complemental strand, 6088353 - 6088238
Alignment:
Q  420 ttagtgagggaaaacatgaaatccctttctaantccgtcactaaattttgcgaccaaggaatttgtgaggaattttatgttttctgtcacnaattnccct 519  Q
    ||||||||||||||| | |||||| | ||||| ||||| | ||||||||| ||||||||||||| |||||||||| || ||||| ||||| |||| ||||    
T  6088353 ttagtgagggaaaacgtaaaatccatctctaattccgttattaaattttgtgaccaaggaatttctgaggaatttcattttttccgtcactaatttccct 6088254  T
Q  520 ccctaattttgcnttt 535  Q
      || ||||||| |||    
T  6088253 tacttattttgctttt 6088238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #80
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 400 - 537
Target Start/End: Complemental strand, 6447391 - 6447254
Alignment:
Q  400 caaaagttagtgagggaaatttagtgagggaaaacatgaaatccctttctaantccgtcactaaattttgcgaccaaggaatttgtgaggaattttatgt 499  Q
    ||||| |||| ||| |||||||| ||||  |||| |  |||||  ||||||| || ||||||||| |||| |||||| |||| || |||||||||||| |    
T  6447391 caaaaattagcgagagaaatttaatgagttaaaatagtaaatctttttctaattctgtcactaaactttgagaccaaagaatctgcgaggaattttattt 6447292  T
Q  500 tttctgtcacnaattnccctccctaattttgcntttcc 537  Q
    ||||  |||| |||| |||||||||||||||| |||||    
T  6447291 tttccatcactaatttccctccctaattttgcttttcc 6447254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #81
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 416 - 529
Target Start/End: Complemental strand, 10772183 - 10772069
Alignment:
Q  416 aaatttagtgagggaaaacatgaaatccctttctaantccgtcactaaattttgcgaccaaggaatttgtgaggaatttta-tgttttctgtcacnaatt 514  Q
    |||||||||||||||||| ||||||||||| ||||| | ||||| ||||||||||||| ||  ||||||||| |||||  | | ||||||||||| ||||    
T  10772183 aaatttagtgagggaaaatatgaaatccctctctaatttcgtcattaaattttgcgactaaaaaatttgtgaagaattccatttttttctgtcactaatt 10772084  T
Q  515 nccctccctaatttt 529  Q
     |||||  |||||||    
T  10772083 tccctcgttaatttt 10772069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #82
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 420 - 514
Target Start/End: Original strand, 50240756 - 50240850
Alignment:
Q  420 ttagtgagggaaaacatgaaatccctttctaantccgtcactaaattttgcgaccaaggaatttgtgaggaattttatgttttctgtcacnaatt 514  Q
    ||||||||||| ||||||||||| || ||||| |  || ||||||||||||| ||||||||||| ||||  ||||||| ||||| ||||| ||||    
T  50240756 ttagtgagggataacatgaaatctctctctaattatgttactaaattttgcgtccaaggaatttatgagagattttattttttccgtcactaatt 50240850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #83
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 420 - 494
Target Start/End: Complemental strand, 23233288 - 23233214
Alignment:
Q  420 ttagtgagggaaaacatgaaatccctttctaantccgtcactaaattttgcgaccaaggaatttgtgaggaattt 494  Q
    ||||||||||||||| |||||| ||| || || ||| |||||||||||||||||||| | ||||||||| |||||    
T  23233288 ttagtgagggaaaacgtgaaattcctctcaaattccttcactaaattttgcgaccaaagtatttgtgagaaattt 23233214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #84
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 410 - 530
Target Start/End: Complemental strand, 26963384 - 26963264
Alignment:
Q  410 tgagggaaatttagtgagggaaaacatgaaatccctttctaantccgtcactaaattttgcgaccaaggaatttgtgaggaattttatgttttctgtcac 509  Q
    ||||||||||||||||||||||||  | |||| ||| ||||| ||||| |||||||||| | ||||| | |||||| |  ||||| || ||||  |||||    
T  26963384 tgagggaaatttagtgagggaaaatgtaaaattcctctctaattccgttactaaattttacaaccaaagtatttgtaaaaaatttcattttttacgtcac 26963285  T
Q  510 naattnccctccctaattttg 530  Q
     |||| |||||  ||||||||    
T  26963284 taatttccctcgttaattttg 26963264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #85
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 416 - 465
Target Start/End: Complemental strand, 35579654 - 35579605
Alignment:
Q  416 aaatttagtgagggaaaacatgaaatccctttctaantccgtcactaaat 465  Q
    ||||||||||||||||||| | |||||||| ||||| |||||||||||||    
T  35579654 aaatttagtgagggaaaacgtaaaatccctctctaattccgtcactaaat 35579605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #86
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 428 - 476
Target Start/End: Complemental strand, 27711285 - 27711237
Alignment:
Q  428 ggaaaacatgaaatccctttctaantccgtcactaaattttgcgaccaa 476  Q
    ||||||||||||||  || ||||| ||||||||||||||||||||||||    
T  27711285 ggaaaacatgaaatttctctctaattccgtcactaaattttgcgaccaa 27711237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #87
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 416 - 531
Target Start/End: Original strand, 45304340 - 45304455
Alignment:
Q  416 aaatttagtgagggaaaacatgaaatccctttctaantccgtcactaaattttgcgaccaaggaatttgtgaggaattttatgttttctgtcacnaattn 515  Q
    ||||||||||||| |||| |||||||  ||||  || ||||||| |||||||||  || || ||| |||| ||||||||||| ||||| ||||  ||||     
T  45304340 aaatttagtgaggaaaaatatgaaatttcttttaaattccgtcattaaattttgtaactaaagaaattgttaggaattttattttttccgtcattaattt 45304439  T
Q  516 ccctccctaattttgc 531  Q
    | |||| | |||||||    
T  45304440 ctctccttgattttgc 45304455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 110; Significance: 3e-55; HSPs: 74)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 110; E-Value: 3e-55
Query Start/End: Original strand, 400 - 537
Target Start/End: Original strand, 22083832 - 22083969
Alignment:
Q  400 caaaagttagtgagggaaatttagtgagggaaaacatgaaatccctttctaantccgtcactaaattttgcgaccaaggaatttgtgaggaattttatgt 499  Q
    ||||| |||||||||||||||||||||||||||||||||||||||| ||||| |||||||| ||||||||||||||||||||||||||||||||||||||    
T  22083832 caaaaattagtgagggaaatttagtgagggaaaacatgaaatccctctctaattccgtcacaaaattttgcgaccaaggaatttgtgaggaattttatgt 22083931  T
Q  500 tttctgtcacnaattnccctccctaattttgcntttcc 537  Q
    |||| ||||| |||| |||||||||||||||| |||||    
T  22083932 tttccgtcacaaatttccctccctaattttgcttttcc 22083969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 400 - 537
Target Start/End: Original strand, 12951702 - 12951839
Alignment:
Q  400 caaaagttagtgagggaaatttagtgagggaaaacatgaaatccctttctaantccgtcactaaattttgcgaccaaggaatttgtgaggaattttatgt 499  Q
    ||||| |||||||||||||||||||||||||||||||||||||||| ||||| ||||||| |||||||||||||||||||||||||||| ||||||||||    
T  12951702 caaaaattagtgagggaaatttagtgagggaaaacatgaaatccctctctaattccgtcattaaattttgcgaccaaggaatttgtgagaaattttatgt 12951801  T
Q  500 tttctgtcacnaattnccctccctaattttgcntttcc 537  Q
    |||| ||||| |||| ||||| |||||||||| |||||    
T  12951802 tttccgtcacaaatttccctctctaattttgcttttcc 12951839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 98; E-Value: 5e-48
Query Start/End: Original strand, 400 - 537
Target Start/End: Complemental strand, 18033670 - 18033534
Alignment:
Q  400 caaaagttagtgagggaaatttagtgagggaaaacatgaaatccctttctaantccgtcactaaattttgcgaccaaggaatttgtgaggaattttatgt 499  Q
    ||||| ||||||||||||||||| |||||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||| |||     
T  18033670 caaaaattagtgagggaaatttaatgagggaaaacatgaaatccctctctaattccgtcactaaattttgcgaccaaggaatttgtgaggaatttaatg- 18033572  T
Q  500 tttctgtcacnaattnccctccctaattttgcntttcc 537  Q
    |||| ||||| |||| |||||||||||||||| |||||    
T  18033571 tttccgtcacaaatttccctccctaattttgcttttcc 18033534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 96; E-Value: 8e-47
Query Start/End: Original strand, 400 - 535
Target Start/End: Original strand, 9892957 - 9893092
Alignment:
Q  400 caaaagttagtgagggaaatttagtgagggaaaacatgaaatccctttctaantccgtcactaaattttgcgaccaaggaatttgtgaggaattttatgt 499  Q
    ||||| ||||||||||||||||||||||||||||| |||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||| || |    
T  9892957 caaaaattagtgagggaaatttagtgagggaaaacgtgaaatccctctctaattccgtcactaaattttgcgaccaaggaatttgtgaggaatttcattt 9893056  T
Q  500 tttctgtcacnaattnccctccctaattttgcnttt 535  Q
    |||| ||||| |||| ||||| |||||||||| |||    
T  9893057 tttccgtcactaatttccctcgctaattttgctttt 9893092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 400 - 537
Target Start/End: Original strand, 2992609 - 2992746
Alignment:
Q  400 caaaagttagtgagggaaatttagtgagggaaaacatgaaatccctttctaantccgtcactaaattttgcgaccaaggaatttgtgaggaattttatgt 499  Q
    ||||| ||||||||||| |||||||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||| |    
T  2992609 caaaaattagtgagggatatttagtgagggaaaacatgaaatccctctctaattccgtcactaaattttgcgaccaaggaatttgtgaggaattttattt 2992708  T
Q  500 tttctgtcacnaattnccctccctaattttgcntttcc 537  Q
    ||||  |||| |||| ||||| |||||| ||| |||||    
T  2992709 tttccatcactaatttccctcgctaattatgcttttcc 2992746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 420 - 529
Target Start/End: Original strand, 11077663 - 11077772
Alignment:
Q  420 ttagtgagggaaaacatgaaatccctttctaantccgtcactaaattttgcgaccaaggaatttgtgaggaattttatgttttctgtcacnaattnccct 519  Q
    |||||||||||||||||||||||||| |||||  |||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||| ||||    
T  11077663 ttagtgagggaaaacatgaaatccctctctaataccgtcactaaattttgcgaccaaggaatttgtgaggaattttatgttttccgtcacaaatttccct 11077762  T
Q  520 ccctaatttt 529  Q
    ||||||||||    
T  11077763 ccctaatttt 11077772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 88; E-Value: 5e-42
Query Start/End: Original strand, 400 - 535
Target Start/End: Original strand, 6598458 - 6598593
Alignment:
Q  400 caaaagttagtgagggaaatttagtgagggaaaacatgaaatccctttctaantccgtcactaaattttgcgaccaaggaatttgtgaggaattttatgt 499  Q
    ||||| ||||||||||| ||||||||||||||||| |||||||||| ||||| ||||||||||||||||||||||||| |||||||||||||||| || |    
T  6598458 caaaaattagtgagggatatttagtgagggaaaacttgaaatccctctctaattccgtcactaaattttgcgaccaagtaatttgtgaggaatttcattt 6598557  T
Q  500 tttctgtcacnaattnccctccctaattttgcnttt 535  Q
    |||| ||||| |||| ||||| |||||||||| |||    
T  6598558 tttccgtcactaatttccctcgctaattttgctttt 6598593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 88; E-Value: 5e-42
Query Start/End: Original strand, 400 - 535
Target Start/End: Complemental strand, 15364603 - 15364468
Alignment:
Q  400 caaaagttagtgagggaaatttagtgagggaaaacatgaaatccctttctaantccgtcactaaattttgcgaccaaggaatttgtgaggaattttatgt 499  Q
    ||||| ||||||||||||||||||||||||||||| | |||||| | ||||| |||||||||||||||||||||||||||||||||||||||||| || |    
T  15364603 caaaaattagtgagggaaatttagtgagggaaaacgtaaaatccttctctaattccgtcactaaattttgcgaccaaggaatttgtgaggaatttcattt 15364504  T
Q  500 tttctgtcacnaattnccctccctaattttgcnttt 535  Q
    |||| ||||| |||| ||||| |||||||||| |||    
T  15364503 tttccgtcactaatttccctcactaattttgctttt 15364468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 88; E-Value: 5e-42
Query Start/End: Original strand, 400 - 535
Target Start/End: Complemental strand, 24661154 - 24661019
Alignment:
Q  400 caaaagttagtgagggaaatttagtgagggaaaacatgaaatccctttctaantccgtcactaaattttgcgaccaaggaatttgtgaggaattttatgt 499  Q
    ||||| ||||||||||| ||||||||||||||||||||||||| || ||||| ||||||| |||||||||||||||||||||||||||||||||| || |    
T  24661154 caaaaattagtgagggatatttagtgagggaaaacatgaaatctctctctaattccgtcattaaattttgcgaccaaggaatttgtgaggaatttcattt 24661055  T
Q  500 tttctgtcacnaattnccctccctaattttgcnttt 535  Q
    |||| ||||| |||| ||||| |||||||||| |||    
T  24661054 tttccgtcactaatttccctcgctaattttgctttt 24661019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 88; E-Value: 5e-42
Query Start/End: Original strand, 401 - 529
Target Start/End: Original strand, 25397997 - 25398125
Alignment:
Q  401 aaaagttagtgagggaaatttagtgagggaaaacatgaaatccctttctaantccgtcactaaattttgcgaccaaggaatttgtgaggaattttatgtt 500  Q
    |||| ||||||||||||||||||||||||||||| | |||||||| ||||| |||||||||||||||||||||||||||||||||||||||||| || ||    
T  25397997 aaaaattagtgagggaaatttagtgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaaggaatttgtgaggaatttcatttt 25398096  T
Q  501 ttctgtcacnaattnccctccctaatttt 529  Q
    ||| ||||| |||| ||||| ||||||||    
T  25398097 ttccgtcactaatttccctcgctaatttt 25398125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 88; E-Value: 5e-42
Query Start/End: Original strand, 400 - 535
Target Start/End: Original strand, 28364905 - 28365040
Alignment:
Q  400 caaaagttagtgagggaaatttagtgagggaaaacatgaaatccctttctaantccgtcactaaattttgcgaccaaggaatttgtgaggaattttatgt 499  Q
    ||||| ||||||||||||||||||||||||||||| | |||||||| ||||| |||||||||||||||||||||||| ||||||||||||||||| || |    
T  28364905 caaaaattagtgagggaaatttagtgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgaggaatttcattt 28365004  T
Q  500 tttctgtcacnaattnccctccctaattttgcnttt 535  Q
    |||| ||||| |||| ||||| |||||||||| |||    
T  28365005 tttccgtcactaatttccctcgctaattttgctttt 28365040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 400 - 535
Target Start/End: Original strand, 12200688 - 12200823
Alignment:
Q  400 caaaagttagtgagggaaatttagtgagggaaaacatgaaatccctttctaantccgtcactaaattttgcgaccaaggaatttgtgaggaattttatgt 499  Q
    ||||| ||||||||||| |||||||||||||||| ||||||||||| ||||| ||| |||||||||||| ||||||||||||||||||||||||| || |    
T  12200688 caaaaattagtgagggatatttagtgagggaaaatatgaaatccctctctaattccctcactaaattttacgaccaaggaatttgtgaggaatttcattt 12200787  T
Q  500 tttctgtcacnaattnccctccctaattttgcnttt 535  Q
    |||| ||||| |||| ||||| |||||||||| |||    
T  12200788 tttccgtcactaatttccctcactaattttgctttt 12200823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 400 - 535
Target Start/End: Original strand, 14886555 - 14886690
Alignment:
Q  400 caaaagttagtgagggaaatttagtgagggaaaacatgaaatccctttctaantccgtcactaaattttgcgaccaaggaatttgtgaggaattttatgt 499  Q
    ||||| ||||||||| ||||||||||||||||||||| |||||||| ||||| |||||||||||||||| ||||||| |||| ||||||| ||||||| |    
T  14886555 caaaaattagtgaggaaaatttagtgagggaaaacatcaaatccctctctaattccgtcactaaattttacgaccaaagaatatgtgagggattttattt 14886654  T
Q  500 tttctgtcacnaattnccctccctaattttgcnttt 535  Q
    |||||||||| ||||  ||||||||||||||| |||    
T  14886655 tttctgtcactaattttcctccctaattttgctttt 14886690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 400 - 535
Target Start/End: Complemental strand, 22579494 - 22579359
Alignment:
Q  400 caaaagttagtgagggaaatttagtgagggaaaacatgaaatccctttctaantccgtcactaaattttgcgaccaaggaatttgtgaggaattttatgt 499  Q
    ||||| |||||||||||||||| |||||||||||| |||||||||| ||||| |||||||||||||||||||||||  ||||||||||||||||| || |    
T  22579494 caaaaattagtgagggaaattttgtgagggaaaacgtgaaatccctctctaattccgtcactaaattttgcgaccatagaatttgtgaggaatttcattt 22579395  T
Q  500 tttctgtcacnaattnccctccctaattttgcnttt 535  Q
    |||| ||||| |||| ||||| |||||||||| |||    
T  22579394 tttccgtcactaatttccctcgctaattttgctttt 22579359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 400 - 535
Target Start/End: Original strand, 26224422 - 26224557
Alignment:
Q  400 caaaagttagtgagggaaatttagtgagggaaaacatgaaatccctttctaantccgtcactaaattttgcgaccaaggaatttgtgaggaattttatgt 499  Q
    ||||| |||| |||||| |||||||||||||||||||||||||||| ||||| ||||||||||||||||| ||||||| |||||||||||||||| || |    
T  26224422 caaaaattagcgagggatatttagtgagggaaaacatgaaatccctctctaattccgtcactaaattttgtgaccaagaaatttgtgaggaatttcattt 26224521  T
Q  500 tttctgtcacnaattnccctccctaattttgcnttt 535  Q
    |||| ||||| |||| ||||| |||||||||| |||    
T  26224522 tttccgtcactaatttccctcgctaattttgctttt 26224557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 406 - 535
Target Start/End: Complemental strand, 495766 - 495637
Alignment:
Q  406 ttagtgagggaaatttagtgagggaaaacatgaaatccctttctaantccgtcactaaattttgcgaccaaggaatttgtgaggaattttatgttttctg 505  Q
    ||||||||||||||||||||||||||||| | ||||| || ||||| |||||||||||||||||||||||||||||||||||||||||| || ||||| |    
T  495766 ttagtgagggaaatttagtgagggaaaacgtaaaatcactctctaattccgtcactaaattttgcgaccaaggaatttgtgaggaatttcattttttccg 495667  T
Q  506 tcacnaattnccctccctaattttgcnttt 535  Q
    |||| |||| ||||  |||||||||| |||    
T  495666 tcactaatttcccttgctaattttgctttt 495637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 400 - 530
Target Start/End: Complemental strand, 11049896 - 11049766
Alignment:
Q  400 caaaagttagtgagggaaatttagtgagggaaaacatgaaatccctttctaantccgtcactaaattttgcgaccaaggaatttgtgaggaattttatgt 499  Q
    ||||| |||||||| || ||||||||||||||||||||||||| || ||||| |||||||||||||||||||||||||||||||||||||||||| || |    
T  11049896 caaaaattagtgagagatatttagtgagggaaaacatgaaatctctctctaattccgtcactaaattttgcgaccaaggaatttgtgaggaatttcattt 11049797  T
Q  500 tttctgtcacnaattnccctccctaattttg 530  Q
    |||| ||||| |||| ||||  |||||||||    
T  11049796 tttccgtcactaatttcccttgctaattttg 11049766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 420 - 537
Target Start/End: Original strand, 14872133 - 14872250
Alignment:
Q  420 ttagtgagggaaaacatgaaatccctttctaantccgtcactaaattttgcgaccaaggaatttgtgaggaattttatgttttctgtcacnaattnccct 519  Q
    |||||||||||||||||||||||||| ||||| |||||||||||||||||  |||||||||||||||||||||||||||||||| ||||| |||| ||||    
T  14872133 ttagtgagggaaaacatgaaatccctctctaattccgtcactaaattttggaaccaaggaatttgtgaggaattttatgttttccgtcacaaatttccct 14872232  T
Q  520 ccctaattttgcntttcc 537  Q
    | |||||||| | |||||    
T  14872233 ctctaatttttcttttcc 14872250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 81; E-Value: 7e-38
Query Start/End: Original strand, 401 - 537
Target Start/End: Original strand, 11530220 - 11530356
Alignment:
Q  401 aaaagttagtgagggaaatttagtgagggaaaacatgaaatccctttctaantccgtcactaaattttgcgaccaaggaatttgtgaggaattttatgtt 500  Q
    |||| ||||||||| |||||||||||||||||||||||||||| | ||||| |||||||||||||||| |||  ||| ||||| |||| |||||||||||    
T  11530220 aaaaattagtgaggaaaatttagtgagggaaaacatgaaatccatctctaattccgtcactaaattttacgattaagaaatttatgagaaattttatgtt 11530319  T
Q  501 ttctgtcacnaattnccctccctaattttgcntttcc 537  Q
    ||| ||||| |||| |||||||||||||||| |||||    
T  11530320 ttccgtcacaaatttccctccctaattttgcttttcc 11530356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 81; E-Value: 7e-38
Query Start/End: Original strand, 400 - 529
Target Start/End: Original strand, 26939581 - 26939710
Alignment:
Q  400 caaaagttagtgagggaaatttagtgagggaaaacatgaaatccctttctaantccgtcactaaattttgcgaccaaggaatttgtgaggaattttatgt 499  Q
    ||||| |||||||| || |||||||||||||||||||||||||||| ||||| ||||||||||||||||||||||||| |||||||||||||||| || |    
T  26939581 caaaaattagtgagagatatttagtgagggaaaacatgaaatccctctctaattccgtcactaaattttgcgaccaagaaatttgtgaggaatttcattt 26939680  T
Q  500 tttctgtcacnaattnccctccctaatttt 529  Q
    ||| |||||| |||| |||||  |||||||    
T  26939681 tttttgtcactaatttccctcagtaatttt 26939710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 400 - 537
Target Start/End: Original strand, 6978273 - 6978408
Alignment:
Q  400 caaaagttagtgagggaaatttagtgagggaaaacatgaaatccctttctaantccgtcactaaattttgcgaccaaggaatttgtgaggaattttatgt 499  Q
    ||||| ||||||||||| ||||||||||  |||||||||||| ||| ||||| |||||||||||||||||||||||||||||||||||||||||| || |    
T  6978273 caaaaattagtgagggatatttagtgag--aaaacatgaaattcctctctaattccgtcactaaattttgcgaccaaggaatttgtgaggaatttcattt 6978370  T
Q  500 tttctgtcacnaattnccctccctaattttgcntttcc 537  Q
    |||| || || |||| ||||| |||||||||| |||||    
T  6978371 tttccgtaactaatttccctcgctaattttgcttttcc 6978408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 401 - 527
Target Start/End: Original strand, 12844998 - 12845124
Alignment:
Q  401 aaaagttagtgagggaaatttagtgagggaaaacatgaaatccctttctaantccgtcactaaattttgcgaccaaggaatttgtgaggaattttatgtt 500  Q
    |||| ||||||||| |||||||| |||||||||| ||||||| || ||||| |||||||||||||||||||||||| ||||||||||| |||||||| ||    
T  12844998 aaaaattagtgaggaaaatttagagagggaaaacgtgaaatctctctctaattccgtcactaaattttgcgaccaaagaatttgtgagcaattttatttt 12845097  T
Q  501 ttctgtcacnaattnccctccctaatt 527  Q
    ||| ||||| |||| ||||||||||||    
T  12845098 ttccgtcactaatttccctccctaatt 12845124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 400 - 530
Target Start/End: Complemental strand, 33250853 - 33250723
Alignment:
Q  400 caaaagttagtgagggaaatttagtgagggaaaacatgaaatccctttctaantccgtcactaaattttgcgaccaaggaatttgtgaggaattttatgt 499  Q
    ||||| |||||||| || |||||||||||||||||||||||| ||| ||||| ||| |||||||||||||||||||||||||||||||||||||| || |    
T  33250853 caaaaattagtgagagatatttagtgagggaaaacatgaaattcctctctaattccatcactaaattttgcgaccaaggaatttgtgaggaatttcattt 33250754  T
Q  500 tttctgtcacnaattnccctccctaattttg 530  Q
    |||| ||||| |||| |||||  ||||||||    
T  33250753 tttccgtcactaatttccctcgttaattttg 33250723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 76; E-Value: 7e-35
Query Start/End: Original strand, 400 - 535
Target Start/End: Complemental strand, 1939387 - 1939252
Alignment:
Q  400 caaaagttagtgagggaaatttagtgagggaaaacatgaaatccctttctaantccgtcactaaattttgcgaccaaggaatttgtgaggaattttatgt 499  Q
    ||||| ||||||||||| ||| |||||| ||||||||||||||||| ||||| ||||||| ||||||||||||||||  |||||||||||||||| || |    
T  1939387 caaaaattagtgagggatattcagtgagagaaaacatgaaatccctctctaattccgtcattaaattttgcgaccaaaaaatttgtgaggaatttcattt 1939288  T
Q  500 tttctgtcacnaattnccctccctaattttgcnttt 535  Q
    |||| ||||| |||| ||||| |||||||||| |||    
T  1939287 tttcggtcactaatttccctcgctaattttgctttt 1939252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 76; E-Value: 7e-35
Query Start/End: Original strand, 400 - 535
Target Start/End: Original strand, 21140933 - 21141068
Alignment:
Q  400 caaaagttagtgagggaaatttagtgagggaaaacatgaaatccctttctaantccgtcactaaattttgcgaccaaggaatttgtgaggaattttatgt 499  Q
    ||||| |||||||||||||||| |||||||||||| |||||||||| ||||| ||||||||||||||||||||||| | |||||| ||||||||| || |    
T  21140933 caaaaattagtgagggaaattttgtgagggaaaacgtgaaatccctctctaattccgtcactaaattttgcgaccatgaaatttgggaggaatttcattt 21141032  T
Q  500 tttctgtcacnaattnccctccctaattttgcnttt 535  Q
    |||| ||||| |||| |||||  ||||||||| |||    
T  21141033 tttccgtcactaatttccctcgttaattttgctttt 21141068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 401 - 527
Target Start/End: Complemental strand, 12351730 - 12351604
Alignment:
Q  401 aaaagttagtgagggaaatttagtgagggaaaacatgaaatccctttctaantccgtcactaaattttgcgaccaaggaatttgtgaggaattttatgtt 500  Q
    |||| |||||||||||||||||| |||||||||| ||||||  || ||||| ||||||| ||||||||||||| ||||||||||||||||||||||| ||    
T  12351730 aaaaattagtgagggaaatttagagagggaaaacgtgaaatttctctctaattccgtcattaaattttgcgactaaggaatttgtgaggaattttatttt 12351631  T
Q  501 ttctgtcacnaattnccctccctaatt 527  Q
    ||| ||||| |||| |||||| |||||    
T  12351630 ttccgtcactaatttccctccttaatt 12351604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 400 - 530
Target Start/End: Complemental strand, 22055757 - 22055627
Alignment:
Q  400 caaaagttagtgagggaaatttagtgagggaaaacatgaaatccctttctaantccgtcactaaattttgcgaccaaggaatttgtgaggaattttatgt 499  Q
    ||||| |||||||||||| |||||||||| |||||||||||||||| ||||| ||| ||| | ||||||| |||||| |||||||||||||||||||| |    
T  22055757 caaaaattagtgagggaagtttagtgaggaaaaacatgaaatccctctctaattccctcattgaattttgtgaccaacgaatttgtgaggaattttattt 22055658  T
Q  500 tttctgtcacnaattnccctccctaattttg 530  Q
    |||||||||  |||| ||||| |||||||||    
T  22055657 tttctgtcattaatttccctctctaattttg 22055627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 401 - 530
Target Start/End: Original strand, 18048783 - 18048912
Alignment:
Q  401 aaaagttagtgagggaaatttagtgagggaaaacatgaaatccctttctaantccgtcactaaattttgcgaccaaggaatttgtgaggaattttatgtt 500  Q
    |||| ||||||||||||||||||||||| ||||||||||||||||  |||| ||  |||||||||||||||||||| ||||||||||| |||||||| ||    
T  18048783 aaaaattagtgagggaaatttagtgaggaaaaacatgaaatccctccctaattctctcactaaattttgcgaccaacgaatttgtgagaaattttatttt 18048882  T
Q  501 ttctgtcacnaattnccctccctaattttg 530  Q
    ||| ||||| ||||  |||| |||||||||    
T  18048883 ttccgtcactaattttcctctctaattttg 18048912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 400 - 529
Target Start/End: Original strand, 20182139 - 20182268
Alignment:
Q  400 caaaagttagtgagggaaatttagtgagggaaaacatgaaatccctttctaantccgtcactaaattttgcgaccaaggaatttgtgaggaattttatgt 499  Q
    ||||| ||||||||| |||||| |||||||||||| |||||||||| ||||| |||||||||||||||||||| || | |||||||||||||||| || |    
T  20182139 caaaaattagtgaggcaaattttgtgagggaaaacgtgaaatccctctctaattccgtcactaaattttgcgatcatgaaatttgtgaggaatttcattt 20182238  T
Q  500 tttctgtcacnaattnccctccctaatttt 529  Q
    |||| ||||| |||| ||||| ||||||||    
T  20182239 tttccgtcactaatttccctcgctaatttt 20182268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 400 - 529
Target Start/End: Complemental strand, 22153852 - 22153723
Alignment:
Q  400 caaaagttagtgagggaaatttagtgagggaaaacatgaaatccctttctaantccgtcactaaattttgcgaccaaggaatttgtgaggaattttatgt 499  Q
    ||||| ||||||||| |||||| |||||||||||| |||||||||| ||||| |||||||||||||||||||| || | |||||||||||||||| || |    
T  22153852 caaaaattagtgaggcaaattttgtgagggaaaacgtgaaatccctctctaattccgtcactaaattttgcgatcatgaaatttgtgaggaatttcattt 22153753  T
Q  500 tttctgtcacnaattnccctccctaatttt 529  Q
    |||| ||||| |||| ||||| ||||||||    
T  22153752 tttccgtcactaatttccctcgctaatttt 22153723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 400 - 503
Target Start/End: Original strand, 27705416 - 27705519
Alignment:
Q  400 caaaagttagtgagggaaatttagtgagggaaaacatgaaatccctttctaantccgtcactaaattttgcgaccaaggaatttgtgaggaattttatgt 499  Q
    ||||| |||||||||||||||| |||||||||||| |||||||||| ||||| ||||||||||||||||||||||| |||||||||||||||||| || |    
T  27705416 caaaaattagtgagggaaattttgtgagggaaaacgtgaaatccctctctaattccgtcactaaattttgcgaccatggaatttgtgaggaatttcattt 27705515  T
Q  500 tttc 503  Q
    ||||    
T  27705516 tttc 27705519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 400 - 535
Target Start/End: Original strand, 2669303 - 2669438
Alignment:
Q  400 caaaagttagtgagggaaatttagtgagggaaaacatgaaatccctttctaantccgtcactaaattttgcgaccaaggaatttgtgaggaattttatgt 499  Q
    ||||| |||||||||||||||||||| || ||||| | |||| ||| ||||| |||||||||||||||||||||||||||||||||||||||||| || |    
T  2669303 caaaaattagtgagggaaatttagtgtggaaaaacgtaaaattcctctctaattccgtcactaaattttgcgaccaaggaatttgtgaggaatttcattt 2669402  T
Q  500 tttctgtcacnaattnccctccctaattttgcnttt 535  Q
    |||  ||||| |||| |||||  ||||||||| |||    
T  2669403 ttttcgtcactaatttccctcgttaattttgctttt 2669438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 400 - 535
Target Start/End: Complemental strand, 27796979 - 27796844
Alignment:
Q  400 caaaagttagtgagggaaatttagtgagggaaaacatgaaatccctttctaantccgtcactaaattttgcgaccaaggaatttgtgaggaattttatgt 499  Q
    ||||| ||||||||||| |||||||||||||||||||||||||||| ||||| |||||||||||||||||| | |||||||||| |||| ||| | || |    
T  27796979 caaaaattagtgagggatatttagtgagggaaaacatgaaatccctctctaattccgtcactaaattttgcaatcaaggaatttatgagaaatatcattt 27796880  T
Q  500 tttctgtcacnaattnccctccctaattttgcnttt 535  Q
    |||  ||||| |||| ||||| |||||||||| |||    
T  27796879 ttttcgtcactaatttccctcgctaattttgctttt 27796844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 406 - 535
Target Start/End: Complemental strand, 21990313 - 21990185
Alignment:
Q  406 ttagtgagggaaatttagtgagggaaaacatgaaatccctttctaantccgtcactaaattttgcgaccaaggaatttgtgaggaattttatgttttctg 505  Q
    ||||||||| ||||||||||||||||||| | |||||||| ||||| ||||||||||| ||||||||||||| |||||||||||||||| || ||||| |    
T  21990313 ttagtgaggaaaatttagtgagggaaaacgtaaaatccctctctaattccgtcactaatttttgcgaccaagaaatttgtgaggaatttcat-ttttccg 21990215  T
Q  506 tcacnaattnccctccctaattttgcnttt 535  Q
    |||  |||| ||||| |||||||||| |||    
T  21990214 tcattaatttccctcgctaattttgctttt 21990185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 420 - 535
Target Start/End: Complemental strand, 6605621 - 6605506
Alignment:
Q  420 ttagtgagggaaaacatgaaatccctttctaantccgtcactaaattttgcgaccaaggaatttgtgaggaattttatgttttctgtcacnaattnccct 519  Q
    ||||||||||||||||||||||| || ||||| |||||||||| |||||||||| ||| |||||||||||||||| || ||||| ||||| |||| ||||    
T  6605621 ttagtgagggaaaacatgaaatctctctctaattccgtcactatattttgcgactaagaaatttgtgaggaatttcattttttccgtcactaatttccct 6605522  T
Q  520 ccctaattttgcnttt 535  Q
    | |||||||||| |||    
T  6605521 cgctaattttgctttt 6605506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 416 - 535
Target Start/End: Original strand, 15448395 - 15448514
Alignment:
Q  416 aaatttagtgagggaaaacatgaaatccctttctaantccgtcactaaattttgcgaccaaggaatttgtgaggaattttatgttttctgtcacnaattn 515  Q
    ||||||||||||||||||| | |||||||| ||||| ||||||| ||||||||||||  |||||||||||||||||||| || ||||| ||||| ||||     
T  15448395 aaatttagtgagggaaaacgtaaaatccctctctaattccgtcattaaattttgcgattaaggaatttgtgaggaatttcattttttccgtcactaattt 15448494  T
Q  516 ccctccctaattttgcnttt 535  Q
    ||||| |||||||||| |||    
T  15448495 ccctcgctaattttgctttt 15448514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 401 - 521
Target Start/End: Original strand, 23281781 - 23281901
Alignment:
Q  401 aaaagttagtgagggaaatttagtgagggaaaacatgaaatccctttctaantccgtcactaaattttgcgaccaaggaatttgtgaggaattttatgtt 500  Q
    |||| |||| ||||||||||| |||||||||||| |||||||||| ||||| |||||||||||||||||||||||   ||||||||||||||||||| ||    
T  23281781 aaaaattagggagggaaattttgtgagggaaaacgtgaaatccctctctaattccgtcactaaattttgcgaccataaaatttgtgaggaattttatttt 23281880  T
Q  501 ttctgtcacnaattnccctcc 521  Q
    |||  |||| |||| ||||||    
T  23281881 ttccatcactaatttccctcc 23281901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 435 - 535
Target Start/End: Original strand, 14772690 - 14772790
Alignment:
Q  435 atgaaatccctttctaantccgtcactaaattttgcgaccaaggaatttgtgaggaattttatgttttctgtcacnaattnccctccctaattttgcntt 534  Q
    |||||||| || ||||| |||||||||||||||| |||||||||||||||||||||||||||||||||  ||||| |||| | |||||||||||||| ||    
T  14772690 atgaaatctctctctaattccgtcactaaattttacgaccaaggaatttgtgaggaattttatgtttttcgtcacaaatttctctccctaattttgcttt 14772789  T
Q  535 t 535  Q
    |    
T  14772790 t 14772790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 400 - 535
Target Start/End: Original strand, 9885237 - 9885372
Alignment:
Q  400 caaaagttagtgagggaaatttagtgagggaaaacatgaaatccctttctaantccgtcactaaattttgcgaccaaggaatttgtgaggaattttatgt 499  Q
    ||||| ||||||| | |||||||||||||||||||||||||||||| | ||| |  ||||||||||||||| |||||  ||||||||||  ||||||| |    
T  9885237 caaaaattagtgacgaaaatttagtgagggaaaacatgaaatccctctttaattttgtcactaaattttgcaaccaacaaatttgtgagagattttattt 9885336  T
Q  500 tttctgtcacnaattnccctccctaattttgcnttt 535  Q
    |||| ||||| |||| |||||||| ||||||| |||    
T  9885337 tttccgtcactaatttccctccctgattttgctttt 9885372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 400 - 535
Target Start/End: Original strand, 18492363 - 18492498
Alignment:
Q  400 caaaagttagtgagggaaatttagtgagggaaaacatgaaatccctttctaantccgtcactaaattttgcgaccaaggaatttgtgaggaattttatgt 499  Q
    ||||| |||||||| ||||||| || ||||||||| |||||||||  ||||| ||||||||||||||||||||||| |||||||||||| ||||| || |    
T  18492363 caaaaattagtgagagaaattttgtaagggaaaacgtgaaatcccactctaattccgtcactaaattttgcgaccatggaatttgtgagaaatttcattt 18492462  T
Q  500 tttctgtcacnaattnccctccctaattttgcnttt 535  Q
    |||| ||||| ||||  | || |||||||||| |||    
T  18492463 tttccgtcactaatttgcatcgctaattttgctttt 18492498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 425 - 535
Target Start/End: Original strand, 5360428 - 5360538
Alignment:
Q  425 gagggaaaacatgaaatccctttctaantccgtcactaaattttgcgaccaaggaatttgtgaggaattttatgttttctgtcacnaattnccctcccta 524  Q
    |||||||||| | ||||| || ||||| ||||||||||||||||||||||||  ||||||||||||||||||| ||||| ||||| |||| ||||| |||    
T  5360428 gagggaaaacgtaaaatctctctctaattccgtcactaaattttgcgaccaaaaaatttgtgaggaattttattttttccgtcactaatttccctcgcta 5360527  T
Q  525 attttgcnttt 535  Q
    ||||||| |||    
T  5360528 attttgctttt 5360538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 401 - 535
Target Start/End: Complemental strand, 16250946 - 16250812
Alignment:
Q  401 aaaagttagtgagggaaatttagtgagggaaaacatgaaatccctttctaantccgtcactaaattttgcgaccaaggaatttgtgaggaattttatgtt 500  Q
    |||| |||||||| ||||||| |||||||||||| ||||||| || ||||| || ||||||||||||||||| || | |||||||||||||||| || ||    
T  16250946 aaaaattagtgagagaaattttgtgagggaaaacgtgaaatctctctctaattctgtcactaaattttgcgatcatgaaatttgtgaggaatttcatttt 16250847  T
Q  501 ttctgtcacnaattnccctccctaattttgcnttt 535  Q
    ||| ||||| |||| |||||  ||||||||| |||    
T  16250846 ttccgtcactaatttccctcgttaattttgctttt 16250812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 420 - 530
Target Start/End: Original strand, 12499230 - 12499340
Alignment:
Q  420 ttagtgagggaaaacatgaaatccctttctaantccgtcactaaattttgcgaccaaggaatttgtgaggaattttatgttttctgtcacnaattnccct 519  Q
    ||||||||||||||| | |||||||| ||||| ||||||||||||||||||||||||  |||||||||||||||| || ||||| ||||| | || ||||    
T  12499230 ttagtgagggaaaacgtaaaatccctctctaactccgtcactaaattttgcgaccaaaaaatttgtgaggaatttcattttttccgtcactactttccct 12499329  T
Q  520 ccctaattttg 530  Q
    | |||||||||    
T  12499330 cgctaattttg 12499340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 420 - 530
Target Start/End: Original strand, 12506559 - 12506669
Alignment:
Q  420 ttagtgagggaaaacatgaaatccctttctaantccgtcactaaattttgcgaccaaggaatttgtgaggaattttatgttttctgtcacnaattnccct 519  Q
    ||||||||||||||| | |||||||| ||||| ||||||||||||||||||||||||  |||||||||||||||| || ||||| ||||| | || ||||    
T  12506559 ttagtgagggaaaacgtaaaatccctctctaactccgtcactaaattttgcgaccaaaaaatttgtgaggaatttcattttttccgtcactactttccct 12506658  T
Q  520 ccctaattttg 530  Q
    | |||||||||    
T  12506659 cgctaattttg 12506669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 420 - 530
Target Start/End: Complemental strand, 12509671 - 12509561
Alignment:
Q  420 ttagtgagggaaaacatgaaatccctttctaantccgtcactaaattttgcgaccaaggaatttgtgaggaattttatgttttctgtcacnaattnccct 519  Q
    ||||||||||||||| | |||||||| ||||| ||||||||||||||||||||||||  |||||||||||||||| || ||||| ||||| | || ||||    
T  12509671 ttagtgagggaaaacgtaaaatccctctctaactccgtcactaaattttgcgaccaaaaaatttgtgaggaatttcattttttccgtcactactttccct 12509572  T
Q  520 ccctaattttg 530  Q
    | |||||||||    
T  12509571 cgctaattttg 12509561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #46
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 406 - 535
Target Start/End: Complemental strand, 30834099 - 30833970
Alignment:
Q  406 ttagtgagggaaatttagtgagggaaaacatgaaatccctttctaantccgtcactaaattttgcgaccaaggaatttgtgaggaattttatgttttctg 505  Q
    ||||||| ||||||||||||||||| ||| | |||||||| ||||| || |||| ||||||||||||||||  |||| ||||||||||| || ||||| |    
T  30834099 ttagtgaaggaaatttagtgagggagaacgtaaaatccctctctaattctgtcattaaattttgcgaccaaaaaattagtgaggaatttcattttttccg 30834000  T
Q  506 tcacnaattnccctccctaattttgcnttt 535  Q
    |||| |||| ||||| |||||||||| |||    
T  30833999 tcactaatttccctcgctaattttgctttt 30833970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #47
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 420 - 529
Target Start/End: Original strand, 28668114 - 28668223
Alignment:
Q  420 ttagtgagggaaaacatgaaatccctttctaantccgtcactaaattttgcgaccaaggaatttgtgaggaattttatgttttctgtcacnaattnccct 519  Q
    |||||||||||||   | |||||||||||||| ||||||| |||||||||||| |||||||||||||||||||||||| ||||| |||||  ||| ||||    
T  28668114 ttagtgagggaaattgtaaaatccctttctaattccgtcattaaattttgcgatcaaggaatttgtgaggaattttattttttccgtcactgatttccct 28668213  T
Q  520 ccctaatttt 529  Q
    | ||||||||    
T  28668214 cgctaatttt 28668223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #48
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 420 - 535
Target Start/End: Complemental strand, 5192314 - 5192199
Alignment:
Q  420 ttagtgagggaaaacatgaaatccctttctaantccgtcactaaattttgcgaccaaggaatttgtgaggaattttatgttttctgtcacnaattnccct 519  Q
    ||||||||||||||| | |||||||| ||||| |||||||||||||||| ||||||| ||||||||||||||||| || |||||  |||| ||||  |||    
T  5192314 ttagtgagggaaaacgtaaaatccctctctaattccgtcactaaattttacgaccaaagaatttgtgaggaatttcattttttccttcactaattttcct 5192215  T
Q  520 ccctaattttgcnttt 535  Q
    | |||||||||| |||    
T  5192214 cgctaattttgctttt 5192199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #49
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 400 - 494
Target Start/End: Original strand, 14036614 - 14036708
Alignment:
Q  400 caaaagttagtgagggaaatttagtgagggaaaacatgaaatccctttctaantccgtcactaaattttgcgaccaaggaatttgtgaggaattt 494  Q
    ||||| |||||||||||||||| |||||||||||| |||||||||| ||||| || |||| |||||||||||| || ||||||||||||||||||    
T  14036614 caaaaattagtgagggaaattttgtgagggaaaacgtgaaatccctctctaattctgtcattaaattttgcgatcatggaatttgtgaggaattt 14036708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #50
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 400 - 502
Target Start/End: Complemental strand, 21691641 - 21691539
Alignment:
Q  400 caaaagttagtgagggaaatttagtgagggaaaacatgaaatccctttctaantccgtcactaaattttgcgaccaaggaatttgtgaggaattttatgt 499  Q
    ||||| |||||||||||| ||||| |||| ||||| |||||||||| ||||| | |||||||||||||||||||||| ||||||||||| |||||||| |    
T  21691641 caaaaattagtgagggaattttagagaggaaaaacgtgaaatccctctctaatttcgtcactaaattttgcgaccaaagaatttgtgagaaattttattt 21691542  T
Q  500 ttt 502  Q
    |||    
T  21691541 ttt 21691539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #51
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 400 - 529
Target Start/End: Complemental strand, 12160991 - 12160863
Alignment:
Q  400 caaaagttagtgagggaaatttagtgagggaaaacatgaaatccctttctaantccgtcactaaattttgcgaccaaggaatttgtgaggaattttatgt 499  Q
    ||||| ||||||||| | ||||||||||||||||||| |||||||| ||||| | |||||||||||||| ||| |||  |||||||||||||||| || |    
T  12160991 caaaaattagtgaggaatatttagtgagggaaaacataaaatccctctctaatttcgtcactaaatttt-cgatcaaaaaatttgtgaggaatttcattt 12160893  T
Q  500 tttctgtcacnaattnccctccctaatttt 529  Q
    |||  ||||| |||| ||||| ||||||||    
T  12160892 tttacgtcactaatttccctcgctaatttt 12160863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #52
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 420 - 503
Target Start/End: Original strand, 13145016 - 13145099
Alignment:
Q  420 ttagtgagggaaaacatgaaatccctttctaantccgtcactaaattttgcgaccaaggaatttgtgaggaattttatgttttc 503  Q
    ||||||||||||||| ||||||| || | ||| |||||||||||||||||||||||||||||||||||||||||| || |||||    
T  13145016 ttagtgagggaaaacgtgaaatctctctttaattccgtcactaaattttgcgaccaaggaatttgtgaggaatttcattttttc 13145099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #53
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 420 - 503
Target Start/End: Original strand, 33547560 - 33547643
Alignment:
Q  420 ttagtgagggaaaacatgaaatccctttctaantccgtcactaaattttgcgaccaaggaatttgtgaggaattttatgttttc 503  Q
    |||||||||||||||||||||||||| ||||| |  ||||||||||||||||||||| |||||||||||| ||||||| |||||    
T  33547560 ttagtgagggaaaacatgaaatccctatctaattttgtcactaaattttgcgaccaaagaatttgtgagggattttattttttc 33547643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #54
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 401 - 514
Target Start/End: Complemental strand, 343707 - 343594
Alignment:
Q  401 aaaagttagtgagggaaatttagtgagggaaaacatgaaatccctttctaantccgtcactaaattttgcgaccaaggaatttgtgaggaattttatgtt 500  Q
    |||| ||||||||||||||||| ||||||||||| | |||||||| ||||| || ||||||||| |||||||||||  |||||||||||||||| || ||    
T  343707 aaaaattagtgagggaaatttaatgagggaaaacgtaaaatccctctctaattctgtcactaaaatttgcgaccaaaaaatttgtgaggaatttcatttt 343608  T
Q  501 ttctgtcacnaatt 514  Q
    ||  ||||| ||||    
T  343607 ttacgtcactaatt 343594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #55
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 400 - 535
Target Start/End: Original strand, 9060085 - 9060219
Alignment:
Q  400 caaaagttagtgagggaaatttagtgagggaaaacatgaaatccctttctaantccgtcactaaattttgcgaccaaggaatttgtgaggaattttatgt 499  Q
    ||||| ||||||| |||||||||| |||||||| ||||||||  || ||||| || |||||||||||||||||||||  ||||||||||| ||||||| |    
T  9060085 caaaaattagtgaaggaaatttagcgagggaaa-catgaaatttctctctaattctgtcactaaattttgcgaccaaaaaatttgtgagggattttattt 9060183  T
Q  500 tttctgtcacnaattnccctccctaattttgcnttt 535  Q
    |||| ||||| |||| | |||  ||||||||| |||    
T  9060184 tttccgtcactaatttcgctctttaattttgctttt 9060219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #56
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 420 - 537
Target Start/End: Original strand, 11350196 - 11350310
Alignment:
Q  420 ttagtgagggaaaacatgaaatccctttctaantccgtcactaaattttgcgaccaaggaatttgtgaggaattttatgttttctgtcacnaattnccct 519  Q
    ||||||||||||||||| ||||| || ||||| || |||||||||||||||||  |||||||||||   || |||| ||||||| ||||| |||| ||||    
T  11350196 ttagtgagggaaaacataaaatcgctctctaattctgtcactaaattttgcgattaaggaatttgt---gatttttttgttttccgtcacaaatttccct 11350292  T
Q  520 ccctaattttgcntttcc 537  Q
    |||||||||||| |||||    
T  11350293 ccctaattttgcttttcc 11350310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #57
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 400 - 508
Target Start/End: Original strand, 17919530 - 17919638
Alignment:
Q  400 caaaagttagtgagggaaatttagtgagggaaaacatgaaatccctttctaantccgtcactaaattttgcgaccaaggaatttgtgaggaattttatgt 499  Q
    ||||| |||||||||||||| || |||||||||   | |||||||| ||||| ||||||||||||||||||||||||||||||| ||| |||||| || |    
T  17919530 caaaaattagtgagggaaatgtaatgagggaaactgtaaaatccctctctaattccgtcactaaattttgcgaccaaggaatttatgatgaatttcattt 17919629  T
Q  500 tttctgtca 508  Q
    |||| ||||    
T  17919630 tttccgtca 17919638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #58
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 436 - 529
Target Start/End: Original strand, 15509186 - 15509279
Alignment:
Q  436 tgaaatccctttctaantccgtcactaaattttgcgaccaaggaatttgtgaggaattttatgttttctgtcacnaattnccctccctaatttt 529  Q
    |||||||||| ||||| |||||||||||||||| |||||| | |||||||||||||||| || ||||| ||||| |||| ||||| ||||||||    
T  15509186 tgaaatccctctctaattccgtcactaaattttccgaccatgaaatttgtgaggaatttcattttttccgtcactaatttccctcgctaatttt 15509279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #59
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 420 - 535
Target Start/End: Complemental strand, 15961532 - 15961417
Alignment:
Q  420 ttagtgagggaaaacatgaaatccctttctaantccgtcactaaattttgcgaccaaggaatttgtgaggaattttatgttttctgtcacnaattnccct 519  Q
    ||||||||||||||| | |||| ||| ||||| ||||| |||||||||||||| |||| ||||||| |||||||| || ||||| ||||| |||| ||||    
T  15961532 ttagtgagggaaaacgtaaaattcctctctaattccgttactaaattttgcgatcaagaaatttgtaaggaatttcattttttccgtcactaatttccct 15961433  T
Q  520 ccctaattttgcnttt 535  Q
    |  ||||||||| |||    
T  15961432 cgttaattttgctttt 15961417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #60
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 400 - 494
Target Start/End: Complemental strand, 19175921 - 19175828
Alignment:
Q  400 caaaagttagtgagggaaatttagtgagggaaaacatgaaatccctttctaantccgtcactaaattttgcgaccaaggaatttgtgaggaattt 494  Q
    ||||| |||| |||||||||| ||||||||||||  | |||| ||| ||||| ||||||||||||||||||||||||| ||||||||||||||||    
T  19175921 caaaaattagagagggaaatt-agtgagggaaaatgtaaaattcctctctaattccgtcactaaattttgcgaccaagaaatttgtgaggaattt 19175828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #61
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 420 - 537
Target Start/End: Original strand, 1954895 - 1955011
Alignment:
Q  420 ttagtgagggaaaacatgaaatccctttctaantccgtcactaaattttgcgaccaaggaatttgtgaggaattttatgttttctgtcacnaattnccct 519  Q
    ||||||| |||||||||||||||| | | ||| ||| |||| |||||||| ||||||| ||||||||| ||||||||| ||||| |||||  ||| ||||    
T  1954895 ttagtgaaggaaaacatgaaatcc-tctataattccatcacaaaattttgtgaccaagaaatttgtgacgaattttattttttccgtcactcatttccct 1954993  T
Q  520 ccctaattttgcntttcc 537  Q
     ||||||||||| |||||    
T  1954994 tcctaattttgcttttcc 1955011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #62
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 420 - 537
Target Start/End: Original strand, 6065451 - 6065568
Alignment:
Q  420 ttagtgagggaaaacatgaaatccctttctaantccgtcactaaattttgcgaccaaggaatttgtgaggaattttatgttttctgtcacnaattnccct 519  Q
    |||||||||||||||| ||||| ||| ||||| |  |||| |||||||||||| ||| |||||||||||  ||||||| ||||| ||||  ||||  |||    
T  6065451 ttagtgagggaaaacaagaaattcctctctaattttgtcattaaattttgcgatcaaagaatttgtgagagattttattttttccgtcattaattttcct 6065550  T
Q  520 ccctaattttgcntttcc 537  Q
    |||||||||||| |||||    
T  6065551 ccctaattttgcttttcc 6065568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #63
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 400 - 537
Target Start/End: Original strand, 16118140 - 16118277
Alignment:
Q  400 caaaagttagtgagggaaatttagtgagggaaaacatgaaatccctttctaantccgtcactaaattttgcgaccaaggaatttgtgaggaattttatgt 499  Q
    ||||| ||||||||  ||||||| ||||||| ||||||||||| || ||||| | ||||| |||||||||||| | |||||||||| ||  ||||||  |    
T  16118140 caaaaattagtgagaaaaatttaatgagggagaacatgaaatctctctctaatttcgtcattaaattttgcgatcgaggaatttgtaagagattttagtt 16118239  T
Q  500 tttctgtcacnaattnccctccctaattttgcntttcc 537  Q
    |||| ||||| |||| || ||||||||||| | |||||    
T  16118240 tttccgtcactaatttccgtccctaattttacctttcc 16118277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #64
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 407 - 535
Target Start/End: Complemental strand, 12157514 - 12157386
Alignment:
Q  407 tagtgagggaaatttagtgagggaaaacatgaaatccctttctaantccgtcactaaattttgcgaccaaggaatttgtgaggaattttatgttttctgt 506  Q
    |||||||| |||||||| |||  |||| ||||||||  | ||||| ||||||||||||||||  |||||| || ||||| ||| ||||||| ||||| ||    
T  12157514 tagtgaggaaaatttagagagcaaaaatatgaaatcattctctaattccgtcactaaattttatgaccaaagattttgtaagggattttattttttccgt 12157415  T
Q  507 cacnaattnccctccctaattttgcnttt 535  Q
    ||| |||| |||||| ||||||||| |||    
T  12157414 cactaatttccctccttaattttgctttt 12157386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #65
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 449 - 529
Target Start/End: Original strand, 10458807 - 10458887
Alignment:
Q  449 taantccgtcactaaattttgcgaccaaggaatttgtgaggaattttatgttttctgtcacnaattnccctccctaatttt 529  Q
    ||| ||| |||||||||||||| |||||||||||||||||||| || || ||||| ||||| |||| ||||| ||||||||    
T  10458807 taattccatcactaaattttgcaaccaaggaatttgtgaggaaattcattttttccgtcactaatttccctcactaatttt 10458887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #66
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 425 - 529
Target Start/End: Complemental strand, 12205305 - 12205201
Alignment:
Q  425 gagggaaaacatgaaatccctttctaantccgtcactaaattttgcgaccaaggaatttgtgaggaattttatgttttctgtcacnaattnccctcccta 524  Q
    |||||||||| ||||||||||  |||| |||||||||||||||| |||   | ||||||||||| ||||| |||||||| ||||| |||| | || ||||    
T  12205305 gagggaaaacgtgaaatccctcactaattccgtcactaaattttacgatttaagaatttgtgagaaatttaatgttttccgtcactaatttctcttccta 12205206  T
Q  525 atttt 529  Q
    |||||    
T  12205205 atttt 12205201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #67
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 424 - 530
Target Start/End: Complemental strand, 10929618 - 10929511
Alignment:
Q  424 tgagggaaaacatgaaatccctttctaantccgtcactaaattttgcgaccaaggaatttgtga-ggaattttatgttttctgtcacnaattnccctccc 522  Q
    ||||||||||||||||||| || | | | ||||||| ||||||||||||| ||||||||||||| || |||| || ||||| ||||| ||||  | ||||    
T  10929618 tgagggaaaacatgaaatctctctttgattccgtcattaaattttgcgacaaaggaatttgtgaggggatttaattttttccgtcactaattttcttccc 10929519  T
Q  523 taattttg 530  Q
    ||||||||    
T  10929518 taattttg 10929511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #68
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 420 - 530
Target Start/End: Complemental strand, 20692936 - 20692826
Alignment:
Q  420 ttagtgagggaaaacatgaaatccctttctaantccgtcactaaattttgcgaccaaggaatttgtgaggaattttatgttttctgtcacnaattnccct 519  Q
    ||||||||||||||| | |||||||| ||||| | ||||||||||||||||||||||  || || | | ||||||||| ||||| ||||| ||||  |||    
T  20692936 ttagtgagggaaaacgtaaaatccctctctaatttcgtcactaaattttgcgaccaaaaaacttataaagaattttattttttccgtcactaattttcct 20692837  T
Q  520 ccctaattttg 530  Q
    |  ||||||||    
T  20692836 cgttaattttg 20692826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #69
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 401 - 503
Target Start/End: Original strand, 5270387 - 5270490
Alignment:
Q  401 aaaagttagtgagggaaatttagtgagggaaaacatgaaatccctttctaantccgtcactaaattttgcga-ccaaggaatttgtgaggaattttatgt 499  Q
    |||| |||||||||||| ||||| |||||||||  |||||| ||| ||||| |||||||||||||||| ||| | ||  |||||||||| |||||||| |    
T  5270387 aaaaattagtgagggaattttagagagggaaaatgtgaaattcctctctaattccgtcactaaattttacgatcaaaaaaatttgtgagaaattttattt 5270486  T
Q  500 tttc 503  Q
    ||||    
T  5270487 tttc 5270490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #70
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 401 - 470
Target Start/End: Complemental strand, 11431784 - 11431715
Alignment:
Q  401 aaaagttagtgagggaaatttagtgagggaaaacatgaaatccctttctaantccgtcactaaattttgc 470  Q
    |||| |||||||||||||||||| |||| |||||  || |||||| | ||| ||||||||||||||||||    
T  11431784 aaaatttagtgagggaaatttagagaggaaaaacgcgatatccctctttaattccgtcactaaattttgc 11431715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #71
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 462 - 529
Target Start/End: Original strand, 5250195 - 5250262
Alignment:
Q  462 aaattttgcgaccaaggaatttgtgaggaattttatgttttctgtcacnaattnccctccctaatttt 529  Q
    |||||||||||||||| ||||| |||||||||| || ||||| ||||| |||| ||||| || |||||    
T  5250195 aaattttgcgaccaagaaatttatgaggaatttcattttttccgtcactaatttccctcgctgatttt 5250262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #72
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 409 - 537
Target Start/End: Complemental strand, 30745853 - 30745727
Alignment:
Q  409 gtgagggaaatttagtgagggaaaacatgaaatccctttctaantccgtcactaaattttgcgaccaaggaatttgtgaggaattttatgttttctgtca 508  Q
    ||||| |||| |||| |||||||||| ||||||| ||  |||| |||||||||||||||| ||| |||  ||||||| |   ||||||| |||||| |||    
T  30745853 gtgagagaaaattagagagggaaaacgtgaaatctct--ctaagtccgtcactaaattttacgatcaaaaaatttgtaaatgattttattttttctatca 30745756  T
Q  509 cnaattnccctccctaattttgcntttcc 537  Q
    | ||||   |||||||| ||||| |||||    
T  30745755 ctaattcttctccctaactttgcttttcc 30745727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #73
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 447 - 494
Target Start/End: Complemental strand, 3673231 - 3673184
Alignment:
Q  447 tctaantccgtcactaaattttgcgaccaaggaatttgtgaggaattt 494  Q
    ||||| |||||||||||||||| |||||||  ||||||||||||||||    
T  3673231 tctaattccgtcactaaattttacgaccaaaaaatttgtgaggaattt 3673184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #74
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 420 - 488
Target Start/End: Original strand, 16764825 - 16764893
Alignment:
Q  420 ttagtgagggaaaacatgaaatccctttctaantccgtcactaaattttgcgaccaaggaatttgtgag 488  Q
    |||| ||||||||||||||||||||||||||| ||  || || ||||||| ||| ||  ||||||||||    
T  16764825 ttagagagggaaaacatgaaatccctttctaattctatccctgaattttgtgacaaaaaaatttgtgag 16764893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 109; Significance: 1e-54; HSPs: 64)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 401 - 537
Target Start/End: Complemental strand, 39979768 - 39979632
Alignment:
Q  401 aaaagttagtgagggaaatttagtgagggaaaacatgaaatccctttctaantccgtcactaaattttgcgaccaaggaatttgtgaggaattttatgtt 500  Q
    |||| |||||||||||||||||||||||||||||||||||||||| ||||| ||||||| ||||||||||||||||||||||||||||||||||||||||    
T  39979768 aaaaattagtgagggaaatttagtgagggaaaacatgaaatccctctctaattccgtcattaaattttgcgaccaaggaatttgtgaggaattttatgtt 39979669  T
Q  501 ttctgtcacnaattnccctccctaattttgcntttcc 537  Q
    ||| ||||| |||| |||||||||||||||| |||||    
T  39979668 ttccgtcacaaatttccctccctaattttgcttttcc 39979632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 400 - 528
Target Start/End: Original strand, 36636500 - 36636628
Alignment:
Q  400 caaaagttagtgagggaaatttagtgagggaaaacatgaaatccctttctaantccgtcactaaattttgcgaccaaggaatttgtgaggaattttatgt 499  Q
    ||||| ||||||||| |||||||||||||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  36636500 caaaaattagtgaggcaaatttagtgagggaaaacatgaaatccctctctaattccgtcactaaattttgcgaccaaggaatttgtgaggaattttatgt 36636599  T
Q  500 tttctgtcacnaattnccctccctaattt 528  Q
    |||| ||||| |||| |||||||||||||    
T  36636600 tttccgtcacaaatttccctccctaattt 36636628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 400 - 537
Target Start/End: Complemental strand, 40847580 - 40847443
Alignment:
Q  400 caaaagttagtgagggaaatttagtgagggaaaacatgaaatccctttctaantccgtcactaaattttgcgaccaaggaatttgtgaggaattttatgt 499  Q
    ||||| |||||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||||||||||||| |||||||||| |||||||||||    
T  40847580 caaaaattagtgagggaaatttagtgagggaaaacatgaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgacgaattttatgt 40847481  T
Q  500 tttctgtcacnaattnccctccctaattttgcntttcc 537  Q
    |||| ||||| |||| |||||||||||||| | |||||    
T  40847480 tttccgtcacaaatttccctccctaattttacttttcc 40847443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 96; E-Value: 8e-47
Query Start/End: Original strand, 400 - 535
Target Start/End: Original strand, 23232033 - 23232168
Alignment:
Q  400 caaaagttagtgagggaaatttagtgagggaaaacatgaaatccctttctaantccgtcactaaattttgcgaccaaggaatttgtgaggaattttatgt 499  Q
    ||||| ||||||||||| |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||||||||||||| || |    
T  23232033 caaaaattagtgagggatatttagtgagggaaaacatgaaatccctttctaattccgtcactaaattttgcgaccaaagaatttgtgaggaatttcattt 23232132  T
Q  500 tttctgtcacnaattnccctccctaattttgcnttt 535  Q
    |||| ||||| |||| ||||| |||||||||| |||    
T  23232133 tttccgtcactaatttccctctctaattttgctttt 23232168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 96; E-Value: 8e-47
Query Start/End: Original strand, 400 - 535
Target Start/End: Original strand, 28800872 - 28801007
Alignment:
Q  400 caaaagttagtgagggaaatttagtgagggaaaacatgaaatccctttctaantccgtcactaaattttgcgaccaaggaatttgtgaggaattttatgt 499  Q
    ||||| ||||||||||| |||||||||||||||||||||||||||| ||||| ||||||||||||||||||||||||| |||||||||||||||| || |    
T  28800872 caaaaattagtgagggatatttagtgagggaaaacatgaaatccctctctaattccgtcactaaattttgcgaccaagaaatttgtgaggaatttcattt 28800971  T
Q  500 tttctgtcacnaattnccctccctaattttgcnttt 535  Q
    |||||||||| |||| ||||| |||||||||| |||    
T  28800972 tttctgtcactaatttccctcgctaattttgctttt 28801007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 93; E-Value: 5e-45
Query Start/End: Original strand, 400 - 529
Target Start/End: Complemental strand, 15014550 - 15014421
Alignment:
Q  400 caaaagttagtgagggaaatttagtgagggaaaacatgaaatccctttctaantccgtcactaaattttgcgaccaaggaatttgtgaggaattttatgt 499  Q
    ||||| ||||||||||| |||||||||||||||||||||||||||| ||||| ||||||||||||||||||||| ||||||||||||||||||||||| |    
T  15014550 caaaaattagtgagggatatttagtgagggaaaacatgaaatccctctctaattccgtcactaaattttgcgactaaggaatttgtgaggaattttattt 15014451  T
Q  500 tttctgtcacnaattnccctccctaatttt 529  Q
    |||| ||||| |||| ||||| ||||||||    
T  15014450 tttccgtcaccaatttccctcgctaatttt 15014421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 400 - 535
Target Start/End: Original strand, 22486388 - 22486523
Alignment:
Q  400 caaaagttagtgagggaaatttagtgagggaaaacatgaaatccctttctaantccgtcactaaattttgcgaccaaggaatttgtgaggaattttatgt 499  Q
    ||||| ||||||||||||||||||||| ||||||| |||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||| || |    
T  22486388 caaaaattagtgagggaaatttagtgacggaaaacgtgaaatccctctctaattccgtcactaaattttgcgaccaaggaatttgtgaggaatttcattt 22486487  T
Q  500 tttctgtcacnaattnccctccctaattttgcnttt 535  Q
    |||| ||||| |||| ||||| |||||||||| |||    
T  22486488 tttccgtcactaatttccctcgctaattttgctttt 22486523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 400 - 529
Target Start/End: Complemental strand, 47523795 - 47523666
Alignment:
Q  400 caaaagttagtgagggaaatttagtgagggaaaacatgaaatccctttctaantccgtcactaaattttgcgaccaaggaatttgtgaggaattttatgt 499  Q
    ||||| ||||||||||| |||||||||||||||||||||||||||| ||||| |||||||||||||||||||||||| ||||||||||||||||| || |    
T  47523795 caaaaattagtgagggatatttagtgagggaaaacatgaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgaggaatttcattt 47523696  T
Q  500 tttctgtcacnaattnccctccctaatttt 529  Q
    |||| ||||| |||| ||||| ||||||||    
T  47523695 tttccgtcactaatttccctcgctaatttt 47523666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 88; E-Value: 5e-42
Query Start/End: Original strand, 400 - 535
Target Start/End: Original strand, 27806012 - 27806147
Alignment:
Q  400 caaaagttagtgagggaaatttagtgagggaaaacatgaaatccctttctaantccgtcactaaattttgcgaccaaggaatttgtgaggaattttatgt 499  Q
    ||||| ||||||||||| |||||||||||||||||||||||||||| ||||| |||||||||||||||| ||||||||||||||||||||||||| || |    
T  27806012 caaaaattagtgagggatatttagtgagggaaaacatgaaatccctctctaattccgtcactaaattttacgaccaaggaatttgtgaggaatttcattt 27806111  T
Q  500 tttctgtcacnaattnccctccctaattttgcnttt 535  Q
    |||| ||||| ||||  |||| |||||||||| |||    
T  27806112 tttccgtcactaattttcctcgctaattttgctttt 27806147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 86; E-Value: 7e-41
Query Start/End: Original strand, 420 - 537
Target Start/End: Complemental strand, 1824325 - 1824208
Alignment:
Q  420 ttagtgagggaaaacatgaaatccctttctaantccgtcactaaattttgcgaccaaggaatttgtgaggaattttatgttttctgtcacnaattnccct 519  Q
    |||||||||||||| ||||||| ||| ||||| ||||||||||||||||||||||||| ||||||||||||||||||||||||| ||||| |||| ||||    
T  1824325 ttagtgagggaaaatatgaaattcctctctaattccgtcactaaattttgcgaccaagaaatttgtgaggaattttatgttttccgtcacaaatttccct 1824226  T
Q  520 ccctaattttgcntttcc 537  Q
    |||||||||||| |||||    
T  1824225 ccctaattttgcttttcc 1824208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 86; E-Value: 7e-41
Query Start/End: Original strand, 400 - 537
Target Start/End: Original strand, 20174014 - 20174151
Alignment:
Q  400 caaaagttagtgagggaaatttagtgagggaaaacatgaaatccctttctaantccgtcactaaattttgcgaccaaggaatttgtgaggaattttatgt 499  Q
    ||||| |||||||||||||||| |||||||||||| |||||||||| ||||| ||||||||||||||||||||||| | |||||||||||||||| || |    
T  20174014 caaaaattagtgagggaaattttgtgagggaaaacgtgaaatccctctctaattccgtcactaaattttgcgaccatgaaatttgtgaggaatttcattt 20174113  T
Q  500 tttctgtcacnaattnccctccctaattttgcntttcc 537  Q
    |||| ||||| |||| ||||| |||||||||| |||||    
T  20174114 tttccgtcactaatttccctcgctaattttgcttttcc 20174151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 86; E-Value: 7e-41
Query Start/End: Original strand, 406 - 535
Target Start/End: Complemental strand, 21917473 - 21917344
Alignment:
Q  406 ttagtgagggaaatttagtgagggaaaacatgaaatccctttctaantccgtcactaaattttgcgaccaaggaatttgtgaggaattttatgttttctg 505  Q
    ||||||||||| ||||||||||||||||| | |||||||| ||||| |||||||||||||||||||||||||||||||||||||||||| || ||||| |    
T  21917473 ttagtgagggacatttagtgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaaggaatttgtgaggaatttcattttttccg 21917374  T
Q  506 tcacnaattnccctccctaattttgcnttt 535  Q
    |||| |||| ||||| |||||||||| |||    
T  21917373 tcactaatttccctcactaattttgctttt 21917344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 86; E-Value: 7e-41
Query Start/End: Original strand, 420 - 537
Target Start/End: Original strand, 26577279 - 26577396
Alignment:
Q  420 ttagtgagggaaaacatgaaatccctttctaantccgtcactaaattttgcgaccaaggaatttgtgaggaattttatgttttctgtcacnaattnccct 519  Q
    |||||||||||||||||||||||||| |||||  |||||||||||||||||||||||||||||||||||||||||||||||||| ||||| | || ||||    
T  26577279 ttagtgagggaaaacatgaaatccctctctaataccgtcactaaattttgcgaccaaggaatttgtgaggaattttatgttttccgtcacaagtttccct 26577378  T
Q  520 ccctaattttgcntttcc 537  Q
     ||||||||||| |||||    
T  26577379 tcctaattttgcttttcc 26577396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 86; E-Value: 7e-41
Query Start/End: Original strand, 400 - 537
Target Start/End: Original strand, 36993814 - 36993951
Alignment:
Q  400 caaaagttagtgagggaaatttagtgagggaaaacatgaaatccctttctaantccgtcactaaattttgcgaccaaggaatttgtgaggaattttatgt 499  Q
    ||||| ||||||| ||||||||||||||| ||||||||||||| |||||||| |||||||||||||||| |||| ||| ||||||||||||||||||| |    
T  36993814 caaaaattagtgaaggaaatttagtgaggaaaaacatgaaatctctttctaattccgtcactaaattttacgactaagaaatttgtgaggaattttatat 36993913  T
Q  500 tttctgtcacnaattnccctccctaattttgcntttcc 537  Q
    ||||  |||| |||| |||||||||||||||| |||||    
T  36993914 tttccatcacaaatttccctccctaattttgcttttcc 36993951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 400 - 528
Target Start/End: Complemental strand, 7733457 - 7733329
Alignment:
Q  400 caaaagttagtgagggaaatttagtgagggaaaacatgaaatccctttctaantccgtcactaaattttgcgaccaaggaatttgtgaggaattttatgt 499  Q
    ||||| ||||||||||| ||||||||||| |||||||||||||||| ||||| |||||| ||||||||||||||||||||||||||||||||||| || |    
T  7733457 caaaaattagtgagggatatttagtgaggtaaaacatgaaatccctctctaattccgtctctaaattttgcgaccaaggaatttgtgaggaatttcattt 7733358  T
Q  500 tttctgtcacnaattnccctccctaattt 528  Q
    |||| ||||| |||| ||||| |||||||    
T  7733357 tttccgtcactaatttccctcgctaattt 7733329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 401 - 514
Target Start/End: Complemental strand, 23577333 - 23577220
Alignment:
Q  401 aaaagttagtgagggaaatttagtgagggaaaacatgaaatccctttctaantccgtcactaaattttgcgaccaaggaatttgtgaggaattttatgtt 500  Q
    |||| ||||||||||||||||||||||||||||| |||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||| || ||    
T  23577333 aaaaattagtgagggaaatttagtgagggaaaacgtgaaatccctatctaattccgtcactaaattttgcgaccaaggaatttgtgaggaatttcatttt 23577234  T
Q  501 ttctgtcacnaatt 514  Q
    ||| ||||| ||||    
T  23577233 ttccgtcactaatt 23577220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 400 - 535
Target Start/End: Complemental strand, 31425656 - 31425521
Alignment:
Q  400 caaaagttagtgagggaaatttagtgagggaaaacatgaaatccctttctaantccgtcactaaattttgcgaccaaggaatttgtgaggaattttatgt 499  Q
    ||||| ||||||||||||||||||||||||||||| | |||||||| ||||| |||||||||||||||||||||||  ||||||||||||||||| || |    
T  31425656 caaaaattagtgagggaaatttagtgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccacagaatttgtgaggaatttcattt 31425557  T
Q  500 tttctgtcacnaattnccctccctaattttgcnttt 535  Q
    |||| ||||| |||| ||||| |||||||||| |||    
T  31425556 tttccgtcactaatttccctcgctaattttgctttt 31425521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 400 - 537
Target Start/End: Original strand, 2457664 - 2457799
Alignment:
Q  400 caaaagttagtgagggaaatttagtgagggaaaacatgaaatccctttctaantccgtcactaaattttgcgaccaaggaatttgtgaggaattttatgt 499  Q
    ||||| ||||||||| |||||| ||||||||||||||||||||||| || || ||||||||||||||||||||| || |||||||||||  ||||||| |    
T  2457664 caaaaattagtgaggaaaattttgtgagggaaaacatgaaatccctctcaaattccgtcactaaattttgcgacaaaagaatttgtgag--attttatat 2457761  T
Q  500 tttctgtcacnaattnccctccctaattttgcntttcc 537  Q
    |||||||||| |||| |||||||||||||||| |||||    
T  2457762 tttctgtcactaatttccctccctaattttgcttttcc 2457799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 400 - 537
Target Start/End: Original strand, 1907349 - 1907486
Alignment:
Q  400 caaaagttagtgagggaaatttagtgagggaaaacatgaaatccctttctaantccgtcactaaattttgcgaccaaggaatttgtgaggaattttatgt 499  Q
    ||||| ||||||||| |||| ||||||||||||||||||||||||| ||||| | |||||||||||||||||||||| |||| ||||||| ||||||| |    
T  1907349 caaaaattagtgaggaaaatctagtgagggaaaacatgaaatccctctctaatttcgtcactaaattttgcgaccaaagaatatgtgagggattttattt 1907448  T
Q  500 tttctgtcacnaattnccctccctaattttgcntttcc 537  Q
    |||| ||||| |||| ||||| |||||||||| |||||    
T  1907449 tttccgtcactaatttccctcgctaattttgcttttcc 1907486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 420 - 537
Target Start/End: Original strand, 4514779 - 4514896
Alignment:
Q  420 ttagtgagggaaaacatgaaatccctttctaantccgtcactaaattttgcgaccaaggaatttgtgaggaattttatgttttctgtcacnaattnccct 519  Q
    |||||||||||||| ||||||||||| ||||| ||| |||||||||||||||||||| ||||||||||| |||||||||||||| ||||| |||| ||||    
T  4514779 ttagtgagggaaaatatgaaatccctctctaattccttcactaaattttgcgaccaaagaatttgtgagaaattttatgttttccgtcacaaatttccct 4514878  T
Q  520 ccctaattttgcntttcc 537  Q
    |||||||||||| |||||    
T  4514879 ccctaattttgcttttcc 4514896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 406 - 535
Target Start/End: Original strand, 18217829 - 18217958
Alignment:
Q  406 ttagtgagggaaatttagtgagggaaaacatgaaatccctttctaantccgtcactaaattttgcgaccaaggaatttgtgaggaattttatgttttctg 505  Q
    ||||||||||||||||||||||| ||||| | |||||||| ||||| | |||||||||||||||||||||||||||||||||||||||| || ||||| |    
T  18217829 ttagtgagggaaatttagtgaggaaaaacgtaaaatccctctctaatttcgtcactaaattttgcgaccaaggaatttgtgaggaatttcattttttccg 18217928  T
Q  506 tcacnaattnccctccctaattttgcnttt 535  Q
    |||| |||| ||||| |||||||||| |||    
T  18217929 tcactaatttccctcgctaattttgctttt 18217958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 410 - 535
Target Start/End: Original strand, 1842898 - 1843023
Alignment:
Q  410 tgagggaaatttagtgagggaaaacatgaaatccctttctaantccgtcactaaattttgcgaccaaggaatttgtgaggaattttatgttttctgtcac 509  Q
    ||||||||||||||||||||||||| | ||||||||  |||| |||||||||||||||||||||||||||||||||||||||||| || ||||| |||||    
T  1842898 tgagggaaatttagtgagggaaaacgtaaaatccctccctaattccgtcactaaattttgcgaccaaggaatttgtgaggaatttcattttttccgtcac 1842997  T
Q  510 naattnccctccctaattttgcnttt 535  Q
     |||| |||||  ||||||||| |||    
T  1842998 taatttccctcgttaattttgctttt 1843023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 406 - 535
Target Start/End: Original strand, 11036507 - 11036636
Alignment:
Q  406 ttagtgagggaaatttagtgagggaaaacatgaaatccctttctaantccgtcactaaattttgcgaccaaggaatttgtgaggaattttatgttttctg 505  Q
    |||||||||||||||| |||||||||||| |||||||||| ||||| ||||||||||||||||||||||| | |||||||||||||||| || ||||| |    
T  11036507 ttagtgagggaaattttgtgagggaaaacgtgaaatccctctctaattccgtcactaaattttgcgaccatgaaatttgtgaggaatttcattttttccg 11036606  T
Q  506 tcacnaattnccctccctaattttgcnttt 535  Q
    |||| |||| ||||  |||||||||| |||    
T  11036607 tcactaatttcccttgctaattttgctttt 11036636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 400 - 537
Target Start/End: Original strand, 24140444 - 24140581
Alignment:
Q  400 caaaagttagtgagggaaatttagtgagggaaaacatgaaatccctttctaantccgtcactaaattttgcgaccaaggaatttgtgaggaattttatgt 499  Q
    ||||| ||||||||||||||||||||||||||||||| |||||| | || || ||||||| |||||||| ||||||| |||||||||||||||||||| |    
T  24140444 caaaaattagtgagggaaatttagtgagggaaaacataaaatccttctccaattccgtcattaaattttacgaccaaagaatttgtgaggaattttatat 24140543  T
Q  500 tttctgtcacnaattnccctccctaattttgcntttcc 537  Q
    |||| ||||| ||||  ||||||||||||| | |||||    
T  24140544 tttccgtcacaaattttcctccctaattttacttttcc 24140581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 400 - 530
Target Start/End: Complemental strand, 37135430 - 37135300
Alignment:
Q  400 caaaagttagtgagggaaatttagtgagggaaaacatgaaatccctttctaantccgtcactaaattttgcgaccaaggaatttgtgaggaattttatgt 499  Q
    ||||| |||||||||||||||| |||||||||||| |||||||||| ||||| |||||||||||||||| |||||| ||||||| |||||||||| || |    
T  37135430 caaaaattagtgagggaaattttgtgagggaaaacgtgaaatccctctctaattccgtcactaaattttacgaccatggaatttatgaggaatttcattt 37135331  T
Q  500 tttctgtcacnaattnccctccctaattttg 530  Q
    |||| ||||| |||| ||||| |||||||||    
T  37135330 tttccgtcactaatttccctcactaattttg 37135300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 400 - 514
Target Start/End: Complemental strand, 10050981 - 10050867
Alignment:
Q  400 caaaagttagtgagggaaatttagtgagggaaaacatgaaatccctttctaantccgtcactaaattttgcgaccaaggaatttgtgaggaattttatgt 499  Q
    ||||| ||||||||||||||||||||||||||||| | |||||||| ||||| |||||||||||||||||||||||||||||||||||| ||||| || |    
T  10050981 caaaaattagtgagggaaatttagtgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaaggaatttgtgagaaatttcattt 10050882  T
Q  500 tttctgtcacnaatt 514  Q
    |||| ||||| ||||    
T  10050881 tttccgtcactaatt 10050867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 400 - 529
Target Start/End: Original strand, 24605832 - 24605961
Alignment:
Q  400 caaaagttagtgagggaaatttagtgagggaaaacatgaaatccctttctaantccgtcactaaattttgcgaccaaggaatttgtgaggaattttatgt 499  Q
    ||||| ||||||||| ||||||||||||||||||| ||||||| || ||||| |||||||||||||||||||||||| ||||||||||||||||| || |    
T  24605832 caaaaattagtgaggaaaatttagtgagggaaaacgtgaaatctctctctaattccgtcactaaattttgcgaccaaagaatttgtgaggaatttcattt 24605931  T
Q  500 tttctgtcacnaattnccctccctaatttt 529  Q
    |||| ||||| |||| ||||| || |||||    
T  24605932 tttccgtcactaatttccctcgctgatttt 24605961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 76; E-Value: 7e-35
Query Start/End: Original strand, 406 - 530
Target Start/End: Complemental strand, 23750875 - 23750751
Alignment:
Q  406 ttagtgagggaaatttagtgagggaaaacatgaaatccctttctaantccgtcactaaattttgcgaccaaggaatttgtgaggaattttatgttttctg 505  Q
    ||||||||||||||||||||||||||||  | |||||||| ||||| |||||||||||||||| ||||||||||||||||||| ||||| || ||||| |    
T  23750875 ttagtgagggaaatttagtgagggaaaatgtaaaatccctctctaattccgtcactaaattttacgaccaaggaatttgtgagaaatttcattttttccg 23750776  T
Q  506 tcacnaattnccctccctaattttg 530  Q
    |||| |||| ||||| |||||||||    
T  23750775 tcactaatttccctcgctaattttg 23750751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 76; E-Value: 7e-35
Query Start/End: Original strand, 400 - 535
Target Start/End: Original strand, 48933130 - 48933265
Alignment:
Q  400 caaaagttagtgagggaaatttagtgagggaaaacatgaaatccctttctaantccgtcactaaattttgcgaccaaggaatttgtgaggaattttatgt 499  Q
    ||||| |||||||||||||||| |||||  ||||| |||||| ||| ||||| ||||||||||||||||||||||| ||||||||||||||||||||| |    
T  48933130 caaaaattagtgagggaaattttgtgagaaaaaacgtgaaattcctctctaattccgtcactaaattttgcgaccatggaatttgtgaggaattttattt 48933229  T
Q  500 tttctgtcacnaattnccctccctaattttgcnttt 535  Q
    |||| ||||| ||||  |||| |||||||||| |||    
T  48933230 tttccgtcactaattttcctcgctaattttgctttt 48933265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 406 - 514
Target Start/End: Original strand, 45664768 - 45664876
Alignment:
Q  406 ttagtgagggaaatttagtgagggaaaacatgaaatccctttctaantccgtcactaaattttgcgaccaaggaatttgtgaggaattttatgttttctg 505  Q
    |||||||||||||| |||||||||||||| | |||||||| ||||| |||||||||||||||||||| ||||||||||||||||||||| || |||||||    
T  45664768 ttagtgagggaaatatagtgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgatcaaggaatttgtgaggaatttcattttttctg 45664867  T
Q  506 tcacnaatt 514  Q
    |||| ||||    
T  45664868 tcactaatt 45664876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 400 - 535
Target Start/End: Original strand, 20429459 - 20429594
Alignment:
Q  400 caaaagttagtgagggaaatttagtgagggaaaacatgaaatccctttctaantccgtcactaaattttgcgaccaaggaatttgtgaggaattttatgt 499  Q
    ||||| |||||||||||||||| |||||||||||| |||||||||| ||||| |||||||||||||||| |||||| | |||||||||||||||| || |    
T  20429459 caaaaattagtgagggaaattttgtgagggaaaacgtgaaatccctctctaattccgtcactaaattttacgaccatgaaatttgtgaggaatttcattt 20429558  T
Q  500 tttctgtcacnaattnccctccctaattttgcnttt 535  Q
    |||| ||||| |||| ||||   ||||||||| |||    
T  20429559 tttccgtcactaatttcccttgttaattttgctttt 20429594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 400 - 530
Target Start/End: Complemental strand, 816336 - 816206
Alignment:
Q  400 caaaagttagtgagggaaatttagtgagggaaaacatgaaatccctttctaantccgtcactaaattttgcgaccaaggaatttgtgaggaattttatgt 499  Q
    ||||| ||||||||| |||||||| || ||||||| |||||||||| ||||| |||||||||||||||||||||||| |||||||||||  ||||| | |    
T  816336 caaaaattagtgaggaaaatttagagatggaaaacgtgaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgagagattttgttt 816237  T
Q  500 tttctgtcacnaattnccctccctaattttg 530  Q
    |||| ||||| |||| |||||||||| ||||    
T  816236 tttccgtcactaatttccctccctaaatttg 816206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 406 - 535
Target Start/End: Complemental strand, 6849350 - 6849221
Alignment:
Q  406 ttagtgagggaaatttagtgagggaaaacatgaaatccctttctaantccgtcactaaattttgcgaccaaggaatttgtgaggaattttatgttttctg 505  Q
    |||| |||||||||||||||||| ||||| | ||||| || ||||| ||||||||||||||||||||| |||||||||||||||||||| || || || |    
T  6849350 ttagcgagggaaatttagtgaggtaaaacgtaaaatctctctctaattccgtcactaaattttgcgactaaggaatttgtgaggaatttcattttctccg 6849251  T
Q  506 tcacnaattnccctccctaattttgcnttt 535  Q
    |||| |||| ||||| |||||||||| |||    
T  6849250 tcactaatttccctcgctaattttgctttt 6849221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 406 - 535
Target Start/End: Complemental strand, 9698677 - 9698548
Alignment:
Q  406 ttagtgagggaaatttagtgagggaaaacatgaaatccctttctaantccgtcactaaattttgcgaccaaggaatttgtgaggaattttatgttttctg 505  Q
    ||||||||||||||||||||||||||||| | |||| ||| ||||| ||||||||||||||||  ||||||||||||||||| |||||| ||  |||| |    
T  9698677 ttagtgagggaaatttagtgagggaaaacgtaaaattcctctctaattccgtcactaaattttatgaccaaggaatttgtgatgaatttcattatttccg 9698578  T
Q  506 tcacnaattnccctccctaattttgcnttt 535  Q
    |||| |||| ||||| |||||||||| |||    
T  9698577 tcactaatttccctcgctaattttgctttt 9698548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 400 - 529
Target Start/End: Complemental strand, 42926565 - 42926435
Alignment:
Q  400 caaaagttagtgagggaaatttagtgagggaaaacatgaaatccctttctaantccgtcactaaattttgcgaccaaggaatttgtgaggaatttta-tg 498  Q
    ||||| ||||||||||| ||||||||||| |||||||||||||||| ||||| ||||||||||||||||||||| ||| |||||||||||||||| | |     
T  42926565 caaaaattagtgagggatatttagtgaggaaaaacatgaaatccctctctaattccgtcactaaattttgcgactaagaaatttgtgaggaatttcattt 42926466  T
Q  499 ttttctgtcacnaattnccctccctaatttt 529  Q
    ||||| ||||| ||||  |||| ||||||||    
T  42926465 ttttccgtcactaattttcctcgctaatttt 42926435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 400 - 503
Target Start/End: Original strand, 31042245 - 31042348
Alignment:
Q  400 caaaagttagtgagggaaatttagtgagggaaaacatgaaatccctttctaantccgtcactaaattttgcgaccaaggaatttgtgaggaattttatgt 499  Q
    ||||| |||||||||||| ||||| |||||||||| |||||||||| ||||| || ||||||||||||||||||||||||||||||||| |||||||| |    
T  31042245 caaaaattagtgagggaattttagagagggaaaacgtgaaatccctctctaattctgtcactaaattttgcgaccaaggaatttgtgagaaattttattt 31042344  T
Q  500 tttc 503  Q
    ||||    
T  31042345 tttc 31042348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 400 - 503
Target Start/End: Original strand, 38057626 - 38057729
Alignment:
Q  400 caaaagttagtgagggaaatttagtgagggaaaacatgaaatccctttctaantccgtcactaaattttgcgaccaaggaatttgtgaggaattttatgt 499  Q
    ||||| ||| |||||||||||||| |||||||||| |||||||||| | ||| |||||||||||| |||||||||||||||||||||||||||||||| |    
T  38057626 caaaaattaatgagggaaatttagcgagggaaaacgtgaaatccctctttaattccgtcactaaactttgcgaccaaggaatttgtgaggaattttattt 38057725  T
Q  500 tttc 503  Q
    ||||    
T  38057726 tttc 38057729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 420 - 535
Target Start/End: Complemental strand, 3872312 - 3872197
Alignment:
Q  420 ttagtgagggaaaacatgaaatccctttctaantccgtcactaaattttgcgaccaaggaatttgtgaggaattttatgttttctgtcacnaattnccct 519  Q
    ||||||||||||||| | ||||| || ||||| ||||||||||||||||| |||||||||||||||||||||||| || ||||| ||||| |||| ||||    
T  3872312 ttagtgagggaaaacgtaaaatctctctctaattccgtcactaaattttgagaccaaggaatttgtgaggaatttcattttttccgtcactaatttccct 3872213  T
Q  520 ccctaattttgcnttt 535  Q
    | |||||||||| |||    
T  3872212 cgctaattttgctttt 3872197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 420 - 535
Target Start/End: Complemental strand, 3904603 - 3904488
Alignment:
Q  420 ttagtgagggaaaacatgaaatccctttctaantccgtcactaaattttgcgaccaaggaatttgtgaggaattttatgttttctgtcacnaattnccct 519  Q
    ||||||||||||||| | |||||||| ||||| ||||||||||||||||||||||||| |||||| ||||||||| || ||||| ||||| |||| ||||    
T  3904603 ttagtgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaagaaatttgcgaggaatttcattttttccgtcactaatttccct 3904504  T
Q  520 ccctaattttgcnttt 535  Q
    | |||||||||| |||    
T  3904503 cgctaattttgctttt 3904488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 419 - 535
Target Start/End: Original strand, 11852021 - 11852137
Alignment:
Q  419 tttagtgagggaaaacatgaaatccctttctaantccgtcactaaattttgcgaccaaggaatttgtgaggaattttatgttttctgtcacnaattnccc 518  Q
    ||||| |||||||||| |||||||| | ||||| ||||||||||||||||| |||||| |||||||||||  ||||||| ||||||||||| |||| | |    
T  11852021 tttagagagggaaaacctgaaatccttctctaattccgtcactaaattttgtgaccaaagaatttgtgagacattttattttttctgtcacaaatttctc 11852120  T
Q  519 tccctaattttgcnttt 535  Q
    ||||||||||||| |||    
T  11852121 tccctaattttgctttt 11852137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 400 - 529
Target Start/End: Complemental strand, 20924103 - 20923974
Alignment:
Q  400 caaaagttagtgagggaaatttagtgagggaaaacatgaaatccctttctaantccgtcactaaattttgcgaccaaggaatttgtgaggaattttatgt 499  Q
    ||||| ||||||| |||||||||||||||||||||||||||||||| ||||| || |||||||||||||| ||||||  ||||||| ||  ||||||| |    
T  20924103 caaaaattagtgatggaaatttagtgagggaaaacatgaaatccctctctaattctgtcactaaattttgtgaccaacaaatttgtaagagattttattt 20924004  T
Q  500 tttctgtcacnaattnccctccctaatttt 529  Q
    ||||  |||| |||| |||||| |||||||    
T  20924003 tttccatcactaatttccctccataatttt 20923974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 400 - 529
Target Start/End: Complemental strand, 23699970 - 23699841
Alignment:
Q  400 caaaagttagtgagggaaatttagtgagggaaaacatgaaatccctttctaantccgtcactaaattttgcgaccaaggaatttgtgaggaattttatgt 499  Q
    ||||| |||||||| ||||||| |||||||||||  |||||||||| | ||| || |||||||||||||||||||| | |||||||||||||||| || |    
T  23699970 caaaaattagtgagagaaattttgtgagggaaaatgtgaaatccctctttaattctgtcactaaattttgcgaccatgaaatttgtgaggaatttcattt 23699871  T
Q  500 tttctgtcacnaattnccctccctaatttt 529  Q
    |||| ||||| |||| ||||| ||||||||    
T  23699870 tttccgtcactaatttccctcgctaatttt 23699841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 416 - 520
Target Start/End: Original strand, 21623031 - 21623135
Alignment:
Q  416 aaatttagtgagggaaaacatgaaatccctttctaantccgtcactaaattttgcgaccaaggaatttgtgaggaattttatgttttctgtcacnaattn 515  Q
    ||||||||||||||||||| | |||||||| ||||| ||| ||||||||||||||| |||||||||||||||||||||| || ||||| ||||| ||||     
T  21623031 aaatttagtgagggaaaacgtaaaatccctctctaattccatcactaaattttgcgcccaaggaatttgtgaggaatttcattttttccgtcactaattt 21623130  T
Q  516 ccctc 520  Q
    |||||    
T  21623131 ccctc 21623135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 400 - 535
Target Start/End: Original strand, 22501588 - 22501723
Alignment:
Q  400 caaaagttagtgagggaaatttagtgagggaaaacatgaaatccctttctaantccgtcactaaattttgcgaccaaggaatttgtgaggaattttatgt 499  Q
    ||||| |||||||||||||||||| |||||||||| |||||||||| ||||| ||||||| ||||||||||| |||| ||||||||||   ||||||| |    
T  22501588 caaaaattagtgagggaaatttagagagggaaaacgtgaaatccctctctaattccgtcattaaattttgcggccaaagaatttgtgaaagattttattt 22501687  T
Q  500 tttctgtcacnaattnccctccctaattttgcnttt 535  Q
    |||| ||||| ||||  | ||| ||||||||| |||    
T  22501688 tttccgtcactaattttcatccttaattttgccttt 22501723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 406 - 530
Target Start/End: Original strand, 27304872 - 27304994
Alignment:
Q  406 ttagtgagggaaatttagtgagggaaaacatgaaatccctttctaantccgtcactaaattttgcgaccaaggaatttgtgaggaattttatgttttctg 505  Q
    ||||| |||||||||| |||| ||||| | ||| |||||| ||||| ||||||||||||||||||| |||||||||||||| || ||||||| |||||||    
T  27304872 ttagtcagggaaattt-gtgaaggaaa-cgtgacatccctctctaattccgtcactaaattttgcggccaaggaatttgtgggggattttattttttctg 27304969  T
Q  506 tcacnaattnccctccctaattttg 530  Q
    |||| |||| |||||||||||||||    
T  27304970 tcactaatttccctccctaattttg 27304994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 409 - 535
Target Start/End: Original strand, 32267350 - 32267475
Alignment:
Q  409 gtgagggaaatttagtgagggaaaacatgaaatccctttctaantccgtcactaaattttgcgaccaaggaatttgtgaggaattttatgttttctgtca 508  Q
    ||||||||||||||| ||||||||||   |||||||| ||||| || ||||||||||||||||| |||| ||||||||||| ||||||| ||||| ||||    
T  32267350 gtgagggaaatttagagagggaaaacgcaaaatccctctctaattctgtcactaaattttgcgatcaagaaatttgtgagggattttat-ttttccgtca 32267448  T
Q  509 cnaattnccctccctaattttgcnttt 535  Q
    | |||  |||||||||||||||| |||    
T  32267449 ctaatctccctccctaattttgcattt 32267475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 412 - 530
Target Start/End: Complemental strand, 14786768 - 14786650
Alignment:
Q  412 agggaaatttagtgagggaaaacatgaaatccctttctaantccgtcactaaattttgcgaccaaggaatttgtgaggaattttatgttttctgtcacna 511  Q
    |||||||||||  |||||||||| | |||| ||||| ||| ||||||||||||||||||||||||  |||||||||||||||| || ||||||||||| |    
T  14786768 agggaaatttaacgagggaaaacgtaaaattcctttttaattccgtcactaaattttgcgaccaaaaaatttgtgaggaatttcattttttctgtcacta 14786669  T
Q  512 attnccctccctaattttg 530  Q
    |||  |||| |||||||||    
T  14786668 attttcctcactaattttg 14786650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 422 - 535
Target Start/End: Original strand, 23539248 - 23539361
Alignment:
Q  422 agtgagggaaaacatgaaatccctttctaantccgtcactaaattttgcgaccaaggaatttgtgaggaattttatgttttctgtcacnaattnccctcc 521  Q
    |||||||||| || |||||||||| ||||| ||||||| ||||||||||||| | |||||||||||||||||| || ||||| ||||| |||| |||||     
T  23539248 agtgagggaatacgtgaaatccctctctaattccgtcattaaattttgcgactatggaatttgtgaggaatttcattttttccgtcactaatttccctcg 23539347  T
Q  522 ctaattttgcnttt 535  Q
    |||||||||| |||    
T  23539348 ctaattttgctttt 23539361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 420 - 530
Target Start/End: Original strand, 33427704 - 33427813
Alignment:
Q  420 ttagtgagggaaaacatgaaatccctttctaantccgtcactaaattttgcgaccaaggaatttgtgaggaattttatgttttctgtcacnaattnccct 519  Q
    |||||||||||||||||||||| ||| ||||| |||||||||||||||| ||||||| ||||||||||||||||| || ||||  ||||| |||| ||||    
T  33427704 ttagtgagggaaaacatgaaattcctctctaattccgtcactaaattttacgaccaaagaatttgtgaggaatttcat-tttttggtcactaatttccct 33427802  T
Q  520 ccctaattttg 530  Q
    | |||||||||    
T  33427803 cgctaattttg 33427813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 400 - 514
Target Start/End: Complemental strand, 11890292 - 11890178
Alignment:
Q  400 caaaagttagtgagggaaatttagtgagggaaaacatgaaatccctttctaantccgtcactaaattttgcgaccaaggaatttgtgaggaattttatgt 499  Q
    ||||||||||||||| |||||||||||||||||| |||| ||||||  |||| | ||||||||||||||| |||||| |||||| ||||| ||||||| |    
T  11890292 caaaagttagtgaggaaaatttagtgagggaaaatatgatatccctcgctaacttcgtcactaaattttgagaccaaagaatttatgagggattttattt 11890193  T
Q  500 tttctgtcacnaatt 514  Q
    |||| ||||| ||||    
T  11890192 tttccgtcactaatt 11890178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 424 - 529
Target Start/End: Complemental strand, 2650949 - 2650844
Alignment:
Q  424 tgagggaaaacatgaaatccctttctaantccgtcactaaattttgcgaccaaggaatttgtgaggaattttatgttttctgtcacnaattnccctccct 523  Q
    ||||||||||| | |||||||| ||||| ||||||||||||||||||||||| | |||||||||||||||| || ||||| ||||| || | ||||| ||    
T  2650949 tgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccatgaaatttgtgaggaatttcattttttccgtcactaaattccctcact 2650850  T
Q  524 aatttt 529  Q
    ||||||    
T  2650849 aatttt 2650844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 418 - 494
Target Start/End: Original strand, 15969796 - 15969872
Alignment:
Q  418 atttagtgagggaaaacatgaaatccctttctaantccgtcactaaattttgcgaccaaggaatttgtgaggaattt 494  Q
    |||||||||||||||||||||||| ||| ||||| |||||||||||||||| ||||||| ||||||||||| |||||    
T  15969796 atttagtgagggaaaacatgaaattcctctctaattccgtcactaaattttacgaccaaagaatttgtgagaaattt 15969872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 400 - 530
Target Start/End: Original strand, 21871566 - 21871692
Alignment:
Q  400 caaaagttagtgagggaaatttagtgagggaaaacatgaaatccctttctaantccgtcactaaattttgcgaccaaggaatttgtgaggaattttatgt 499  Q
    ||||| ||||||||| ||||||||||||||||||  | |||||    ||||| ||||||||||||||||||||||||| |||||||||||||||| || |    
T  21871566 caaaaattagtgaggaaaatttagtgagggaaaatgtaaaatc----tctaattccgtcactaaattttgcgaccaagaaatttgtgaggaatttcattt 21871661  T
Q  500 tttctgtcacnaattnccctccctaattttg 530  Q
    |||| | |||  |||  |||| |||||||||    
T  21871662 tttccgccactgattttcctcgctaattttg 21871692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 420 - 536
Target Start/End: Complemental strand, 1822118 - 1822005
Alignment:
Q  420 ttagtgagggaaaacatgaaatccctttctaantccgtcactaaattttgcgaccaaggaatttgtgaggaattttatgttttctgtcacnaattnccct 519  Q
    ||||||||| ||||||||||||| || ||||| ||| ||| ||||||||  || | |||||||||||||||||||||| ||||| ||||| ||||   ||    
T  1822118 ttagtgaggaaaaacatgaaatctctctctaattccttcagtaaattttaagatcgaggaatttgtgaggaattttatattttccgtcactaatt---ct 1822022  T
Q  520 ccctaattttgcntttc 536  Q
    |||||||||||| ||||    
T  1822021 ccctaattttgcttttc 1822005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 400 - 529
Target Start/End: Complemental strand, 25777257 - 25777128
Alignment:
Q  400 caaaagttagtgagggaaatttagtgagggaaaacatgaaatccctttctaantccgtcactaaattttgcgaccaaggaatttgtgaggaattttatgt 499  Q
    ||||| ||| |||||||||||||| |||||||||| ||||||| || ||||| | | |||||||||||| ||| |||  ||||||||||| ||||||| |    
T  25777257 caaaatttaatgagggaaatttagagagggaaaacgtgaaatcactctctaatttcatcactaaattttacgatcaaaaaatttgtgagggattttattt 25777158  T
Q  500 tttctgtcacnaattnccctccctaatttt 529  Q
    | |  ||||| ||||  | |||||||||||    
T  25777157 tattggtcactaattttcttccctaatttt 25777128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 400 - 529
Target Start/End: Original strand, 26415418 - 26415547
Alignment:
Q  400 caaaagttagtgagggaaatttagtgagggaaaacatgaaatccctttctaantccgtcactaaattttgcgaccaaggaatttgtgaggaattttatgt 499  Q
    ||||| |||||||||||| ||||| |||| ||||| | |||||||| | ||| | |||||||||||||| ||| |||  |||||||||| |||||||| |    
T  26415418 caaaaattagtgagggaattttagagaggaaaaacgtaaaatccctctttaatttcgtcactaaattttacgatcaaaaaatttgtgagaaattttattt 26415517  T
Q  500 tttctgtcacnaattnccctccctaatttt 529  Q
    ||||  |||| |||| || || ||||||||    
T  26415518 tttccatcactaatttccttctctaatttt 26415547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 401 - 503
Target Start/End: Original strand, 27130329 - 27130429
Alignment:
Q  401 aaaagttagtgagggaaatttagtgagggaaaacatgaaatccctttctaantccgtcactaaattttgcgaccaaggaatttgtgaggaattttatgtt 500  Q
    |||| ||| |||||||||||||| |||||||||  ||||||||||  |||| ||||||||||| ||||||||  || |||||||||||| ||||||| ||    
T  27130329 aaaaattaatgagggaaatttagagagggaaaatgtgaaatccct--ctaattccgtcactaacttttgcgattaacgaatttgtgaggcattttatatt 27130426  T
Q  501 ttc 503  Q
    |||    
T  27130427 ttc 27130429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 401 - 494
Target Start/End: Complemental strand, 15330349 - 15330256
Alignment:
Q  401 aaaagttagtgagggaaatttagtgagggaaaacatgaaatccctttctaantccgtcactaaattttgcgaccaaggaatttgtgaggaattt 494  Q
    |||| ||| ||||||| ||||||| ||| ||||| ||||||  || ||||| || |||||||||||||||||||||| |||||||||| |||||    
T  15330349 aaaaattaatgagggatatttagtaaggaaaaacttgaaatttctctctaattctgtcactaaattttgcgaccaagaaatttgtgagaaattt 15330256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 400 - 483
Target Start/End: Original strand, 687871 - 687954
Alignment:
Q  400 caaaagttagtgagggaaatttagtgagggaaaacatgaaatccctttctaantccgtcactaaattttgcgaccaaggaattt 483  Q
    ||||| |||||||| |||||||||||||||||||  | |||||| | ||||| || ||||||||| |||||||| |||||||||    
T  687871 caaaaattagtgagagaaatttagtgagggaaaatgtaaaatccttctctaattctgtcactaaactttgcgacaaaggaattt 687954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 438 - 536
Target Start/End: Complemental strand, 1841889 - 1841792
Alignment:
Q  438 aaatccctttctaantccgtcactaaattttgcgaccaaggaatttgtgaggaattttatgttttctgtcacnaattnccctccctaattttgcntttc 536  Q
    |||||||| ||||| ||| ||| |||||||||| | |||||||||||||||| ||||||| |||||| | || |||| | || ||||||||||| ||||    
T  1841889 aaatccctctctaattccttcagtaaattttgcaatcaaggaatttgtgagggattttattttttct-taactaatttctcttcctaattttgcttttc 1841792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #61
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 401 - 527
Target Start/End: Complemental strand, 10222773 - 10222648
Alignment:
Q  401 aaaagttagtgagggaaatttagtgagggaaaacatgaaatccctttctaantccgtcactaaattttgcgaccaaggaatttgtgaggaattttatgtt 500  Q
    |||| ||||||||  |||||||| ||  |||||| | |||||||| ||||| || |||| |||||||||||| |||  ||||| |||| |||||||  ||    
T  10222773 aaaaattagtgagaaaaatttagagaaagaaaacgtaaaatccctctctaattctgtcattaaattttgcgatcaa-aaatttatgagaaattttacttt 10222675  T
Q  501 ttctgtcacnaattnccctccctaatt 527  Q
    ||||||||| ||||  |||||||||||    
T  10222674 ttctgtcactaattttcctccctaatt 10222648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #62
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 420 - 529
Target Start/End: Complemental strand, 2093487 - 2093378
Alignment:
Q  420 ttagtgagggaaaacatgaaatccctttctaantccgtcactaaattttgcgaccaaggaatttgtgaggaattttatgttttctgtcacnaattnccct 519  Q
    ||||||||||||||| | ||||| || ||||| |||||||||||||||| ||| |||    ||| |||||||||| || ||||| ||||| |||| ||||    
T  2093487 ttagtgagggaaaacgtcaaatctctctctaattccgtcactaaatttttcgatcaaattttttttgaggaatttcattttttccgtcactaatttccct 2093388  T
Q  520 ccctaatttt 529  Q
    | || |||||    
T  2093387 cgctgatttt 2093378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #63
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 400 - 529
Target Start/End: Complemental strand, 27132866 - 27132737
Alignment:
Q  400 caaaagttagtgagggaaatttagtgagggaaaacatgaaatccctttctaantccgtcactaaattttgcgaccaaggaatttgtgaggaattttatgt 499  Q
    ||||| |||||||||||||||  | |||| |||||  |||||  || ||||| || ||||||||||||||| || ||  ||||||||| | ||||||| |    
T  27132866 caaaaattagtgagggaaattgtgagaggaaaaacgcgaaatatctctctaattctgtcactaaattttgcaacaaacaaatttgtgatggattttattt 27132767  T
Q  500 tttctgtcacnaattnccctccctaatttt 529  Q
    |||| || || |||| ||||| ||||||||    
T  27132766 tttccgttaccaatttccctctctaatttt 27132737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #64
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 479 - 531
Target Start/End: Original strand, 38090336 - 38090388
Alignment:
Q  479 aatttgtgaggaattttatgttttctgtcacnaattnccctccctaattttgc 531  Q
    ||||||||||| ||||||| ||||| ||||| |||| ||||||||||||||||    
T  38090336 aatttgtgagggattttattttttccgtcacaaatttccctccctaattttgc 38090388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 108; Significance: 5e-54; HSPs: 55)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 108; E-Value: 5e-54
Query Start/End: Original strand, 400 - 535
Target Start/End: Original strand, 41637608 - 41637743
Alignment:
Q  400 caaaagttagtgagggaaatttagtgagggaaaacatgaaatccctttctaantccgtcactaaattttgcgaccaaggaatttgtgaggaattttatgt 499  Q
    ||||| ||||||||| |||||||||||||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  41637608 caaaaattagtgaggaaaatttagtgagggaaaacatgaaatccctctctaattccgtcactaaattttgcgaccaaggaatttgtgaggaattttatgt 41637707  T
Q  500 tttctgtcacnaattnccctccctaattttgcnttt 535  Q
    |||| ||||| |||| |||||||||||||||| |||    
T  41637708 tttccgtcacaaatttccctccctaattttgctttt 41637743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 106; E-Value: 8e-53
Query Start/End: Original strand, 400 - 537
Target Start/End: Original strand, 30783328 - 30783465
Alignment:
Q  400 caaaagttagtgagggaaatttagtgagggaaaacatgaaatccctttctaantccgtcactaaattttgcgaccaaggaatttgtgaggaattttatgt 499  Q
    ||||| |||||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||||||||||||| ||||||||||||||||||||||    
T  30783328 caaaaattagtgagggaaatttagtgagggaaaacatgaaatccctctctaattccgtcactaaattttgcgaccaatgaatttgtgaggaattttatgt 30783427  T
Q  500 tttctgtcacnaattnccctccctaattttgcntttcc 537  Q
    |||| ||||| |||| |||| ||||||||||| |||||    
T  30783428 tttccgtcacaaatttcccttcctaattttgcttttcc 30783465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 98; E-Value: 5e-48
Query Start/End: Original strand, 400 - 537
Target Start/End: Original strand, 31266344 - 31266481
Alignment:
Q  400 caaaagttagtgagggaaatttagtgagggaaaacatgaaatccctttctaantccgtcactaaattttgcgaccaaggaatttgtgaggaattttatgt 499  Q
    ||||| |||||||||||||||||| ||||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  31266344 caaaaattagtgagggaaatttagcgagggaaaacatgaaatccctctctaattccgtcactaaattttgcgaccaaggaatttgtgaggaattttatgt 31266443  T
Q  500 tttctgtcacnaattnccctccctaattttgcntttcc 537  Q
    |||| || |  |||| |||||||||||||| | |||||    
T  31266444 tttccgtaaaaaatttccctccctaattttacttttcc 31266481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 96; E-Value: 8e-47
Query Start/End: Original strand, 400 - 535
Target Start/End: Complemental strand, 29749548 - 29749413
Alignment:
Q  400 caaaagttagtgagggaaatttagtgagggaaaacatgaaatccctttctaantccgtcactaaattttgcgaccaaggaatttgtgaggaattttatgt 499  Q
    ||||| ||||||||| ||||||||||||||||||||||||||||||  |||| ||||||||||||||||||||||||| |||||||||||||||||||||    
T  29749548 caaaaattagtgaggaaaatttagtgagggaaaacatgaaatccctccctaattccgtcactaaattttgcgaccaagaaatttgtgaggaattttatgt 29749449  T
Q  500 tttctgtcacnaattnccctccctaattttgcnttt 535  Q
    |||| ||||| |||| |||| ||||||||||| |||    
T  29749448 tttccgtcacaaatttcccttcctaattttgctttt 29749413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 400 - 537
Target Start/End: Original strand, 27327606 - 27327743
Alignment:
Q  400 caaaagttagtgagggaaatttagtgagggaaaacatgaaatccctttctaantccgtcactaaattttgcgaccaaggaatttgtgaggaattttatgt 499  Q
    ||||| ||| |||||||||||||||||||||||||||||||||||| | ||| ||||||||||||||||||| | |||||||||||||||||||||||||    
T  27327606 caaaaattaatgagggaaatttagtgagggaaaacatgaaatccctctttaattccgtcactaaattttgcgtctaaggaatttgtgaggaattttatgt 27327705  T
Q  500 tttctgtcacnaattnccctccctaattttgcntttcc 537  Q
    |||| ||||| |||| || ||||||||||||| |||||    
T  27327706 tttccgtcacaaatttccatccctaattttgcttttcc 27327743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 400 - 537
Target Start/End: Complemental strand, 28841487 - 28841350
Alignment:
Q  400 caaaagttagtgagggaaatttagtgagggaaaacatgaaatccctttctaantccgtcactaaattttgcgaccaaggaatttgtgaggaattttatgt 499  Q
    ||||| ||||||||||| |||||||| ||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||| || |    
T  28841487 caaaaattagtgagggatatttagtgtgggaaaacatgaaatccctctctaattccgtcactaaattttgcgaccaaggaatttgtgaggaatttcattt 28841388  T
Q  500 tttctgtcacnaattnccctccctaattttgcntttcc 537  Q
    |||| || || |||| ||||| |||||||||| |||||    
T  28841387 tttccgttactaatttccctcgctaattttgcttttcc 28841350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 88; E-Value: 5e-42
Query Start/End: Original strand, 400 - 535
Target Start/End: Original strand, 32300441 - 32300576
Alignment:
Q  400 caaaagttagtgagggaaatttagtgagggaaaacatgaaatccctttctaantccgtcactaaattttgcgaccaaggaatttgtgaggaattttatgt 499  Q
    ||||| |||||||||||||||| |||||||||||| |||||||||| ||||| ||||||||||||||||||||||| |||||||||||||||||| || |    
T  32300441 caaaaattagtgagggaaattttgtgagggaaaacgtgaaatccctctctaattccgtcactaaattttgcgaccatggaatttgtgaggaatttcattt 32300540  T
Q  500 tttctgtcacnaattnccctccctaattttgcnttt 535  Q
    |||| ||||| |||| ||||| |||||||||| |||    
T  32300541 tttccgtcactaatttccctcgctaattttgctttt 32300576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 81; E-Value: 7e-38
Query Start/End: Original strand, 411 - 535
Target Start/End: Complemental strand, 28319713 - 28319589
Alignment:
Q  411 gagggaaatttagtgagggaaaacatgaaatccctttctaantccgtcactaaattttgcgaccaaggaatttgtgaggaattttatgttttctgtcacn 510  Q
    ||||||||||| |||||||||||| |||||||||| ||||| ||||||||||||||||||||||| |||||||||||||||||| || ||||| |||||     
T  28319713 gagggaaattttgtgagggaaaacgtgaaatccctctctaattccgtcactaaattttgcgaccatggaatttgtgaggaatttcattttttccgtcact 28319614  T
Q  511 aattnccctccctaattttgcnttt 535  Q
    |||| ||||| |||||||||| |||    
T  28319613 aatttccctcactaattttgctttt 28319589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 400 - 535
Target Start/End: Original strand, 1141526 - 1141661
Alignment:
Q  400 caaaagttagtgagggaaatttagtgagggaaaacatgaaatccctttctaantccgtcactaaattttgcgaccaaggaatttgtgaggaattttatgt 499  Q
    ||||| |||||||||||||||| |||||||||||| |||||||||| ||||| || |||||||||||||||||||| | |||||||||||||||| || |    
T  1141526 caaaaattagtgagggaaattttgtgagggaaaacgtgaaatccctctctaattctgtcactaaattttgcgaccatgaaatttgtgaggaatttcattt 1141625  T
Q  500 tttctgtcacnaattnccctccctaattttgcnttt 535  Q
    |||| ||||| |||| ||||| |||||||||| |||    
T  1141626 tttccgtcactaatttccctcgctaattttgctttt 1141661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 400 - 535
Target Start/End: Complemental strand, 15636880 - 15636745
Alignment:
Q  400 caaaagttagtgagggaaatttagtgagggaaaacatgaaatccctttctaantccgtcactaaattttgcgaccaaggaatttgtgaggaattttatgt 499  Q
    ||||| |||||||||||||||| |||||||||||| |||||||||| ||||| | ||||||||||||||||||||| | |||||||||||||||| || |    
T  15636880 caaaaattagtgagggaaattttgtgagggaaaacgtgaaatccctctctaatttcgtcactaaattttgcgaccatgaaatttgtgaggaatttcattt 15636781  T
Q  500 tttctgtcacnaattnccctccctaattttgcnttt 535  Q
    |||| ||||| |||| ||||| |||||||||| |||    
T  15636780 tttccgtcactaatttccctcgctaattttgctttt 15636745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 400 - 535
Target Start/End: Complemental strand, 18551398 - 18551263
Alignment:
Q  400 caaaagttagtgagggaaatttagtgagggaaaacatgaaatccctttctaantccgtcactaaattttgcgaccaaggaatttgtgaggaattttatgt 499  Q
    ||||| ||||||||||| ||||||||||||||||||| |||||||| ||||| ||||||||||||||||||||  |||||||||||||||||||| || |    
T  18551398 caaaaattagtgagggatatttagtgagggaaaacataaaatccctctctaattccgtcactaaattttgcgattaaggaatttgtgaggaatttcattt 18551299  T
Q  500 tttctgtcacnaattnccctccctaattttgcnttt 535  Q
    |||| ||||| ||||  |||| |||||||||| |||    
T  18551298 tttccgtcactaattttcctcgctaattttgctttt 18551263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 401 - 530
Target Start/End: Complemental strand, 23388522 - 23388393
Alignment:
Q  401 aaaagttagtgagggaaatttagtgagggaaaacatgaaatccctttctaantccgtcactaaattttgcgaccaaggaatttgtgaggaattttatgtt 500  Q
    |||| |||||||||||||||| |||||||||||| |||||||||| ||||| ||||||||||||||||||||||| | ||||||||| |||||| || ||    
T  23388522 aaaaattagtgagggaaattttgtgagggaaaacgtgaaatccctctctaattccgtcactaaattttgcgaccatgaaatttgtgaagaatttcatttt 23388423  T
Q  501 ttctgtcacnaattnccctccctaattttg 530  Q
    ||| ||||| |||| ||||| |||||||||    
T  23388422 ttccgtcaccaatttccctcgctaattttg 23388393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 76; E-Value: 7e-35
Query Start/End: Original strand, 400 - 535
Target Start/End: Complemental strand, 13788200 - 13788065
Alignment:
Q  400 caaaagttagtgagggaaatttagtgagggaaaacatgaaatccctttctaantccgtcactaaattttgcgaccaaggaatttgtgaggaattttatgt 499  Q
    ||||| ||||||||| ||||||||||||||||||  | |||||||| ||||| | |||||||||||||||||||||||||||||||||||||||| || |    
T  13788200 caaaaattagtgaggaaaatttagtgagggaaaatgtaaaatccctctctaatttcgtcactaaattttgcgaccaaggaatttgtgaggaatttcattt 13788101  T
Q  500 tttctgtcacnaattnccctccctaattttgcnttt 535  Q
    |||| |||||  ||| ||||| |||||||||| |||    
T  13788100 tttccgtcactgatttccctcgctaattttgctttt 13788065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 76; E-Value: 7e-35
Query Start/End: Original strand, 400 - 535
Target Start/End: Complemental strand, 20065219 - 20065084
Alignment:
Q  400 caaaagttagtgagggaaatttagtgagggaaaacatgaaatccctttctaantccgtcactaaattttgcgaccaaggaatttgtgaggaattttatgt 499  Q
    ||||| |||||||||||||||| |||||| ||||| |||||||||| ||||| || |||||||||||||||||||| | |||||||||||||||| || |    
T  20065219 caaaaattagtgagggaaattttgtgaggaaaaacgtgaaatccctctctaattcagtcactaaattttgcgaccatgaaatttgtgaggaatttcattt 20065120  T
Q  500 tttctgtcacnaattnccctccctaattttgcnttt 535  Q
    |||| ||||| |||| ||||| |||||||||| |||    
T  20065119 tttccgtcactaatttccctcgctaattttgctttt 20065084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 76; E-Value: 7e-35
Query Start/End: Original strand, 400 - 535
Target Start/End: Complemental strand, 22140509 - 22140374
Alignment:
Q  400 caaaagttagtgagggaaatttagtgagggaaaacatgaaatccctttctaantccgtcactaaattttgcgaccaaggaatttgtgaggaattttatgt 499  Q
    ||||| |||||||||||||||| ||||  |||||| |||||||||| ||||| ||||||||||||||||||||||| |||||||||||||||||| || |    
T  22140509 caaaaattagtgagggaaattttgtgaaagaaaacgtgaaatccctctctaattccgtcactaaattttgcgaccatggaatttgtgaggaatttcattt 22140410  T
Q  500 tttctgtcacnaattnccctccctaattttgcnttt 535  Q
    |||| ||||| |||| |||||  ||||||||| |||    
T  22140409 tttccgtcactaatttccctcgttaattttgctttt 22140374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 76; E-Value: 7e-35
Query Start/End: Original strand, 400 - 535
Target Start/End: Original strand, 41736162 - 41736297
Alignment:
Q  400 caaaagttagtgagggaaatttagtgagggaaaacatgaaatccctttctaantccgtcactaaattttgcgaccaaggaatttgtgaggaattttatgt 499  Q
    ||||| ||||||||| ||||||||||||||||||  | |||||||| ||||| | |||||||||||||||||| ||||||||||||||||||||| || |    
T  41736162 caaaaattagtgaggaaaatttagtgagggaaaatgtaaaatccctctctaatttcgtcactaaattttgcgatcaaggaatttgtgaggaatttcattt 41736261  T
Q  500 tttctgtcacnaattnccctccctaattttgcnttt 535  Q
    |||| ||||| |||| ||||| |||||||||| |||    
T  41736262 tttccgtcactaatttccctcgctaattttgctttt 41736297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 406 - 535
Target Start/End: Original strand, 32008948 - 32009078
Alignment:
Q  406 ttagtgagggaaatttagtgagggaaaacatgaaatccctttctaantccgtcactaaattttgcgaccaaggaatttgtgaggaatttta-tgttttct 504  Q
    ||||||||||||||||| ||||||||||| | |||||||| ||||| |||||||||||||||||||||||||||||||||||||||||| | | |||||     
T  32008948 ttagtgagggaaatttaatgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaaggaatttgtgaggaatttcatttttttcc 32009047  T
Q  505 gtcacnaattnccctccctaattttgcnttt 535  Q
    ||||| ||||  |||| |||||||||| |||    
T  32009048 gtcactaattttcctcgctaattttgctttt 32009078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 400 - 530
Target Start/End: Complemental strand, 21293856 - 21293726
Alignment:
Q  400 caaaagttagtgagggaaatttagtgagggaaaacatgaaatccctttctaantccgtcactaaattttgcgaccaaggaatttgtgaggaattttatgt 499  Q
    ||||| |||||||||||||||| |||||||||||| ||||||| || ||||| |||||||||||||||| |||||| |||||||||||| ||||| || |    
T  21293856 caaaaattagtgagggaaattttgtgagggaaaacgtgaaatctctctctaattccgtcactaaattttacgaccatggaatttgtgagaaatttcattt 21293757  T
Q  500 tttctgtcacnaattnccctccctaattttg 530  Q
    |||| ||||| |||| ||||| |||||||||    
T  21293756 tttccgtcactaatttccctcgctaattttg 21293726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 400 - 530
Target Start/End: Original strand, 32185822 - 32185952
Alignment:
Q  400 caaaagttagtgagggaaatttagtgagggaaaacatgaaatccctttctaantccgtcactaaattttgcgaccaaggaatttgtgaggaattttatgt 499  Q
    ||||| |||||||||||||||| |||||||||||| |||||||||| ||||| |||||||||||||||| |||||| | |||||| ||||||||| || |    
T  32185822 caaaaattagtgagggaaattttgtgagggaaaacgtgaaatccctctctaattccgtcactaaattttacgaccatgaaatttgcgaggaatttcattt 32185921  T
Q  500 tttctgtcacnaattnccctccctaattttg 530  Q
    |||| ||||| |||| ||||| |||||||||    
T  32185922 tttccgtcactaatttccctcgctaattttg 32185952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 400 - 530
Target Start/End: Complemental strand, 44366142 - 44366012
Alignment:
Q  400 caaaagttagtgagggaaatttagtgagggaaaacatgaaatccctttctaantccgtcactaaattttgcgaccaaggaatttgtgaggaattttatgt 499  Q
    ||||| |||||||||||| |||||||||| |||||||||||||||| ||||| ||| ||| | ||||||| |||||| |||||||||||||||||||| |    
T  44366142 caaaaattagtgagggaagtttagtgaggaaaaacatgaaatccctctctaattccctcattgaattttgtgaccaacgaatttgtgaggaattttattt 44366043  T
Q  500 tttctgtcacnaattnccctccctaattttg 530  Q
    |||||||||  |||| ||||| |||||||||    
T  44366042 tttctgtcattaatttccctctctaattttg 44366012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 400 - 535
Target Start/End: Complemental strand, 14757266 - 14757131
Alignment:
Q  400 caaaagttagtgagggaaatttagtgagggaaaacatgaaatccctttctaantccgtcactaaattttgcgaccaaggaatttgtgaggaattttatgt 499  Q
    ||||| |||||||| || ||||||||||||||||||||||||| || ||||| ||||||||||||||||||||||||| |||||||||||||||| || |    
T  14757266 caaaaattagtgagtgatatttagtgagggaaaacatgaaatctctctctaattccgtcactaaattttgcgaccaagaaatttgtgaggaatttcattt 14757167  T
Q  500 tttctgtcacnaattnccctccctaattttgcnttt 535  Q
    |||| ||||  ||||  | || |||||||||| |||    
T  14757166 tttccgtcattaattttcttcgctaattttgctttt 14757131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 400 - 531
Target Start/End: Complemental strand, 26687836 - 26687704
Alignment:
Q  400 caaaagttagtgagggaaatttagtgagggaaaacatgaaatccctttctaantccgtcactaaattttgcgaccaaggaatttgtgaggaatttta-tg 498  Q
    ||||| |||||||| |||||||||||| |||||||||||||||| | ||||| |||||||||||||||||| ||||||||||||||||| ||||||| |     
T  26687836 caaaaattagtgagcgaaatttagtgacggaaaacatgaaatccatctctaattccgtcactaaattttgcaaccaaggaatttgtgagaaattttattt 26687737  T
Q  499 ttttctgtcacnaattnccctccctaattttgc 531  Q
    ||||| ||||  |||| |||||| |||||||||    
T  26687736 ttttccgtcattaatttccctccttaattttgc 26687704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 401 - 529
Target Start/End: Complemental strand, 37724136 - 37724008
Alignment:
Q  401 aaaagttagtgagggaaatttagtgagggaaaacatgaaatccctttctaantccgtcactaaattttgcgaccaaggaatttgtgaggaattttatgtt 500  Q
    |||| |||||||| |||||||||||||||||||| ||||||||||  ||||  ||||||||||||||||||||||| ||||||||||||||||| || ||    
T  37724136 aaaaattagtgagagaaatttagtgagggaaaacgtgaaatccctcgctaataccgtcactaaattttgcgaccaaagaatttgtgaggaatttcatttt 37724037  T
Q  501 ttctgtcacnaattnccctccctaatttt 529  Q
    ||| ||||| |||| ||||| || |||||    
T  37724036 ttccgtcactaatttccctcgctgatttt 37724008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 420 - 535
Target Start/End: Complemental strand, 43408636 - 43408521
Alignment:
Q  420 ttagtgagggaaaacatgaaatccctttctaantccgtcactaaattttgcgaccaaggaatttgtgaggaattttatgttttctgtcacnaattnccct 519  Q
    ||||||||||||||| | |||||||| ||||| ||||||||||||||||||||||||| |||||||||||||||| || ||||| ||||| |||| ||||    
T  43408636 ttagtgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaagaaatttgtgaggaatttcattttttccgtcactaatttccct 43408537  T
Q  520 ccctaattttgcnttt 535  Q
    | |||||||||| |||    
T  43408536 cactaattttgctttt 43408521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 400 - 530
Target Start/End: Original strand, 8430286 - 8430416
Alignment:
Q  400 caaaagttagtgagggaaatttagtgagggaaaacatgaaatccctttctaantccgtcactaaattttgcgaccaaggaatttgtgaggaattttatgt 499  Q
    ||||| |||||||||||||||| |||||||||||| |||||||||| ||||| |||||||||||||||| ||| ||   ||||||||||||||||||| |    
T  8430286 caaaaattagtgagggaaattttgtgagggaaaacgtgaaatccctctctaattccgtcactaaattttacgatcataaaatttgtgaggaattttattt 8430385  T
Q  500 tttctgtcacnaattnccctccctaattttg 530  Q
    |||| ||||| |||| ||| | |||||||||    
T  8430386 tttccgtcactaatttcccccgctaattttg 8430416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 400 - 536
Target Start/End: Complemental strand, 18916545 - 18916410
Alignment:
Q  400 caaaagttagtgagggaaatttagtgagggaaaacatgaaatccctttctaantccgtcactaaattttgcgaccaaggaatttgtgaggaattttatgt 499  Q
    ||||| |||||||| ||||||||| ||||||||||||||||||||| ||||| || ||||||||||||||||| |||  ||||||||||| ||||||| |    
T  18916545 caaaaattagtgagagaaatttagggagggaaaacatgaaatccctctctaattcagtcactaaattttgcgatcaaaaaatttgtgagggattttat-t 18916447  T
Q  500 tttctgtcacnaattnccctccctaattttgcntttc 536  Q
    |||| ||||  |||| |||| ||||||||||| ||||    
T  18916446 tttccgtcagtaatttccctgcctaattttgcttttc 18916410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 400 - 483
Target Start/End: Original strand, 27523001 - 27523084
Alignment:
Q  400 caaaagttagtgagggaaatttagtgagggaaaacatgaaatccctttctaantccgtcactaaattttgcgaccaaggaattt 483  Q
    ||||| ||||||||||| |||||||||||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||    
T  27523001 caaaaattagtgagggatatttagtgagggaaaacatgaaatccctctctaattccgtcactaaattttgcgaccaaggaattt 27523084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 416 - 535
Target Start/End: Original strand, 12779606 - 12779725
Alignment:
Q  416 aaatttagtgagggaaaacatgaaatccctttctaantccgtcactaaattttgcgaccaaggaatttgtgaggaattttatgttttctgtcacnaattn 515  Q
    ||||||||||||||||||| | |||| ||| ||||| | |||||||||||||||||||||| ||||||||||||||||| || ||||| ||||| ||||     
T  12779606 aaatttagtgagggaaaacgtaaaattcctctctaatttcgtcactaaattttgcgaccaatgaatttgtgaggaatttcattttttccgtcactaattt 12779705  T
Q  516 ccctccctaattttgcnttt 535  Q
    ||||| |||||||||| |||    
T  12779706 ccctcgctaattttgctttt 12779725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 401 - 529
Target Start/End: Original strand, 28262355 - 28262483
Alignment:
Q  401 aaaagttagtgagggaaatttagtgagggaaaacatgaaatccctttctaantccgtcactaaattttgcgaccaaggaatttgtgaggaattttatgtt 500  Q
    |||| |||||||||||||||| |||||||||||| |||||||||| ||||| ||||||||||||||||| ||||| | |||||||||||||||| || ||    
T  28262355 aaaaattagtgagggaaattttgtgagggaaaacgtgaaatccctctctaattccgtcactaaattttgtgaccatgaaatttgtgaggaatttcatttt 28262454  T
Q  501 ttctgtcacnaattnccctccctaatttt 529  Q
    |||  |||| |||| ||||  ||||||||    
T  28262455 ttccatcactaatttcccttgctaatttt 28262483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 416 - 535
Target Start/End: Original strand, 37552233 - 37552352
Alignment:
Q  416 aaatttagtgagggaaaacatgaaatccctttctaantccgtcactaaattttgcgaccaaggaatttgtgaggaattttatgttttctgtcacnaattn 515  Q
    ||||||||||||||||||  | |||||||| ||||| ||||||| |||||||||||||||| ||||||||||||||||| || ||||| ||||| ||||     
T  37552233 aaatttagtgagggaaaatgtaaaatccctctctaattccgtcattaaattttgcgaccaaagaatttgtgaggaatttcattttttccgtcactaattt 37552332  T
Q  516 ccctccctaattttgcnttt 535  Q
    ||||| |||||||||| |||    
T  37552333 ccctcgctaattttgctttt 37552352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 408 - 535
Target Start/End: Original strand, 44722930 - 44723057
Alignment:
Q  408 agtgagggaaatttagtgagggaaaacatgaaatccctttctaantccgtcactaaattttgcgaccaaggaatttgtgaggaattttatgttttctgtc 507  Q
    ||||||||| |||||||||| ||||| ||||||||||| ||||| ||||||||||||||||||||| ||||||||||| |||||||| || |||||  ||    
T  44722930 agtgagggatatttagtgagagaaaatatgaaatccctctctaattccgtcactaaattttgcgactaaggaatttgtaaggaatttcattttttccatc 44723029  T
Q  508 acnaattnccctccctaattttgcnttt 535  Q
    |  |||| ||||| |||||||||| |||    
T  44723030 attaatttccctcgctaattttgctttt 44723057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 412 - 529
Target Start/End: Complemental strand, 13613226 - 13613109
Alignment:
Q  412 agggaaatttagtgagggaaaacatgaaatccctttctaantccgtcactaaattttgcgaccaaggaatttgtgaggaattttatgttttctgtcacna 511  Q
    |||||| |||||||||||||||| | |||||||| ||||| |||||||||||||||||||||||| ||||||||||||||||| || ||||  ||||| |    
T  13613226 agggaagtttagtgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgaggaatttcatttttttcgtcacta 13613127  T
Q  512 attnccctccctaatttt 529  Q
    |||  |||| ||||||||    
T  13613126 attttcctcgctaatttt 13613109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 416 - 535
Target Start/End: Complemental strand, 23858086 - 23857968
Alignment:
Q  416 aaatttagtgagggaaaacatgaaatccctttctaantccgtcactaaattttgcgaccaaggaatttgtgaggaattttatgttttctgtcacnaattn 515  Q
    ||||||||||||||||||| | |||||  | ||||| |||||||||||||||||||||||||||||||||||||||||| || ||| | ||||| ||||     
T  23858086 aaatttagtgagggaaaacgtaaaatcattctctaattccgtcactaaattttgcgaccaaggaatttgtgaggaatttcat-tttcccgtcactaattt 23857988  T
Q  516 ccctccctaattttgcnttt 535  Q
    ||||| |||||||||| |||    
T  23857987 ccctcgctaattttgctttt 23857968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 420 - 535
Target Start/End: Complemental strand, 44476500 - 44476385
Alignment:
Q  420 ttagtgagggaaaacatgaaatccctttctaantccgtcactaaattttgcgaccaaggaatttgtgaggaattttatgttttctgtcacnaattnccct 519  Q
    ||||||| ||||||| | ||||| || ||||| ||||||||||||||||||||||||||||||||||| |||||| || ||||| ||||| |||| ||||    
T  44476500 ttagtgaaggaaaacgtaaaatctctctctaattccgtcactaaattttgcgaccaaggaatttgtgaagaatttcattttttccgtcactaatttccct 44476401  T
Q  520 ccctaattttgcnttt 535  Q
    | |||||||||| |||    
T  44476400 cgctaattttgctttt 44476385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 420 - 535
Target Start/End: Original strand, 7093578 - 7093693
Alignment:
Q  420 ttagtgagggaaaacatgaaatccctttctaantccgtcactaaattttgcgaccaaggaatttgtgaggaattttatgttttctgtcacnaattnccct 519  Q
    ||||||||||||||| | |||||||| ||||| |  |||||||||||||||||||||  |||||||||||||||| || ||||| ||||| |||| ||||    
T  7093578 ttagtgagggaaaacgtaaaatccctctctaattttgtcactaaattttgcgaccaaaaaatttgtgaggaatttcattttttccgtcactaatttccct 7093677  T
Q  520 ccctaattttgcnttt 535  Q
    | |||||||||| |||    
T  7093678 cgctaattttgctttt 7093693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 400 - 519
Target Start/End: Original strand, 40018792 - 40018911
Alignment:
Q  400 caaaagttagtgagggaaatttagtgagggaaaacatgaaatccctttctaantccgtcactaaattttgcgaccaaggaatttgtgaggaattttatgt 499  Q
    ||||| ||||||| | ||||||||||||||||||||||||||| || ||||| ||  ||||| |||||||| ||||| |||||||| || |||||||| |    
T  40018792 caaaaattagtgacgaaaatttagtgagggaaaacatgaaatctctctctaattctctcactgaattttgcaaccaacgaatttgtaagaaattttattt 40018891  T
Q  500 tttctgtcacnaattnccct 519  Q
    |||| ||||| |||| ||||    
T  40018892 tttccgtcactaatttccct 40018911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 453 - 535
Target Start/End: Complemental strand, 27040000 - 27039918
Alignment:
Q  453 tccgtcactaaattttgcgaccaaggaatttgtgaggaattttatgttttctgtcacnaattnccctccctaattttgcnttt 535  Q
    ||||||||||||||||||||||||| |||||||||||||||| || ||||| ||||| |||| ||||| |||||||||| |||    
T  27040000 tccgtcactaaattttgcgaccaagaaatttgtgaggaatttcattttttccgtcactaatttccctctctaattttgctttt 27039918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 430 - 528
Target Start/End: Original strand, 35697475 - 35697573
Alignment:
Q  430 aaaacatgaaatccctttctaantccgtcactaaattttgcgaccaaggaatttgtgaggaattttatgttttctgtcacnaattnccctccctaattt 528  Q
    |||||||||||| ||| ||||| ||||||||||||||||||||||||  ||||||||||  ||||||| ||||| || || |||| |||||||||||||    
T  35697475 aaaacatgaaattcctctctaattccgtcactaaattttgcgaccaaaaaatttgtgagagattttattttttccgttactaatttccctccctaattt 35697573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 406 - 537
Target Start/End: Original strand, 18609510 - 18609641
Alignment:
Q  406 ttagtgagggaaatttagtgagggaaaacatgaaatccctttctaantccgtcactaaattttgcgaccaaggaatttgtgaggaattttatgttttctg 505  Q
    |||||| ||||||||||||||||||||||||||||| ||| ||||| | | | || ||||||||||| |||||||||||||||| ||| ||| || || |    
T  18609510 ttagtgggggaaatttagtgagggaaaacatgaaatacctctctaatttcatgacaaaattttgcgatcaaggaatttgtgagggattctattttctccg 18609609  T
Q  506 tcacnaattnccctccctaattttgcntttcc 537  Q
    |||| ||||  ||||| || |||| | |||||    
T  18609610 tcactaattttcctccttatttttacttttcc 18609641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 420 - 535
Target Start/End: Complemental strand, 26243446 - 26243331
Alignment:
Q  420 ttagtgagggaaaacatgaaatccctttctaantccgtcactaaattttgcgaccaaggaatttgtgaggaattttatgttttctgtcacnaattnccct 519  Q
    ||||||||| ||||| | |||| ||| ||||| |||||||||||||||| ||||||| |||||||||||||||||||| ||| | | ||| |||| ||||    
T  26243446 ttagtgaggaaaaacgtaaaattcctctctaattccgtcactaaattttacgaccaatgaatttgtgaggaattttatttttaccgccactaatttccct 26243347  T
Q  520 ccctaattttgcnttt 535  Q
    |  ||||||||| |||    
T  26243346 cgttaattttgctttt 26243331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 418 - 530
Target Start/End: Original strand, 36550844 - 36550955
Alignment:
Q  418 atttagtgagggaaaacatgaaatccctttctaantccgtcactaaattttgcgaccaaggaatttgtgaggaattttatgttttctgtcacnaattncc 517  Q
    |||||||||||||||||||||||||||| | ||| ||| ||||||||||||||||||||  || |||||||| | ||||| |||||  |||| |||| ||    
T  36550844 atttagtgagggaaaacatgaaatccctctataattccatcactaaattttgcgaccaaataacttgtgaggga-tttattttttccatcactaatttcc 36550942  T
Q  518 ctccctaattttg 530  Q
    ||| |||||||||    
T  36550943 ctctctaattttg 36550955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 406 - 537
Target Start/End: Complemental strand, 37802517 - 37802387
Alignment:
Q  406 ttagtgagggaaatttagtgagggaaaacatgaaatccctttctaantccgtcactaaattttgcgaccaaggaatttgtgaggaattttatgttttctg 505  Q
    |||||||||||||||||| |||||||||| | |||||  | ||||| ||||||||||||||||||||||||  || ||| |||  ||||||| ||||| |    
T  37802517 ttagtgagggaaatttagagagggaaaacgtaaaatcagtctctaattccgtcactaaattttgcgaccaa-aaaattgcgagagattttattttttccg 37802419  T
Q  506 tcacnaattnccctccctaattttgcntttcc 537  Q
    |||  |||| | |||||||||||||| |||||    
T  37802418 tcatcaatttctctccctaattttgcttttcc 37802387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 420 - 535
Target Start/End: Complemental strand, 38362396 - 38362281
Alignment:
Q  420 ttagtgagggaaaacatgaaatccctttctaantccgtcactaaattttgcgaccaaggaatttgtgaggaattttatgttttctgtcacnaattnccct 519  Q
    |||| |||||||||| | |||||| ||||||| || |||||| |||||| ||||||| ||||||||||||||||| || ||||| ||||| |||| ||||    
T  38362396 ttagcgagggaaaacgtaaaatccttttctaattctgtcacttaattttacgaccaaagaatttgtgaggaatttcattttttccgtcactaatttccct 38362297  T
Q  520 ccctaattttgcnttt 535  Q
      |||||||||| |||    
T  38362296 tactaattttgctttt 38362281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 400 - 529
Target Start/End: Original strand, 2556085 - 2556214
Alignment:
Q  400 caaaagttagtgagggaaatttagtgagggaaaacatgaaatccctttctaantccgtcactaaattttgcgaccaaggaatttgtgaggaattttatgt 499  Q
    ||||| |||||||||||| ||||| |||||||||  ||||||   | ||||| |||||||||||||||| | |||||| |||||||||| |||||||| |    
T  2556085 caaaaattagtgagggaattttagagagggaaaatgtgaaatttttctctaattccgtcactaaattttacaaccaagaaatttgtgagaaattttattt 2556184  T
Q  500 tttctgtcacnaattnccctccctaatttt 529  Q
    ||||  |||| ||||  |||| ||||||||    
T  2556185 tttccatcactaattttcctctctaatttt 2556214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 416 - 531
Target Start/End: Original strand, 8763640 - 8763755
Alignment:
Q  416 aaatttagtgagggaaaacatgaaatccctttctaantccgtcactaaattttgcgaccaaggaatttgtgaggaattttatgttttctgtcacnaattn 515  Q
    ||||||||||| |||||||||||||||| | ||||| ||||||| ||||||||  || ||||||||||||| |  ||||||| ||||| ||||| || |     
T  8763640 aaatttagtgaaggaaaacatgaaatccatctctaattccgtcattaaattttatgatcaaggaatttgtgcgagattttattttttccgtcactaactt 8763739  T
Q  516 ccctccctaattttgc 531  Q
      ||||||||||||||    
T  8763740 ttctccctaattttgc 8763755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 400 - 530
Target Start/End: Original strand, 36373890 - 36374018
Alignment:
Q  400 caaaagttagtgagggaaatttagtgagggaaaacatgaaatccctttctaantccgtcactaaattttgcgaccaaggaatttgtgaggaattttatgt 499  Q
    ||||| ||||||||| ||||||||||||||||||  |||||| |||  |||| || ||||||||||||| ||| ||||||||||| |||| ||||||| |    
T  36373890 caaaaattagtgaggaaaatttagtgagggaaaatgtgaaattcct--ctaattcagtcactaaattttacgatcaaggaatttgagagggattttattt 36373987  T
Q  500 tttctgtcacnaattnccctccctaattttg 530  Q
    |||| ||| | || |   |||||||||||||    
T  36373988 tttccgtcgctaaatttactccctaattttg 36374018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 401 - 519
Target Start/End: Complemental strand, 13134764 - 13134646
Alignment:
Q  401 aaaagttagtgagggaaatttagtgagggaaaacatgaaatccctttctaantccgtcactaaattttgcgaccaaggaatttgtgaggaattttatgtt 500  Q
    |||| ||||||||  |||||||| || ||||||| |||||||||||||||| |  |||| |||||||| |||| ||  || |||||||| ||||||| ||    
T  13134764 aaaaattagtgagaaaaatttagagatggaaaacttgaaatccctttctaattttgtcaataaattttacgactaaaaaaattgtgagggattttatttt 13134665  T
Q  501 ttctgtcacnaattnccct 519  Q
    ||| ||||| |||| ||||    
T  13134664 ttccgtcactaatttccct 13134646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 400 - 494
Target Start/End: Complemental strand, 9004453 - 9004359
Alignment:
Q  400 caaaagttagtgagggaaatttagtgagggaaaacatgaaatccctttctaantccgtcactaaattttgcgaccaaggaatttgtgaggaattt 494  Q
    ||||| ||||||||||||||||||||||||||||  | ||||  || ||||| ||| |||||||||||||  || ||||||||| |||| |||||    
T  9004453 caaaaattagtgagggaaatttagtgagggaaaatgtaaaatttctctctaattccatcactaaattttgtaactaaggaatttatgagaaattt 9004359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 400 - 451
Target Start/End: Original strand, 22192182 - 22192233
Alignment:
Q  400 caaaagttagtgagggaaatttagtgagggaaaacatgaaatccctttctaa 451  Q
    ||||| ||||||| |||||||||||||||||||||||||||||||| |||||    
T  22192182 caaaaattagtgacggaaatttagtgagggaaaacatgaaatccctctctaa 22192233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 401 - 471
Target Start/End: Complemental strand, 29998703 - 29998633
Alignment:
Q  401 aaaagttagtgagggaaatttagtgagggaaaacatgaaatccctttctaantccgtcactaaattttgcg 471  Q
    |||| |||||||||||| ||||| || ||||||| |||||||| | ||||| |||||||||||||||||||    
T  29998703 aaaaattagtgagggaattttagagaaggaaaacgtgaaatccttctctaattccgtcactaaattttgcg 29998633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 422 - 514
Target Start/End: Complemental strand, 31966647 - 31966556
Alignment:
Q  422 agtgagggaaaacatgaaatccctttctaantccgtcactaaattttgcgaccaaggaatttgtgaggaattttatgttttctgtcacnaatt 514  Q
    ||||||||| ||||||||||| || ||||| |  || ||||||||||||||||||||||||| | ||| ||||||| ||||| ||||| ||||    
T  31966647 agtgagggataacatgaaatctctctctaattatgttactaaattttgcgaccaaggaatttat-agggattttattttttccgtcactaatt 31966556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 400 - 451
Target Start/End: Complemental strand, 27058461 - 27058410
Alignment:
Q  400 caaaagttagtgagggaaatttagtgagggaaaacatgaaatccctttctaa 451  Q
    ||||| ||||||||||||||||||||||||||||| | |||||||| |||||    
T  27058461 caaaaattagtgagggaaatttagtgagggaaaacgtaaaatccctctctaa 27058410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 401 - 528
Target Start/End: Original strand, 9590461 - 9590588
Alignment:
Q  401 aaaagttagtgagggaaatttagtgagggaaaacatgaaatccctttctaantccgtcactaaattttgcgaccaaggaatttgtgaggaattttatgtt 500  Q
    |||| |||||||||||||||||| |||  ||||| ||||||| || ||||| |  || ||||||||||||||  ||| ||||| | |   |||| || ||    
T  9590461 aaaaattagtgagggaaatttagcgagcaaaaacgtgaaatcgctctctaattttgttactaaattttgcgatgaagtaatttttaaaagatttcatttt 9590560  T
Q  501 ttctgtcacnaattnccctccctaattt 528  Q
    ||| ||||| |||| |||||||||||||    
T  9590561 ttccgtcactaatttccctccctaattt 9590588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 463 - 530
Target Start/End: Complemental strand, 16098999 - 16098932
Alignment:
Q  463 aattttgcgaccaaggaatttgtgaggaattttatgttttctgtcacnaattnccctccctaattttg 530  Q
    |||||||| ||||||||| |||||||  |||| || |||||||| || |||| |||||||||||||||    
T  16098999 aattttgcaaccaaggaaattgtgagagatttaattttttctgttactaatttccctccctaattttg 16098932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 406 - 497
Target Start/End: Original strand, 13436685 - 13436776
Alignment:
Q  406 ttagtgagggaaatttagtgagggaaaacatgaaatccctttctaantccgtcactaaattttgcgaccaaggaatttgtgaggaattttat 497  Q
    |||||||| |||||||| |||| ||||||||||| ||| |  |||| | ||||| |||||||| |||  ||| |||||||||| ||||||||    
T  13436685 ttagtgagagaaatttaatgagagaaaacatgaagtccttcactaatttcgtcattaaattttacgattaagaaatttgtgagaaattttat 13436776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0047 (Bit Score: 105; Significance: 3e-52; HSPs: 1)
Name: scaffold0047
Description:

Target: scaffold0047; HSP #1
Raw Score: 105; E-Value: 3e-52
Query Start/End: Original strand, 401 - 537
Target Start/End: Original strand, 58577 - 58713
Alignment:
Q  401 aaaagttagtgagggaaatttagtgagggaaaacatgaaatccctttctaantccgtcactaaattttgcgaccaaggaatttgtgaggaattttatgtt 500  Q
    |||| |||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||||||||||| ||||| ||||||||||||||||    
T  58577 aaaaattagtgagggaaatttagtgagggaaaacatgaaatccctctctaattccgtcactaaattttgcgaccaagaaatttttgaggaattttatgtt 58676  T
Q  501 ttctgtcacnaattnccctccctaattttgcntttcc 537  Q
    ||| ||||| |||| |||||||||||||||| |||||    
T  58677 ttccgtcacaaatttccctccctaattttgcttttcc 58713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 104; Significance: 1e-51; HSPs: 74)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 400 - 535
Target Start/End: Complemental strand, 50845475 - 50845340
Alignment:
Q  400 caaaagttagtgagggaaatttagtgagggaaaacatgaaatccctttctaantccgtcactaaattttgcgaccaaggaatttgtgaggaattttatgt 499  Q
    ||||| |||||| || |||||||||||||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  50845475 caaaaattagtgtggaaaatttagtgagggaaaacatgaaatccctctctaattccgtcactaaattttgcgaccaaggaatttgtgaggaattttatgt 50845376  T
Q  500 tttctgtcacnaattnccctccctaattttgcnttt 535  Q
    |||| ||||| |||| |||||||||||||||| |||    
T  50845375 tttccgtcacaaatttccctccctaattttgctttt 50845340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 400 - 537
Target Start/End: Original strand, 13102310 - 13102447
Alignment:
Q  400 caaaagttagtgagggaaatttagtgagggaaaacatgaaatccctttctaantccgtcactaaattttgcgaccaaggaatttgtgaggaattttatgt 499  Q
    ||||| ||||||||||||||||||||||||||||||| ||||| |||||||| ||||||||||||||||||||||||||||||||||| |||||||||||    
T  13102310 caaaaattagtgagggaaatttagtgagggaaaacataaaatctctttctaattccgtcactaaattttgcgaccaaggaatttgtgatgaattttatgt 13102409  T
Q  500 tttctgtcacnaattnccctccctaattttgcntttcc 537  Q
    |||| ||||| |||| |||||| ||||||||| |||||    
T  13102410 tttccgtcacaaatttccctccttaattttgcttttcc 13102447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 401 - 535
Target Start/End: Original strand, 12720804 - 12720938
Alignment:
Q  401 aaaagttagtgagggaaatttagtgagggaaaacatgaaatccctttctaantccgtcactaaattttgcgaccaaggaatttgtgaggaattttatgtt 500  Q
    |||| ||||||||||| |||||||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||| ||    
T  12720804 aaaaattagtgagggatatttagtgagggaaaacatgaaatccctctctaattccgtcactaaattttgcgaccaaggaatttgtgaggaattttatttt 12720903  T
Q  501 ttctgtcacnaattnccctccctaattttgcnttt 535  Q
    ||| ||||| |||| ||||| |||||||||| |||    
T  12720904 ttccgtcactaatttccctcgctaattttgctttt 12720938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 96; E-Value: 8e-47
Query Start/End: Original strand, 400 - 535
Target Start/End: Original strand, 14760861 - 14760996
Alignment:
Q  400 caaaagttagtgagggaaatttagtgagggaaaacatgaaatccctttctaantccgtcactaaattttgcgaccaaggaatttgtgaggaattttatgt 499  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||  |||| |||||||||||||||||||||||| ||||||||||||||||||||||    
T  14760861 caaaaattagtgagggaaatttagtgagggaaaacatgaaatccctcactaattccgtcactaaattttgcgaccaaagaatttgtgaggaattttatgt 14760960  T
Q  500 tttctgtcacnaattnccctccctaattttgcnttt 535  Q
    |||| ||||| |||| |||||  ||||||||| |||    
T  14760961 tttccgtcacaaatttccctctttaattttgctttt 14760996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 93; E-Value: 5e-45
Query Start/End: Original strand, 401 - 537
Target Start/End: Original strand, 7830026 - 7830162
Alignment:
Q  401 aaaagttagtgagggaaatttagtgagggaaaacatgaaatccctttctaantccgtcactaaattttgcgaccaaggaatttgtgaggaattttatgtt 500  Q
    |||| ||||||||||||||||||||||||||||||||||||||||  |||| | |||||||||||||||||||||||||||||||||| |||||||||||    
T  7830026 aaaaattagtgagggaaatttagtgagggaaaacatgaaatccctccctaatttcgtcactaaattttgcgaccaaggaatttgtgagaaattttatgtt 7830125  T
Q  501 ttctgtcacnaattnccctccctaattttgcntttcc 537  Q
    |||  |||  |||| |||||||||||||||| |||||    
T  7830126 ttccatcataaatttccctccctaattttgcttttcc 7830162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 400 - 528
Target Start/End: Original strand, 6459211 - 6459339
Alignment:
Q  400 caaaagttagtgagggaaatttagtgagggaaaacatgaaatccctttctaantccgtcactaaattttgcgaccaaggaatttgtgaggaattttatgt 499  Q
    ||||| ||||||||||| |||||||||||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||| || |    
T  6459211 caaaaattagtgagggatatttagtgagggaaaacatgaaatccctctctaattccgtcactaaattttgcgaccaaggaatttgtgaggaatttcattt 6459310  T
Q  500 tttctgtcacnaattnccctccctaattt 528  Q
    |||| ||||| |||| ||||| |||||||    
T  6459311 tttccgtcactaatttccctcgctaattt 6459339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 400 - 535
Target Start/End: Complemental strand, 9110120 - 9109985
Alignment:
Q  400 caaaagttagtgagggaaatttagtgagggaaaacatgaaatccctttctaantccgtcactaaattttgcgaccaaggaatttgtgaggaattttatgt 499  Q
    ||||| ||||||||||| |||||||||||||||||||||||||||| ||||| ||||||||||||||||||||||||| |||||||||||||||| || |    
T  9110120 caaaaattagtgagggatatttagtgagggaaaacatgaaatccctctctaattccgtcactaaattttgcgaccaagaaatttgtgaggaatttcattt 9110021  T
Q  500 tttctgtcacnaattnccctccctaattttgcnttt 535  Q
    |||| ||||| |||| ||||| |||||||||| |||    
T  9110020 tttccgtcactaatttccctcgctaattttgctttt 9109985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 400 - 535
Target Start/End: Original strand, 45839286 - 45839421
Alignment:
Q  400 caaaagttagtgagggaaatttagtgagggaaaacatgaaatccctttctaantccgtcactaaattttgcgaccaaggaatttgtgaggaattttatgt 499  Q
    ||||| ||||||||||| |||||||||||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||| || |    
T  45839286 caaaaattagtgagggatatttagtgagggaaaacatgaaatccctctctaattccgtcactaaattttgcgaccaaggaatttgtgaggaatttcattt 45839385  T
Q  500 tttctgtcacnaattnccctccctaattttgcnttt 535  Q
    |||| ||||| |||| |||||  ||||||||| |||    
T  45839386 tttccgtcactaatttccctcgttaattttgctttt 45839421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 88; E-Value: 5e-42
Query Start/End: Original strand, 400 - 535
Target Start/End: Original strand, 41752427 - 41752562
Alignment:
Q  400 caaaagttagtgagggaaatttagtgagggaaaacatgaaatccctttctaantccgtcactaaattttgcgaccaaggaatttgtgaggaattttatgt 499  Q
    ||||| ||||||||||| |||||||||||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||||  |||||||| |    
T  41752427 caaaaattagtgagggatatttagtgagggaaaacatgaaatccctctctaattccgtcactaaattttgcgaccaaggaatttgtgaaaaattttattt 41752526  T
Q  500 tttctgtcacnaattnccctccctaattttgcnttt 535  Q
    |||| ||||| |||| || || |||||||||| |||    
T  41752527 tttccgtcactaatttccgtcactaattttgctttt 41752562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 400 - 529
Target Start/End: Original strand, 22158796 - 22158925
Alignment:
Q  400 caaaagttagtgagggaaatttagtgagggaaaacatgaaatccctttctaantccgtcactaaattttgcgaccaaggaatttgtgaggaattttatgt 499  Q
    ||||| |||||||||||||||| |||||||||||| |||||||||| ||||| ||||||||||||||||||||||| | |||||||||||||||| || |    
T  22158796 caaaaattagtgagggaaattttgtgagggaaaacgtgaaatccctctctaattccgtcactaaattttgcgaccatgaaatttgtgaggaatttcattt 22158895  T
Q  500 tttctgtcacnaattnccctccctaatttt 529  Q
    |||||||||| |||| ||||| ||||||||    
T  22158896 tttctgtcactaatttccctcgctaatttt 22158925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 400 - 535
Target Start/End: Complemental strand, 6412198 - 6412063
Alignment:
Q  400 caaaagttagtgagggaaatttagtgagggaaaacatgaaatccctttctaantccgtcactaaattttgcgaccaaggaatttgtgaggaattttatgt 499  Q
    ||||| ||||||||||| |||||||||||||||||||||||||||| | ||| ||||||||||||||||||||||||| |||||||||||||||| || |    
T  6412198 caaaaattagtgagggatatttagtgagggaaaacatgaaatccctctttaattccgtcactaaattttgcgaccaagaaatttgtgaggaatttcattt 6412099  T
Q  500 tttctgtcacnaattnccctccctaattttgcnttt 535  Q
    |||| || || |||| ||||| |||||||||| |||    
T  6412098 tttccgttactaatttccctcgctaattttgctttt 6412063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 406 - 537
Target Start/End: Complemental strand, 16913716 - 16913585
Alignment:
Q  406 ttagtgagggaaatttagtgagggaaaacatgaaatccctttctaantccgtcactaaattttgcgaccaaggaatttgtgaggaattttatgttttctg 505  Q
    |||||||||||||||||| ||||||||||||||||||||| ||||| ||||| | |||||||| |||| ||||||||||||||||||||||| ||||| |    
T  16913716 ttagtgagggaaatttagagagggaaaacatgaaatccctctctaattccgttattaaattttacgactaaggaatttgtgaggaattttattttttccg 16913617  T
Q  506 tcacnaattnccctccctaattttgcntttcc 537  Q
    |||| |||| |||| ||||||||||| |||||    
T  16913616 tcactaatttcccttcctaattttgcttttcc 16913585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 81; E-Value: 7e-38
Query Start/End: Original strand, 400 - 529
Target Start/End: Original strand, 9464097 - 9464226
Alignment:
Q  400 caaaagttagtgagggaaatttagtgagggaaaacatgaaatccctttctaantccgtcactaaattttgcgaccaaggaatttgtgaggaattttatgt 499  Q
    ||||| |||||||||||||||| |||||||||||| |||||||||| ||||| ||||||||||||||||||||||| |||||||||||||||||| || |    
T  9464097 caaaaattagtgagggaaattttgtgagggaaaacgtgaaatccctctctaattccgtcactaaattttgcgaccatggaatttgtgaggaatttcattt 9464196  T
Q  500 tttctgtcacnaattnccctccctaatttt 529  Q
    |||| ||||| |||| || || ||||||||    
T  9464197 tttccgtcactaatttccgtcactaatttt 9464226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 81; E-Value: 7e-38
Query Start/End: Original strand, 400 - 514
Target Start/End: Original strand, 15243079 - 15243193
Alignment:
Q  400 caaaagttagtgagggaaatttagtgagggaaaacatgaaatccctttctaantccgtcactaaattttgcgaccaaggaatttgtgaggaattttatgt 499  Q
    ||||| ||||||||||||||||||||||||||||| |||||||||| ||||| |||||||||||||||||||| ||||||||||||||||||||| || |    
T  15243079 caaaaattagtgagggaaatttagtgagggaaaacgtgaaatccctatctaattccgtcactaaattttgcgatcaaggaatttgtgaggaatttcattt 15243178  T
Q  500 tttctgtcacnaatt 514  Q
    |||| ||||| ||||    
T  15243179 tttccgtcactaatt 15243193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 81; E-Value: 7e-38
Query Start/End: Original strand, 400 - 529
Target Start/End: Complemental strand, 22789736 - 22789607
Alignment:
Q  400 caaaagttagtgagggaaatttagtgagggaaaacatgaaatccctttctaantccgtcactaaattttgcgaccaaggaatttgtgaggaattttatgt 499  Q
    ||||| |||||||||||||||||| |||||||||| ||||||| || ||||| || |||||||||||||||||||| |||||||||||| ||||||||||    
T  22789736 caaaaattagtgagggaaatttagagagggaaaacgtgaaatctctatctaattcagtcactaaattttgcgaccatggaatttgtgagaaattttatgt 22789637  T
Q  500 tttctgtcacnaattnccctccctaatttt 529  Q
    |||| ||||| ||||  |||||||||||||    
T  22789636 tttccgtcactaattttcctccctaatttt 22789607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 400 - 535
Target Start/End: Complemental strand, 20408305 - 20408170
Alignment:
Q  400 caaaagttagtgagggaaatttagtgagggaaaacatgaaatccctttctaantccgtcactaaattttgcgaccaaggaatttgtgaggaattttatgt 499  Q
    ||||| |||||||||||||||| |||||||||||| |||||||||| ||||| ||||| ||||||||||||||||| |||||||||||||||||| || |    
T  20408305 caaaaattagtgagggaaattttgtgagggaaaacgtgaaatccctctctaattccgttactaaattttgcgaccatggaatttgtgaggaatttcattt 20408206  T
Q  500 tttctgtcacnaattnccctccctaattttgcnttt 535  Q
    |||| ||||| ||||  |||| |||||||||| |||    
T  20408205 tttccgtcactaattttcctcgctaattttgctttt 20408170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 401 - 529
Target Start/End: Complemental strand, 38531314 - 38531186
Alignment:
Q  401 aaaagttagtgagggaaatttagtgagggaaaacatgaaatccctttctaantccgtcactaaattttgcgaccaaggaatttgtgaggaattttatgtt 500  Q
    |||| |||||||||||||||||| |||||||||| ||||||| || ||||| ||| ||||||||||||||||| ||||||||||||||||||||||| ||    
T  38531314 aaaaattagtgagggaaatttagagagggaaaacgtgaaatctctctctaattccatcactaaattttgcgactaaggaatttgtgaggaattttatttt 38531215  T
Q  501 ttctgtcacnaattnccctccctaatttt 529  Q
    ||| |||||  ||| ||||||||||||||    
T  38531214 ttccgtcacttatttccctccctaatttt 38531186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 400 - 535
Target Start/End: Original strand, 52183672 - 52183807
Alignment:
Q  400 caaaagttagtgagggaaatttagtgagggaaaacatgaaatccctttctaantccgtcactaaattttgcgaccaaggaatttgtgaggaattttatgt 499  Q
    ||||| |||||||||||||||| |||||||||||| |||||||||| ||||| ||||||||||||||||||||||| | ||||||||||||||||||| |    
T  52183672 caaaaattagtgagggaaattttgtgagggaaaacgtgaaatccctctctaattccgtcactaaattttgcgaccatgaaatttgtgaggaattttattt 52183771  T
Q  500 tttctgtcacnaattnccctccctaattttgcnttt 535  Q
    |||| ||||  |||| |||||  ||||||||| |||    
T  52183772 tttccgtcattaatttccctcgttaattttgctttt 52183807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 400 - 537
Target Start/End: Complemental strand, 18895045 - 18894908
Alignment:
Q  400 caaaagttagtgagggaaatttagtgagggaaaacatgaaatccctttctaantccgtcactaaattttgcgaccaaggaatttgtgaggaattttatgt 499  Q
    ||||| ||||||||| |||||||||||||||||||||||||||||| ||||| | |||||||||||||||||||||| |||| ||||||| ||||||| |    
T  18895045 caaaaattagtgaggaaaatttagtgagggaaaacatgaaatccctctctaatttcgtcactaaattttgcgaccaaagaatatgtgaggtattttattt 18894946  T
Q  500 tttctgtcacnaattnccctccctaattttgcntttcc 537  Q
    |||  ||||| ||||  |||| |||||||||| |||||    
T  18894945 ttttcgtcactaattttcctcgctaattttgcttttcc 18894908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 408 - 514
Target Start/End: Complemental strand, 12174903 - 12174797
Alignment:
Q  408 agtgagggaaatttagtgagggaaaacatgaaatccctttctaantccgtcactaaattttgcgaccaaggaatttgtgaggaattttatgttttctgtc 507  Q
    ||||||||| |||||||||||||||||||||||||| | ||||| ||||||||||||||||||||| ||||||||||||||||||||||| ||||||||     
T  12174903 agtgagggatatttagtgagggaaaacatgaaatccttctctaattccgtcactaaattttgcgacgaaggaatttgtgaggaattttattttttctgtt 12174804  T
Q  508 acnaatt 514  Q
    || ||||    
T  12174803 actaatt 12174797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 76; E-Value: 7e-35
Query Start/End: Original strand, 416 - 535
Target Start/End: Original strand, 4340417 - 4340536
Alignment:
Q  416 aaatttagtgagggaaaacatgaaatccctttctaantccgtcactaaattttgcgaccaaggaatttgtgaggaattttatgttttctgtcacnaattn 515  Q
    ||||||||||||||||||| | |||||||| ||||| |||||||||||||||||||||||||||||||||||||||||| || ||||| ||||| ||||     
T  4340417 aaatttagtgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaaggaatttgtgaggaatttcattttttccgtcactaattt 4340516  T
Q  516 ccctccctaattttgcnttt 535  Q
    ||||  |||||||||| |||    
T  4340517 cccttgctaattttgctttt 4340536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 76; E-Value: 7e-35
Query Start/End: Original strand, 400 - 520
Target Start/End: Complemental strand, 41071980 - 41071860
Alignment:
Q  400 caaaagttagtgagggaaatttagtgagggaaaacatgaaatccctttctaantccgtcactaaattttgcgaccaaggaatttgtgaggaattttatgt 499  Q
    ||||| ||||||||||||||||||||||||||||| | |||||||| ||||| |||||||||||||||||||||||| ||||||||||||||||| || |    
T  41071980 caaaaattagtgagggaaatttagtgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgaggaatttcattt 41071881  T
Q  500 tttctgtcacnaattnccctc 520  Q
    | || ||||| |||| |||||    
T  41071880 tctccgtcactaatttccctc 41071860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 410 - 535
Target Start/End: Complemental strand, 46339580 - 46339455
Alignment:
Q  410 tgagggaaatttagtgagggaaaacatgaaatccctttctaantccgtcactaaattttgcgaccaaggaatttgtgaggaattttatgttttctgtcac 509  Q
    ||||||| ||||||| ||||||||||||||||| || ||||| ||||||||||||||||||||| |||||||||||||||||||| || ||||| |||||    
T  46339580 tgagggatatttagtaagggaaaacatgaaatctctctctaattccgtcactaaattttgcgactaaggaatttgtgaggaatttcattttttccgtcac 46339481  T
Q  510 naattnccctccctaattttgcnttt 535  Q
     ||||  |||| |||||||||| |||    
T  46339480 taattttcctcgctaattttgctttt 46339455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 400 - 529
Target Start/End: Original strand, 12161808 - 12161937
Alignment:
Q  400 caaaagttagtgagggaaatttagtgagggaaaacatgaaatccctttctaantccgtcactaaattttgcgaccaaggaatttgtgaggaattttatgt 499  Q
    ||||| |||||||||||||||| |||||||||||| |||||||||| ||||| ||||||||||||||||||||||| | |||||||||||||||| || |    
T  12161808 caaaaattagtgagggaaattttgtgagggaaaacgtgaaatccctctctaattccgtcactaaattttgcgaccatgaaatttgtgaggaatttcattt 12161907  T
Q  500 tttctgtcacnaattnccctccctaatttt 529  Q
    |||| ||||  ||||  |||| ||||||||    
T  12161908 tttccgtcaataattttcctcgctaatttt 12161937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 400 - 529
Target Start/End: Original strand, 19081722 - 19081851
Alignment:
Q  400 caaaagttagtgagggaaatttagtgagggaaaacatgaaatccctttctaantccgtcactaaattttgcgaccaaggaatttgtgaggaattttatgt 499  Q
    ||||| |||||||||||| ||||| |||||||||| |||||||||| ||||| || ||||||||||||| ||||||||||||||||||| |||||||| |    
T  19081722 caaaaattagtgagggaattttagagagggaaaacgtgaaatccctctctaattctgtcactaaattttacgaccaaggaatttgtgagaaattttattt 19081821  T
Q  500 tttctgtcacnaattnccctccctaatttt 529  Q
    ||||  |||| |||| ||||| ||||||||    
T  19081822 tttccatcactaatttccctctctaatttt 19081851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 400 - 529
Target Start/End: Original strand, 19129610 - 19129739
Alignment:
Q  400 caaaagttagtgagggaaatttagtgagggaaaacatgaaatccctttctaantccgtcactaaattttgcgaccaaggaatttgtgaggaattttatgt 499  Q
    ||||| |||||||||||| ||||| |||||||||| |||||||||| ||||| || ||||||||||||| ||||||||||||||||||| |||||||| |    
T  19129610 caaaaattagtgagggaattttagagagggaaaacgtgaaatccctctctaattctgtcactaaattttacgaccaaggaatttgtgagaaattttattt 19129709  T
Q  500 tttctgtcacnaattnccctccctaatttt 529  Q
    ||||  |||| |||| ||||| ||||||||    
T  19129710 tttccatcactaatttccctctctaatttt 19129739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 420 - 529
Target Start/End: Original strand, 19865258 - 19865367
Alignment:
Q  420 ttagtgagggaaaacatgaaatccctttctaantccgtcactaaattttgcgaccaaggaatttgtgaggaattttatgttttctgtcacnaattnccct 519  Q
    |||||||||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||||| ||||| || ||||| ||||| ||||  |||    
T  19865258 ttagtgagggaaaacatgaaatccctctctaattccgtcactaaattttgcgaccaaggaatttgtgagaaatttcattttttccgtcactaattttcct 19865357  T
Q  520 ccctaatttt 529  Q
    | ||||||||    
T  19865358 cgctaatttt 19865367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 400 - 529
Target Start/End: Original strand, 23457891 - 23458020
Alignment:
Q  400 caaaagttagtgagggaaatttagtgagggaaaacatgaaatccctttctaantccgtcactaaattttgcgaccaaggaatttgtgaggaattttatgt 499  Q
    ||||| |||||||||||||||| |||||||||||| |||||||||| ||||| ||||||||||||||||||||||| | |||||||||||||||| || |    
T  23457891 caaaaattagtgagggaaattttgtgagggaaaacgtgaaatccctctctaattccgtcactaaattttgcgaccatgaaatttgtgaggaatttcattt 23457990  T
Q  500 tttctgtcacnaattnccctccctaatttt 529  Q
    |||| ||||  ||||  |||| ||||||||    
T  23457991 tttccgtcaataattttcctcgctaatttt 23458020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 400 - 535
Target Start/End: Original strand, 17661044 - 17661179
Alignment:
Q  400 caaaagttagtgagggaaatttagtgagggaaaacatgaaatccctttctaantccgtcactaaattttgcgaccaaggaatttgtgaggaattttatgt 499  Q
    ||||| |||||||||||||||| |||||||||||| |||||| ||| ||||| ||| ||||||||||||||||||| | ||||||||||||||||||| |    
T  17661044 caaaaattagtgagggaaattttgtgagggaaaacgtgaaattcctctctaattccatcactaaattttgcgaccatgaaatttgtgaggaattttattt 17661143  T
Q  500 tttctgtcacnaattnccctccctaattttgcnttt 535  Q
    |||| ||||| |||| || ||  ||||||||| |||    
T  17661144 tttccgtcactaatttccgtcgttaattttgctttt 17661179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 400 - 535
Target Start/End: Original strand, 22603542 - 22603677
Alignment:
Q  400 caaaagttagtgagggaaatttagtgagggaaaacatgaaatccctttctaantccgtcactaaattttgcgaccaaggaatttgtgaggaattttatgt 499  Q
    ||||| ||||||||||||||||||||||||||||| | ||||| || ||||| |||||||||||||||||||| ||| ||||||||||||||||| || |    
T  22603542 caaaaattagtgagggaaatttagtgagggaaaacgtaaaatcgctctctaattccgtcactaaattttgcgatcaaagaatttgtgaggaatttcattt 22603641  T
Q  500 tttctgtcacnaattnccctccctaattttgcnttt 535  Q
    ||||  |||| |||| ||||  |||||||||| |||    
T  22603642 tttccatcactaatttcccttgctaattttgctttt 22603677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 420 - 535
Target Start/End: Complemental strand, 28229580 - 28229465
Alignment:
Q  420 ttagtgagggaaaacatgaaatccctttctaantccgtcactaaattttgcgaccaaggaatttgtgaggaattttatgttttctgtcacnaattnccct 519  Q
    ||||||||||||||| | |||||||| ||||| ||| |||||||||||||||||||||||||||||||||||||| || ||||| ||||| |||| ||||    
T  28229580 ttagtgagggaaaacgtaaaatccctctctaattccatcactaaattttgcgaccaaggaatttgtgaggaatttcattttttccgtcactaatttccct 28229481  T
Q  520 ccctaattttgcnttt 535  Q
    | |||||||||| |||    
T  28229480 cgctaattttgctttt 28229465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 416 - 535
Target Start/End: Complemental strand, 41120866 - 41120747
Alignment:
Q  416 aaatttagtgagggaaaacatgaaatccctttctaantccgtcactaaattttgcgaccaaggaatttgtgaggaattttatgttttctgtcacnaattn 515  Q
    ||||||||||||||||||| | |||||||| ||||| ||||||||||||||||||||||||| |||||||||||||||| || |||||  |||| ||||     
T  41120866 aaatttagtgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaagaaatttgtgaggaatttcattttttccatcactaattt 41120767  T
Q  516 ccctccctaattttgcnttt 535  Q
    ||||| |||||||||| |||    
T  41120766 ccctcgctaattttgctttt 41120747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 420 - 535
Target Start/End: Original strand, 46790014 - 46790129
Alignment:
Q  420 ttagtgagggaaaacatgaaatccctttctaantccgtcactaaattttgcgaccaaggaatttgtgaggaattttatgttttctgtcacnaattnccct 519  Q
    ||||||||||||||| | |||||||||||||| ||||||| |||||||||||||||| ||||||||||||||||| || ||||| ||||| |||| ||||    
T  46790014 ttagtgagggaaaacgtaaaatccctttctaattccgtcattaaattttgcgaccaaagaatttgtgaggaatttcattttttccgtcactaatttccct 46790113  T
Q  520 ccctaattttgcnttt 535  Q
    | |||||||||| |||    
T  46790114 cgctaattttgctttt 46790129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 401 - 535
Target Start/End: Original strand, 48522513 - 48522647
Alignment:
Q  401 aaaagttagtgagggaaatttagtgagggaaaacatgaaatccctttctaantccgtcactaaattttgcgaccaaggaatttgtgaggaattttatgtt 500  Q
    |||| ||||||||||| || ||||||||||||||||||||| ||| |  || ||||||||||||||||||||||||  |||||||||| |||||||| ||    
T  48522513 aaaaattagtgagggatatgtagtgagggaaaacatgaaattcctcttaaattccgtcactaaattttgcgaccaaaaaatttgtgagaaattttatttt 48522612  T
Q  501 ttctgtcacnaattnccctccctaattttgcnttt 535  Q
    ||||||||| ||||  |||| |||||||||| |||    
T  48522613 ttctgtcactaattttcctcgctaattttgctttt 48522647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 406 - 535
Target Start/End: Original strand, 29549418 - 29549547
Alignment:
Q  406 ttagtgagggaaatttagtgagggaaaacatgaaatccctttctaantccgtcactaaattttgcgaccaaggaatttgtgaggaattttatgttttctg 505  Q
    ||||||||||||||||||||||||||||| | |||||||| ||||| ||||||||||||||| ||||| ||  |||||||||| |||||||| ||||  |    
T  29549418 ttagtgagggaaatttagtgagggaaaacgtaaaatccctctctaattccgtcactaaatttcgcgactaaaaaatttgtgagaaattttatttttttcg 29549517  T
Q  506 tcacnaattnccctccctaattttgcnttt 535  Q
    |||| |||| ||||| |||||||||| |||    
T  29549518 tcactaatttccctcgctaattttgctttt 29549547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 400 - 535
Target Start/End: Original strand, 12989846 - 12989981
Alignment:
Q  400 caaaagttagtgagggaaatttagtgagggaaaacatgaaatccctttctaantccgtcactaaattttgcgaccaaggaatttgtgaggaattttatgt 499  Q
    ||||| |||||||||||||||| | |||||||||| ||||||| ||  |||| || ||||||||| ||||||||||||||||||||||| |||||||| |    
T  12989846 caaaaattagtgagggaaattttgagagggaaaacgtgaaatctctccctaattcagtcactaaactttgcgaccaaggaatttgtgagaaattttattt 12989945  T
Q  500 tttctgtcacnaattnccctccctaattttgcnttt 535  Q
    |||| ||||| |||| | ||| |||||||||| |||    
T  12989946 tttccgtcaccaatttctctctctaattttgctttt 12989981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 416 - 535
Target Start/End: Complemental strand, 46786087 - 46785968
Alignment:
Q  416 aaatttagtgagggaaaacatgaaatccctttctaantccgtcactaaattttgcgaccaaggaatttgtgaggaattttatgttttctgtcacnaattn 515  Q
    ||||||||||||||||||| | |||||||| ||||| ||||||| |||||||||||||||||||| ||||||| ||||| || ||||| ||||| ||||     
T  46786087 aaatttagtgagggaaaacgtaaaatccctctctaattccgtcattaaattttgcgaccaaggaacttgtgagaaatttcattttttccgtcactaattt 46785988  T
Q  516 ccctccctaattttgcnttt 535  Q
    ||||| |||||||||| |||    
T  46785987 ccctcgctaattttgctttt 46785968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 401 - 535
Target Start/End: Complemental strand, 18890693 - 18890559
Alignment:
Q  401 aaaagttagtgagggaaatttagtgagggaaaacatgaaatccctttctaantccgtcactaaattttgcgaccaaggaatttgtgaggaattttatgtt 500  Q
    |||| |||||||||||||||| ||||| |||||| |||||||||| ||||| ||||| |||||||||||||||||   |||||||||||||||| || ||    
T  18890693 aaaaattagtgagggaaattttgtgagagaaaacgtgaaatccctctctaattccgttactaaattttgcgaccattaaatttgtgaggaatttcatttt 18890594  T
Q  501 ttctgtcacnaattnccctccctaattttgcnttt 535  Q
    |||  |||| |||| ||||| |||||||||| |||    
T  18890593 ttccatcactaatttccctcgctaattttgctttt 18890559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 406 - 535
Target Start/End: Complemental strand, 7181694 - 7181565
Alignment:
Q  406 ttagtgagggaaatttagtgagggaaaacatgaaatccctttctaantccgtcactaaattttgcgaccaaggaatttgtgaggaattttatgttttctg 505  Q
    |||||||||||||||| || ||||||||| |||||||||| ||||| ||||||||||||||||| ||||| | ||| ||||||||||||| | ||||| |    
T  7181694 ttagtgagggaaattttgtaagggaaaacgtgaaatccctctctaattccgtcactaaattttgtgaccatgaaatatgtgaggaattttcttttttccg 7181595  T
Q  506 tcacnaattnccctccctaattttgcnttt 535  Q
    |||| |||| ||||  |||||||||| |||    
T  7181594 tcactaatttcccttgctaattttgctttt 7181565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 400 - 530
Target Start/End: Complemental strand, 9985472 - 9985342
Alignment:
Q  400 caaaagttagtgagggaaatttagtgagggaaaacatgaaatccctttctaantccgtcactaaattttgcgaccaaggaatttgtgaggaattttatgt 499  Q
    ||||| |||||||||||||||| |||||| ||||| | |||||||| ||||| ||||||| |||||||| ||||||| ||||||||||||||||| || |    
T  9985472 caaaaattagtgagggaaattttgtgaggaaaaacgtaaaatccctctctaattccgtcaataaattttacgaccaaagaatttgtgaggaatttgattt 9985373  T
Q  500 tttctgtcacnaattnccctccctaattttg 530  Q
    |||| ||||| |||| ||||  |||||||||    
T  9985372 tttccgtcactaatttcccttgctaattttg 9985342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 400 - 530
Target Start/End: Complemental strand, 17200155 - 17200025
Alignment:
Q  400 caaaagttagtgagggaaatttagtgagggaaaacatgaaatccctttctaantccgtcactaaattttgcgaccaaggaatttgtgaggaattttatgt 499  Q
    ||||| ||||||||||||||||||||||| |||| || |||| | | | ||| |||||||||||||||||||||||| ||||||||||||||||| || |    
T  17200155 caaaaattagtgagggaaatttagtgaggaaaaatataaaattcttctttaattccgtcactaaattttgcgaccaatgaatttgtgaggaatttcattt 17200056  T
Q  500 tttctgtcacnaattnccctccctaattttg 530  Q
    |||| |||||  ||| ||||| |||||||||    
T  17200055 tttccgtcactgatttccctcgctaattttg 17200025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 400 - 537
Target Start/End: Complemental strand, 30928523 - 30928386
Alignment:
Q  400 caaaagttagtgagggaaatttagtgagggaaaacatgaaatccctttctaantccgtcactaaattttgcgaccaaggaatttgtgaggaattttatgt 499  Q
    ||||| ||||||||| ||||||| |||| |||||||||||||  || ||||| ||  ||||||||||||||||||||||||||||| ||  ||||||| |    
T  30928523 caaaaattagtgaggaaaatttactgagtgaaaacatgaaatttctctctaattctctcactaaattttgcgaccaaggaatttgttagagattttattt 30928424  T
Q  500 tttctgtcacnaattnccctccctaattttgcntttcc 537  Q
    |||| ||||| |||| ||||| |||||||||| |||||    
T  30928423 tttccgtcactaatttccctctctaattttgcttttcc 30928386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 415 - 529
Target Start/End: Complemental strand, 50092428 - 50092314
Alignment:
Q  415 gaaatttagtgagggaaaacatgaaatccctttctaantccgtcactaaattttgcgaccaaggaatttgtgaggaattttatgttttctgtcacnaatt 514  Q
    ||||||| ||||||||||||||||||||||| ||||| ||||||||||||||||| || || | |||||||||||||||| || ||||| ||||| ||||    
T  50092428 gaaattttgtgagggaaaacatgaaatccctctctaattccgtcactaaattttgtgatcatgaaatttgtgaggaatttcattttttccgtcactaatt 50092329  T
Q  515 nccctccctaatttt 529  Q
     ||||| ||||||||    
T  50092328 tccctcgctaatttt 50092314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 400 - 503
Target Start/End: Complemental strand, 13523106 - 13523003
Alignment:
Q  400 caaaagttagtgagggaaatttagtgagggaaaacatgaaatccctttctaantccgtcactaaattttgcgaccaaggaatttgtgaggaattttatgt 499  Q
    ||||| |||||||||||| ||||| |||||||||| |||||||||| ||||| |||||||||||||||||||||||| ||||||||||| |||| ||| |    
T  13523106 caaaaattagtgagggaattttagagagggaaaacgtgaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgagaaattatattt 13523007  T
Q  500 tttc 503  Q
    ||||    
T  13523006 tttc 13523003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 400 - 529
Target Start/End: Original strand, 46865237 - 46865366
Alignment:
Q  400 caaaagttagtgagggaaatttagtgagggaaaacatgaaatccctttctaantccgtcactaaattttgcgaccaaggaatttgtgaggaattttatgt 499  Q
    ||||| ||||||||||||||| || |||||| ||| |||||||||| ||||| ||| | ||||||||||||| ||||| ||||||||||| ||||||| |    
T  46865237 caaaaattagtgagggaaattcagagagggagaacgtgaaatccctctctaattccattactaaattttgcggccaagaaatttgtgagggattttattt 46865336  T
Q  500 tttctgtcacnaattnccctccctaatttt 529  Q
    |||| ||||| |||| ||||||||| ||||    
T  46865337 tttccgtcactaatttccctccctagtttt 46865366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 406 - 530
Target Start/End: Complemental strand, 9259322 - 9259198
Alignment:
Q  406 ttagtgagggaaatttagtgagggaaaacatgaaatccctttctaantccgtcactaaattttgcgaccaaggaatttgtgaggaattttatgttttctg 505  Q
    |||||||||||||||| |||||||||||| ||||||| || ||||| ||||||||||||||||||||||| | |||||||||| |||||| | ||||| |    
T  9259322 ttagtgagggaaattttgtgagggaaaacgtgaaatctctctctaattccgtcactaaattttgcgaccatgaaatttgtgagaaattttcttttttccg 9259223  T
Q  506 tcacnaattnccctccctaattttg 530  Q
    |||| ||||  ||||  ||||||||    
T  9259222 tcactaattttcctcgttaattttg 9259198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 400 - 537
Target Start/End: Complemental strand, 17734099 - 17733961
Alignment:
Q  400 caaaagttagtgagggaaatttagtgagggaaaacatgaaatccctttctaantccgtcactaaa-ttttgcgaccaaggaatttgtgaggaattttatg 498  Q
    ||||| ||||||||||||||||||||||||||||||||||||| ||  |||| ||| ||| |||| ||||||||||||| ||||||||||  |||||||     
T  17734099 caaaaattagtgagggaaatttagtgagggaaaacatgaaatctctcgctaattccatcattaaatttttgcgaccaagaaatttgtgagagattttatc 17734000  T
Q  499 ttttctgtcacnaattnccctccctaattttgcntttcc 537  Q
    ||||| ||||| || |   |||||||||||||| |||||    
T  17733999 ttttccgtcactaaattttctccctaattttgcttttcc 17733961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 406 - 514
Target Start/End: Original strand, 32046876 - 32046984
Alignment:
Q  406 ttagtgagggaaatttagtgagggaaaacatgaaatccctttctaantccgtcactaaattttgcgaccaaggaatttgtgaggaattttatgttttctg 505  Q
    |||||||||||||| |||||||||||||| | ||||| || ||||| |||| |||||||||||||||||||| |||||||||||||||| || ||||| |    
T  32046876 ttagtgagggaaatatagtgagggaaaacgtaaaatctctctctaattccgacactaaattttgcgaccaagaaatttgtgaggaatttcattttttccg 32046975  T
Q  506 tcacnaatt 514  Q
    |||| ||||    
T  32046976 tcactaatt 32046984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 420 - 530
Target Start/End: Complemental strand, 13308945 - 13308835
Alignment:
Q  420 ttagtgagggaaaacatgaaatccctttctaantccgtcactaaattttgcgaccaaggaatttgtgaggaattttatgttttctgtcacnaattnccct 519  Q
    ||||||||| |||||||||||||||| ||||| | | ||||||||||||||||||||  ||||||||||||||||||| ||||| | ||| |||| ||||    
T  13308945 ttagtgaggaaaaacatgaaatccctctctaatttcatcactaaattttgcgaccaataaatttgtgaggaattttattttttcggacactaatttccct 13308846  T
Q  520 ccctaattttg 530  Q
    | |||||||||    
T  13308845 ctctaattttg 13308835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 400 - 514
Target Start/End: Original strand, 41063191 - 41063305
Alignment:
Q  400 caaaagttagtgagggaaatttagtgagggaaaacatgaaatccctttctaantccgtcactaaattttgcgaccaaggaatttgtgaggaattttatgt 499  Q
    ||||| ||||||||| ||||||||||||| ||||||| ||||| || ||||| |||||||||||||||||||| ||| |||| ||||||| ||||||| |    
T  41063191 caaaaattagtgaggaaaatttagtgaggaaaaacataaaatctctctctaattccgtcactaaattttgcgatcaaagaatatgtgagggattttattt 41063290  T
Q  500 tttctgtcacnaatt 514  Q
    |||| ||||| ||||    
T  41063291 tttccgtcactaatt 41063305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 437 - 535
Target Start/End: Complemental strand, 25788105 - 25788007
Alignment:
Q  437 gaaatccctttctaantccgtcactaaattttgcgaccaaggaatttgtgaggaattttatgttttctgtcacnaattnccctccctaattttgcnttt 535  Q
    ||||||||| ||||| ||||||||||||||||||||||| ||||||||||||||||||| | ||||| ||||| ||||  |||| |||||||||| |||    
T  25788105 gaaatccctctctaattccgtcactaaattttgcgaccatggaatttgtgaggaattttcttttttccgtcactaattttcctcgctaattttgctttt 25788007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 416 - 530
Target Start/End: Original strand, 9177110 - 9177224
Alignment:
Q  416 aaatttagtgagggaaaacatgaaatccctttctaantccgtcactaaattttgcgaccaaggaatttgtgaggaattttatgttttctgtcacnaattn 515  Q
    ||||||||||||| ||||| | |||||||| | ||| | ||||||||||||||||||||||| |||||||||||||||| || ||||| || || ||||     
T  9177110 aaatttagtgaggaaaaacgtaaaatccctctttaatttcgtcactaaattttgcgaccaagaaatttgtgaggaatttcattttttccgttactaattt 9177209  T
Q  516 ccctccctaattttg 530  Q
    ||||| |||||||||    
T  9177210 ccctcgctaattttg 9177224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 400 - 483
Target Start/End: Complemental strand, 12370086 - 12370003
Alignment:
Q  400 caaaagttagtgagggaaatttagtgagggaaaacatgaaatccctttctaantccgtcactaaattttgcgaccaaggaattt 483  Q
    ||||| ||||||||||||||||||| ||||||||||| |||||| | ||||| |||||||||||||||||||||||| ||||||    
T  12370086 caaaaattagtgagggaaatttagtaagggaaaacataaaatccttctctaattccgtcactaaattttgcgaccaaagaattt 12370003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 420 - 535
Target Start/End: Complemental strand, 8941119 - 8941004
Alignment:
Q  420 ttagtgagggaaaacatgaaatccctttctaantccgtcactaaattttgcgaccaaggaatttgtgaggaattttatgttttctgtcacnaattnccct 519  Q
    ||||||||||||||| | |||| ||| ||||| |||||| ||||||||| ||| ||||||||||||||| ||||| || ||||| ||||| |||| ||||    
T  8941119 ttagtgagggaaaacgtaaaattcctctctaattccgtcgctaaattttacgatcaaggaatttgtgagaaatttcattttttccgtcactaatttccct 8941020  T
Q  520 ccctaattttgcnttt 535  Q
    | |||||||||| |||    
T  8941019 cgctaattttgctttt 8941004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 400 - 535
Target Start/End: Original strand, 13195577 - 13195712
Alignment:
Q  400 caaaagttagtgagggaaatttagtgagggaaaacatgaaatccctttctaantccgtcactaaattttgcgaccaaggaatttgtgaggaattttatgt 499  Q
    ||||| || ||||||||||||||| |||||||||    |||||||| ||||| || |||||||||||||||| || ||||||| |||||||||||||  |    
T  13195577 caaaaatttgtgagggaaatttagagagggaaaatgcaaaatccctctctaattctgtcactaaattttgcgtcccaggaattcgtgaggaattttaact 13195676  T
Q  500 tttctgtcacnaattnccctccctaattttgcnttt 535  Q
    ||||  |||| |||  |||||||||||||||| |||    
T  13195677 tttccatcactaatctccctccctaattttgcattt 13195712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 420 - 509
Target Start/End: Original strand, 41359001 - 41359091
Alignment:
Q  420 ttagtgagggaaaacatgaaa-tccctttctaantccgtcactaaattttgcgaccaaggaatttgtgaggaattttatgttttctgtcac 509  Q
    ||||||||||||||||| ||| ||||| ||||| |||||||||||||||||||||||| ||||||||||||||||| || ||||| |||||    
T  41359001 ttagtgagggaaaacataaaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgaggaatttcattttttccgtcac 41359091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 400 - 537
Target Start/End: Original strand, 11917780 - 11917916
Alignment:
Q  400 caaaagttagtgagggaaatttagtgagggaaaacatgaaatccctttctaantccgtcactaaattttgcgaccaaggaatttgtgaggaattttatgt 499  Q
    ||||| ||||||||  || ||||| |||||||||| |||| ||||||||||| ||||||||||||||||||||||||  ||||||||||  ||||| | |    
T  11917780 caaaaattagtgagataagtttagagagggaaaacgtgaactccctttctaattccgtcactaaattttgcgaccaaataatttgtgagatattttgttt 11917879  T
Q  500 tttctgtcacnaattnccctccctaattttgcntttcc 537  Q
    |||| |||||  ||| ||||| |||||||| | |||||    
T  11917880 tttc-gtcactgatttccctctctaatttttcttttcc 11917916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 410 - 535
Target Start/End: Original strand, 51973428 - 51973553
Alignment:
Q  410 tgagggaaatttagtgagggaaaacatgaaatccctttctaantccgtcactaaattttgcgaccaaggaatttgtgaggaattttatgttttctgtcac 509  Q
    |||||||||||| |||||||||||  ||||||  || ||||| |||||||||||||||||||||||  || ||| |||||||||| || ||||| || ||    
T  51973428 tgagggaaattttgtgagggaaaatgtgaaatttctctctaattccgtcactaaattttgcgaccatagattttatgaggaatttcattttttccgttac 51973527  T
Q  510 naattnccctccctaattttgcnttt 535  Q
     |||| ||||| |||||||||| |||    
T  51973528 taatttccctcgctaattttgctttt 51973553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 400 - 529
Target Start/End: Complemental strand, 20290465 - 20290337
Alignment:
Q  400 caaaagttagtgagggaaatttagtgagggaaaacatgaaatccctttctaantccgtcactaaattttgcgaccaaggaatttgtgaggaattttatgt 499  Q
    ||||| |||||||| ||||||| ||||| |||||| |||||||  | ||||| |||||||||||||||| || ||| | |||||||||||||||| || |    
T  20290465 caaaaattagtgagagaaattttgtgagagaaaacgtgaaatcattctctaattccgtcactaaattttacggccatgaaatttgtgaggaatttcat-t 20290367  T
Q  500 tttctgtcacnaattnccctccctaatttt 529  Q
    |||| ||||| |||| ||||| ||||||||    
T  20290366 tttccgtcactaatttccctcgctaatttt 20290337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 420 - 537
Target Start/End: Complemental strand, 12806963 - 12806844
Alignment:
Q  420 ttagtgagggaaaa-catgaaatccctttctaantccgtcactaaattttgcgaccaaggaatttgtgag-gaattttatgttttctgtcacnaattncc 517  Q
    |||||||||||||| | |||||||||| | ||| |||||||||||||||| |||||||| |||||||||| || || | | ||||||||||| |||| ||    
T  12806963 ttagtgagggaaaaacttgaaatccctctataattccgtcactaaattttacgaccaagaaatttgtgagagatttattttttttctgtcactaatttcc 12806864  T
Q  518 ctccctaattttgcntttcc 537  Q
    ||||||||| |||| |||||    
T  12806863 ctccctaatattgcttttcc 12806844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 447 - 529
Target Start/End: Complemental strand, 27253953 - 27253871
Alignment:
Q  447 tctaantccgtcactaaattttgcgaccaaggaatttgtgaggaattttatgttttctgtcacnaattnccctccctaatttt 529  Q
    ||||| ||||||||||||||||||||||| |||||||||||| |||||||| ||||| ||||  ||||  |||||||||||||    
T  27253953 tctaattccgtcactaaattttgcgaccatggaatttgtgagaaattttattttttccgtcattaattttcctccctaatttt 27253871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 401 - 529
Target Start/End: Original strand, 20580904 - 20581033
Alignment:
Q  401 aaaagttagtgagggaaatttagtgagggaaaacatgaaatccctttctaantccgtcactaaattttgcgaccaaggaatttgtgaggaatttta-tgt 499  Q
    |||| |||||||| ||| ||||| |||||||||| |||||||||| ||||| | ||| | ||||||||||||| |||||||||||||| ||||| | | |    
T  20580904 aaaaattagtgagagaattttagagagggaaaacgtgaaatccctctctaatttcgtaattaaattttgcgactaaggaatttgtgagaaatttaatttt 20581003  T
Q  500 tttctgtcacnaattnccctccctaatttt 529  Q
    ||||  |||| |||| ||||| ||||||||    
T  20581004 tttccatcactaatttccctctctaatttt 20581033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 400 - 497
Target Start/End: Complemental strand, 16258631 - 16258534
Alignment:
Q  400 caaaagttagtgagggaaatttagtgagggaaaacatgaaatccctttctaantccgtcactaaattttgcgaccaaggaatttgtgaggaattttat 497  Q
    ||||| ||||||||| |||||||| |||| ||||| ||||| |||| | ||| |||||||||||||||||| |||||||||| ||||||  |||||||    
T  16258631 caaaaattagtgaggaaaatttagagaggaaaaacgtgaaaaccctctataattccgtcactaaattttgcaaccaaggaatctgtgagatattttat 16258534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #64
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 400 - 535
Target Start/End: Complemental strand, 18788055 - 18787923
Alignment:
Q  400 caaaagttagtgagggaaatttagtgagggaaaacatgaaatccctttctaantccgtcactaaattttgcgaccaaggaatttgtgaggaattttatgt 499  Q
    ||||| |||||||||||||||||  |||||||||| ||| |||  | ||||| |  |||||||||||||||||||||  |||||  |||| ||||||| |    
T  18788055 caaaaattagtgagggaaatttaaagagggaaaacgtgacatcaatctctaatt--gtcactaaattttgcgaccaaaaaatttaggagggattttattt 18787958  T
Q  500 tttctgtcacnaattnccctccctaattttgcnttt 535  Q
    |||| ||||| |||| || ||||||||||||| |||    
T  18787957 tttc-gtcactaatttccatccctaattttgctttt 18787923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #65
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 412 - 514
Target Start/End: Original strand, 26825246 - 26825348
Alignment:
Q  412 agggaaatttagtgagggaaaacatgaaatccctttctaantccgtcactaaattttgcgaccaaggaatttgtgaggaattttatgttttctgtcacna 511  Q
    |||||| ||||| |||||||||| |||||| ||| ||||| |||||||||||||||| ||| ||| |||||||||||| |  |||| ||||| ||||| |    
T  26825246 agggaattttagagagggaaaacgtgaaattcctctctaattccgtcactaaattttacgatcaaagaatttgtgagggaagttattttttccgtcacta 26825345  T
Q  512 att 514  Q
    |||    
T  26825346 att 26825348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #66
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 401 - 503
Target Start/End: Complemental strand, 29093698 - 29093596
Alignment:
Q  401 aaaagttagtgagggaaatttagtgagggaaaacatgaaatccctttctaantccgtcactaaattttgcgaccaaggaatttgtgaggaattttatgtt 500  Q
    |||| |||||||||||||||||| || ||||||  | |||| ||| ||||| ||| ||| ||||||||||||  |||||| |||||||||||||||| ||    
T  29093698 aaaaattagtgagggaaatttagagatggaaaatgtaaaattcctctctaattccatcattaaattttgcgattaaggaacttgtgaggaattttatttt 29093599  T
Q  501 ttc 503  Q
    |||    
T  29093598 ttc 29093596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #67
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 420 - 514
Target Start/End: Complemental strand, 9882162 - 9882071
Alignment:
Q  420 ttagtgagggaaaacatgaaatccctttctaantccgtcactaaattttgcgaccaaggaatttgtgaggaattttatgttttctgtcacnaatt 514  Q
    ||||||||| ||||||| |||| ||| ||||| |||||||||||||||||||   ||| ||||||||||| ||||||| ||||| ||||| ||||    
T  9882162 ttagtgaggaaaaacattaaattcctctctaattccgtcactaaattttgcg---aagaaatttgtgagggattttattttttccgtcactaatt 9882071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #68
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 416 - 537
Target Start/End: Original strand, 39748943 - 39749064
Alignment:
Q  416 aaatttagtgagggaaaacatgaaatccctttctaantccgtcactaaattttgcgaccaaggaatttgtgaggaattttatgttttctgtcacnaattn 515  Q
    ||||||||||| |||||||||||||||||  || || | |||||||||||||||||| |||  || ||| |||  ||||| | ||||| ||||| ||||     
T  39748943 aaatttagtgaaggaaaacatgaaatccccctcaaatttcgtcactaaattttgcgatcaaacaaattgcgagagatttttttttttccgtcactaattt 39749042  T
Q  516 ccctccctaattttgcntttcc 537  Q
    | |||| ||||||||| |||||    
T  39749043 cgctccttaattttgcttttcc 39749064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #69
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 420 - 537
Target Start/End: Original strand, 49881058 - 49881174
Alignment:
Q  420 ttagtgagggaaaacatgaaatccctttctaantccgtcactaaattttgcgaccaaggaatttgtgaggaattttatgttttctgtcacnaattnccct 519  Q
    ||||||||||| |||||||||||||| |||||  | || ||||||||||| ||||||||||||| |||   ||||||| ||||| ||||| || |  |||    
T  49881058 ttagtgagggataacatgaaatccctctctaatcctgttactaaattttgtgaccaaggaatttatgaaagattttattttttccgtcactaactttcct 49881157  T
Q  520 ccctaattttgcntttcc 537  Q
     ||||||||||| |||||    
T  49881158 -cctaattttgcatttcc 49881174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #70
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 400 - 535
Target Start/End: Original strand, 6775881 - 6776015
Alignment:
Q  400 caaaagttagtgagggaaatttagtgagggaaaacatgaaatccctttctaantccgtcactaaattttgcgaccaaggaatttgtgaggaattttatgt 499  Q
    ||||| ||| |||| |||||||||||||  ||||| | |||| ||| ||||| |||||  |||| |||||| ||||| |||||||||||| ||||||| |    
T  6775881 caaaaattaatgagagaaatttagtgagaaaaaacttaaaattcctctctaattccgttgctaagttttgcaaccaaagaatttgtgagggattttattt 6775980  T
Q  500 tttctgtcacnaattnccctccctaattttgcnttt 535  Q
    ||||  ||||  ||| ||||| |||||||||| |||    
T  6775981 tttccatcact-atttccctctctaattttgctttt 6776015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #71
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 421 - 494
Target Start/End: Complemental strand, 45919028 - 45918955
Alignment:
Q  421 tagtgagggaaaacatgaaatccctttctaantccgtcactaaattttgcgaccaaggaatttgtgaggaattt 494  Q
    |||||||||| ||||| |||||||| ||||| || || |||||||||||| |||||||||||| ||||| ||||    
T  45919028 tagtgagggataacatcaaatccctctctaattctgttactaaattttgcaaccaaggaatttatgagggattt 45918955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #72
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 416 - 497
Target Start/End: Original strand, 30673504 - 30673585
Alignment:
Q  416 aaatttagtgagggaaaacatgaaatccctttctaantccgtcactaaattttgcgaccaaggaatttgtgaggaattttat 497  Q
    |||||||||||||||||||||||||||||| ||||| ||  | ||||||||||  || |||  ||||||||| | |||||||    
T  30673504 aaatttagtgagggaaaacatgaaatccctctctaattctattactaaattttatgagcaaaaaatttgtgaaggattttat 30673585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #73
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 400 - 468
Target Start/End: Original strand, 52621148 - 52621216
Alignment:
Q  400 caaaagttagtgagggaaatttagtgagggaaaacatgaaatccctttctaantccgtcactaaatttt 468  Q
    ||||| ||||||||| ||||||||||||| |||||||||||| | |  |||| ||| ||||||||||||    
T  52621148 caaaaattagtgaggaaaatttagtgaggaaaaacatgaaattcttcactaattccatcactaaatttt 52621216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #74
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 415 - 470
Target Start/End: Complemental strand, 25687410 - 25687355
Alignment:
Q  415 gaaatttagtgagggaaaacatgaaatccctttctaantccgtcactaaattttgc 470  Q
    ||||||||| || ||||||||| | |||||| ||||| ||| ||||||||||||||    
T  25687410 gaaatttagagaaggaaaacattacatccctctctaattccttcactaaattttgc 25687355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 103; Significance: 5e-51; HSPs: 63)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 103; E-Value: 5e-51
Query Start/End: Original strand, 401 - 535
Target Start/End: Complemental strand, 17824760 - 17824626
Alignment:
Q  401 aaaagttagtgagggaaatttagtgagggaaaacatgaaatccctttctaantccgtcactaaattttgcgaccaaggaatttgtgaggaattttatgtt 500  Q
    |||| |||||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||||||||||||| |||||||||||||||||||||||    
T  17824760 aaaaattagtgagggaaatttagtgagggaaaacatgaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgaggaattttatgtt 17824661  T
Q  501 ttctgtcacnaattnccctccctaattttgcnttt 535  Q
    ||| ||||| |||| ||||| |||||||||| |||    
T  17824660 ttccgtcacaaatttccctctctaattttgctttt 17824626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 98; E-Value: 5e-48
Query Start/End: Original strand, 400 - 530
Target Start/End: Complemental strand, 17104010 - 17103880
Alignment:
Q  400 caaaagttagtgagggaaatttagtgagggaaaacatgaaatccctttctaantccgtcactaaattttgcgaccaaggaatttgtgaggaattttatgt 499  Q
    ||||| |||||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||||||||||||| ||||||||||||||||||||||    
T  17104010 caaaaattagtgagggaaatttagtgagggaaaacatgaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgaggaattttatgt 17103911  T
Q  500 tttctgtcacnaattnccctccctaattttg 530  Q
    |||| ||||| |||| | ||| |||||||||    
T  17103910 tttccgtcacaaatttctctctctaattttg 17103880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 400 - 535
Target Start/End: Original strand, 33652559 - 33652694
Alignment:
Q  400 caaaagttagtgagggaaatttagtgagggaaaacatgaaatccctttctaantccgtcactaaattttgcgaccaaggaatttgtgaggaattttatgt 499  Q
    ||||| ||||||||||| |||||||||||||||||||||||||| | ||||| |||||||||||||||||||||||||||||||||||||||||| || |    
T  33652559 caaaaattagtgagggatatttagtgagggaaaacatgaaatccttctctaactccgtcactaaattttgcgaccaaggaatttgtgaggaatttcattt 33652658  T
Q  500 tttctgtcacnaattnccctccctaattttgcnttt 535  Q
    |||| ||||| |||| ||||| |||||||||| |||    
T  33652659 tttccgtcactaatttccctcgctaattttgctttt 33652694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 88; E-Value: 5e-42
Query Start/End: Original strand, 400 - 535
Target Start/End: Complemental strand, 24576169 - 24576034
Alignment:
Q  400 caaaagttagtgagggaaatttagtgagggaaaacatgaaatccctttctaantccgtcactaaattttgcgaccaaggaatttgtgaggaattttatgt 499  Q
    ||||| ||||||||||| |||||| |||||||||||||||||| || ||||| |||||||||||||||||||||||||||||||||||||||||| || |    
T  24576169 caaaaattagtgagggatatttagcgagggaaaacatgaaatctctctctaattccgtcactaaattttgcgaccaaggaatttgtgaggaatttcattt 24576070  T
Q  500 tttctgtcacnaattnccctccctaattttgcnttt 535  Q
    |||| ||||| |||| ||||| |||||||||| |||    
T  24576069 tttccgtcactaatttccctcgctaattttgctttt 24576034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 86; E-Value: 7e-41
Query Start/End: Original strand, 406 - 535
Target Start/End: Complemental strand, 8555443 - 8555314
Alignment:
Q  406 ttagtgagggaaatttagtgagggaaaacatgaaatccctttctaantccgtcactaaattttgcgaccaaggaatttgtgaggaattttatgttttctg 505  Q
    ||||||||||||||||||||||||||||||| ||||| || ||||| |||||||||||||||||||||||| ||||||||||||||||| || ||||| |    
T  8555443 ttagtgagggaaatttagtgagggaaaacataaaatctctctctaattccgtcactaaattttgcgaccaaagaatttgtgaggaatttcattttttccg 8555344  T
Q  506 tcacnaattnccctccctaattttgcnttt 535  Q
    |||| |||| ||||| |||||||||| |||    
T  8555343 tcactaatttccctcgctaattttgctttt 8555314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 400 - 535
Target Start/End: Original strand, 3823125 - 3823260
Alignment:
Q  400 caaaagttagtgagggaaatttagtgagggaaaacatgaaatccctttctaantccgtcactaaattttgcgaccaaggaatttgtgaggaattttatgt 499  Q
    ||||| ||||||||||||||||||||||||||||| | |||||||| ||||| |||||||||||||||||||||||| ||||||||||| ||||| || |    
T  3823125 caaaaattagtgagggaaatttagtgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgagaaatttcattt 3823224  T
Q  500 tttctgtcacnaattnccctccctaattttgcnttt 535  Q
    |||| ||||| |||| ||||| |||||||||| |||    
T  3823225 tttccgtcactaatttccctcgctaattttgctttt 3823260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 400 - 535
Target Start/End: Original strand, 4330970 - 4331105
Alignment:
Q  400 caaaagttagtgagggaaatttagtgagggaaaacatgaaatccctttctaantccgtcactaaattttgcgaccaaggaatttgtgaggaattttatgt 499  Q
    ||||| |||||||||||||||| |||||||||||| |||||| ||| ||||| ||||||||||||||||||||||| |||||||||||||||||| || |    
T  4330970 caaaaattagtgagggaaattttgtgagggaaaacgtgaaattcctctctaattccgtcactaaattttgcgaccatggaatttgtgaggaatttcattt 4331069  T
Q  500 tttctgtcacnaattnccctccctaattttgcnttt 535  Q
    |||| ||||| |||| ||||| |||||||||| |||    
T  4331070 tttccgtcactaatttccctcgctaattttgctttt 4331105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 400 - 535
Target Start/End: Original strand, 17810290 - 17810425
Alignment:
Q  400 caaaagttagtgagggaaatttagtgagggaaaacatgaaatccctttctaantccgtcactaaattttgcgaccaaggaatttgtgaggaattttatgt 499  Q
    ||||| ||||||||||| |||||||||||||||||||||||||||| ||||| | ||||||||||||||||||||||| |||||||||||||||| || |    
T  17810290 caaaaattagtgagggatatttagtgagggaaaacatgaaatccctctctaatttcgtcactaaattttgcgaccaagaaatttgtgaggaatttcattt 17810389  T
Q  500 tttctgtcacnaattnccctccctaattttgcnttt 535  Q
    |||| ||||| ||||  |||| |||||||||| |||    
T  17810390 tttccgtcactaattttcctcgctaattttgctttt 17810425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 400 - 535
Target Start/End: Complemental strand, 18010205 - 18010070
Alignment:
Q  400 caaaagttagtgagggaaatttagtgagggaaaacatgaaatccctttctaantccgtcactaaattttgcgaccaaggaatttgtgaggaattttatgt 499  Q
    ||||| ||||||||||| ||||| |||||||||||||||||||||| ||||| |||||||||||||||||||| ||||||||||||||||||||| || |    
T  18010205 caaaaattagtgagggatatttattgagggaaaacatgaaatccctctctaattccgtcactaaattttgcgatcaaggaatttgtgaggaatttcattt 18010106  T
Q  500 tttctgtcacnaattnccctccctaattttgcnttt 535  Q
    |||| ||||| |||| | ||| |||||||||| |||    
T  18010105 tttccgtcactaatttctctcgctaattttgctttt 18010070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 400 - 535
Target Start/End: Original strand, 19240859 - 19240994
Alignment:
Q  400 caaaagttagtgagggaaatttagtgagggaaaacatgaaatccctttctaantccgtcactaaattttgcgaccaaggaatttgtgaggaattttatgt 499  Q
    ||||| |||||||||||||||| |||||||||||| | |||| ||| ||||| |||||||||||||||||||||||||||||||||||||||||| || |    
T  19240859 caaaaattagtgagggaaattttgtgagggaaaacgtaaaattcctctctaattccgtcactaaattttgcgaccaaggaatttgtgaggaatttcattt 19240958  T
Q  500 tttctgtcacnaattnccctccctaattttgcnttt 535  Q
    |||| ||||| |||| ||||| |||||||||| |||    
T  19240959 tttccgtcactaatttccctcgctaattttgctttt 19240994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 400 - 535
Target Start/End: Original strand, 19314043 - 19314178
Alignment:
Q  400 caaaagttagtgagggaaatttagtgagggaaaacatgaaatccctttctaantccgtcactaaattttgcgaccaaggaatttgtgaggaattttatgt 499  Q
    ||||| |||||||||||||||| |||||||||||| | |||| ||| ||||| |||||||||||||||||||||||||||||||||||||||||| || |    
T  19314043 caaaaattagtgagggaaattttgtgagggaaaacgtaaaattcctctctaattccgtcactaaattttgcgaccaaggaatttgtgaggaatttcattt 19314142  T
Q  500 tttctgtcacnaattnccctccctaattttgcnttt 535  Q
    |||| ||||| |||| ||||| |||||||||| |||    
T  19314143 tttccgtcactaatttccctcgctaattttgctttt 19314178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 400 - 535
Target Start/End: Complemental strand, 27910909 - 27910774
Alignment:
Q  400 caaaagttagtgagggaaatttagtgagggaaaacatgaaatccctttctaantccgtcactaaattttgcgaccaaggaatttgtgaggaattttatgt 499  Q
    ||||| ||||||||||| ||||| |||||||||||||||||||||| ||||| ||||||||||||||||| ||| |||||||||||||||||||| || |    
T  27910909 caaaaattagtgagggatatttactgagggaaaacatgaaatccctctctaattccgtcactaaattttgtgactaaggaatttgtgaggaatttcattt 27910810  T
Q  500 tttctgtcacnaattnccctccctaattttgcnttt 535  Q
    |||| ||||| |||| ||||| |||||||||| |||    
T  27910809 tttccgtcactaatttccctcgctaattttgctttt 27910774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 400 - 535
Target Start/End: Complemental strand, 27957328 - 27957193
Alignment:
Q  400 caaaagttagtgagggaaatttagtgagggaaaacatgaaatccctttctaantccgtcactaaattttgcgaccaaggaatttgtgaggaattttatgt 499  Q
    ||||| ||||||||||| ||||| |||||||||||||||||||||| ||||| ||||||||||||||||| ||| |||||||||||||||||||| || |    
T  27957328 caaaaattagtgagggatatttactgagggaaaacatgaaatccctctctaattccgtcactaaattttgtgactaaggaatttgtgaggaatttcattt 27957229  T
Q  500 tttctgtcacnaattnccctccctaattttgcnttt 535  Q
    |||| ||||| |||| ||||| |||||||||| |||    
T  27957228 tttccgtcactaatttccctcgctaattttgctttt 27957193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 400 - 537
Target Start/End: Original strand, 37992091 - 37992228
Alignment:
Q  400 caaaagttagtgagggaaatttagtgagggaaaacatgaaatccctttctaantccgtcactaaattttgcgaccaaggaatttgtgaggaattttatgt 499  Q
    ||||| ||||||||| ||||||||||||||||||||||||||| || ||||| ||||||||||||||||||||| || |||| ||||| | |||||||||    
T  37992091 caaaaattagtgaggaaaatttagtgagggaaaacatgaaatctctctctaattccgtcactaaattttgcgactaaagaatatgtgaaggattttatgt 37992190  T
Q  500 tttctgtcacnaattnccctccctaattttgcntttcc 537  Q
    |||| ||||| ||||  ||||||||||||||| |||||    
T  37992191 tttccgtcactaattttcctccctaattttgcttttcc 37992228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 81; E-Value: 7e-38
Query Start/End: Original strand, 400 - 535
Target Start/End: Original strand, 29350915 - 29351051
Alignment:
Q  400 caaaagttagtgagggaaatttagtgagggaaaacatgaaatccctttctaantccgtcactaaattttgcgaccaaggaatttgtgaggaattttatgt 499  Q
    ||||| ||||||||||| |||||||||||||||||||||||||||| ||||| | ||||||||||||||||||||| | |||||||||||||||| || |    
T  29350915 caaaaattagtgagggatatttagtgagggaaaacatgaaatccctctctaattgcgtcactaaattttgcgaccatgaaatttgtgaggaatttcattt 29351014  T
Q  500 tttct-gtcacnaattnccctccctaattttgcnttt 535  Q
    ||||| ||||| |||| ||||| |||||||||| |||    
T  29351015 tttctagtcactaatttccctcgctaattttgctttt 29351051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 400 - 535
Target Start/End: Original strand, 22939305 - 22939440
Alignment:
Q  400 caaaagttagtgagggaaatttagtgagggaaaacatgaaatccctttctaantccgtcactaaattttgcgaccaaggaatttgtgaggaattttatgt 499  Q
    ||||| |||||||| || ||||||||||||||||||||||||| || ||||| ||||||||||||||||||||| |||||||||||||||||||| || |    
T  22939305 caaaaattagtgagagatatttagtgagggaaaacatgaaatctctctctaattccgtcactaaattttgcgacaaaggaatttgtgaggaatttcattt 22939404  T
Q  500 tttctgtcacnaattnccctccctaattttgcnttt 535  Q
    |||| ||||| |||| || || |||||||||| |||    
T  22939405 tttccgtcactaatttccttcactaattttgctttt 22939440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 400 - 535
Target Start/End: Complemental strand, 24193341 - 24193206
Alignment:
Q  400 caaaagttagtgagggaaatttagtgagggaaaacatgaaatccctttctaantccgtcactaaattttgcgaccaaggaatttgtgaggaattttatgt 499  Q
    ||||| |||||||| ||||||| |||||||||||||||||||| || ||||| ||||||||||||||||||||||| | |||||||||||||||| || |    
T  24193341 caaaaattagtgagagaaattttgtgagggaaaacatgaaatctctctctaattccgtcactaaattttgcgaccatgaaatttgtgaggaatttcattt 24193242  T
Q  500 tttctgtcacnaattnccctccctaattttgcnttt 535  Q
    |||| ||||| |||| ||||| |||||||||| |||    
T  24193241 tttccgtcactaatttccctcgctaattttgctttt 24193206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 400 - 535
Target Start/End: Original strand, 27869230 - 27869365
Alignment:
Q  400 caaaagttagtgagggaaatttagtgagggaaaacatgaaatccctttctaantccgtcactaaattttgcgaccaaggaatttgtgaggaattttatgt 499  Q
    ||||| |||||||| || ||||||||||||||||||||||||| || ||||| |||||||||||||||||||||||| ||||||||||||||||| || |    
T  27869230 caaaaattagtgagagatatttagtgagggaaaacatgaaatctctctctaattccgtcactaaattttgcgaccaaagaatttgtgaggaatttcattt 27869329  T
Q  500 tttctgtcacnaattnccctccctaattttgcnttt 535  Q
    ||||  |||| |||| ||||| |||||||||| |||    
T  27869330 tttccatcactaatttccctcgctaattttgctttt 27869365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 406 - 529
Target Start/End: Complemental strand, 43431698 - 43431575
Alignment:
Q  406 ttagtgagggaaatttagtgagggaaaacatgaaatccctttctaantccgtcactaaattttgcgaccaaggaatttgtgaggaattttatgttttctg 505  Q
    ||||||||||||||||||||||||||||| | |||||||| ||||| | |||||||||||||||| ||||||||||||||||||||||| || ||||| |    
T  43431698 ttagtgagggaaatttagtgagggaaaacgtaaaatccctctctaatttcgtcactaaattttgcaaccaaggaatttgtgaggaatttcattttttccg 43431599  T
Q  506 tcacnaattnccctccctaatttt 529  Q
    |||| |||| ||||| ||||||||    
T  43431598 tcactaatttccctcactaatttt 43431575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 400 - 537
Target Start/End: Complemental strand, 6816528 - 6816391
Alignment:
Q  400 caaaagttagtgagggaaatttagtgagggaaaacatgaaatccctttctaantccgtcactaaattttgcgaccaaggaatttgtgaggaattttatgt 499  Q
    ||||| ||||||||||| |||||||||||||||||||||||||||| ||||| |||| ||||||||||||| ||||||||||||||||| |||||||| |    
T  6816528 caaaaattagtgagggatatttagtgagggaaaacatgaaatccctctctaattccgccactaaattttgcaaccaaggaatttgtgagaaattttattt 6816429  T
Q  500 tttctgtcacnaattnccctccctaattttgcntttcc 537  Q
    |||   |||| |||| ||||| |||||| ||| |||||    
T  6816428 ttttcatcactaatttccctcgctaattatgcttttcc 6816391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 401 - 537
Target Start/End: Complemental strand, 18844688 - 18844552
Alignment:
Q  401 aaaagttagtgagggaaatttagtgagggaaaacatgaaatccctttctaantccgtcactaaattttgcgaccaaggaatttgtgaggaattttatgtt 500  Q
    |||| ||||||||||||||||||||| |||||||||||||||||| ||||| |  || | ||||||||||||||||  ||||||||||||||||||||||    
T  18844688 aaaaattagtgagggaaatttagtgaaggaaaacatgaaatccctctctaattttgttattaaattttgcgaccaaaaaatttgtgaggaattttatgtt 18844589  T
Q  501 ttctgtcacnaattnccctccctaattttgcntttcc 537  Q
    |||  |||| |||| || ||||||||||||| |||||    
T  18844588 ttccatcacaaattaccatccctaattttgcttttcc 18844552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 76; E-Value: 7e-35
Query Start/End: Original strand, 416 - 535
Target Start/End: Original strand, 11938753 - 11938871
Alignment:
Q  416 aaatttagtgagggaaaacatgaaatccctttctaantccgtcactaaattttgcgaccaaggaatttgtgaggaattttatgttttctgtcacnaattn 515  Q
    ||||||||||||||||||| | |||||||| ||||| |||||||||||||||||||||||||||||||||||||||||| || ||||| ||||| ||||     
T  11938753 aaatttagtgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaaggaatttgtgaggaatttcat-ttttccgtcactaattt 11938851  T
Q  516 ccctccctaattttgcnttt 535  Q
    ||||| |||||||||| |||    
T  11938852 ccctcgctaattttgctttt 11938871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 76; E-Value: 7e-35
Query Start/End: Original strand, 416 - 535
Target Start/End: Original strand, 19256220 - 19256339
Alignment:
Q  416 aaatttagtgagggaaaacatgaaatccctttctaantccgtcactaaattttgcgaccaaggaatttgtgaggaattttatgttttctgtcacnaattn 515  Q
    ||||||||||||||||||| | |||||||| ||||| ||||||||||||||||||||||||| ||||||||||||||||||| ||||| ||||| ||||     
T  19256220 aaatttagtgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaagaaatttgtgaggaattttattttttccgtcactaattt 19256319  T
Q  516 ccctccctaattttgcnttt 535  Q
    |||||  ||||||||| |||    
T  19256320 ccctcgttaattttgctttt 19256339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 76; E-Value: 7e-35
Query Start/End: Original strand, 420 - 535
Target Start/End: Complemental strand, 19488186 - 19488071
Alignment:
Q  420 ttagtgagggaaaacatgaaatccctttctaantccgtcactaaattttgcgaccaaggaatttgtgaggaattttatgttttctgtcacnaattnccct 519  Q
    |||||||||||||| ||||||| ||| ||||| |||||||||||||||||||||||||||||||||||||||||| || ||||| ||||| |||| ||||    
T  19488186 ttagtgagggaaaatatgaaattcctctctaattccgtcactaaattttgcgaccaaggaatttgtgaggaatttcattttttccgtcactaatttccct 19488087  T
Q  520 ccctaattttgcnttt 535  Q
    | |||||||||| |||    
T  19488086 cgctaattttgctttt 19488071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 76; E-Value: 7e-35
Query Start/End: Original strand, 400 - 535
Target Start/End: Original strand, 21350470 - 21350605
Alignment:
Q  400 caaaagttagtgagggaaatttagtgagggaaaacatgaaatccctttctaantccgtcactaaattttgcgaccaaggaatttgtgaggaattttatgt 499  Q
    ||||| ||||||||||||||||||||||| ||||| | |||||| | ||||| |||||||||||||||||||||||||||||||||||||||||| || |    
T  21350470 caaaaattagtgagggaaatttagtgaggaaaaacgtaaaatccatctctaattccgtcactaaattttgcgaccaaggaatttgtgaggaatttcattt 21350569  T
Q  500 tttctgtcacnaattnccctccctaattttgcnttt 535  Q
    |||| ||||| |||| ||||  || ||||||| |||    
T  21350570 tttccgtcactaatttcccttgcttattttgctttt 21350605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 76; E-Value: 7e-35
Query Start/End: Original strand, 400 - 535
Target Start/End: Original strand, 32961651 - 32961786
Alignment:
Q  400 caaaagttagtgagggaaatttagtgagggaaaacatgaaatccctttctaantccgtcactaaattttgcgaccaaggaatttgtgaggaattttatgt 499  Q
    ||||| ||||||||||||||||||||||||||||  | |||| ||| ||||| |||||||||||| |||||||||||| |||||||||||||||| || |    
T  32961651 caaaaattagtgagggaaatttagtgagggaaaatgtaaaattcctctctaattccgtcactaaactttgcgaccaagaaatttgtgaggaatttcattt 32961750  T
Q  500 tttctgtcacnaattnccctccctaattttgcnttt 535  Q
    ||||||||||  ||| ||||| |||||||||| |||    
T  32961751 tttctgtcactgatttccctcgctaattttgctttt 32961786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 441 - 537
Target Start/End: Original strand, 8789873 - 8789969
Alignment:
Q  441 tccctttctaantccgtcactaaattttgcgaccaaggaatttgtgaggaattttatgttttctgtcacnaattnccctccctaattttgcntttcc 537  Q
    ||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||  ||||||||||||||| |||||    
T  8789873 tccctctctaattccgtcactaaattttgcgaccaaggaatttgtgaggaattttatgttttcagtcacaaattttcctccctaattttgcttttcc 8789969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 420 - 535
Target Start/End: Original strand, 10917839 - 10917954
Alignment:
Q  420 ttagtgagggaaaacatgaaatccctttctaantccgtcactaaattttgcgaccaaggaatttgtgaggaattttatgttttctgtcacnaattnccct 519  Q
    ||||||||| |||||||| ||||||| ||||| |||||||||||||||||| | |||| ||||| ||||||||||||||||||| ||||| |||| ||||    
T  10917839 ttagtgaggaaaaacatgcaatccctctctaattccgtcactaaattttgcaatcaagaaatttatgaggaattttatgttttccgtcacaaatttccct 10917938  T
Q  520 ccctaattttgcnttt 535  Q
    |||||||||||| |||    
T  10917939 ccctaattttgctttt 10917954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 420 - 535
Target Start/End: Complemental strand, 13061056 - 13060941
Alignment:
Q  420 ttagtgagggaaaacatgaaatccctttctaantccgtcactaaattttgcgaccaaggaatttgtgaggaattttatgttttctgtcacnaattnccct 519  Q
    |||||||||||||||||||||||||| ||||| || |||||||||||||||||| |||||||||||||||||||| || ||||| ||||| ||||  |||    
T  13061056 ttagtgagggaaaacatgaaatccctctctaattctgtcactaaattttgcgactaaggaatttgtgaggaatttcattttttccgtcactaatttacct 13060957  T
Q  520 ccctaattttgcnttt 535  Q
    | |||||||||| |||    
T  13060956 cgctaattttgctttt 13060941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 400 - 530
Target Start/End: Complemental strand, 4647900 - 4647770
Alignment:
Q  400 caaaagttagtgagggaaatttagtgagggaaaacatgaaatccctttctaantccgtcactaaattttgcgaccaaggaatttgtgaggaattttatgt 499  Q
    ||||| |||||||| ||||||| |||||||||||  |||||||||| ||||| ||||||||||||||||||||| | | |||||||||||||||| || |    
T  4647900 caaaaattagtgagagaaattttgtgagggaaaatgtgaaatccctctctaattccgtcactaaattttgcgactatgaaatttgtgaggaatttcattt 4647801  T
Q  500 tttctgtcacnaattnccctccctaattttg 530  Q
    |||| ||||| |||| ||||| |||||||||    
T  4647800 tttccgtcactaatttccctcgctaattttg 4647770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 400 - 529
Target Start/End: Complemental strand, 40289565 - 40289437
Alignment:
Q  400 caaaagttagtgagggaaatttagtgagggaaaacatgaaatccctttctaantccgtcactaaattttgcgaccaaggaatttgtgaggaattttatgt 499  Q
    ||||| ||||||||||||||||||||||||||||| | ||||||||  |||| |||||||||||||||||||||||||||||||||||| || || || |    
T  40289565 caaaaattagtgagggaaatttagtgagggaaaacgtaaaatccctc-ctaattccgtcactaaattttgcgaccaaggaatttgtgagaaaattcattt 40289467  T
Q  500 tttctgtcacnaattnccctccctaatttt 529  Q
    |||| ||||| ||||  |||| ||||||||    
T  40289466 tttccgtcactaattttcctcgctaatttt 40289437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 416 - 520
Target Start/End: Complemental strand, 5670298 - 5670194
Alignment:
Q  416 aaatttagtgagggaaaacatgaaatccctttctaantccgtcactaaattttgcgaccaaggaatttgtgaggaattttatgttttctgtcacnaattn 515  Q
    ||||||||||||||||||| | |||||||| ||||| |||||||||||||||||||||||||||||||||||||||||  || ||||| ||||| ||||     
T  5670298 aaatttagtgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaaggaatttgtgaggaattccattttttccgtcactaattt 5670199  T
Q  516 ccctc 520  Q
    |||||    
T  5670198 ccctc 5670194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 400 - 535
Target Start/End: Complemental strand, 9915185 - 9915051
Alignment:
Q  400 caaaagttagtgagggaaatttagtgagggaaaacatgaaatccctttctaantccgtcactaaattttgcgaccaaggaatttgtgaggaattttatgt 499  Q
    ||||| |||||||||||||||| |||||||||||| |||||||||| |||||  | ||||||||||||||||| || |||||||||||||||||| || |    
T  9915185 caaaaattagtgagggaaattttgtgagggaaaacgtgaaatccctctctaatcctgtcactaaattttgcga-catggaatttgtgaggaatttcattt 9915087  T
Q  500 tttctgtcacnaattnccctccctaattttgcnttt 535  Q
    |||| ||||| |||| | ||| |||||||||| |||    
T  9915086 tttccgtcactaatttctctcgctaattttgctttt 9915051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 420 - 524
Target Start/End: Complemental strand, 26399132 - 26399028
Alignment:
Q  420 ttagtgagggaaaacatgaaatccctttctaantccgtcactaaattttgcgaccaaggaatttgtgaggaattttatgttttctgtcacnaattnccct 519  Q
    ||||||||||||||| |||||||||| ||||| |||||||||||||||||||||||| |||||||||||  ||||||| ||||| ||||| |||| ||||    
T  26399132 ttagtgagggaaaacgtgaaatccctctctaattccgtcactaaattttgcgaccaacgaatttgtgagagattttattttttccgtcactaatttccct 26399033  T
Q  520 cccta 524  Q
    |||||    
T  26399032 cccta 26399028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 416 - 535
Target Start/End: Original strand, 30687944 - 30688063
Alignment:
Q  416 aaatttagtgagggaaaacatgaaatccctttctaantccgtcactaaattttgcgaccaaggaatttgtgaggaattttatgttttctgtcacnaattn 515  Q
    ||||||||||| ||||||  | |||||||| ||||| |||||||||||||||||||||||||||||||||||||||||| || ||||| |||||  |||     
T  30687944 aaatttagtgaaggaaaatgtaaaatccctctctaattccgtcactaaattttgcgaccaaggaatttgtgaggaatttcattttttcggtcactgattt 30688043  T
Q  516 ccctccctaattttgcnttt 535  Q
    ||||| |||||||||| |||    
T  30688044 ccctcgctaattttgctttt 30688063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 420 - 535
Target Start/End: Original strand, 32247921 - 32248036
Alignment:
Q  420 ttagtgagggaaaacatgaaatccctttctaantccgtcactaaattttgcgaccaaggaatttgtgaggaattttatgttttctgtcacnaattnccct 519  Q
    ||||||||||||||| |||||||||| ||||| |||||||||||||||||||||||  ||||||||||||||||| || ||||| ||||| |||| ||||    
T  32247921 ttagtgagggaaaacgtgaaatccctctctaattccgtcactaaattttgcgaccatagaatttgtgaggaatttcattttttccgtcactaatttccct 32248020  T
Q  520 ccctaattttgcnttt 535  Q
    |  ||||||||| |||    
T  32248021 cgttaattttgctttt 32248036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 416 - 531
Target Start/End: Original strand, 24636660 - 24636775
Alignment:
Q  416 aaatttagtgagggaaaacatgaaatccctttctaantccgtcactaaattttgcgaccaaggaatttgtgaggaattttatgttttctgtcacnaattn 515  Q
    ||||||||||||||||||| | |||||||| ||||| |||||||||||||||||||| |||| |||||||||||||||| || ||||| ||||| ||||     
T  24636660 aaatttagtgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgatcaagaaatttgtgaggaatttcattttttccgtcactaattt 24636759  T
Q  516 ccctccctaattttgc 531  Q
    |||||  |||||||||    
T  24636760 ccctcgttaattttgc 24636775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 400 - 503
Target Start/End: Original strand, 5879196 - 5879299
Alignment:
Q  400 caaaagttagtgagggaaatttagtgagggaaaacatgaaatccctttctaantccgtcactaaattttgcgaccaaggaatttgtgaggaattttatgt 499  Q
    ||||| ||||||||||||||||||||||| ||||| | |||| ||| ||||| |||||||||||||||| |||||||| ||||||||||||||||||| |    
T  5879196 caaaaattagtgagggaaatttagtgaggaaaaacgtaaaatgcctctctaattccgtcactaaattttacgaccaagaaatttgtgaggaattttattt 5879295  T
Q  500 tttc 503  Q
    ||||    
T  5879296 tttc 5879299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 423 - 535
Target Start/End: Complemental strand, 25655980 - 25655868
Alignment:
Q  423 gtgagggaaaacatgaaatccctttctaantccgtcactaaattttgcgaccaaggaatttgtgaggaattttatgttttctgtcacnaattnccctccc 522  Q
    |||||||||||| |||||||||| ||||| ||  ||||||||||||||||||| |||||||||||||||||| || ||||| ||||| |||| ||||| |    
T  25655980 gtgagggaaaacgtgaaatccctctctaattctatcactaaattttgcgaccatggaatttgtgaggaatttcattttttccgtcactaatttccctcac 25655881  T
Q  523 taattttgcnttt 535  Q
    ||||||||| |||    
T  25655880 taattttgctttt 25655868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 400 - 535
Target Start/End: Original strand, 6817046 - 6817181
Alignment:
Q  400 caaaagttagtgagggaaatttagtgagggaaaacatgaaatccctttctaantccgtcactaaattttgcgaccaaggaatttgtgaggaattttatgt 499  Q
    ||||| ||||||||||||||||||||||||||||  | ||||| || ||||| ||||||||||||||||| ||||||| |||||||||||||||| || |    
T  6817046 caaaaattagtgagggaaatttagtgagggaaaatgtaaaatctctctctaattccgtcactaaattttgtgaccaagaaatttgtgaggaatttcattt 6817145  T
Q  500 tttctgtcacnaattnccctccctaattttgcnttt 535  Q
    |||| |||||  |||  |||  |||||||||| |||    
T  6817146 tttccgtcactgattttccttgctaattttgctttt 6817181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 401 - 529
Target Start/End: Complemental strand, 16062083 - 16061955
Alignment:
Q  401 aaaagttagtgagggaaatttagtgagggaaaacatgaaatccctttctaantccgtcactaaattttgcgaccaaggaatttgtgaggaattttatgtt 500  Q
    |||| ||||||||||||||||  ||||| ||||| ||||||| || ||||| |||||||||| ||||||||||||  ||||||||||||||||| || ||    
T  16062083 aaaaattagtgagggaaattttttgaggaaaaacgtgaaatcactctctaattccgtcactacattttgcgaccatagaatttgtgaggaatttcatttt 16061984  T
Q  501 ttctgtcacnaattnccctccctaatttt 529  Q
    ||| ||||| |||| ||||| ||||||||    
T  16061983 ttccgtcactaatttccctcgctaatttt 16061955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 409 - 529
Target Start/End: Original strand, 29345072 - 29345192
Alignment:
Q  409 gtgagggaaatttagtgagggaaaacatgaaatccctttctaantccgtcactaaattttgcgaccaaggaatttgtgaggaattttatgttttctgtca 508  Q
    ||||||||||||||| |||||||||| ||||||||||  |||| |||||||||||||||||| || ||| |||||||||   ||||||| ||||| ||||    
T  29345072 gtgagggaaatttagagagggaaaacgtgaaatccctccctaattccgtcactaaattttgccactaagaaatttgtgaaagattttattttttccgtca 29345171  T
Q  509 cnaattnccctccctaatttt 529  Q
    | |||| ||||||||||||||    
T  29345172 ctaatttccctccctaatttt 29345192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 416 - 535
Target Start/End: Complemental strand, 30467083 - 30466964
Alignment:
Q  416 aaatttagtgagggaaaacatgaaatccctttctaantccgtcactaaattttgcgaccaaggaatttgtgaggaattttatgttttctgtcacnaattn 515  Q
    ||||||||||||||||||| | ||||| || ||||| ||| ||||||||||||||||||||| ||||| ||||||||||||  ||||| ||||| ||||     
T  30467083 aaatttagtgagggaaaacgtaaaatctctctctaattccatcactaaattttgcgaccaagaaatttatgaggaattttaatttttccgtcactaattt 30466984  T
Q  516 ccctccctaattttgcnttt 535  Q
    ||||| |||||||||| |||    
T  30466983 ccctcgctaattttgctttt 30466964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 416 - 529
Target Start/End: Complemental strand, 25000560 - 25000447
Alignment:
Q  416 aaatttagtgagggaaaacatgaaatccctttctaantccgtcactaaattttgcgaccaaggaatttgtgaggaattttatgttttctgtcacnaattn 515  Q
    ||||||||||||||||||| | | |||||| ||||| |||||||| ||||| |||||| |||||||||||||||||||| || ||||| ||||| ||||     
T  25000560 aaatttagtgagggaaaacgtaacatccctctctaattccgtcacaaaattctgcgactaaggaatttgtgaggaatttcattttttccgtcactaattt 25000461  T
Q  516 ccctccctaatttt 529  Q
    ||||| ||||||||    
T  25000460 ccctcactaatttt 25000447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 420 - 535
Target Start/End: Complemental strand, 23752411 - 23752296
Alignment:
Q  420 ttagtgagggaaaacatgaaatccctttctaantccgtcactaaattttgcgaccaaggaatttgtgaggaattttatgttttctgtcacnaattnccct 519  Q
    ||||||||||||||  | ||||| || ||||| |||||||||||||||||||||||||||||||||||| ||||| || ||||| ||||| |||  ||||    
T  23752411 ttagtgagggaaaatgtaaaatcactctctaattccgtcactaaattttgcgaccaaggaatttgtgagaaatttcattttttccgtcactaatatccct 23752312  T
Q  520 ccctaattttgcnttt 535  Q
    | |||||||||| |||    
T  23752311 cgctaattttgctttt 23752296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 420 - 530
Target Start/End: Complemental strand, 31399633 - 31399523
Alignment:
Q  420 ttagtgagggaaaacatgaaatccctttctaantccgtcactaaattttgcgaccaaggaatttgtgaggaattttatgttttctgtcacnaattnccct 519  Q
    ||||||||||||||| |||||||| | ||||| ||||||||||||||||||||||| |||||||||||||||||| || ||||   |||| |||| ||||    
T  31399633 ttagtgagggaaaacgtgaaatccatctctaattccgtcactaaattttgcgaccatggaatttgtgaggaatttcatttttttcatcactaatttccct 31399534  T
Q  520 ccctaattttg 530  Q
    |  ||||||||    
T  31399533 cgttaattttg 31399523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 420 - 535
Target Start/End: Original strand, 8824837 - 8824952
Alignment:
Q  420 ttagtgagggaaaacatgaaatccctttctaantccgtcactaaattttgcgaccaaggaatttgtgaggaattttatgttttctgtcacnaattnccct 519  Q
    ||||||||| ||||  | |||||||| ||||| ||||||||||||||||||||| ||||||| |||||||||||| || |||||  |||| |||| ||||    
T  8824837 ttagtgaggaaaaatgtaaaatccctctctaattccgtcactaaattttgcgactaaggaatctgtgaggaatttgattttttccatcactaatttccct 8824936  T
Q  520 ccctaattttgcnttt 535  Q
    | |||||||||| |||    
T  8824937 cgctaattttgctttt 8824952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 420 - 509
Target Start/End: Complemental strand, 19493781 - 19493691
Alignment:
Q  420 ttagtgagggaaaacatgaaa-tccctttctaantccgtcactaaattttgcgaccaaggaatttgtgaggaattttatgttttctgtcac 509  Q
    ||||||||||||||||| ||| ||||| ||||| |||||||||||||||||||||||| ||||||||||||||||| || ||||| |||||    
T  19493781 ttagtgagggaaaacataaaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgaggaatttcattttttccgtcac 19493691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 420 - 535
Target Start/End: Complemental strand, 25273452 - 25273338
Alignment:
Q  420 ttagtgagggaaaacatgaaatccctttctaantccgtcactaaattttgcgaccaaggaatttgtgaggaattttatgttttctgtcacnaattnccct 519  Q
    ||||||||||||||| | |||||||| ||||| || ||||||||||||||||||||| ||||||||||||| ||| || ||||| ||||| |||| ||||    
T  25273452 ttagtgagggaaaacgtaaaatccctctctaattctgtcactaaattttgcgaccaaagaatttgtgaggactttcattttttc-gtcactaatttccct 25273354  T
Q  520 ccctaattttgcnttt 535  Q
    |  ||||||||| |||    
T  25273353 cgttaattttgctttt 25273338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 400 - 535
Target Start/End: Original strand, 15251595 - 15251728
Alignment:
Q  400 caaaagttagtgagggaaatttagtgagggaaaacatgaaatccctttctaantccgtcactaaattttgcgaccaaggaatttgtgaggaattttatgt 499  Q
    ||||| ||||||||| |||||||  |||||||||| |||||||| | ||||| || |||||||||||||||||||||  || | |||||  ||||||| |    
T  15251595 caaaaattagtgagg-aaatttaaagagggaaaacgtgaaatccttctctaattctgtcactaaattttgcgaccaa-aaaatcgtgagagattttattt 15251692  T
Q  500 tttctgtcacnaattnccctccctaattttgcnttt 535  Q
    |||| ||||| |||| |||||||||||||||| |||    
T  15251693 tttccgtcactaatttccctccctaattttgctttt 15251728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 400 - 535
Target Start/End: Original strand, 9631395 - 9631531
Alignment:
Q  400 caaaagttagtgagggaaatttagtgagggaaaacatgaaatccctttctaantcc-gtcactaaattttgcgaccaaggaatttgtgaggaattttatg 498  Q
    ||||| |||| ||||||||||| |||| ||||||| ||||||  || ||||| ||| |||||||||||||||||  |  ||||||||||||||||||||     
T  9631395 caaaaattagcgagggaaattttgtgaaggaaaacgtgaaatttctctctaattcccgtcactaaattttgcgagtatagaatttgtgaggaattttatt 9631494  T
Q  499 ttttctgtcacnaattnccctccctaattttgcnttt 535  Q
    ||||| ||||| ||||  |||  |||||||||| |||    
T  9631495 ttttccgtcactaattttccttgctaattttgctttt 9631531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 406 - 529
Target Start/End: Complemental strand, 31344311 - 31344188
Alignment:
Q  406 ttagtgagggaaatttagtgagggaaaacatgaaatccctttctaantccgtcactaaattttgcgaccaaggaatttgtgaggaattttatgttttctg 505  Q
    |||||||||||| ||||| |||||||||  |||||| ||| ||||| ||||||| |||||||||||| |||| ||||| |||| ||||| || |||||      
T  31344311 ttagtgagggaattttagagagggaaaatgtgaaattcctctctaattccgtcattaaattttgcgatcaagaaatttatgagaaatttgattttttcca 31344212  T
Q  506 tcacnaattnccctccctaatttt 529  Q
    |||| |||| || || ||||||||    
T  31344211 tcactaatttccttctctaatttt 31344188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 420 - 529
Target Start/End: Complemental strand, 33413095 - 33412992
Alignment:
Q  420 ttagtgagggaaaacatgaaatccctttctaantccgtcactaaattttgcgaccaaggaatttgtgaggaattttatgttttctgtcacnaattnccct 519  Q
    ||||||||||||||| | |||||||| ||||| ||||||||||||||||||      |||||||||||||||||| || ||||| || || |||| ||||    
T  33413095 ttagtgagggaaaacgtaaaatccctctctaattccgtcactaaattttgc------ggaatttgtgaggaatttcattttttccgttactaatttccct 33413002  T
Q  520 ccctaatttt 529  Q
    | ||||||||    
T  33413001 cgctaatttt 33412992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 465 - 535
Target Start/End: Original strand, 25274654 - 25274724
Alignment:
Q  465 ttttgcgaccaaggaatttgtgaggaattttatgttttctgtcacnaattnccctccctaattttgcnttt 535  Q
    |||||||||||||||||||||||| ||||| || ||||| ||||| |||| ||||| |||||||||| |||    
T  25274654 ttttgcgaccaaggaatttgtgagaaatttcattttttccgtcactaatttccctcgctaattttgctttt 25274724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 400 - 514
Target Start/End: Complemental strand, 21219383 - 21219271
Alignment:
Q  400 caaaagttagtgagggaaatttagtgagggaaaacatgaaatccctttctaantccgtcactaaattttgcgaccaaggaatttgtgaggaattttatgt 499  Q
    ||||| |||||||||||||||||  |||| || || |||||||||| ||||| ||| ||||||||||||||||||||  ||||| |||| ||||| || |    
T  21219383 caaaaattagtgagggaaatttac-gagg-aatacgtgaaatccctctctaattccatcactaaattttgcgaccaaaaaatttatgagtaatttcattt 21219286  T
Q  500 tttctgtcacnaatt 514  Q
    |||| ||||| ||||    
T  21219285 tttccgtcactaatt 21219271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #56
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 420 - 514
Target Start/End: Complemental strand, 41527825 - 41527731
Alignment:
Q  420 ttagtgagggaaaacatgaaatccctttctaantccgtcactaaattttgcgaccaaggaatttgtgaggaattttatgttttctgtcacnaatt 514  Q
    ||||||||||| ||||||||||| ||  |||| |  || |||||||||||||| |||||||||| ||||| ||||||| ||||| ||||| ||||    
T  41527825 ttagtgagggataacatgaaatctctccctaattatgttactaaattttgcgatcaaggaatttatgagggattttattttttccgtcactaatt 41527731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #57
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 400 - 502
Target Start/End: Complemental strand, 3692316 - 3692214
Alignment:
Q  400 caaaagttagtgagggaaatttagtgagggaaaacatgaaatccctttctaantccgtcactaaattttgcgaccaaggaatttgtgaggaattttatgt 499  Q
    ||||| |||||||||||||||||  |||| ||||| | |||||| | ||||| ||| | ||||||||||  ||| || |||||||||||||||||||| |    
T  3692316 caaaaattagtgagggaaatttatagaggtaaaacgtaaaatccttctctaattccattactaaattttatgactaaagaatttgtgaggaattttattt 3692217  T
Q  500 ttt 502  Q
    |||    
T  3692216 ttt 3692214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #58
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 438 - 535
Target Start/End: Complemental strand, 6084351 - 6084256
Alignment:
Q  438 aaatccctttctaantccgtcactaaattttgcgaccaaggaatttgtgaggaattttatgttttctgtcacnaattnccctccctaattttgcnttt 535  Q
    ||||| || ||||| ||||||||||||||||  |||||||||||||| |||  ||||||| ||||| ||||| ||||   |||||||||||||| |||    
T  6084351 aaatctctctctaattccgtcactaaatttttagaccaaggaatttgggag--attttattttttccgtcactaatttatctccctaattttgctttt 6084256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #59
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 459 - 529
Target Start/End: Complemental strand, 42700743 - 42700673
Alignment:
Q  459 actaaattttgcgaccaaggaatttgtgaggaattttatgttttctgtcacnaattnccctccctaatttt 529  Q
    ||||||||||||||| |||||||||||||||||||| || ||||| |||||  |||  |||| ||||||||    
T  42700743 actaaattttgcgactaaggaatttgtgaggaatttcattttttccgtcactgattttcctcgctaatttt 42700673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #60
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 424 - 497
Target Start/End: Original strand, 15289660 - 15289731
Alignment:
Q  424 tgagggaaaacatgaaatccctttctaantccgtcactaaattttgcgaccaaggaatttgtgaggaattttat 497  Q
    ||||||||||||||||||  ||  |||| ||| |||||||||||| ||||||| |||||||||||  |||||||    
T  15289660 tgagggaaaacatgaaatatct--ctaattccatcactaaattttacgaccaaagaatttgtgagagattttat 15289731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #61
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 424 - 497
Target Start/End: Original strand, 15470029 - 15470100
Alignment:
Q  424 tgagggaaaacatgaaatccctttctaantccgtcactaaattttgcgaccaaggaatttgtgaggaattttat 497  Q
    ||||||||||||||||||  ||  |||| ||| |||||||||||| ||||||| |||||||||||  |||||||    
T  15470029 tgagggaaaacatgaaatatct--ctaattccatcactaaattttacgaccaaagaatttgtgagagattttat 15470100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #62
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 416 - 535
Target Start/End: Original strand, 17003270 - 17003389
Alignment:
Q  416 aaatttagtgagggaaaacatgaaatccctttctaantccgtcactaaattttgcgaccaaggaatttgtgaggaattttatgttttctgtcacnaattn 515  Q
    |||||||| |||||||||| | ||||  || |||||  | |||| ||||||||| || |||||||||| |||||  |||||| |||||   ||| ||||     
T  17003270 aaatttagagagggaaaacgtaaaattgctctctaatacagtcattaaattttgtgatcaaggaatttatgaggggttttattttttcccacactaattt 17003369  T
Q  516 ccctccctaattttgcnttt 535  Q
     ||||||||||||||| |||    
T  17003370 tcctccctaattttgctttt 17003389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #63
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 456 - 537
Target Start/End: Complemental strand, 2265467 - 2265387
Alignment:
Q  456 gtcactaaattttgcgaccaaggaatttgtgaggaattttatgttttctgtcacnaattnccctccctaattttgcntttcc 537  Q
    |||||||||||||| || ||| |||||||||| | ||||||| ||||| ||||| ||||  | ||||||||||| | |||||    
T  2265467 gtcactaaattttgtgatcaaagaatttgtgaaggattttattttttccgtcactaattt-cgtccctaattttacttttcc 2265387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0058 (Bit Score: 102; Significance: 2e-50; HSPs: 1)
Name: scaffold0058
Description:

Target: scaffold0058; HSP #1
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 400 - 537
Target Start/End: Complemental strand, 74686 - 74549
Alignment:
Q  400 caaaagttagtgagggaaatttagtgagggaaaacatgaaatccctttctaantccgtcactaaattttgcgaccaaggaatttgtgaggaattttatgt 499  Q
    ||||| |||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||||||||||| ||||| |||||||||||||||    
T  74686 caaaaattagtgagggaaatttagtgagggaaaacatgaaatccctctctaattccgtcactaaattttgcgaccaagaaatttatgaggaattttatgt 74587  T
Q  500 tttctgtcacnaattnccctccctaattttgcntttcc 537  Q
    |||| ||||| |||| |||||||||||||| | |||||    
T  74586 tttccgtcacaaatttccctccctaattttacttttcc 74549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 102; Significance: 2e-50; HSPs: 61)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 400 - 537
Target Start/End: Original strand, 5399601 - 5399738
Alignment:
Q  400 caaaagttagtgagggaaatttagtgagggaaaacatgaaatccctttctaantccgtcactaaattttgcgaccaaggaatttgtgaggaattttatgt 499  Q
    ||||| |||||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||||||| ||||||||||||||||||||||||||||    
T  5399601 caaaaattagtgagggaaatttagtgagggaaaacatgaaatccctctctaattccgtcactaaattttgcaaccaaggaatttgtgaggaattttatgt 5399700  T
Q  500 tttctgtcacnaattnccctccctaattttgcntttcc 537  Q
    |||| ||||| ||||  ||||||||| ||||| |||||    
T  5399701 tttccgtcacaaattttcctccctaagtttgcttttcc 5399738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 101; E-Value: 8e-50
Query Start/End: Original strand, 400 - 536
Target Start/End: Original strand, 25147713 - 25147849
Alignment:
Q  400 caaaagttagtgagggaaatttagtgagggaaaacatgaaatccctttctaantccgtcactaaattttgcgaccaaggaatttgtgaggaattttatgt 499  Q
    ||||| |||||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||||||||||||| ||||||||||||||||||||||    
T  25147713 caaaaattagtgagggaaatttagtgagggaaaacatgaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgaggaattttatgt 25147812  T
Q  500 tttctgtcacnaattnccctccctaattttgcntttc 536  Q
    |||| ||||  |||| ||||| |||||||||| ||||    
T  25147813 tttccgtcataaatttccctctctaattttgcttttc 25147849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 98; E-Value: 5e-48
Query Start/End: Original strand, 400 - 537
Target Start/End: Original strand, 33914051 - 33914188
Alignment:
Q  400 caaaagttagtgagggaaatttagtgagggaaaacatgaaatccctttctaantccgtcactaaattttgcgaccaaggaatttgtgaggaattttatgt 499  Q
    ||||| ||||||||||||||||||||||| |||||||||||||||| ||||| ||||||||||||||||||||||||  ||||| |||||||||||||||    
T  33914051 caaaaattagtgagggaaatttagtgaggaaaaacatgaaatccctctctaattccgtcactaaattttgcgaccaaaaaatttatgaggaattttatgt 33914150  T
Q  500 tttctgtcacnaattnccctccctaattttgcntttcc 537  Q
    |||| ||||| |||| |||||||||||||||| |||||    
T  33914151 tttccgtcacaaatttccctccctaattttgcttttcc 33914188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 400 - 529
Target Start/End: Complemental strand, 2275823 - 2275694
Alignment:
Q  400 caaaagttagtgagggaaatttagtgagggaaaacatgaaatccctttctaantccgtcactaaattttgcgaccaaggaatttgtgaggaattttatgt 499  Q
    ||||| ||||||||||| |||||||||||||||||||||||||||| ||||| |||||||||||||||||||| ||||||||||||||||||||| || |    
T  2275823 caaaaattagtgagggatatttagtgagggaaaacatgaaatccctctctaattccgtcactaaattttgcgatcaaggaatttgtgaggaatttcattt 2275724  T
Q  500 tttctgtcacnaattnccctccctaatttt 529  Q
    |||| ||||| |||| ||||| ||||||||    
T  2275723 tttccgtcactaatttccctcgctaatttt 2275694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 423 - 537
Target Start/End: Complemental strand, 9059074 - 9058960
Alignment:
Q  423 gtgagggaaaacatgaaatccctttctaantccgtcactaaattttgcgaccaaggaatttgtgaggaattttatgttttctgtcacnaattnccctccc 522  Q
    ||||||||||||||||||||||| ||||| ||||||| |||||||||||||||||||||||||||| |||||||||||||| ||||| |||| |||||||    
T  9059074 gtgagggaaaacatgaaatccctctctaattccgtcattaaattttgcgaccaaggaatttgtgagaaattttatgttttcagtcacaaatttccctccc 9058975  T
Q  523 taattttgcntttcc 537  Q
    ||||||||| |||||    
T  9058974 taattttgcttttcc 9058960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 86; E-Value: 7e-41
Query Start/End: Original strand, 400 - 530
Target Start/End: Complemental strand, 22128457 - 22128327
Alignment:
Q  400 caaaagttagtgagggaaatttagtgagggaaaacatgaaatccctttctaantccgtcactaaattttgcgaccaaggaatttgtgaggaattttatgt 499  Q
    ||||| ||||||||||||||||||||||||||||| |||||||||| ||||| || |||||||||||||||||||||||||||||||||  ||||||| |    
T  22128457 caaaaattagtgagggaaatttagtgagggaaaacgtgaaatccctctctaattctgtcactaaattttgcgaccaaggaatttgtgagagattttattt 22128358  T
Q  500 tttctgtcacnaattnccctccctaattttg 530  Q
    |||| ||||| |||| |||||||| ||||||    
T  22128357 tttccgtcactaatttccctccctgattttg 22128327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 86; E-Value: 7e-41
Query Start/End: Original strand, 406 - 535
Target Start/End: Complemental strand, 32175876 - 32175747
Alignment:
Q  406 ttagtgagggaaatttagtgagggaaaacatgaaatccctttctaantccgtcactaaattttgcgaccaaggaatttgtgaggaattttatgttttctg 505  Q
    ||||||||||||||||||||||||||||| | |||||||| ||||| ||||||||||||||||||||||||| ||||||||||||||||||| ||||| |    
T  32175876 ttagtgagggaaatttagtgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaagaaatttgtgaggaattttattttttccg 32175777  T
Q  506 tcacnaattnccctccctaattttgcnttt 535  Q
    |||| |||| |||||  ||||||||| |||    
T  32175776 tcactaatttccctcgttaattttgctttt 32175747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 400 - 535
Target Start/End: Complemental strand, 55309358 - 55309222
Alignment:
Q  400 caaaagttagtgagggaaatttagtgagggaaaacatgaaatccctttctaantccgtcactaaattttgcgaccaaggaatttgtgaggaatttta-tg 498  Q
    ||||| ||||||||||||||||||||||||||||| | |||||||| ||||| |||||||||||||||||||||||||||||||||||||||||| | |     
T  55309358 caaaaattagtgagggaaatttagtgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaaggaatttgtgaggaatttcattt 55309259  T
Q  499 ttttctgtcacnaattnccctccctaattttgcnttt 535  Q
    ||||| ||||| |||| ||||| |||||||||| |||    
T  55309258 ttttccgtcactaatttccctcgctaattttgctttt 55309222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 400 - 535
Target Start/End: Original strand, 22168260 - 22168395
Alignment:
Q  400 caaaagttagtgagggaaatttagtgagggaaaacatgaaatccctttctaantccgtcactaaattttgcgaccaaggaatttgtgaggaattttatgt 499  Q
    ||||| ||||||||||| |||||||||||||||||||||||| ||| ||||| |||| |||||||||||||||||||||||||| |||||||||| || |    
T  22168260 caaaaattagtgagggatatttagtgagggaaaacatgaaattcctctctaattccggcactaaattttgcgaccaaggaatttatgaggaatttcattt 22168359  T
Q  500 tttctgtcacnaattnccctccctaattttgcnttt 535  Q
    |||| ||||| |||| ||||| |||||||||| |||    
T  22168360 tttccgtcactaatttccctcgctaattttgctttt 22168395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 400 - 535
Target Start/End: Complemental strand, 37378768 - 37378633
Alignment:
Q  400 caaaagttagtgagggaaatttagtgagggaaaacatgaaatccctttctaantccgtcactaaattttgcgaccaaggaatttgtgaggaattttatgt 499  Q
    ||||| |||||||||||||||| ||||||||||||||||||||||| ||||| ||||||||||||||||||||||| |||||||||||||||||| || |    
T  37378768 caaaaattagtgagggaaattttgtgagggaaaacatgaaatccctctctaattccgtcactaaattttgcgaccatggaatttgtgaggaatttcattt 37378669  T
Q  500 tttctgtcacnaattnccctccctaattttgcnttt 535  Q
    |||| ||||  ||||  |||| |||||||||| |||    
T  37378668 tttccgtcaataattttcctcgctaattttgctttt 37378633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 400 - 535
Target Start/End: Complemental strand, 46286374 - 46286239
Alignment:
Q  400 caaaagttagtgagggaaatttagtgagggaaaacatgaaatccctttctaantccgtcactaaattttgcgaccaaggaatttgtgaggaattttatgt 499  Q
    ||||| |||||||||||||||| |||||||||||| |||||||||| ||||| ||||||||||||||||||||||| | ||||||||||||||||||| |    
T  46286374 caaaaattagtgagggaaattttgtgagggaaaacgtgaaatccctctctaattccgtcactaaattttgcgaccatgaaatttgtgaggaattttattt 46286275  T
Q  500 tttctgtcacnaattnccctccctaattttgcnttt 535  Q
    |||| ||||| |||| || || |||||||||| |||    
T  46286274 tttccgtcactaatttccgtcactaattttgctttt 46286239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 400 - 530
Target Start/End: Original strand, 1638439 - 1638569
Alignment:
Q  400 caaaagttagtgagggaaatttagtgagggaaaacatgaaatccctttctaantccgtcactaaattttgcgaccaaggaatttgtgaggaattttatgt 499  Q
    ||||| ||||||||| |||||||||||||||||||||||||| |||  |||| |||||||||||||||||||||||| |||| ||||||| ||||||| |    
T  1638439 caaaaattagtgaggaaaatttagtgagggaaaacatgaaattcctccctaattccgtcactaaattttgcgaccaaagaatatgtgagggattttattt 1638538  T
Q  500 tttctgtcacnaattnccctccctaattttg 530  Q
    |||| ||||| |||| |||||||||||||||    
T  1638539 tttccgtcactaatttccctccctaattttg 1638569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 406 - 535
Target Start/End: Complemental strand, 27040164 - 27040035
Alignment:
Q  406 ttagtgagggaaatttagtgagggaaaacatgaaatccctttctaantccgtcactaaattttgcgaccaaggaatttgtgaggaattttatgttttctg 505  Q
    |||||||||||||||| |||||||||||| |||||||||| ||||| ||||||||||||||||||||||| | ||||||||||||||||| | ||||| |    
T  27040164 ttagtgagggaaattttgtgagggaaaacgtgaaatccctctctaattccgtcactaaattttgcgaccatgaaatttgtgaggaattttcttttttccg 27040065  T
Q  506 tcacnaattnccctccctaattttgcnttt 535  Q
    |||| |||| ||||| |||||||||| |||    
T  27040064 tcactaatttccctcgctaattttgctttt 27040035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 400 - 535
Target Start/End: Original strand, 19839171 - 19839306
Alignment:
Q  400 caaaagttagtgagggaaatttagtgagggaaaacatgaaatccctttctaantccgtcactaaattttgcgaccaaggaatttgtgaggaattttatgt 499  Q
    ||||| |||| |||| ||||||||||||||||||| | |||||||| ||||| |||||||||||||||||||||||||||||||||||| ||||| || |    
T  19839171 caaaaattagcgaggaaaatttagtgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaaggaatttgtgagaaatttcattt 19839270  T
Q  500 tttctgtcacnaattnccctccctaattttgcnttt 535  Q
    |||| ||||| |||| ||||| |||||||||| |||    
T  19839271 tttccgtcactaatttccctcgctaattttgctttt 19839306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 76; E-Value: 7e-35
Query Start/End: Original strand, 400 - 535
Target Start/End: Original strand, 8878875 - 8879010
Alignment:
Q  400 caaaagttagtgagggaaatttagtgagggaaaacatgaaatccctttctaantccgtcactaaattttgcgaccaaggaatttgtgaggaattttatgt 499  Q
    ||||| ||||||| |||||||||||||||||||||||||||||||| ||||| || ||||||||||||||||||||| |||||| ||||  ||||||| |    
T  8878875 caaaaattagtgacggaaatttagtgagggaaaacatgaaatccctctctaattctgtcactaaattttgcgaccaacgaatttctgagagattttattt 8878974  T
Q  500 tttctgtcacnaattnccctccctaattttgcnttt 535  Q
    |||| ||||| |||| ||||| || ||||||| |||    
T  8878975 tttccgtcactaatttccctctctgattttgctttt 8879010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 76; E-Value: 7e-35
Query Start/End: Original strand, 400 - 535
Target Start/End: Original strand, 18051831 - 18051966
Alignment:
Q  400 caaaagttagtgagggaaatttagtgagggaaaacatgaaatccctttctaantccgtcactaaattttgcgaccaaggaatttgtgaggaattttatgt 499  Q
    ||||| |||||||||||||||| |||||||||||| |||||||||| ||||| ||||||||||||||||||||||  | |||||||||| ||||| || |    
T  18051831 caaaaattagtgagggaaattttgtgagggaaaacgtgaaatccctctctaattccgtcactaaattttgcgaccgtgaaatttgtgagaaatttcattt 18051930  T
Q  500 tttctgtcacnaattnccctccctaattttgcnttt 535  Q
    |||| ||||| |||| ||||| |||||||||| |||    
T  18051931 tttccgtcactaatttccctcactaattttgctttt 18051966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 76; E-Value: 7e-35
Query Start/End: Original strand, 400 - 494
Target Start/End: Complemental strand, 22156746 - 22156652
Alignment:
Q  400 caaaagttagtgagggaaatttagtgagggaaaacatgaaatccctttctaantccgtcactaaattttgcgaccaaggaatttgtgaggaattt 494  Q
    ||||| ||||||||||| |||||||||||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||||| |||||    
T  22156746 caaaaattagtgagggatatttagtgagggaaaacatgaaatccctctctaattccgtcactaaattttgcgaccaaggaatttgtgagaaattt 22156652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 406 - 535
Target Start/End: Original strand, 5473847 - 5473976
Alignment:
Q  406 ttagtgagggaaatttagtgagggaaaacatgaaatccctttctaantccgtcactaaattttgcgaccaaggaatttgtgaggaattttatgttttctg 505  Q
    ||||||||| ||||||||||||||||||| | |||||||| | ||| |||||||||||||||||||||||||||||| ||||||||||| || ||| | |    
T  5473847 ttagtgaggaaaatttagtgagggaaaacgtaaaatccctctttaattccgtcactaaattttgcgaccaaggaattggtgaggaatttcatttttcccg 5473946  T
Q  506 tcacnaattnccctccctaattttgcnttt 535  Q
    |||| |||| ||||| |||||||||| |||    
T  5473947 tcactaatttccctcgctaattttgctttt 5473976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 406 - 535
Target Start/End: Complemental strand, 45532718 - 45532589
Alignment:
Q  406 ttagtgagggaaatttagtgagggaaaacatgaaatccctttctaantccgtcactaaattttgcgaccaaggaatttgtgaggaattttatgttttctg 505  Q
    ||||||||||||||||||||||||||||| | |||||||| ||||| ||||||| |||||||||||| |||| |||||||||||||||| || ||||| |    
T  45532718 ttagtgagggaaatttagtgagggaaaacgtaaaatccctctctaattccgtcattaaattttgcgatcaagaaatttgtgaggaatttcattttttccg 45532619  T
Q  506 tcacnaattnccctccctaattttgcnttt 535  Q
    |||| |||| |||||  ||||||||| |||    
T  45532618 tcactaatttccctcgttaattttgctttt 45532589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 400 - 529
Target Start/End: Original strand, 38223502 - 38223631
Alignment:
Q  400 caaaagttagtgagggaaatttagtgagggaaaacatgaaatccctttctaantccgtcactaaattttgcgaccaaggaatttgtgaggaattttatgt 499  Q
    ||||| || ||||||||||||||| ||||||||||   |||||||| ||||| || |||||||||||||||||||||||||||||| ||||||||||| |    
T  38223502 caaaaatttgtgagggaaatttagagagggaaaacgcaaaatccctctctaattctgtcactaaattttgcgaccaaggaatttgtaaggaattttattt 38223601  T
Q  500 tttctgtcacnaattnccctccctaatttt 529  Q
    |||| ||||| |||  ||||||||||||||    
T  38223602 tttccgtcactaatctccctccctaatttt 38223631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 416 - 535
Target Start/End: Complemental strand, 4586887 - 4586768
Alignment:
Q  416 aaatttagtgagggaaaacatgaaatccctttctaantccgtcactaaattttgcgaccaaggaatttgtgaggaattttatgttttctgtcacnaattn 515  Q
    ||||||||||||||||||| | |||||||| ||||| |||||||||||||||| ||| ||||||||||||||||||||| || ||||| ||||| ||||     
T  4586887 aaatttagtgagggaaaacgtaaaatccctctctaattccgtcactaaattttacgatcaaggaatttgtgaggaatttcattttttccgtcactaattt 4586788  T
Q  516 ccctccctaattttgcnttt 535  Q
    ||||| |||||||||| |||    
T  4586787 ccctcgctaattttgctttt 4586768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 406 - 535
Target Start/End: Complemental strand, 13565054 - 13564925
Alignment:
Q  406 ttagtgagggaaatttagtgagggaaaacatgaaatccctttctaantccgtcactaaattttgcgaccaaggaatttgtgaggaattttatgttttctg 505  Q
    ||||||||||||||||||||||||||||| | |||| ||| ||||| ||||||||||||||||  ||||||||||||||||| |||||| ||  |||| |    
T  13565054 ttagtgagggaaatttagtgagggaaaacgtaaaattcctctctaattccgtcactaaattttatgaccaaggaatttgtgatgaatttcattatttccg 13564955  T
Q  506 tcacnaattnccctccctaattttgcnttt 535  Q
    |||| |||| ||||| |||||||||| |||    
T  13564954 tcactaatttccctcgctaattttgctttt 13564925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 420 - 529
Target Start/End: Complemental strand, 9670604 - 9670495
Alignment:
Q  420 ttagtgagggaaaacatgaaatccctttctaantccgtcactaaattttgcgaccaaggaatttgtgaggaattttatgttttctgtcacnaattnccct 519  Q
    ||||||||||||||| | |||| ||| ||||| |||||||||||||||||||||||||||||||||||||||||| || ||||| ||||| |||| ||||    
T  9670604 ttagtgagggaaaacgtaaaattcctctctaattccgtcactaaattttgcgaccaaggaatttgtgaggaatttcattttttccgtcactaatttccct 9670505  T
Q  520 ccctaatttt 529  Q
    | ||||||||    
T  9670504 cgctaatttt 9670495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 400 - 529
Target Start/End: Complemental strand, 19680569 - 19680440
Alignment:
Q  400 caaaagttagtgagggaaatttagtgagggaaaacatgaaatccctttctaantccgtcactaaattttgcgaccaaggaatttgtgaggaattttatgt 499  Q
    ||||| ||| |||||||||||| |||||||||||| | |||||||| ||||| ||||||||||||||||||||||| | |||||||||||||||| || |    
T  19680569 caaaaattaatgagggaaattttgtgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccatgaaatttgtgaggaatttcattt 19680470  T
Q  500 tttctgtcacnaattnccctccctaatttt 529  Q
    |||| ||||| || | ||||| ||||||||    
T  19680469 tttccgtcactaaattccctcactaatttt 19680440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 420 - 535
Target Start/End: Original strand, 29625337 - 29625452
Alignment:
Q  420 ttagtgagggaaaacatgaaatccctttctaantccgtcactaaattttgcgaccaaggaatttgtgaggaattttatgttttctgtcacnaattnccct 519  Q
    ||||||||||||||| |||||||||| ||||| ||||||||||||||||||||| | |||||||||||||||||| || ||||| ||||  |||| ||||    
T  29625337 ttagtgagggaaaacgtgaaatccctctctaattccgtcactaaattttgcgactatggaatttgtgaggaatttcattttttccgtcattaatttccct 29625436  T
Q  520 ccctaattttgcnttt 535  Q
    | |||||||||| |||    
T  29625437 cgctaattttgctttt 29625452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 420 - 535
Target Start/End: Original strand, 38645762 - 38645877
Alignment:
Q  420 ttagtgagggaaaacatgaaatccctttctaantccgtcactaaattttgcgaccaaggaatttgtgaggaattttatgttttctgtcacnaattnccct 519  Q
    ||||||||||||||| | |||||||| ||||| |||||||||||||||||||||||| ||||||||||||||||| || ||||| ||||  |||| ||||    
T  38645762 ttagtgagggaaaacgtaaaatccctctctaactccgtcactaaattttgcgaccaaagaatttgtgaggaatttcattttttccgtcaataatttccct 38645861  T
Q  520 ccctaattttgcnttt 535  Q
    | |||||||||| |||    
T  38645862 cgctaattttgctttt 38645877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 401 - 535
Target Start/End: Original strand, 44783475 - 44783610
Alignment:
Q  401 aaaagttagtgagggaaatttagtgagggaaaacatgaaatccct-ttctaantccgtcactaaattttgcgaccaaggaatttgtgaggaattttatgt 499  Q
    |||| ||| ||||||| |||||  || |||||||||||||||||| |||||| ||||||| |||||||||||||||||||||||||||||||||| || |    
T  44783475 aaaaattaatgagggatatttatcgaaggaaaacatgaaatccctcttctaattccgtcattaaattttgcgaccaaggaatttgtgaggaatttcattt 44783574  T
Q  500 tttctgtcacnaattnccctccctaattttgcnttt 535  Q
    |||| ||||| |||| ||||| ||| |||||| |||    
T  44783575 tttccgtcactaatttccctcgctagttttgctttt 44783610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 401 - 535
Target Start/End: Original strand, 12071955 - 12072089
Alignment:
Q  401 aaaagttagtgagggaaatttagtgagggaaaacatgaaatccctttctaantccgtcactaaattttgcgaccaaggaatttgtgaggaattttatgtt 500  Q
    |||| ||||||||||| ||||||||| ||||||||| |||||||| ||||| |||||||||||||||||||| |||||||||| ||| |||||| || ||    
T  12071955 aaaaattagtgagggatatttagtgaaggaaaacataaaatccctctctaattccgtcactaaattttgcgatcaaggaatttatgaagaatttcatttt 12072054  T
Q  501 ttctgtcacnaattnccctccctaattttgcnttt 535  Q
    |||  |||| |||| | ||| |||||||||| |||    
T  12072055 ttcgatcactaatttcgctcgctaattttgctttt 12072089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 400 - 529
Target Start/End: Complemental strand, 24682470 - 24682343
Alignment:
Q  400 caaaagttagtgagggaaatttagtgagggaaaacatgaaatccctttctaantccgtcactaaattttgcgaccaaggaatttgtgaggaattttatgt 499  Q
    ||||| ||||||||||||||| |   ||||||||| |||||||||| ||||| |||  |||||||||||||||||| ||||||||||||||||||||| |    
T  24682470 caaaaattagtgagggaaattgaa--agggaaaacgtgaaatccctctctaattccaccactaaattttgcgaccatggaatttgtgaggaattttattt 24682373  T
Q  500 tttctgtcacnaattnccctccctaatttt 529  Q
    |||| ||||  |||| ||||||||||||||    
T  24682372 tttccgtcattaatttccctccctaatttt 24682343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 400 - 529
Target Start/End: Original strand, 9913250 - 9913379
Alignment:
Q  400 caaaagttagtgagggaaatttagtgagggaaaacatgaaatccctttctaantccgtcactaaattttgcgaccaaggaatttgtgaggaattttatgt 499  Q
    ||||| || ||||||||| ||||| |||||||||| |||||||||| ||||| || |||||||||||||||||||||| || |||||||| |||| || |    
T  9913250 caaaaatttgtgagggaattttagagagggaaaacgtgaaatccctctctaattctgtcactaaattttgcgaccaagaaaattgtgagggatttaattt 9913349  T
Q  500 tttctgtcacnaattnccctccctaatttt 529  Q
    |||| ||||| ||||  |||||||||||||    
T  9913350 tttccgtcactaattttcctccctaatttt 9913379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 416 - 529
Target Start/End: Original strand, 25026565 - 25026678
Alignment:
Q  416 aaatttagtgagggaaaacatgaaatccctttctaantccgtcactaaattttgcgaccaaggaatttgtgaggaattttatgttttctgtcacnaattn 515  Q
    ||||||||||||||||||| | ||||| || ||||| ||||||||||||||||||||| |||||||||||||| ||||| || ||||| ||||| ||||     
T  25026565 aaatttagtgagggaaaacgtaaaatctctctctaattccgtcactaaattttgcgactaaggaatttgtgagaaatttcattttttccgtcactaattt 25026664  T
Q  516 ccctccctaatttt 529  Q
    ||||| ||||||||    
T  25026665 ccctcactaatttt 25026678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 416 - 535
Target Start/End: Complemental strand, 13028945 - 13028826
Alignment:
Q  416 aaatttagtgagggaaaacatgaaatccctttctaantccgtcactaaattttgcgaccaaggaatttgtgaggaattttatgttttctgtcacnaattn 515  Q
    ||||||||||||||||||| | |||||||| ||||| ||||||||||||||||||||||||| |||||||||||||||  || ||||| ||||| ||||     
T  13028945 aaatttagtgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaagaaatttgtgaggaattgcattttttccgtcactaattt 13028846  T
Q  516 ccctccctaattttgcnttt 535  Q
     |||| |||| ||||| |||    
T  13028845 tcctcgctaagtttgctttt 13028826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 416 - 535
Target Start/End: Original strand, 18714910 - 18715029
Alignment:
Q  416 aaatttagtgagggaaaacatgaaatccctttctaantccgtcactaaattttgcgaccaaggaatttgtgaggaattttatgttttctgtcacnaattn 515  Q
    ||||||||| ||| ||||| | |||||||| ||||| ||||||||||||||||| ||||||||||||||||||||||||||| ||||| |||||  |||     
T  18714910 aaatttagtaaggaaaaacgtaaaatccctctctaattccgtcactaaattttgagaccaaggaatttgtgaggaattttattttttccgtcacttattt 18715009  T
Q  516 ccctccctaattttgcnttt 535  Q
    ||||| ||||| |||| |||    
T  18715010 ccctcgctaatattgctttt 18715029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 400 - 535
Target Start/End: Complemental strand, 30269133 - 30268998
Alignment:
Q  400 caaaagttagtgagggaaatttagtgagggaaaacatgaaatccctttctaantccgtcactaaattttgcgaccaaggaatttgtgaggaattttatgt 499  Q
    ||||| |||||||||||||||||| |||||||||  | ||||| || ||||| ||||||||||||||||||||||||  |||||| ||||||||| || |    
T  30269133 caaaaattagtgagggaaatttagcgagggaaaatgtaaaatctctctctaattccgtcactaaattttgcgaccaaataatttgcgaggaatttcattt 30269034  T
Q  500 tttctgtcacnaattnccctccctaattttgcnttt 535  Q
    |||| |||||  ||| ||||| |||||||||| |||    
T  30269033 tttccgtcactgatttccctcgctaattttgctttt 30268998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 400 - 535
Target Start/End: Original strand, 30283056 - 30283191
Alignment:
Q  400 caaaagttagtgagggaaatttagtgagggaaaacatgaaatccctttctaantccgtcactaaattttgcgaccaaggaatttgtgaggaattttatgt 499  Q
    ||||| |||||||||||||||||| |||||||||  | ||||| || ||||| ||||||||||||||||||||||||  |||||| ||||||||| || |    
T  30283056 caaaaattagtgagggaaatttagcgagggaaaatgtaaaatctctctctaattccgtcactaaattttgcgaccaaataatttgcgaggaatttcattt 30283155  T
Q  500 tttctgtcacnaattnccctccctaattttgcnttt 535  Q
    |||| |||||  ||| ||||| |||||||||| |||    
T  30283156 tttccgtcactgatttccctcgctaattttgctttt 30283191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 420 - 535
Target Start/End: Original strand, 30507999 - 30508114
Alignment:
Q  420 ttagtgagggaaaacatgaaatccctttctaantccgtcactaaattttgcgaccaaggaatttgtgaggaattttatgttttctgtcacnaattnccct 519  Q
    ||||||||||||||  | |||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||  |||||  |||  |||    
T  30507999 ttagtgagggaaaatgtaaaatccctctctaattccgtcactaaattttgcgaccaaggaatttgtgaggaattttatttttttcgtcacagattttcct 30508098  T
Q  520 ccctaattttgcnttt 535  Q
    | |||||||||| |||    
T  30508099 cgctaattttgctttt 30508114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 423 - 535
Target Start/End: Complemental strand, 9238747 - 9238635
Alignment:
Q  423 gtgagggaaaacatgaaatccctttctaantccgtcactaaattttgcgaccaaggaatttgtgaggaattttatgttttctgtcacnaattnccctccc 522  Q
    |||||||||||| | ||||  || ||||| ||||||||||||||||||||||||| |||||||||||||||| || ||||| ||||| |||| ||||| |    
T  9238747 gtgagggaaaacgtaaaatttctctctaattccgtcactaaattttgcgaccaagaaatttgtgaggaatttcattttttccgtcactaatttccctcgc 9238648  T
Q  523 taattttgcnttt 535  Q
    ||||||||| |||    
T  9238647 taattttgctttt 9238635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 420 - 529
Target Start/End: Complemental strand, 9239406 - 9239297
Alignment:
Q  420 ttagtgagggaaaacatgaaatccctttctaantccgtcactaaattttgcgaccaaggaatttgtgaggaattttatgttttctgtcacnaattnccct 519  Q
    ||||||||||||||| |||||||||| ||||| ||||||| | |||||||||||||||||||||||||| ||||| || ||||| ||||| |||| ||||    
T  9239406 ttagtgagggaaaacgtgaaatccctctctaattccgtcattcaattttgcgaccaaggaatttgtgagcaatttcattttttccgtcactaatttccct 9239307  T
Q  520 ccctaatttt 529  Q
    |  |||||||    
T  9239306 cgttaatttt 9239297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 400 - 514
Target Start/End: Complemental strand, 18744215 - 18744101
Alignment:
Q  400 caaaagttagtgagggaaatttagtgagggaaaacatgaaatccctttctaantccgtcactaaattttgcgaccaaggaatttgtgaggaattttatgt 499  Q
    ||||| |||||||||||||||| |||||||||||| |||||||||| ||||| ||||||||||||||||  ||||| | |||||||||| ||||| || |    
T  18744215 caaaaattagtgagggaaattttgtgagggaaaacgtgaaatccctctctaattccgtcactaaattttatgaccatgaaatttgtgagaaatttcattt 18744116  T
Q  500 tttctgtcacnaatt 514  Q
    |||| ||||| ||||    
T  18744115 tttccgtcactaatt 18744101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 401 - 530
Target Start/End: Original strand, 36689670 - 36689799
Alignment:
Q  401 aaaagttagtgagggaaatttagtgagggaaaacatgaaatccctttctaantccgtcactaaattttgcgaccaaggaatttgtgaggaattttatgtt 500  Q
    |||| |||| ||||||||||||||| |||||||| |||||||||| ||||| ||||||||||||||||||||||||  ||||| |||| ||||| || ||    
T  36689670 aaaaattagcgagggaaatttagtgtgggaaaacgtgaaatccctctctaattccgtcactaaattttgcgaccaaaaaatttatgagaaatttcatttt 36689769  T
Q  501 ttctgtcacnaattnccctccctaattttg 530  Q
    |||  |||| |||| |||||  ||||||||    
T  36689770 ttccatcactaatttccctcgttaattttg 36689799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 420 - 535
Target Start/End: Complemental strand, 7112071 - 7111956
Alignment:
Q  420 ttagtgagggaaaacatgaaatccctttctaantccgtcactaaattttgcgaccaaggaatttgtgaggaattttatgttttctgtcacnaattnccct 519  Q
    ||||||||||||||  | |||||||| | ||| |||||||||||||||| |||||||| |||||||||||||||| || ||||| ||||| |||| ||||    
T  7112071 ttagtgagggaaaatgtaaaatccctctataattccgtcactaaatttttcgaccaagaaatttgtgaggaatttcattttttccgtcactaatttccct 7111972  T
Q  520 ccctaattttgcnttt 535  Q
    | |||||||||| |||    
T  7111971 cgctaattttgctttt 7111956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 400 - 535
Target Start/End: Original strand, 16915361 - 16915496
Alignment:
Q  400 caaaagttagtgagggaaatttagtgagggaaaacatgaaatccctttctaantccgtcactaaattttgcgaccaaggaatttgtgaggaattttatgt 499  Q
    ||||| ||||||| |||||||||||||||||||| |||||||| || ||||| |  |||||||||||||||||||||  ||||||||||  ||||||| |    
T  16915361 caaaaattagtgacggaaatttagtgagggaaaatatgaaatctctctctaattttgtcactaaattttgcgaccaacaaatttgtgagagattttattt 16915460  T
Q  500 tttctgtcacnaattnccctccctaattttgcnttt 535  Q
    ||||  |||| ||||  ||||||| ||||||| |||    
T  16915461 tttccatcactaattttcctccctgattttgctttt 16915496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 420 - 535
Target Start/End: Original strand, 38619859 - 38619974
Alignment:
Q  420 ttagtgagggaaaacatgaaatccctttctaantccgtcactaaattttgcgaccaaggaatttgtgaggaattttatgttttctgtcacnaattnccct 519  Q
    ||||||||||||||| | |||||||| ||||| |||||||||||||||| ||||||| |||||| |||||||||| || ||||| ||||  |||| ||||    
T  38619859 ttagtgagggaaaacgtaaaatccctctctaattccgtcactaaattttacgaccaaagaatttatgaggaatttcattttttccgtcattaatttccct 38619958  T
Q  520 ccctaattttgcnttt 535  Q
    | |||||||||| |||    
T  38619959 cgctaattttgctttt 38619974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 400 - 530
Target Start/End: Complemental strand, 30568144 - 30568014
Alignment:
Q  400 caaaagttagtgagggaaatttagtgagggaaaacatgaaatccctttctaantccgtcactaaattttgcgaccaaggaatttgtgaggaattttatgt 499  Q
    ||||| ||||||| |||||||| |||||||||||| | ||||| || ||||| ||||||| |||||||| ||||||  ||||||||||||||||| || |    
T  30568144 caaaaattagtgaaggaaattttgtgagggaaaacgtaaaatctctctctaattccgtcattaaattttacgaccatagaatttgtgaggaatttcattt 30568045  T
Q  500 tttctgtcacnaattnccctccctaattttg 530  Q
    |||| ||||| |||| | ||| |||||||||    
T  30568044 tttccgtcactaatttcgctcgctaattttg 30568014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 420 - 514
Target Start/End: Original strand, 14944758 - 14944852
Alignment:
Q  420 ttagtgagggaaaacatgaaatccctttctaantccgtcactaaattttgcgaccaaggaatttgtgaggaattttatgttttctgtcacnaatt 514  Q
    ||||||||||||||| | |||||||| ||||| ||||||||||||||||||||||||| |||||||||||||||| || ||||  ||||| ||||    
T  14944758 ttagtgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaagaaatttgtgaggaatttcattttttacgtcactaatt 14944852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 416 - 535
Target Start/End: Original strand, 54539294 - 54539413
Alignment:
Q  416 aaatttagtgagggaaaacatgaaatccctttctaantccgtcactaaattttgcgaccaaggaatttgtgaggaattttatgttttctgtcacnaattn 515  Q
    ||||||||||||||||||| | ||||| || | ||| | ||||||||||||||||||| |||||||||||||||||||| || ||||| ||||| ||||     
T  54539294 aaatttagtgagggaaaacgtaaaatcactctttaattgcgtcactaaattttgcgactaaggaatttgtgaggaatttcattttttccgtcactaattt 54539393  T
Q  516 ccctccctaattttgcnttt 535  Q
     |||  |||||||||| |||    
T  54539394 tccttgctaattttgctttt 54539413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 420 - 537
Target Start/End: Complemental strand, 4606954 - 4606837
Alignment:
Q  420 ttagtgagggaaaacatgaaatccctttctaantccgtcactaaattttgcgaccaaggaatttgtgaggaattttatgttttctgtcacnaattnccct 519  Q
    ||||||||||||||  ||||||| || ||||| ||||||||||||||||||| ||||| |||||||||   ||||||| || || ||||| |||| ||||    
T  4606954 ttagtgagggaaaaagtgaaatcactctctaattccgtcactaaattttgcggccaagaaatttgtgacagattttattttgtccgtcactaatttccct 4606855  T
Q  520 ccctaattttgcntttcc 537  Q
    |||||||||| | |||||    
T  4606854 ccctaattttacttttcc 4606837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 400 - 530
Target Start/End: Original strand, 29238415 - 29238545
Alignment:
Q  400 caaaagttagtgagggaaatttagtgagggaaaacatgaaatccctttctaantccgtcactaaattttgcgaccaaggaatttgtgaggaattttatgt 499  Q
    ||||| |||| || ||||||||||||||| ||||||| ||||| || ||||| || ||||||||||||||  ||||| |||||||||||  ||||||| |    
T  29238415 caaaaattagcgatggaaatttagtgaggaaaaacataaaatctctatctaattctgtcactaaattttgaaaccaaagaatttgtgagagattttattt 29238514  T
Q  500 tttctgtcacnaattnccctccctaattttg 530  Q
    |||| ||||  |||| ||||||||| |||||    
T  29238515 tttccgtcaataatttccctccctagttttg 29238545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 420 - 529
Target Start/End: Original strand, 12105995 - 12106103
Alignment:
Q  420 ttagtgagggaaaacatgaaatccctttctaantccgtcactaaattttgcgaccaaggaatttgtgaggaattttatgttttctgtcacnaattnccct 519  Q
    ||||||||||||||||||||| |||| ||||| |||||||||||| ||||||||||| |||||| |||| |||||||| |||||  |||  |||| ||||    
T  12105995 ttagtgagggaaaacatgaaacccctctctaattccgtcactaaa-tttgcgaccaaagaatttatgagaaattttattttttccatcaataatttccct 12106093  T
Q  520 ccctaatttt 529  Q
    | ||||||||    
T  12106094 cgctaatttt 12106103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 401 - 535
Target Start/End: Original strand, 3612988 - 3613123
Alignment:
Q  401 aaaagttagtgagggaaatttagtgagggaaaacatgaaatccctttctaantccgtcactaaattttgcgaccaaggaatttgtgaggaattttatgtt 500  Q
    |||| |||||||| ||| ||||| |||| ||||| |||||| ||| ||||| | |||||||||| |||||||||||||||||||||||| | ||||| ||    
T  3612988 aaaacttagtgagagaattttagagaggaaaaacgtgaaattcctctctaatttcgtcactaaaatttgcgaccaaggaatttgtgagggaatttatttt 3613087  T
Q  501 ttct-gtcacnaattnccctccctaattttgcnttt 535  Q
    || | | ||| || | |||||||||||||||| |||    
T  3613088 ttttagccaccaaattccctccctaattttgctttt 3613123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 416 - 535
Target Start/End: Complemental strand, 4627207 - 4627088
Alignment:
Q  416 aaatttagtgagggaaaacatgaaatccctttctaantccgtcactaaattttgcgaccaaggaatttgtgaggaattttatgttttctgtcacnaattn 515  Q
    ||||||||||||||||||  | ||||| || ||||| | |||||||||||||| ||| |||| |||||||||||||||| || ||||| ||||  ||||     
T  4627207 aaatttagtgagggaaaatgtaaaatctctctctaatttcgtcactaaattttacgatcaagaaatttgtgaggaatttcattttttccgtcattaattt 4627108  T
Q  516 ccctccctaattttgcnttt 535  Q
    ||||| |||||||||| |||    
T  4627107 ccctcgctaattttgctttt 4627088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 400 - 535
Target Start/End: Complemental strand, 30420178 - 30420043
Alignment:
Q  400 caaaagttagtgagggaaatttagtgagggaaaacatgaaatccctttctaantccgtcactaaattttgcgaccaaggaatttgtgaggaattttatgt 499  Q
    ||||| ||||||||  |||||||| | | ||||||||||||| ||| ||||| | |||||||||||  | |||||||| ||||||| | ||||||||| |    
T  30420178 caaaaattagtgagaaaaatttagagtgagaaaacatgaaattcctctctaatttcgtcactaaatgcttcgaccaagtaatttgtaatgaattttattt 30420079  T
Q  500 tttctgtcacnaattnccctccctaattttgcnttt 535  Q
    |||| ||||| ||||  ||||||||||||||| |||    
T  30420078 tttccgtcactaattttcctccctaattttgctttt 30420043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 410 - 480
Target Start/End: Complemental strand, 37761977 - 37761907
Alignment:
Q  410 tgagggaaatttagtgagggaaaacatgaaatccctttctaantccgtcactaaattttgcgaccaaggaa 480  Q
    ||||| ||||||||||||||||||| |||||||||| ||||| ||||||||||||||||||||||| ||||    
T  37761977 tgaggaaaatttagtgagggaaaacgtgaaatccctctctaattccgtcactaaattttgcgaccacggaa 37761907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 420 - 514
Target Start/End: Original strand, 6553816 - 6553910
Alignment:
Q  420 ttagtgagggaaaacatgaaatccctttctaantccgtcactaaattttgcgaccaaggaatttgtgaggaattttatgttttctgtcacnaatt 514  Q
    ||||||||||| |||||||||||||| ||||| |  || ||||||||||||||||||| ||||| ||||| ||||||| ||||| ||||| ||||    
T  6553816 ttagtgagggataacatgaaatccctctctaattatgttactaaattttgcgaccaagaaatttatgagggattttattttttccgtcactaatt 6553910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 400 - 530
Target Start/End: Original strand, 39234934 - 39235063
Alignment:
Q  400 caaaagttagtgagggaaatttagtgagggaaaacatgaaatccctttctaantccgtcactaaattttgcgaccaaggaatttgtgaggaattttatg- 498  Q
    ||||| |||||||||||||||||| || ||||||| ||||||| ||  |||| |  || ||||||||||||||||||  |||||||||| |||||||||     
T  39234934 caaaaattagtgagggaaatttagagaaggaaaacgtgaaatctct--ctaattttgttactaaattttgcgaccaaaaaatttgtgagaaattttatgt 39235031  T
Q  499 ttttctgtcacnaattnccctccctaattttg 530  Q
    ||||| || || | || |||||||||||||||    
T  39235032 ttttccgttacaagtttccctccctaattttg 39235063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 448 - 535
Target Start/End: Original strand, 42055437 - 42055524
Alignment:
Q  448 ctaantccgtcactaaattttgcgaccaaggaatttgtgaggaattttatgttttctgtcacnaattnccctccctaattttgcnttt 535  Q
    |||| ||||| |||||||||||||||||||||||||||||||||||| || ||||  |||||  ||| ||||| |||||||||| |||    
T  42055437 ctaattccgttactaaattttgcgaccaaggaatttgtgaggaatttcatttttttcgtcacagatttccctcgctaattttgctttt 42055524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 424 - 514
Target Start/End: Original strand, 313603 - 313693
Alignment:
Q  424 tgagggaaaacatgaaatccctttctaantccgtcactaaattttgcgaccaaggaatttgtgaggaattttatgttttctgtcacnaatt 514  Q
    ||||||| |||||||||||||| ||||| |  || |||||||||||||||||| |||||| ||||| ||||||| ||||| ||||| ||||    
T  313603 tgagggataacatgaaatccctctctaattatgttactaaattttgcgaccaaagaatttatgagggattttattttttccgtcactaatt 313693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 416 - 529
Target Start/End: Original strand, 34557191 - 34557304
Alignment:
Q  416 aaatttagtgagggaaaacatgaaatccctttctaantccgtcactaaattttgcgaccaaggaatttgtgaggaattttatgttttctgtcacnaattn 515  Q
    |||||||| |||||||||  | |||||  | | ||| ||||||| ||||||||| ||||||||||||||||| | ||||||| ||||| ||||| ||||     
T  34557191 aaatttagcgagggaaaaggtaaaatctgtctttaattccgtcattaaattttgtgaccaaggaatttgtgaaggattttattttttccgtcactaattt 34557290  T
Q  516 ccctccctaatttt 529  Q
     |||| ||||||||    
T  34557291 tcctcactaatttt 34557304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 416 - 472
Target Start/End: Original strand, 45091282 - 45091338
Alignment:
Q  416 aaatttagtgagggaaaacatgaaatccctttctaantccgtcactaaattttgcga 472  Q
    ||||||||||||||||||| | |||||| | ||||| ||||||||||||||||||||    
T  45091282 aaatttagtgagggaaaacgtaaaatccttctctaattccgtcactaaattttgcga 45091338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 431 - 502
Target Start/End: Original strand, 23104371 - 23104442
Alignment:
Q  431 aaacatgaaatccctttctaantccgtcactaaattttgcgaccaaggaatttgtgaggaattttatgtttt 502  Q
    ||||||||||||||| |||||    ||| ||||||||||||||||  |||||||||| ||||||||| ||||    
T  23104371 aaacatgaaatccctctctaatcatgtccctaaattttgcgaccatagaatttgtgatgaattttatttttt 23104442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 401 - 529
Target Start/End: Original strand, 25225092 - 25225218
Alignment:
Q  401 aaaagttagtgagggaaatttagtgagggaaaacatgaaatccctttctaantccgtcactaaattttgcgaccaaggaatttgtgaggaattttatgtt 500  Q
    |||| ||| |||| ||||||||| ||  |||| | |||||||||| ||||| || || | |||||||||||| ||| |||||||  ||  ||||||| ||    
T  25225092 aaaaattaatgagagaaatttagagaaagaaatcgtgaaatccctctctaattctgttattaaattttgcgatcaaagaatttgacag--attttatatt 25225189  T
Q  501 ttctgtcacnaattnccctccctaatttt 529  Q
    ||| ||||   ||| ||||||||||||||    
T  25225190 ttccgtcattgatttccctccctaatttt 25225218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0069 (Bit Score: 97; Significance: 2e-47; HSPs: 1)
Name: scaffold0069
Description:

Target: scaffold0069; HSP #1
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 401 - 537
Target Start/End: Original strand, 10153 - 10289
Alignment:
Q  401 aaaagttagtgagggaaatttagtgagggaaaacatgaaatccctttctaantccgtcactaaattttgcgaccaaggaatttgtgaggaattttatgtt 500  Q
    |||| ||||||||||||||||| |||||||||||||||||||||| ||||| ||||||||||||||||||||  || |||||||||||||||||||||||    
T  10153 aaaaattagtgagggaaatttactgagggaaaacatgaaatccctctctaattccgtcactaaattttgcgattaaagaatttgtgaggaattttatgtt 10252  T
Q  501 ttctgtcacnaattnccctccctaattttgcntttcc 537  Q
    ||| ||||| |||| |||||||||||||||| |||||    
T  10253 ttccgtcacaaatttccctccctaattttgcttttcc 10289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0219 (Bit Score: 92; Significance: 2e-44; HSPs: 1)
Name: scaffold0219
Description:

Target: scaffold0219; HSP #1
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 400 - 535
Target Start/End: Original strand, 19597 - 19732
Alignment:
Q  400 caaaagttagtgagggaaatttagtgagggaaaacatgaaatccctttctaantccgtcactaaattttgcgaccaaggaatttgtgaggaattttatgt 499  Q
    ||||| ||||||||||| |||||||||||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||| || |    
T  19597 caaaaattagtgagggatatttagtgagggaaaacatgaaatccctctctaattccgtcactaaattttgcgaccaaggaatttgtgaggaatttcattt 19696  T
Q  500 tttctgtcacnaattnccctccctaattttgcnttt 535  Q
    |||| ||||| |||| ||||  |||||||||| |||    
T  19697 tttccgtcactaatttcccttgctaattttgctttt 19732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0576 (Bit Score: 88; Significance: 5e-42; HSPs: 1)
Name: scaffold0576
Description:

Target: scaffold0576; HSP #1
Raw Score: 88; E-Value: 5e-42
Query Start/End: Original strand, 400 - 535
Target Start/End: Complemental strand, 9374 - 9239
Alignment:
Q  400 caaaagttagtgagggaaatttagtgagggaaaacatgaaatccctttctaantccgtcactaaattttgcgaccaaggaatttgtgaggaattttatgt 499  Q
    ||||| ||||||||||||||||||||||||||||| | |||||| | ||||| |||||||||||||||||||||||||||||||||||||||||| || |    
T  9374 caaaaattagtgagggaaatttagtgagggaaaacgtaaaatccttctctaattccgtcactaaattttgcgaccaaggaatttgtgaggaatttcattt 9275  T
Q  500 tttctgtcacnaattnccctccctaattttgcnttt 535  Q
    |||| ||||| |||| ||||| |||||||||| |||    
T  9274 tttccgtcactaatttccctcactaattttgctttt 9239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001 (Bit Score: 88; Significance: 5e-42; HSPs: 3)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 88; E-Value: 5e-42
Query Start/End: Original strand, 400 - 535
Target Start/End: Complemental strand, 8255 - 8120
Alignment:
Q  400 caaaagttagtgagggaaatttagtgagggaaaacatgaaatccctttctaantccgtcactaaattttgcgaccaaggaatttgtgaggaattttatgt 499  Q
    ||||| ||||||||||| |||||||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||| |||||||| || |    
T  8255 caaaaattagtgagggatatttagtgagggaaaacatgaaatccctctctaattccgtcactaaattttgcgaccaaggaatttgttaggaatttcattt 8156  T
Q  500 tttctgtcacnaattnccctccctaattttgcnttt 535  Q
    |||| ||||  |||| ||||| |||||||||| |||    
T  8155 tttccgtcattaatttccctcgctaattttgctttt 8120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001; HSP #2
Raw Score: 88; E-Value: 5e-42
Query Start/End: Original strand, 400 - 535
Target Start/End: Complemental strand, 21987 - 21852
Alignment:
Q  400 caaaagttagtgagggaaatttagtgagggaaaacatgaaatccctttctaantccgtcactaaattttgcgaccaaggaatttgtgaggaattttatgt 499  Q
    ||||| ||||||||||| |||||||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||| |||||||| || |    
T  21987 caaaaattagtgagggatatttagtgagggaaaacatgaaatccctctctaattccgtcactaaattttgcgaccaaggaatttgttaggaatttcattt 21888  T
Q  500 tttctgtcacnaattnccctccctaattttgcnttt 535  Q
    |||| ||||  |||| ||||| |||||||||| |||    
T  21887 tttccgtcattaatttccctcgctaattttgctttt 21852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001; HSP #3
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 400 - 535
Target Start/End: Original strand, 84297 - 84432
Alignment:
Q  400 caaaagttagtgagggaaatttagtgagggaaaacatgaaatccctttctaantccgtcactaaattttgcgaccaaggaatttgtgaggaattttatgt 499  Q
    ||||| |||||||||||||||| |||||||||||  |||||||||| ||||| ||||||||||||||||| ||||| | |||||||||||||||| || |    
T  84297 caaaaattagtgagggaaattttgtgagggaaaatgtgaaatccctctctaattccgtcactaaattttgtgaccatgaaatttgtgaggaatttcattt 84396  T
Q  500 tttctgtcacnaattnccctccctaattttgcnttt 535  Q
    |||| ||||| |||| ||||  |||||||||| |||    
T  84397 tttccgtcactaatttcccttgctaattttgctttt 84432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0603 (Bit Score: 86; Significance: 7e-41; HSPs: 1)
Name: scaffold0603
Description:

Target: scaffold0603; HSP #1
Raw Score: 86; E-Value: 7e-41
Query Start/End: Original strand, 400 - 530
Target Start/End: Complemental strand, 6124 - 5994
Alignment:
Q  400 caaaagttagtgagggaaatttagtgagggaaaacatgaaatccctttctaantccgtcactaaattttgcgaccaaggaatttgtgaggaattttatgt 499  Q
    ||||| ||||||||||||||||||||||||||||| | |||||||| ||||| ||| |||||||||||||||||||||||||||||||||||||| || |    
T  6124 caaaaattagtgagggaaatttagtgagggaaaacgtaaaatccctctctaattccatcactaaattttgcgaccaaggaatttgtgaggaatttcattt 6025  T
Q  500 tttctgtcacnaattnccctccctaattttg 530  Q
    |||| ||||| |||| ||||| |||||||||    
T  6024 tttccgtcactaatttccctcgctaattttg 5994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0717 (Bit Score: 85; Significance: 3e-40; HSPs: 1)
Name: scaffold0717
Description:

Target: scaffold0717; HSP #1
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 400 - 535
Target Start/End: Complemental strand, 1064 - 928
Alignment:
Q  400 caaaagttagtgagggaaatttagtgagggaaaacatgaaatccctttctaantccgtcactaaattttgcgaccaaggaatttgtgaggaatttta-tg 498  Q
    ||||| ||||||||||| |||||||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||||| |||||||||||| |     
T  1064 caaaaattagtgagggatatttagtgagggaaaacatgaaatccctctctaattccgtcactaaattttgcgaccaaggaatttatgaggaattttattt 965  T
Q  499 ttttctgtcacnaattnccctccctaattttgcnttt 535  Q
    ||||| ||||  |||| ||||| |||||||||| |||    
T  964 ttttccgtcagtaatttccctcgctaattttgctttt 928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0599 (Bit Score: 84; Significance: 1e-39; HSPs: 1)
Name: scaffold0599
Description:

Target: scaffold0599; HSP #1
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 400 - 535
Target Start/End: Original strand, 7499 - 7634
Alignment:
Q  400 caaaagttagtgagggaaatttagtgagggaaaacatgaaatccctttctaantccgtcactaaattttgcgaccaaggaatttgtgaggaattttatgt 499  Q
    ||||| ||||||||||||||||||||||||||||| | |||||||| ||||| ||||||||||||||||||||||||| ||||| |||||||||| || |    
T  7499 caaaatttagtgagggaaatttagtgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaagaaatttatgaggaatttcatat 7598  T
Q  500 tttctgtcacnaattnccctccctaattttgcnttt 535  Q
    |||| ||||| |||| ||||| |||||||||| |||    
T  7599 tttccgtcactaatttccctcgctaattttgctttt 7634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0502 (Bit Score: 82; Significance: 2e-38; HSPs: 1)
Name: scaffold0502
Description:

Target: scaffold0502; HSP #1
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 400 - 537
Target Start/End: Original strand, 10886 - 11023
Alignment:
Q  400 caaaagttagtgagggaaatttagtgagggaaaacatgaaatccctttctaantccgtcactaaattttgcgaccaaggaatttgtgaggaattttatgt 499  Q
    ||||| ||||||||||||||||| ||||| |||||||||||| ||| ||||| || |||||||||||||| ||||||||||||||||||||||||||| |    
T  10886 caaaaattagtgagggaaatttactgaggaaaaacatgaaattcctctctaattctgtcactaaattttgtgaccaaggaatttgtgaggaattttatat 10985  T
Q  500 tttctgtcacnaattnccctccctaattttgcntttcc 537  Q
    |||  ||||| |||| || ||||||||||||| |||||    
T  10986 ttttcgtcacaaatttccttccctaattttgcttttcc 11023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007 (Bit Score: 82; Significance: 2e-38; HSPs: 3)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 410 - 535
Target Start/End: Original strand, 3746 - 3871
Alignment:
Q  410 tgagggaaatttagtgagggaaaacatgaaatccctttctaantccgtcactaaattttgcgaccaaggaatttgtgaggaattttatgttttctgtcac 509  Q
    ||||||||||||||||||||||||| | |||||||| ||||| |||||||||||||||||||||||||||||||||||||||||| || ||||| |||||    
T  3746 tgagggaaatttagtgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaaggaatttgtgaggaatttcattttttccgtcac 3845  T
Q  510 naattnccctccctaattttgcnttt 535  Q
     ||||  |||| |||||||||| |||    
T  3846 taattttcctcgctaattttgctttt 3871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007; HSP #2
Raw Score: 76; E-Value: 7e-35
Query Start/End: Original strand, 401 - 529
Target Start/End: Original strand, 202769 - 202897
Alignment:
Q  401 aaaagttagtgagggaaatttagtgagggaaaacatgaaatccctttctaantccgtcactaaattttgcgaccaaggaatttgtgaggaattttatgtt 500  Q
    |||| ||||||||| ||||||||||||||||||| | |||| ||| ||||| |||||||||||||||||||||||||||||||||||| ||||| || ||    
T  202769 aaaaattagtgaggaaaatttagtgagggaaaacgtaaaattcctctctaattccgtcactaaattttgcgaccaaggaatttgtgagcaatttcatttt 202868  T
Q  501 ttctgtcacnaattnccctccctaatttt 529  Q
    ||| ||||| |||| ||||| ||||||||    
T  202869 ttccgtcactaatttccctcgctaatttt 202897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007; HSP #3
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 400 - 472
Target Start/End: Complemental strand, 276279 - 276207
Alignment:
Q  400 caaaagttagtgagggaaatttagtgagggaaaacatgaaatccctttctaantccgtcactaaattttgcga 472  Q
    ||||| |||||||||||||||| ||||| |||||| |||||||||| ||||| ||||||||||||||||||||    
T  276279 caaaaattagtgagggaaattttgtgagagaaaacgtgaaatccctctctaattccgtcactaaattttgcga 276207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0087 (Bit Score: 78; Significance: 4e-36; HSPs: 1)
Name: scaffold0087
Description:

Target: scaffold0087; HSP #1
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 400 - 518
Target Start/End: Complemental strand, 37932 - 37814
Alignment:
Q  400 caaaagttagtgagggaaatttagtgagggaaaacatgaaatccctttctaantccgtcactaaattttgcgaccaaggaatttgtgaggaattttatgt 499  Q
    ||||| |||||||||||||||| ||||||||||||||||||||||| ||||| |||||||||||||||||||||||   ||||||||||||||||||| |    
T  37932 caaaaattagtgagggaaattttgtgagggaaaacatgaaatccctctctaattccgtcactaaattttgcgaccataaaatttgtgaggaattttattt 37833  T
Q  500 tttctgtcacnaattnccc 518  Q
    |||| ||||| |||| |||    
T  37832 tttccgtcactaatttccc 37814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0076 (Bit Score: 78; Significance: 4e-36; HSPs: 1)
Name: scaffold0076
Description:

Target: scaffold0076; HSP #1
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 406 - 535
Target Start/End: Original strand, 26483 - 26612
Alignment:
Q  406 ttagtgagggaaatttagtgagggaaaacatgaaatccctttctaantccgtcactaaattttgcgaccaaggaatttgtgaggaattttatgttttctg 505  Q
    ||||||||||| ||||||||||||||||| | |||||||| ||||| |||||||||||||||||||||||| ||||||||||||||||| || ||||| |    
T  26483 ttagtgagggacatttagtgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgaggaatttcattttttccg 26582  T
Q  506 tcacnaattnccctccctaattttgcnttt 535  Q
    |||| |||| || || |||||||||| |||    
T  26583 tcactaatttccgtcactaattttgctttt 26612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006 (Bit Score: 76; Significance: 7e-35; HSPs: 2)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 76; E-Value: 7e-35
Query Start/End: Original strand, 420 - 535
Target Start/End: Complemental strand, 84799 - 84684
Alignment:
Q  420 ttagtgagggaaaacatgaaatccctttctaantccgtcactaaattttgcgaccaaggaatttgtgaggaattttatgttttctgtcacnaattnccct 519  Q
    ||||||||||||||| | |||||||| ||||| ||| |||||||||||||||||||||||||||||||||||||| || ||||||||||| |||| ||||    
T  84799 ttagtgagggaaaacgtaaaatccctctctaattccatcactaaattttgcgaccaaggaatttgtgaggaatttcattttttctgtcactaatttccct 84700  T
Q  520 ccctaattttgcnttt 535  Q
    | |||||||||| |||    
T  84699 cactaattttgctttt 84684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006; HSP #2
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 408 - 529
Target Start/End: Complemental strand, 121124 - 121003
Alignment:
Q  408 agtgagggaaatttagtgagggaaaacatgaaatccctttctaantccgtcactaaattttgcgaccaaggaatttgtgaggaattttatgttttctgtc 507  Q
    |||||||||| ||||| |||||||||| |||||||||| ||||| ||||||||||||||||||||||||| |||||||||| |||||||| ||||   |     
T  121124 agtgagggaattttagagagggaaaacgtgaaatccctctctaattccgtcactaaattttgcgaccaagaaatttgtgagaaattttatttttttcata 121025  T
Q  508 acnaattnccctccctaatttt 529  Q
    || |||| ||||| ||||||||    
T  121024 actaatttccctctctaatttt 121003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0240 (Bit Score: 72; Significance: 2e-32; HSPs: 1)
Name: scaffold0240
Description:

Target: scaffold0240; HSP #1
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 416 - 535
Target Start/End: Complemental strand, 15119 - 15000
Alignment:
Q  416 aaatttagtgagggaaaacatgaaatccctttctaantccgtcactaaattttgcgaccaaggaatttgtgaggaattttatgttttctgtcacnaattn 515  Q
    ||||||||||||||||||| | |||||||| ||||| ||||||||||||||||||||||||| ||||| |||||||||| || ||||| ||||| ||||     
T  15119 aaatttagtgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaagaaatttatgaggaatttcattttttcggtcactaattt 15020  T
Q  516 ccctccctaattttgcnttt 535  Q
    ||||| |||||||||| |||    
T  15019 ccctcgctaattttgctttt 15000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0128 (Bit Score: 72; Significance: 2e-32; HSPs: 1)
Name: scaffold0128
Description:

Target: scaffold0128; HSP #1
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 416 - 535
Target Start/End: Complemental strand, 10792 - 10673
Alignment:
Q  416 aaatttagtgagggaaaacatgaaatccctttctaantccgtcactaaattttgcgaccaaggaatttgtgaggaattttatgttttctgtcacnaattn 515  Q
    ||||||||||||||||||| | |||| ||| ||||| ||||||||||||||||||||| |||||||||||||||||||| || ||||| ||||| ||||     
T  10792 aaatttagtgagggaaaacgtaaaattcctctctaattccgtcactaaattttgcgactaaggaatttgtgaggaatttcattttttccgtcactaattt 10693  T
Q  516 ccctccctaattttgcnttt 535  Q
    ||||| |||||||||| |||    
T  10692 ccctcgctaattttgctttt 10673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0108 (Bit Score: 72; Significance: 2e-32; HSPs: 1)
Name: scaffold0108
Description:

Target: scaffold0108; HSP #1
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 400 - 535
Target Start/End: Original strand, 12647 - 12781
Alignment:
Q  400 caaaagttagtgagggaaatttagtgagggaaaacatgaaatccctttctaantccgtcactaaattttgcgaccaaggaatttgtgaggaattttatgt 499  Q
    ||||| |||||||||||||||| |||||||||||| |||| ||||| ||||| |||||||||||||||||||||||  |||||| |||||||||| || |    
T  12647 caaaaattagtgagggaaattttgtgagggaaaacgtgaa-tccctctctaattccgtcactaaattttgcgaccatagaatttatgaggaatttcattt 12745  T
Q  500 tttctgtcacnaattnccctccctaattttgcnttt 535  Q
    |||| ||||| |||| ||||| |||||||||| |||    
T  12746 tttccgtcactaatttccctcgctaattttgctttt 12781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0014 (Bit Score: 72; Significance: 2e-32; HSPs: 1)
Name: scaffold0014
Description:

Target: scaffold0014; HSP #1
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 416 - 535
Target Start/End: Original strand, 22221 - 22340
Alignment:
Q  416 aaatttagtgagggaaaacatgaaatccctttctaantccgtcactaaattttgcgaccaaggaatttgtgaggaattttatgttttctgtcacnaattn 515  Q
    ||||||||||||||||||| | |||||||| ||||| ||||||||||||||||||||| |||||||||||||||||||| || ||||  ||||| ||||     
T  22221 aaatttagtgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgactaaggaatttgtgaggaatttcatttttttcgtcactaattt 22320  T
Q  516 ccctccctaattttgcnttt 535  Q
    ||||| |||||||||| |||    
T  22321 ccctcgctaattttgctttt 22340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009 (Bit Score: 68; Significance: 4e-30; HSPs: 3)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 400 - 535
Target Start/End: Original strand, 219630 - 219765
Alignment:
Q  400 caaaagttagtgagggaaatttagtgagggaaaacatgaaatccctttctaantccgtcactaaattttgcgaccaaggaatttgtgaggaattttatgt 499  Q
    ||||| |||||||| || |||||||||||||||||||||||||||| ||||| ||||| ||||||||||||||  ||  |||||||||||||||| || |    
T  219630 caaaaattagtgagagatatttagtgagggaaaacatgaaatccctctctaattccgttactaaattttgcgattaaaaaatttgtgaggaatttcattt 219729  T
Q  500 tttctgtcacnaattnccctccctaattttgcnttt 535  Q
    |||| ||||| |||| || || |||||||||| |||    
T  219730 tttccgtcactaatttccgtcgctaattttgctttt 219765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009; HSP #2
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 420 - 529
Target Start/End: Original strand, 182544 - 182653
Alignment:
Q  420 ttagtgagggaaaacatgaaatccctttctaantccgtcactaaattttgcgaccaaggaatttgtgaggaattttatgttttctgtcacnaattnccct 519  Q
    |||||||||||||   | |||||||| ||||| |||||||||||||||||||||||||||||||||||| ||||| || ||||| ||||| |||| ||||    
T  182544 ttagtgagggaaattgtaaaatccctctctaattccgtcactaaattttgcgaccaaggaatttgtgagaaatttcattttttccgtcactaatttccct 182643  T
Q  520 ccctaatttt 529  Q
    | ||||||||    
T  182644 cgctaatttt 182653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009; HSP #3
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 420 - 535
Target Start/End: Complemental strand, 215781 - 215673
Alignment:
Q  420 ttagtgagggaaaacatgaaatccctttctaantccgtcactaaattttgcgaccaaggaatttgtgaggaattttatgttttctgtcacnaattnccct 519  Q
    ||||||||||||||| | |||||||| ||||| |||||        ||||||||||||||||||||||||||||| || ||||| ||| | |||| | ||    
T  215781 ttagtgagggaaaacgtaaaatccctctctaattccgta-------tttgcgaccaaggaatttgtgaggaatttcattttttccgtcgctaatttctct 215689  T
Q  520 ccctaattttgcnttt 535  Q
    | |||||||||| |||    
T  215688 cgctaattttgctttt 215673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0655 (Bit Score: 66; Significance: 6e-29; HSPs: 1)
Name: scaffold0655
Description:

Target: scaffold0655; HSP #1
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 400 - 529
Target Start/End: Complemental strand, 3305 - 3178
Alignment:
Q  400 caaaagttagtgagggaaatttagtgagggaaaacatgaaatccctttctaantccgtcactaaattttgcgaccaaggaatttgtgaggaattttatgt 499  Q
    ||||| || |||||||||||||||  ||||||||| ||||||||||  |||| || |||||||||||||||||||| | ||||||||||||| ||||| |    
T  3305 caaaaatttgtgagggaaatttag--agggaaaacgtgaaatccctcactaattctgtcactaaattttgcgaccatgaaatttgtgaggaactttatct 3208  T
Q  500 tttctgtcacnaattnccctccctaatttt 529  Q
    |||| ||||| |||| ||||||||||||||    
T  3207 tttccgtcactaatttccctccctaatttt 3178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0161 (Bit Score: 64; Significance: 1e-27; HSPs: 1)
Name: scaffold0161
Description:

Target: scaffold0161; HSP #1
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 400 - 535
Target Start/End: Original strand, 6789 - 6924
Alignment:
Q  400 caaaagttagtgagggaaatttagtgagggaaaacatgaaatccctttctaantccgtcactaaattttgcgaccaaggaatttgtgaggaattttatgt 499  Q
    ||||| ||||| |||||||||||||||||||||||||||||| ||| ||||| ||||||| |||||||||| || ||| |||||| || |||||| || |    
T  6789 caaaaattagtaagggaaatttagtgagggaaaacatgaaattcctctctaattccgtcattaaattttgcaacgaagaaatttgcgaagaatttcattt 6888  T
Q  500 tttctgtcacnaattnccctccctaattttgcnttt 535  Q
    |||| ||||  |||| ||||| |||||||||| |||    
T  6889 tttccgtcaataatttccctcgctaattttgctttt 6924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023 (Bit Score: 64; Significance: 1e-27; HSPs: 1)
Name: scaffold0023
Description:

Target: scaffold0023; HSP #1
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 400 - 535
Target Start/End: Complemental strand, 39848 - 39713
Alignment:
Q  400 caaaagttagtgagggaaatttagtgagggaaaacatgaaatccctttctaantccgtcactaaattttgcgaccaaggaatttgtgaggaattttatgt 499  Q
    ||||| ||||||||||||||||  ||||||||||| ||||||| || ||||| |||||||||||||||||| |||| | |||||| ||||||||| || |    
T  39848 caaaaattagtgagggaaattttatgagggaaaacgtgaaatctctctctaattccgtcactaaattttgcaaccatgaaatttgggaggaatttcattt 39749  T
Q  500 tttctgtcacnaattnccctccctaattttgcnttt 535  Q
    ||||  |||| |||| ||||| |||||||||| |||    
T  39748 tttccatcactaatttccctcgctaattttgctttt 39713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0035 (Bit Score: 61; Significance: 6e-26; HSPs: 1)
Name: scaffold0035
Description:

Target: scaffold0035; HSP #1
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 400 - 535
Target Start/End: Complemental strand, 74863 - 74727
Alignment:
Q  400 caaaagttagtgagggaaatttagtgagggaaaa-catgaaatccctttctaantccgtcactaaattttgcgaccaaggaatttgtgaggaattttatg 498  Q
    ||||| ||||||| ||| |||||||||||||||| |||||||||||| ||||| || ||||||||||||| ||||||  ||||||||||| ||||| ||     
T  74863 caaaaattagtgaaggatatttagtgagggaaaaacatgaaatccctctctaattctgtcactaaattttacgaccagagaatttgtgagaaatttcatt 74764  T
Q  499 ttttctgtcacnaattnccctccctaattttgcnttt 535  Q
    ||||| ||||| |||| ||||  |||||||||| |||    
T  74763 ttttccgtcactaatttcccttgctaattttgccttt 74727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0184 (Bit Score: 60; Significance: 2e-25; HSPs: 1)
Name: scaffold0184
Description:

Target: scaffold0184; HSP #1
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 401 - 514
Target Start/End: Original strand, 7451 - 7564
Alignment:
Q  401 aaaagttagtgagggaaatttagtgagggaaaacatgaaatccctttctaantccgtcactaaattttgcgaccaaggaatttgtgaggaattttatgtt 500  Q
    |||| ||| ||||||||||||||||||||||||| |||||||||| ||||| || ||||||||| |||||||| ||||| ||||||| |||||| || ||    
T  7451 aaaaattaatgagggaaatttagtgagggaaaacgtgaaatccctctctaattctgtcactaaactttgcgactaaggattttgtgaagaatttcatttt 7550  T
Q  501 ttctgtcacnaatt 514  Q
    ||| ||||| ||||    
T  7551 ttccgtcactaatt 7564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0062 (Bit Score: 59; Significance: 9e-25; HSPs: 1)
Name: scaffold0062
Description:

Target: scaffold0062; HSP #1
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 406 - 529
Target Start/End: Original strand, 43917 - 44040
Alignment:
Q  406 ttagtgagggaaatttagtgagggaaaacatgaaatccctttctaantccgtcactaaattttgcgaccaaggaatttgtgaggaattttatgttttctg 505  Q
    ||||||||| ||||||||||||||||||| | |||| | | ||||| ||||| | |||||||||||||||| ||||||||||||||||| || |||||      
T  43917 ttagtgaggaaaatttagtgagggaaaacgtaaaattcttctctaattccgttattaaattttgcgaccaaagaatttgtgaggaatttcattttttcca 44016  T
Q  506 tcacnaattnccctccctaatttt 529  Q
    |||| |||| ||||| ||||||||    
T  44017 tcactaatttccctcgctaatttt 44040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0019 (Bit Score: 54; Significance: 9e-22; HSPs: 1)
Name: scaffold0019
Description:

Target: scaffold0019; HSP #1
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 401 - 535
Target Start/End: Original strand, 173439 - 173574
Alignment:
Q  401 aaaagttagtgagggaaatttagtgagggaaaacatgaaatccctttctaantccgtcactaaattttgcgaccaaggaa--tttgtgaggaattttatg 498  Q
    |||| ||||||| ||| ||||||||||||||||||| ||||| || ||||| |||||||||||||||||||||||| |||  ||| |||| ||||| ||     
T  173439 aaaaattagtgatggatatttagtgagggaaaacataaaatcactctctaattccgtcactaaattttgcgaccaaagaatttttatgagaaatttcatt 173538  T
Q  499 ttttctgtcacnaattnccctccctaattttgcnttt 535  Q
    ||||| ||||| ||||  |||| |||||||||| |||    
T  173539 ttttccgtcactaattt-cctcgctaattttgctttt 173574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002 (Bit Score: 52; Significance: 1e-20; HSPs: 1)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 420 - 513
Target Start/End: Original strand, 439977 - 440070
Alignment:
Q  420 ttagtgagggaaaacatgaaatccctttctaantccgtcactaaattttgcgaccaaggaatttgtgaggaattttatgttttctgtcacnaat 513  Q
    ||||||||||||||  | |||||||| ||||| |||||||||||||||||||| |||| |||||||||||||||| || ||||| ||||| |||    
T  439977 ttagtgagggaaaatgtaaaatccctctctaattccgtcactaaattttgcgatcaagaaatttgtgaggaatttcattttttccgtcactaat 440070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0284 (Bit Score: 49; Significance: 9e-19; HSPs: 1)
Name: scaffold0284
Description:

Target: scaffold0284; HSP #1
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 420 - 514
Target Start/End: Complemental strand, 1644 - 1550
Alignment:
Q  420 ttagtgagggaaaacatgaaatccctttctaantccgtcactaaattttgcgaccaaggaatttgtgaggaattttatgttttctgtcacnaatt 514  Q
    ||||||||||| ||||||||| |||| ||||| |  || ||||||||||||||||||||||||| ||||| ||||||| ||||| ||||| ||||    
T  1644 ttagtgagggataacatgaaacccctctctaattatgttactaaattttgcgaccaaggaatttatgagggattttattttttccgtcactaatt 1550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011 (Bit Score: 48; Significance: 3e-18; HSPs: 1)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 457 - 530
Target Start/End: Complemental strand, 17705 - 17632
Alignment:
Q  457 tcactaaattttgcgaccaaggaatttgtgaggaattttatgttttctgtcacnaattnccctccctaattttg 530  Q
    |||||||| ||||||||||||||||||||||||||||| || ||||| ||||| |||| ||||| |||||||||    
T  17705 tcactaaagtttgcgaccaaggaatttgtgaggaatttcattttttccgtcactaatttccctcgctaattttg 17632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0114 (Bit Score: 41; Significance: 0.00000000000005; HSPs: 1)
Name: scaffold0114
Description:

Target: scaffold0114; HSP #1
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 420 - 514
Target Start/End: Original strand, 36316 - 36410
Alignment:
Q  420 ttagtgagggaaaacatgaaatccctttctaantccgtcactaaattttgcgaccaaggaatttgtgaggaattttatgttttctgtcacnaatt 514  Q
    ||||||||||| ||||||||||| || ||||| |  || ||||||||||| ||||||||||||| ||| | ||||||| ||||| ||||| ||||    
T  36316 ttagtgagggataacatgaaatctctctctaattatgttactaaattttgtgaccaaggaatttatgatggattttattttttccgtcactaatt 36410  T

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Target: scaffold0211 (Bit Score: 34; Significance: 0.0000000008; HSPs: 1)
Name: scaffold0211
Description:

Target: scaffold0211; HSP #1
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 420 - 508
Target Start/End: Complemental strand, 19263 - 19175
Alignment:
Q  420 ttagtgagggaaaacatgaaatccctttctaantccgtcactaaattttgcgaccaaggaatttgtgaggaattttatgttttctgtca 508  Q
    ||||||||||| |||||||||||||| ||||| |  ||  |||||||||||||||||| || || ||||  ||||||| ||||| ||||    
T  19263 ttagtgagggataacatgaaatccctctctaattatgtttctaaattttgcgaccaagaaaattatgagagattttattttttccgtca 19175  T

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