View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: 11737_low_2 (Length: 499)
Name: 11737_low_2
Description: 11737
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] 11737_low_2 |
 | |
|
| [»] scaffold0074 (1 HSPs) |
| | |
|
Alignment Details
Target: chr5 (Bit Score: 462; Significance: 0; HSPs: 3)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 462; E-Value: 0
Query Start/End: Original strand, 16 - 493
Target Start/End: Complemental strand, 41722672 - 41722195
Alignment:
| Q |
16 |
atgatattgaacacctatgtgtttcgtccttgaatgaaaagctggattccttgcaatgtgcaaggcactctgactgtcacaatacacagtaatttgttct |
115 |
Q |
| |
|
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
41722672 |
atgatattgaacgcctatgtgtttcgtccttgaatgaaaagctggattccttgcaatatgcaaggcactctgactgtcacaatacacagtaatttgttcc |
41722573 |
T |
|
| Q |
116 |
tgcttgtgcccgagttcctccattaacctttgcatccaaatagcttccttgcatgcttgagtagctgccatgtactccgcttctgtcgttgacagagcta |
215 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
41722572 |
tgcttgtgcccgagttcctccattaacctttgcatccaaatagcttccttgcatgcttgagtagctgccatgtactccgcttctgtcgttgacagagcta |
41722473 |
T |
|
| Q |
216 |
caaccgtttgtaacttggacaaccaacttactgctcctcctgcaagcgtgaacacataaccagtagtagattttcttttatcatgatcacctgcaaaatc |
315 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
41722472 |
caaccgtttgtaacttggacaaccaacttactgctcctcctgcaagcgtgaacacataaccagtagtagattttcttttatcatgatcacctgcaaaatc |
41722373 |
T |
|
| Q |
316 |
tgaatcaacataaccccagacagttaactctgatcctccgaaacataccgcaacacctgaggttcctttaatgtacctcatgattctcttaacagcattc |
415 |
Q |
| |
|
||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
41722372 |
tgaatcaacataacccctgacagttaactctgatcctccgaaacataccgcaacacctgaggttcctttaatgtacctcatgattctcttaacagcattc |
41722273 |
T |
|
| Q |
416 |
caatgctctttacccggatccgccataaaccgactaaccactcccactgcttgtgcaatgtctggtcttgtacatatc |
493 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
41722272 |
caatgctctttacccggatccgccataaaccgactaaccactcccactgcttgtgcaatgtctggtcttgtacatatc |
41722195 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #2
Raw Score: 374; E-Value: 0
Query Start/End: Original strand, 88 - 493
Target Start/End: Complemental strand, 34356200 - 34355795
Alignment:
| Q |
88 |
actgtcacaatacacagtaatttgttcttgcttgtgcccgagttcctccattaacctttgcatccaaatagcttccttgcatgcttgagtagctgccatg |
187 |
Q |
| |
|
||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| |
|
|
| T |
34356200 |
actgtcacaatacacagtaattttctcttgcttgtgcccgagttcctccattaacctttgcatccaaatagcttccttgcatgcttgggtagctgccatg |
34356101 |
T |
|
| Q |
188 |
tactccgcttctgtcgttgacagagctacaaccgtttgtaacttggacaaccaacttactgctcctcctgcaagcgtgaacacataaccagtagtagatt |
287 |
Q |
| |
|
||||| |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
34356100 |
tactcagcttctgtcgttgacagagctacaacagtttgtaacttggacaaccaacttactgctcctcctgcaagcgtgaacacataaccagtagtagatt |
34356001 |
T |
|
| Q |
288 |
ttcttttatcatgatcacctgcaaaatctgaatcaacataaccccagacagttaactctgatcctccgaaacataccgcaacacctgaggttcctttaat |
387 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| ||||||||| ||||||||||||| |
|
|
| T |
34356000 |
ttcttttatcatgatcacctgcaaaatctgaatcaacataacccctgacagttaactctgatcctccgaaacatactgcaacacctaaggttcctttaat |
34355901 |
T |
|
| Q |
388 |
gtacctcatgattctcttaacagcattccaatgctctttacccggatccgccataaaccgactaaccactcccactgcttgtgcaatgtctggtcttgta |
487 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
34355900 |
gtacctcatgattctcttaacagcattccaatgctctttacccggatccgccataaaccgactaaccactcccactgcttgtgcaatgtctggtcttgta |
34355801 |
T |
|
| Q |
488 |
catatc |
493 |
Q |
| |
|
|||||| |
|
|
| T |
34355800 |
catatc |
34355795 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #3
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 7 - 92
Target Start/End: Complemental strand, 34359460 - 34359375
Alignment:
| Q |
7 |
tcgaagaatatgatattgaacacctatgtgtttcgtccttgaatgaaaagctggattccttgcaatgtgcaaggcactctgactgt |
92 |
Q |
| |
|
||||| || |||||||||||| || ||||| |||||||||||||||||||||||||||||||||||||| |||||||||||||||| |
|
|
| T |
34359460 |
tcgaacaaaatgatattgaacgccaatgtgcttcgtccttgaatgaaaagctggattccttgcaatgtgtaaggcactctgactgt |
34359375 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4 (Bit Score: 462; Significance: 0; HSPs: 4)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 462; E-Value: 0
Query Start/End: Original strand, 16 - 493
Target Start/End: Original strand, 30946238 - 30946715
Alignment:
| Q |
16 |
atgatattgaacacctatgtgtttcgtccttgaatgaaaagctggattccttgcaatgtgcaaggcactctgactgtcacaatacacagtaatttgttct |
115 |
Q |
| |
|
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
30946238 |
atgatattgaacgcctatgtgtttcgtccttgaatgaaaagctggattccttgcaatgtgcaaggcactctgactgtcacaatacacagtaatttgttcc |
30946337 |
T |
|
| Q |
116 |
tgcttgtgcccgagttcctccattaacctttgcatccaaatagcttccttgcatgcttgagtagctgccatgtactccgcttctgtcgttgacagagcta |
215 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
30946338 |
tgcttgtgcccgagttcctccattaacctttgcatccaaatagcttccttgcatgcttgagtagctgccatgtactccgcttctgtcgttgacagagcta |
30946437 |
T |
|
| Q |
216 |
caaccgtttgtaacttggacaaccaacttactgctcctcctgcaagcgtgaacacataaccagtagtagattttcttttatcatgatcacctgcaaaatc |
315 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
30946438 |
caaccgtttgtaacttggacaaccaacttactgctcctcctgtaagcgtgaacacataaccagtagtagattttcttttatcatgatcacctgcaaaatc |
30946537 |
T |
|
| Q |
316 |
tgaatcaacataaccccagacagttaactctgatcctccgaaacataccgcaacacctgaggttcctttaatgtacctcatgattctcttaacagcattc |
415 |
Q |
| |
|
||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
30946538 |
tgaatcaacataacccctgacagttaactctgatcctccgaaacataccgcaacacctgaggttcctttaatgtacctcatgattctcttaacagcattc |
30946637 |
T |
|
| Q |
416 |
caatgctctttacccggatccgccataaaccgactaaccactcccactgcttgtgcaatgtctggtcttgtacatatc |
493 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
30946638 |
caatgctctttacccggatccgccataaaccgactaaccactcccactgcttgtgcaatgtctggtcttgtacatatc |
30946715 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #2
Raw Score: 462; E-Value: 0
Query Start/End: Original strand, 16 - 493
Target Start/End: Complemental strand, 42270165 - 42269688
Alignment:
| Q |
16 |
atgatattgaacacctatgtgtttcgtccttgaatgaaaagctggattccttgcaatgtgcaaggcactctgactgtcacaatacacagtaatttgttct |
115 |
Q |
| |
|
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
42270165 |
atgatattgaacgcctatgtgtttcgtccttgaatgaaaagctggattccttgcaatatgcaaggcactctgactgtcacaatacacagtaatttgttcc |
42270066 |
T |
|
| Q |
116 |
tgcttgtgcccgagttcctccattaacctttgcatccaaatagcttccttgcatgcttgagtagctgccatgtactccgcttctgtcgttgacagagcta |
215 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
42270065 |
tgcttgtgcccgagttcctccattaacctttgcatccaaatagcttccttgcatgcttgagtagctgccatgtactccgcttctgtcgttgacagagcta |
42269966 |
T |
|
| Q |
216 |
caaccgtttgtaacttggacaaccaacttactgctcctcctgcaagcgtgaacacataaccagtagtagattttcttttatcatgatcacctgcaaaatc |
315 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
42269965 |
caaccgtttgtaacttggacaaccaacttactgctcctcctgcaagcgtgaacacataaccagtagtagattttcttttatcatgatcacctgcaaaatc |
42269866 |
T |
|
| Q |
316 |
tgaatcaacataaccccagacagttaactctgatcctccgaaacataccgcaacacctgaggttcctttaatgtacctcatgattctcttaacagcattc |
415 |
Q |
| |
|
||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
42269865 |
tgaatcaacataacccctgacagttaactctgatcctccgaaacataccgcaacacctgaggttcctttaatgtacctcatgattctcttaacagcattc |
42269766 |
T |
|
| Q |
416 |
caatgctctttacccggatccgccataaaccgactaaccactcccactgcttgtgcaatgtctggtcttgtacatatc |
493 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
42269765 |
caatgctctttacccggatccgccataaaccgactaaccactcccactgcttgtgcaatgtctggtcttgtacatatc |
42269688 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #3
Raw Score: 462; E-Value: 0
Query Start/End: Original strand, 16 - 493
Target Start/End: Original strand, 48697876 - 48698353
Alignment:
| Q |
16 |
atgatattgaacacctatgtgtttcgtccttgaatgaaaagctggattccttgcaatgtgcaaggcactctgactgtcacaatacacagtaatttgttct |
115 |
Q |
| |
|
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
48697876 |
atgatattgaacgcctatgtgtttcgtccttgaatgaaaagctggattccttgcaatatgcaaggcactctgactgtcacaatacacagtaatttgttcc |
48697975 |
T |
|
| Q |
116 |
tgcttgtgcccgagttcctccattaacctttgcatccaaatagcttccttgcatgcttgagtagctgccatgtactccgcttctgtcgttgacagagcta |
215 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
48697976 |
tgcttgtgcccgagttcctccattaacctttgcatccaaatagcttccttgcatgcttgagtagctgccatgtactccgcttctgtcgttgacagagcta |
48698075 |
T |
|
| Q |
216 |
caaccgtttgtaacttggacaaccaacttactgctcctcctgcaagcgtgaacacataaccagtagtagattttcttttatcatgatcacctgcaaaatc |
315 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
48698076 |
caaccgtttgtaacttggacaaccaacttactgctcctcctgcaagcgtgaacacataaccagtagtagattttcttttatcatgatcacctgcaaaatc |
48698175 |
T |
|
| Q |
316 |
tgaatcaacataaccccagacagttaactctgatcctccgaaacataccgcaacacctgaggttcctttaatgtacctcatgattctcttaacagcattc |
415 |
Q |
| |
|
||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
48698176 |
tgaatcaacataacccctgacagttaactctgatcctccgaaacataccgcaacacctgaggttcctttaatgtacctcatgattctcttaacagcattc |
48698275 |
T |
|
| Q |
416 |
caatgctctttacccggatccgccataaaccgactaaccactcccactgcttgtgcaatgtctggtcttgtacatatc |
493 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
48698276 |
caatgctctttacccggatccgccataaaccgactaaccactcccactgcttgtgcaatgtctggtcttgtacatatc |
48698353 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #4
Raw Score: 243; E-Value: 1e-134
Query Start/End: Original strand, 7 - 493
Target Start/End: Complemental strand, 2003154 - 2002668
Alignment:
| Q |
7 |
tcgaagaatatgatattgaacacctatgtgtttcgtccttgaatgaaaagctggattccttgcaatgtgcaaggcactctgactgtcacaatacacagta |
106 |
Q |
| |
|
||||| || ||| ||||||||| |||||||||| || || |||||||| ||||||||||||||| ||||| ||||||| |||||||||||||||| | |
|
|
| T |
2003154 |
tcgaacaaaatggtattgaacatctatgtgttttgttctcgaatgaaagaatggattccttgcaatatgcaatgcactctaactgtcacaatacacaaca |
2003055 |
T |
|
| Q |
107 |
atttgttcttgcttgtgcccgagttcctccattaacctttgcatccaaatagcttccttgcatgcttgagtagctgccatgtactccgcttctgtcgttg |
206 |
Q |
| |
|
||||||| ||| ||||||||||||| ||||||| ||||| |||||||||||||||||||| ||||| |||||||||| || || |||||||| || | |
|
|
| T |
2003054 |
atttgttgttgactgtgcccgagttcttccattagtctttgtatccaaatagcttccttgcaagcttgcatagctgccatatattcagcttctgtagtag |
2002955 |
T |
|
| Q |
207 |
acagagctacaaccgtttgtaacttggacaaccaacttactgctcctcctgcaagcgtgaacacataaccagtagtagattttcttttatcatgatcacc |
306 |
Q |
| |
|
| |||||||| || | |||||| || ||||||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||||||| ||||||| |
|
|
| T |
2002954 |
atagagctacgacagattgtaattttgacaaccaacttactgctcctcctgcaagtgtgaacacataaccagtagtagatcttcttttatcaagatcacc |
2002855 |
T |
|
| Q |
307 |
tgcaaaatctgaatcaacataaccccagacagttaactctgatcctccgaaacataccgcaacacctgaggttcctttaatgtacctcatgattctctta |
406 |
Q |
| |
|
|||||||||||||||||||||||| |||| | || || |||||| |||||||| |||||| || |||||||||| || || |||| |||||||||| |
|
|
| T |
2002854 |
tgcaaaatctgaatcaacataacctttgacaataaattccaatcctctgaaacataatgcaacatctaaggttccttttatatatctcaggattctctta |
2002755 |
T |
|
| Q |
407 |
acagcattccaatgctctttacccggatccgccataaaccgactaaccactcccactgcttgtgcaatgtctggtcttgtacatatc |
493 |
Q |
| |
|
||||||| ||||||||||||||| |||||||||||||| ||||||||| ||||||||||||||||||||||||| |||||||||||| |
|
|
| T |
2002754 |
acagcatcccaatgctctttaccaggatccgccataaatcgactaaccgctcccactgcttgtgcaatgtctggccttgtacatatc |
2002668 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8 (Bit Score: 458; Significance: 0; HSPs: 2)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 458; E-Value: 0
Query Start/End: Original strand, 16 - 493
Target Start/End: Original strand, 9440146 - 9440623
Alignment:
| Q |
16 |
atgatattgaacacctatgtgtttcgtccttgaatgaaaagctggattccttgcaatgtgcaaggcactctgactgtcacaatacacagtaatttgttct |
115 |
Q |
| |
|
||||||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
9440146 |
atgatattgaatgcctatgtgtttcgtccttgaatgaaaagctggattccttgcaatatgcaaggcactctgactgtcacaatacacagtaatttgttcc |
9440245 |
T |
|
| Q |
116 |
tgcttgtgcccgagttcctccattaacctttgcatccaaatagcttccttgcatgcttgagtagctgccatgtactccgcttctgtcgttgacagagcta |
215 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
9440246 |
tgcttgtgcccgagttcctccattaacctttgcatccaaatagcttccttgcatgcttgagtagctgccatgtactccgcttctgtcgttgacagagcta |
9440345 |
T |
|
| Q |
216 |
caaccgtttgtaacttggacaaccaacttactgctcctcctgcaagcgtgaacacataaccagtagtagattttcttttatcatgatcacctgcaaaatc |
315 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
9440346 |
caaccgtttgtaacttggacaaccaacttactgctcctcctgcaagcgtgaacacataaccagtagtagattttcttttatcatgatcacctgcaaaatc |
9440445 |
T |
|
| Q |
316 |
tgaatcaacataaccccagacagttaactctgatcctccgaaacataccgcaacacctgaggttcctttaatgtacctcatgattctcttaacagcattc |
415 |
Q |
| |
|
||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
9440446 |
tgaatcaacataacccctgacagttaactctgatcctccgaaacataccgcaacacctgaggttcctttaatgtacctcatgattctcttaacagcattc |
9440545 |
T |
|
| Q |
416 |
caatgctctttacccggatccgccataaaccgactaaccactcccactgcttgtgcaatgtctggtcttgtacatatc |
493 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
9440546 |
caatgctctttacccggatccgccataaaccgactaaccactcccactgcttgtgcaatgtctggtcttgtacatatc |
9440623 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #2
Raw Score: 231; E-Value: 1e-127
Query Start/End: Original strand, 7 - 493
Target Start/End: Original strand, 24594537 - 24595023
Alignment:
| Q |
7 |
tcgaagaatatgatattgaacacctatgtgtttcgtccttgaatgaaaagctggattccttgcaatgtgcaaggcactctgactgtcacaatacacagta |
106 |
Q |
| |
|
||||| || ||| |||||||||||||||||||| || || |||||||| |||||||||||||||||||||| |||||||||||||||||||||||| | |
|
|
| T |
24594537 |
tcgaacaaaatggtattgaacacctatgtgttttgttctcgaatgaaagactggattccttgcaatgtgcaatgcactctgactgtcacaatacacaaca |
24594636 |
T |
|
| Q |
107 |
atttgttcttgcttgtgcccgagttcctccattaacctttgcatccaaatagcttccttgcatgcttgagtagctgccatgtactccgcttctgtcgttg |
206 |
Q |
| |
|
||||||| ||| |||| |||||||| ||||||| ||||| |||||||||||||||||||| ||||| ||||||||||| || || |||||||| || | |
|
|
| T |
24594637 |
atttgttgttgactgtggccgagttcttccattagtctttgtatccaaatagcttccttgcaagcttgtgtagctgccatatattcagcttctgtagtag |
24594736 |
T |
|
| Q |
207 |
acagagctacaaccgtttgtaacttggacaaccaacttactgctcctcctgcaagcgtgaacacataaccagtagtagattttcttttatcatgatcacc |
306 |
Q |
| |
|
| |||||||| || | |||||| || ||||| ||||||| |||||||||||||| |||||||||||||||||||||||| ||||||||||| ||||||| |
|
|
| T |
24594737 |
atagagctacgacagattgtaattttgacaatcaacttatcgctcctcctgcaagtgtgaacacataaccagtagtagatcttcttttatcaagatcacc |
24594836 |
T |
|
| Q |
307 |
tgcaaaatctgaatcaacataaccccagacagttaactctgatcctccgaaacataccgcaacacctgaggttcctttaatgtacctcatgattctctta |
406 |
Q |
| |
|
|||||||||||||||||||||||| |||| | || || |||||| |||||||| |||||| || |||||||||| || || |||| |||||||||| |
|
|
| T |
24594837 |
tgcaaaatctgaatcaacataacctttgacaataaattccaatcctctgaaacataatgcaacatctaaggttccttttatatatctcaggattctctta |
24594936 |
T |
|
| Q |
407 |
acagcattccaatgctctttacccggatccgccataaaccgactaaccactcccactgcttgtgcaatgtctggtcttgtacatatc |
493 |
Q |
| |
|
||| ||| |||||| | |||||| |||||||||||||| ||||||||| ||||||||||||||||||||||||| |||||| ||||| |
|
|
| T |
24594937 |
acaacatcccaatgttttttaccaggatccgccataaatcgactaaccgctcccactgcttgtgcaatgtctggccttgtaaatatc |
24595023 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6 (Bit Score: 458; Significance: 0; HSPs: 6)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 458; E-Value: 0
Query Start/End: Original strand, 16 - 493
Target Start/End: Original strand, 27874764 - 27875241
Alignment:
| Q |
16 |
atgatattgaacacctatgtgtttcgtccttgaatgaaaagctggattccttgcaatgtgcaaggcactctgactgtcacaatacacagtaatttgttct |
115 |
Q |
| |
|
||||||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
27874764 |
atgatattgaatgcctatgtgtttcgtccttgaatgaaaagctggattccttgcaatatgcaaggcactctgactgtcacaatacacagtaatttgttcc |
27874863 |
T |
|
| Q |
116 |
tgcttgtgcccgagttcctccattaacctttgcatccaaatagcttccttgcatgcttgagtagctgccatgtactccgcttctgtcgttgacagagcta |
215 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
27874864 |
tgcttgtgcccgagttcctccattaacctttgcatccaaatagcttccttgcatgcttgagtagctgccatgtactccgcttctgtcgttgacagagcta |
27874963 |
T |
|
| Q |
216 |
caaccgtttgtaacttggacaaccaacttactgctcctcctgcaagcgtgaacacataaccagtagtagattttcttttatcatgatcacctgcaaaatc |
315 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
27874964 |
caaccgtttgtaacttggacaaccaacttactgctcctcctgcaagcgtgaacacataaccagtagtagattttcttttatcatgatcacctgcaaaatc |
27875063 |
T |
|
| Q |
316 |
tgaatcaacataaccccagacagttaactctgatcctccgaaacataccgcaacacctgaggttcctttaatgtacctcatgattctcttaacagcattc |
415 |
Q |
| |
|
||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
27875064 |
tgaatcaacataacccctgacagttaactctgatcctccgaaacataccgcaacacctgaggttcctttaatgtacctcatgattctcttaacagcattc |
27875163 |
T |
|
| Q |
416 |
caatgctctttacccggatccgccataaaccgactaaccactcccactgcttgtgcaatgtctggtcttgtacatatc |
493 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
27875164 |
caatgctctttacccggatccgccataaaccgactaaccactcccactgcttgtgcaatgtctggtcttgtacatatc |
27875241 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #2
Raw Score: 439; E-Value: 0
Query Start/End: Original strand, 7 - 493
Target Start/End: Original strand, 26976939 - 26977425
Alignment:
| Q |
7 |
tcgaagaatatgatattgaacacctatgtgtttcgtccttgaatgaaaagctggattccttgcaatgtgcaaggcactctgactgtcacaatacacagta |
106 |
Q |
| |
|
||||| || ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
26976939 |
tcgaacaaaatgatattgaacacctatgtgcttcgtccttgaatgaaaagctggattccttgcaatgtgcaaggcactctgactgtcacaatacacagta |
26977038 |
T |
|
| Q |
107 |
atttgttcttgcttgtgcccgagttcctccattaacctttgcatccaaatagcttccttgcatgcttgagtagctgccatgtactccgcttctgtcgttg |
206 |
Q |
| |
|
|||| || |||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||| ||||||||||||||||| ||||||||||||| |
|
|
| T |
26977039 |
attttctcctgcttgtgcccgagttcctccattaacctttgcacccagatagcttccttgcatgcttgggtagctgccatgtactcagcttctgtcgttg |
26977138 |
T |
|
| Q |
207 |
acagagctacaaccgtttgtaacttggacaaccaacttactgctcctcctgcaagcgtgaacacataaccagtagtagattttcttttatcatgatcacc |
306 |
Q |
| |
|
||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
26977139 |
acagagctacaacagtttgtaacttggacaaccaacttactgctcctcctgcaagcgtgaacacataaccagtagtagattttcttttatcatgatcacc |
26977238 |
T |
|
| Q |
307 |
tgcaaaatctgaatcaacataaccccagacagttaactctgatcctccgaaacataccgcaacacctgaggttcctttaatgtacctcatgattctctta |
406 |
Q |
| |
|
|||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
26977239 |
tgcaaaatctgaatcaacataacccctgacagttaactctgatcctccgaaacataccgcaacacctgaggttcctttaatgtacctcatgattctctta |
26977338 |
T |
|
| Q |
407 |
acagcattccaatgctctttacccggatccgccataaaccgactaaccactcccactgcttgtgcaatgtctggtcttgtacatatc |
493 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
26977339 |
acagcattccaatgctctttacccggatccgccataaaccgactaaccactcccactgcttgtgcaatgtctggtcttgtacatatc |
26977425 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #3
Raw Score: 231; E-Value: 1e-127
Query Start/End: Original strand, 7 - 493
Target Start/End: Original strand, 1472511 - 1472996
Alignment:
| Q |
7 |
tcgaagaatatgatattgaacacctatgtgtttcgtccttgaatgaaaagctggattccttgcaatgtgcaaggcactctgactgtcacaatacacagta |
106 |
Q |
| |
|
||||| || ||| ||||||||| |||||||||| || || |||||||| ||||||| | |||||||||||| |||||||||||||||||||||||| | |
|
|
| T |
1472511 |
tcgaacaaaatggtattgaacatctatgtgttttgttctcgaatgaaagactggattacatgcaatgtgcaatgcactctgactgtcacaatacacaaca |
1472610 |
T |
|
| Q |
107 |
atttgttcttgcttgtgcccgagttcctccattaacctttgcatccaaatagcttccttgcatgcttgagtagctgccatgtactccgcttctgtcgttg |
206 |
Q |
| |
|
||||||| ||| ||||| ||||||| ||||||| ||||| |||||||||||||||||||| ||||| ||||||||||| || || |||||||| || | |
|
|
| T |
1472611 |
atttgttgttgactgtgcacgagttcttccattagtctttgtatccaaatagcttccttgcaagcttgcgtagctgccatatattcagcttctgtagtag |
1472710 |
T |
|
| Q |
207 |
acagagctacaaccgtttgtaacttggacaaccaacttactgctcctcctgcaagcgtgaacacataaccagtagtagattttcttttatcatgatcacc |
306 |
Q |
| |
|
| |||||||| | | |||||| || ||||||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||||||| ||||||| |
|
|
| T |
1472711 |
agagagctacga-caattgtaattttgacaaccaacttactgctcctcctgcaagtgtgaacacataaccagtagtagatcttcttttatcaagatcacc |
1472809 |
T |
|
| Q |
307 |
tgcaaaatctgaatcaacataaccccagacagttaactctgatcctccgaaacataccgcaacacctgaggttcctttaatgtacctcatgattctctta |
406 |
Q |
| |
|
|||||||||||||||||||||||| ||| | || || |||||| |||||||| |||||| || |||||||||| || || |||| |||||||||| |
|
|
| T |
1472810 |
tgcaaaatctgaatcaacataacctttgacgataaattccaatcctctgaaacataatgcaacatctaaggttccttttatatatctcaggattctctta |
1472909 |
T |
|
| Q |
407 |
acagcattccaatgctctttacccggatccgccataaaccgactaaccactcccactgcttgtgcaatgtctggtcttgtacatatc |
493 |
Q |
| |
|
||||||| ||||||||||||||| |||||||||||||| ||||||||| |||||||||||||||||||||||| |||||||||||| |
|
|
| T |
1472910 |
acagcatcccaatgctctttaccaggatccgccataaatcgactaaccgctcccactgcttgtgcaatgtctgaccttgtacatatc |
1472996 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #4
Raw Score: 166; E-Value: 1e-88
Query Start/End: Original strand, 19 - 493
Target Start/End: Complemental strand, 21965640 - 21965178
Alignment:
| Q |
19 |
atattgaacacctatgtgtttcgtccttgaatgaaaagctggattccttgcaatgtgcaaggcactctgactgtcacaatacacagtaatttgttcttgc |
118 |
Q |
| |
|
||||||||| ||| |||| | ||| ||||||||||||| ||||||||||| ||||||||||| ||||||||||||| ||||||| ||||| ||| ||| |
|
|
| T |
21965640 |
atattgaacgcctgtgtgctccgttcttgaatgaaaagttggattccttgaaatgtgcaaggtactctgactgtca--atacacaataattcgttgctgc |
21965543 |
T |
|
| Q |
119 |
ttgtgcccgagttcctccattaacctttgcatccaaatagcttccttgcatgcttgagtagctgccatgtactccgcttctgtcgttgacagagctacaa |
218 |
Q |
| |
|
|| |||| |||| ||| ||||||||| |||||||||||| |||| |||||||| ||||||| | ||||| |||| || ||||||||||||||||| |
|
|
| T |
21965542 |
ttatgcctaagttgctcaattaaccttcgcatccaaatagtttccatgcatgctaaggtagctgtcttgtacgaagcttttgacgttgacagagctacaa |
21965443 |
T |
|
| Q |
219 |
ccgtttgtaacttggacaaccaacttactgctcctcctgcaagcgtgaacacataaccagtagtagattttcttttatcatgatcacctgcaaaatctga |
318 |
Q |
| |
|
||||||||||||| |||||||||||||||| || || ||||||||||||||| ||| |||| |||||||| |||||||||||| |||||||| || |
|
|
| T |
21965442 |
tagtttgtaacttgggtaaccaacttactgctcatcttggaagcgtgaacacatatccaatagttgattttctattatcatgatcaagtgcaaaattcga |
21965343 |
T |
|
| Q |
319 |
atcaacataaccccagacagttaactctgatcctccgaaacataccgcaacacctgaggttcctttaatgtacctcatgattctcttaacagcattccaa |
418 |
Q |
| |
|
||||| |||||||| || |||||||| | ||||||||||| ||| ||| |||||||||||||||||||| || |||| ||| || ||||| | |
|
|
| T |
21965342 |
atcaatataacccctgatagttaactttaatcctccgaaa-atattgca-------aggttcctttaatgtacctcttg-ttcttttaccaacattctga |
21965252 |
T |
|
| Q |
419 |
tgctctttacccggatccgccataaaccgactaaccactcccactgcttgtgcaatgtctggtcttgtacatatc |
493 |
Q |
| |
|
||||||||| ||| ||| ||||||||||||||||| |||||||||||||||||||||||||||||| |||||||| |
|
|
| T |
21965251 |
tgctcttta-ccgaatctgccataaaccgactaactactcccactgcttgtgcaatgtctggtcttttacatatc |
21965178 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #5
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 139 - 261
Target Start/End: Complemental strand, 18967241 - 18967120
Alignment:
| Q |
139 |
taacctttgcatccaaatagcttccttgcatgcttgagtagctgccatgtactccgcttctgtcgttgacagagctacaaccgtttgtaacttggacaac |
238 |
Q |
| |
|
|||| ||||||||||||||||||| ||||||||||| |||||||| |||||||| |||||||||||||||||||||||||| | |||||||||||| ||| |
|
|
| T |
18967241 |
taacgtttgcatccaaatagcttcattgcatgcttgggtagctgcaatgtactcagcttctgtcgttgacagagctacaacag-ttgtaacttggataac |
18967143 |
T |
|
| Q |
239 |
caacttactgctcctcctgcaag |
261 |
Q |
| |
|
||||||||||||||||||||||| |
|
|
| T |
18967142 |
caacttactgctcctcctgcaag |
18967120 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #6
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 5 - 90
Target Start/End: Complemental strand, 18967341 - 18967256
Alignment:
| Q |
5 |
tgtcgaagaatatgatattgaacacctatgtgtttcgtccttgaatgaaaagctggattccttgcaatgtgcaaggcactctgact |
90 |
Q |
| |
|
||||||| || |||||||| ||| |||||||||||||||||||||||||||| |||||||||||||||||| |||||||||||||| |
|
|
| T |
18967341 |
tgtcgaacaaaatgatatttaacgcctatgtgtttcgtccttgaatgaaaagttggattccttgcaatgtgtaaggcactctgact |
18967256 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3 (Bit Score: 439; Significance: 0; HSPs: 7)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 439; E-Value: 0
Query Start/End: Original strand, 7 - 493
Target Start/End: Original strand, 5819321 - 5819807
Alignment:
| Q |
7 |
tcgaagaatatgatattgaacacctatgtgtttcgtccttgaatgaaaagctggattccttgcaatgtgcaaggcactctgactgtcacaatacacagta |
106 |
Q |
| |
|
||||| || |||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
5819321 |
tcgaacaaaatgatattgaacgcctatgtgcttcgtccttgaatgaaaagctggattccttgcaatgtgcaaggcactctgactgtcacaatacacagta |
5819420 |
T |
|
| Q |
107 |
atttgttcttgcttgtgcccgagttcctccattaacctttgcatccaaatagcttccttgcatgcttgagtagctgccatgtactccgcttctgtcgttg |
206 |
Q |
| |
|
|||| || |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||||||||||||||||| ||||||||||||| |
|
|
| T |
5819421 |
attttctcctgcttgtgcccgagttcctccattaacctttgcatccagatagcttccttgcatgcttgggtagctgccatgtactcagcttctgtcgttg |
5819520 |
T |
|
| Q |
207 |
acagagctacaaccgtttgtaacttggacaaccaacttactgctcctcctgcaagcgtgaacacataaccagtagtagattttcttttatcatgatcacc |
306 |
Q |
| |
|
||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
5819521 |
acagagctacaacagtttgtaacttggacaaccaacttactgctcctcctgcaagcgtgaacacataaccagtagtagattttcttttatcatgatcacc |
5819620 |
T |
|
| Q |
307 |
tgcaaaatctgaatcaacataaccccagacagttaactctgatcctccgaaacataccgcaacacctgaggttcctttaatgtacctcatgattctctta |
406 |
Q |
| |
|
|||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
5819621 |
tgcaaaatctgaatcaacataacccctgacagttaactctgatcctccgaaacataccgcaacacctgaggttcctttaatgtacctcatgattctctta |
5819720 |
T |
|
| Q |
407 |
acagcattccaatgctctttacccggatccgccataaaccgactaaccactcccactgcttgtgcaatgtctggtcttgtacatatc |
493 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
5819721 |
acagcattccaatgctctttacccggatccgccataaaccgactaaccactcccactgcttgtgcaatgtctggtcttgtacatatc |
5819807 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #2
Raw Score: 427; E-Value: 0
Query Start/End: Original strand, 7 - 493
Target Start/End: Complemental strand, 54545416 - 54544930
Alignment:
| Q |
7 |
tcgaagaatatgatattgaacacctatgtgtttcgtccttgaatgaaaagctggattccttgcaatgtgcaaggcactctgactgtcacaatacacagta |
106 |
Q |
| |
|
||||| || |||||||||||| |||||||||||||||||||||||||||| || |||||||||||||||||| |||||||||||||||||||||||| || |
|
|
| T |
54545416 |
tcgaataaaatgatattgaacgcctatgtgtttcgtccttgaatgaaaagttgaattccttgcaatgtgcaatgcactctgactgtcacaatacacaata |
54545317 |
T |
|
| Q |
107 |
atttgttcttgcttgtgcccgagttcctccattaacctttgcatccaaatagcttccttgcatgcttgagtagctgccatgtactccgcttctgtcgttg |
206 |
Q |
| |
|
|||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||| |
|
|
| T |
54545316 |
atttgttcctgcttgtgcccgagttcctccattaacctttgcatccaaatagcttccttgcatgcttgggtagctgccatgtactcagcttctgtcgttg |
54545217 |
T |
|
| Q |
207 |
acagagctacaaccgtttgtaacttggacaaccaacttactgctcctcctgcaagcgtgaacacataaccagtagtagattttcttttatcatgatcacc |
306 |
Q |
| |
|
||||||||||||| ||||||||||||||||||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
54545216 |
acagagctacaacagtttgtaacttggacaaccaacttactgctcctccggcaagtgtgaacacataaccagtagtagattttcttttatcatgatcacc |
54545117 |
T |
|
| Q |
307 |
tgcaaaatctgaatcaacataaccccagacagttaactctgatcctccgaaacataccgcaacacctgaggttcctttaatgtacctcatgattctctta |
406 |
Q |
| |
|
|||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
54545116 |
tgcaaaatctgaatcaacataacccctgacagttaactctgatcctccgaaacataccgcaacacctgaggttcctttaatgtacctcatgattctctta |
54545017 |
T |
|
| Q |
407 |
acagcattccaatgctctttacccggatccgccataaaccgactaaccactcccactgcttgtgcaatgtctggtcttgtacatatc |
493 |
Q |
| |
|
||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
54545016 |
acaacattccaatgctctttacccggatccgccataaaccgactaaccactcccactgcttgtgcaatgtctggtcttgtacatatc |
54544930 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #3
Raw Score: 243; E-Value: 1e-134
Query Start/End: Original strand, 7 - 493
Target Start/End: Complemental strand, 42589219 - 42588733
Alignment:
| Q |
7 |
tcgaagaatatgatattgaacacctatgtgtttcgtccttgaatgaaaagctggattccttgcaatgtgcaaggcactctgactgtcacaatacacagta |
106 |
Q |
| |
|
||||| || ||| |||||||||||||||||||| || || |||||||| |||||||||||||||||||||| ||||| |||||||||||||||||| | |
|
|
| T |
42589219 |
tcgaacaaaatggtattgaacacctatgtgttttgttctcgaatgaaagactggattccttgcaatgtgcaatgcactatgactgtcacaatacacaaca |
42589120 |
T |
|
| Q |
107 |
atttgttcttgcttgtgcccgagttcctccattaacctttgcatccaaatagcttccttgcatgcttgagtagctgccatgtactccgcttctgtcgttg |
206 |
Q |
| |
|
||||||| ||| ||||||||||||| ||||||| ||||| |||||||||||||||||||| ||||| ||||||||||| || || |||||||| || | |
|
|
| T |
42589119 |
atttgttgttgactgtgcccgagttcttccattagtctttgtatccaaatagcttccttgcaagcttgcgtagctgccatatattcagcttctgtagtag |
42589020 |
T |
|
| Q |
207 |
acagagctacaaccgtttgtaacttggacaaccaacttactgctcctcctgcaagcgtgaacacataaccagtagtagattttcttttatcatgatcacc |
306 |
Q |
| |
|
| |||||||| || | |||||| || |||||||||||||| |||||||||||||| |||||||||||||||| ||||||| ||||||||||| ||||||| |
|
|
| T |
42589019 |
atagagctacgacagattgtaattttgacaaccaacttaccgctcctcctgcaagtgtgaacacataaccagcagtagatcttcttttatcaagatcacc |
42588920 |
T |
|
| Q |
307 |
tgcaaaatctgaatcaacataaccccagacagttaactctgatcctccgaaacataccgcaacacctgaggttcctttaatgtacctcatgattctctta |
406 |
Q |
| |
|
|||||||||||||||||||||||| |||| | || || |||||| || ||||| |||||| || |||||||||| || || |||| |||||||||| |
|
|
| T |
42588919 |
tgcaaaatctgaatcaacataacctttgacaataaattccaatcctctgacacataatgcaacatctaaggttccttttatatatctcaggattctctta |
42588820 |
T |
|
| Q |
407 |
acagcattccaatgctctttacccggatccgccataaaccgactaaccactcccactgcttgtgcaatgtctggtcttgtacatatc |
493 |
Q |
| |
|
||||||| |||||| |||||||| |||||||||||||| ||||||||| ||||||||||||||||||||||||| |||||||||||| |
|
|
| T |
42588819 |
acagcatcccaatgttctttaccaggatccgccataaatcgactaaccgctcccactgcttgtgcaatgtctggccttgtacatatc |
42588733 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #4
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 93 - 493
Target Start/End: Complemental strand, 25881030 - 25880628
Alignment:
| Q |
93 |
cacaatacacagtaatttgttcttgcttgtgcccgagttcctccattaacctttgcatccaaatagcttccttgcatgcttgagtagctgccatgtactc |
192 |
Q |
| |
|
||||||||||| |||||||| ||| ||||||| || ||| ||||||| |||||| |||||||||||||||| ||| ||||| |||| | | || || || |
|
|
| T |
25881030 |
cacaatacacaacaatttgttgttgattgtgcctga-ttcttccattagcctttgtatccaaatagcttcctagcaagcttgcgtaggtacaatatattc |
25880932 |
T |
|
| Q |
193 |
cgcttctgtcgttgacagagctacaaccgtttgtaacttggacaaccaacttactgctcctcctgcaagcgtgaacacataaccagtagtaga---tttt |
289 |
Q |
| |
|
|| | ||| || || ||||| ||||| ||||||| || ||||||||||||| ||||||||||||||| ||||||||||||| |||||||| |||| |
|
|
| T |
25880931 |
agcatatgtagtagatagagcgacaacaatttgtaattttgacaaccaacttattgctcctcctgcaagtatgaacacataaccggtagtagattttttt |
25880832 |
T |
|
| Q |
290 |
cttttatcatgatcacctgcaaaatctgaatcaacataaccccagacagttaactctgatcctccgaaacataccgcaacacctgaggttcc---tttaa |
386 |
Q |
| |
|
|||||||| |||| ||||||||||||||||| ||||||||| ||| | || || | || |||||||| |||||| |||||||| | ||| | |
|
|
| T |
25880831 |
tttttatcaagatctcctgcaaaatctgaatctacataaccctttacaataaattccaa---tctgaaacataatgcaacatctgaggtttcctttttta |
25880735 |
T |
|
| Q |
387 |
tgtacctcatgattctcttaacagcattccaatgctctttacccggatccgccataaaccgactaaccactcccactgcttgtgcaatgtctggtcttgt |
486 |
Q |
| |
|
| || |||| |||||| |||| | ||| |||||||||||||| |||||||||||||| ||||||| ||||||||||||||||||||||||||||||| |
|
|
| T |
25880734 |
tatatctcacgattcttttaataacatctcaatgctctttaccaggatccgccataaatcgactaattgctcccactgcttgtgcaatgtctggtcttgt |
25880635 |
T |
|
| Q |
487 |
acatatc |
493 |
Q |
| |
|
||||||| |
|
|
| T |
25880634 |
acatatc |
25880628 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #5
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 366 - 493
Target Start/End: Complemental strand, 25880567 - 25880440
Alignment:
| Q |
366 |
caacacctgaggttcctttaatgtacctcatgattctcttaacagcattccaatgctctttacccggatccgccataaaccgactaaccactcccactgc |
465 |
Q |
| |
|
||||| ||||||||||||| || || |||| |||||| || | | ||| ||||||||||||||| |||||||||||||| ||||||| ||| ||||||| |
|
|
| T |
25880567 |
caacatctgaggttccttttatatatctcaggattcttttgataccatcccaatgctctttaccaggatccgccataaatcgactaattacttccactgc |
25880468 |
T |
|
| Q |
466 |
ttgtgcaatgtctggtcttgtacatatc |
493 |
Q |
| |
|
|||||||||||||||||||||||||||| |
|
|
| T |
25880467 |
ttgtgcaatgtctggtcttgtacatatc |
25880440 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #6
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 222 - 331
Target Start/End: Complemental strand, 25880348 - 25880239
Alignment:
| Q |
222 |
tttgtaacttggacaaccaacttactgctcctcctgcaagcgtgaacacataaccagtagtagattttcttttatcatgatcacctgcaaaatctgaatc |
321 |
Q |
| |
|
||||||| || ||||||||||||| |||||||| |||||| |||||||||||||| ||| ||||| ||||||||||| |||||||| ||||||||||| |
|
|
| T |
25880348 |
tttgtaattttgacaaccaacttattgctcctcttgcaagtgtgaacacataaccggtattagatattcttttatcacgatcacctataaaatctgaatt |
25880249 |
T |
|
| Q |
322 |
aacataaccc |
331 |
Q |
| |
|
|||| ||||| |
|
|
| T |
25880248 |
aacaaaaccc |
25880239 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #7
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 416 - 493
Target Start/End: Complemental strand, 25878161 - 25878084
Alignment:
| Q |
416 |
caatgctctttacccggatccgccataaaccgactaaccactcccactgcttgtgcaatgtctggtcttgtacatatc |
493 |
Q |
| |
|
|||||||||||||| |||||||||||||| ||||||| || ||||||||||||||||||| |||||||||||||| |
|
|
| T |
25878161 |
caatgctctttaccaggatccgccataaatcgactaattgttctcactgcttgtgcaatgtctagtcttgtacatatc |
25878084 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2 (Bit Score: 427; Significance: 0; HSPs: 3)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 427; E-Value: 0
Query Start/End: Original strand, 7 - 493
Target Start/End: Complemental strand, 829750 - 829264
Alignment:
| Q |
7 |
tcgaagaatatgatattgaacacctatgtgtttcgtccttgaatgaaaagctggattccttgcaatgtgcaaggcactctgactgtcacaatacacagta |
106 |
Q |
| |
|
||||| || |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
829750 |
tcgaacaaaatgatattgaacgcctatgtgtttcgtccttgaatgaaaagctggattccttgcaatgtgcaaggcactctgactgtcacaatacacagta |
829651 |
T |
|
| Q |
107 |
atttgttcttgcttgtgcccgagttcctccattaacctttgcatccaaatagcttccttgcatgcttgagtagctgccatgtactccgcttctgtcgttg |
206 |
Q |
| |
|
|||| || |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||||||||||||||||| ||||||||||||| |
|
|
| T |
829650 |
attttctcctgcttgtgcccgagttcctccattaacctttgcatccagatagcttccttgcatgcttgggtagctgccatgtactcagcttctgtcgttg |
829551 |
T |
|
| Q |
207 |
acagagctacaaccgtttgtaacttggacaaccaacttactgctcctcctgcaagcgtgaacacataaccagtagtagattttcttttatcatgatcacc |
306 |
Q |
| |
|
||||||||||||| |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |
|
|
| T |
829550 |
acagagctacaacagtttgtaacttggataaccaacttactgctcctcctgcaagcgtgaacacataaccagtagtagattttcttttatcctgatcacc |
829451 |
T |
|
| Q |
307 |
tgcaaaatctgaatcaacataaccccagacagttaactctgatcctccgaaacataccgcaacacctgaggttcctttaatgtacctcatgattctctta |
406 |
Q |
| |
|
|||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| |
|
|
| T |
829450 |
tgcaaaatctgaatcaacataacccctgacagttaactctgatcctccgaaacataccgcaacacctggggttcctttaatgtacctcatgattctctta |
829351 |
T |
|
| Q |
407 |
acagcattccaatgctctttacccggatccgccataaaccgactaaccactcccactgcttgtgcaatgtctggtcttgtacatatc |
493 |
Q |
| |
|
||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
829350 |
acaacattccaatgctctttacccggatccgccataaaccgactaaccactcccactgcttgtgcaatgtctggtcttgtacatatc |
829264 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #2
Raw Score: 284; E-Value: 1e-159
Query Start/End: Original strand, 7 - 493
Target Start/End: Complemental strand, 28715344 - 28714868
Alignment:
| Q |
7 |
tcgaagaatatgatattgaacacctatgtgtttcgtccttgaatgaaaagctggattccttgcaatgtgcaaggcactctgactgtcacaatacacagta |
106 |
Q |
| |
|
||||| || ||||||||||||||||||||| ||| |||||||| |||||| |||||| ||||||||||| | ||| ||||||||||||||| |
|
|
| T |
28715344 |
tcgaacaaaatgatattgaacacctatgtgcttcatccttgaacgaaaagttggatt----------tgcaaggcactataactatcacaatacacagta |
28715255 |
T |
|
| Q |
107 |
atttgttcttgcttgtgcccgagttcctccattaacctttgcatccaaatagcttccttgcatgcttgagtagctgccatgtactccgcttctgtcgttg |
206 |
Q |
| |
|
||||| || ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||| ||||| |
|
|
| T |
28715254 |
atttgctcctgcttgtgcccgagtacctccattaacctttgcatccaaatagcttccttgcatgcttgggtagctgccatgtactcagcttctgacgttg |
28715155 |
T |
|
| Q |
207 |
acagagctacaaccgtttgtaacttggacaaccaacttactgctcctcctgcaagcgtgaacacataaccagtagtagattttcttttatcatgatcacc |
306 |
Q |
| |
|
||| ||||||||| |||||||||||||| ||||||||||||||||||| |||||| ||||||| ||||||||| ||||||||||| |||||||||||| |
|
|
| T |
28715154 |
acatagctacaacagtttgtaacttggataaccaacttactgctcctctcgcaagcatgaacacgtaaccagtaaaagattttctttcatcatgatcacc |
28715055 |
T |
|
| Q |
307 |
tgcaaaatctgaatcaacataaccccagacagttaactctgatcctccgaaacataccgcaacacctgaggttcctttaatgtacctcatgattctctta |
406 |
Q |
| |
|
|||||||||||||||||||||||| |||| |||||||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||| |
|
|
| T |
28715054 |
ggcaaaatctgaatcaacataacccatgacaattaactctgatcctccgaaacatattgcaacacatgaggttcctttaatgtacctcatgattctctta |
28714955 |
T |
|
| Q |
407 |
acagcattccaatgctctttacccggatccgccataaaccgactaaccactcccactgcttgtgcaatgtctggtcttgtacatatc |
493 |
Q |
| |
|
||| ||||||||||||||||| ||||| | ||||||||||||||||||||||||| ||||||||| |||| ||||||||||||| |
|
|
| T |
28714954 |
acaacattccaatgctctttataaggatctgtcataaaccgactaaccactcccactaattgtgcaatctctgatcttgtacatatc |
28714868 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #3
Raw Score: 164; E-Value: 2e-87
Query Start/End: Original strand, 16 - 493
Target Start/End: Original strand, 13840984 - 13841450
Alignment:
| Q |
16 |
atgatattgaacacctatgtgtttcgtccttgaatgaaaagctggattccttgcaatgtgcaaggcactctgactgtcacaatacacagtaatttgttct |
115 |
Q |
| |
|
|||||||||||||| ||||||||| ||||||||||||||| || ||| ||||||||||| |||||| ||| | |||||||||||| ||||||||| | | |
|
|
| T |
13840984 |
atgatattgaacacttatgtgttttgtccttgaatgaaaaa-tgaatttcttgcaatgtgaaaggcattctaattgtcacaatacatagtaatttgatgt |
13841082 |
T |
|
| Q |
116 |
tgcttgtgcccgagttcctccattaacctttgcatccaaatagcttccttgcatgcttgagtagctgccatgtactccgcttctgtcgttgacagagcta |
215 |
Q |
| |
|
|| |||||||| ||||||||||||||||||||||| |||||| |||||||||| || || | || |||||||||||| | || ||||||||||| ||||| |
|
|
| T |
13841083 |
tgtttgtgcccaagttcctccattaacctttgcattcaaataacttccttgcaagcatgggaagatgccatgtactcag-ttttgtcgttgacaaagcta |
13841181 |
T |
|
| Q |
216 |
caaccgtttgtaacttggacaaccaacttactgctcctcctgcaagcgtgaacacataaccagtagtagattttcttttatcatgatcacctgcaaaatc |
315 |
Q |
| |
|
|| || ||||||||| ||||||||||| ||||||| | || ||||||||||||| | |||||||||| | ||||||||||||| || |||||| |
|
|
| T |
13841182 |
ca-----ttctaacttggataaccaacttaccgctcctcgtataaacgtgaacacataatc---agtagattttatattatcatgatcacttgtaaaatc |
13841273 |
T |
|
| Q |
316 |
tgaatcaacataaccccagacagttaactctgatcctccgaaacataccgcaacacctgaggttcctttaatgtacctcatgattctcttaacagcattc |
415 |
Q |
| |
|
|||||||||||||||| | || |||||||||||||||||||||||| ||||||| ||||||| |||| || || |||| |||| |||||| ||| |
|
|
| T |
13841274 |
tgaatcaacataacccttgtcatttaactctgatcctccgaaacatattgcaacacttgaggtttctttgatatatctcaaaattcatttaaca-aattt |
13841372 |
T |
|
| Q |
416 |
caatgctctttacccggatccgccataaaccgactaaccactcccactgcttgtgcaatgtctggtcttgtacatatc |
493 |
Q |
| |
|
|| | | |||||| |||| ||||||||||||||||||||||||||| ||||| | |||||||||||||||||||| |
|
|
| T |
13841373 |
aaaggatatttaccaggatatgccataaaccgactaaccactcccactatttgtgtagtgtctggtcttgtacatatc |
13841450 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0074 (Bit Score: 403; Significance: 0; HSPs: 1)
Name: scaffold0074
Description:
Target: scaffold0074; HSP #1
Raw Score: 403; E-Value: 0
Query Start/End: Original strand, 7 - 493
Target Start/End: Original strand, 28081 - 28567
Alignment:
| Q |
7 |
tcgaagaatatgatattgaacacctatgtgtttcgtccttgaatgaaaagctggattccttgcaatgtgcaaggcactctgactgtcacaatacacagta |
106 |
Q |
| |
|
||||| || |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
28081 |
tcgaacaaaatgatattgaacgcctatgtgtttcgtccttgaatgaaaagctggattccttgcaatgtgcaaggcactctgactgtcacaatacacagta |
28180 |
T |
|
| Q |
107 |
atttgttcttgcttgtgcccgagttcctccattaacctttgcatccaaatagcttccttgcatgcttgagtagctgccatgtactccgcttctgtcgttg |
206 |
Q |
| |
|
|||| || ||||||||| ||||||||||||| |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
28181 |
atttaatcctgcttgtgcacgagttcctccataaacctttgcaaccaaatagcttccttgcatgcttgagtagctgccatgtactccgcttctgtcgttg |
28280 |
T |
|
| Q |
207 |
acagagctacaaccgtttgtaacttggacaaccaacttactgctcctcctgcaagcgtgaacacataaccagtagtagattttcttttatcatgatcacc |
306 |
Q |
| |
|
||||||||||||| |||||||||||||| |||||||||||||||||||||| ||| |||||||||||| ||||||||||||||||||||||||||||||| |
|
|
| T |
28281 |
acagagctacaacagtttgtaacttggataaccaacttactgctcctcctgaaagtgtgaacacataatcagtagtagattttcttttatcatgatcacc |
28380 |
T |
|
| Q |
307 |
tgcaaaatctgaatcaacataaccccagacagttaactctgatcctccgaaacataccgcaacacctgaggttcctttaatgtacctcatgattctctta |
406 |
Q |
| |
|
| |||||||||||||||||||||||| |||||||||||||||||||| |||||||| |||||| | ||||||||||||||||||||||||||||||||| |
|
|
| T |
28381 |
tacaaaatctgaatcaacataacccctgacagttaactctgatcctctgaaacatattgcaacatccgaggttcctttaatgtacctcatgattctctta |
28480 |
T |
|
| Q |
407 |
acagcattccaatgctctttacccggatccgccataaaccgactaaccactcccactgcttgtgcaatgtctggtcttgtacatatc |
493 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
28481 |
acagcattccaatgctctttacccggatccgccataaaccgactaaccactcccactgcttgtgcaatgtctggtcttgtacatatc |
28567 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7 (Bit Score: 248; Significance: 1e-137; HSPs: 4)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 248; E-Value: 1e-137
Query Start/End: Original strand, 45 - 455
Target Start/End: Original strand, 2324197 - 2324601
Alignment:
| Q |
45 |
ttgaatgaaaagctggattccttgcaatgtgcaaggcactctgactgtcacaatacacagtaatttgttcttgcttgtgcccgagttcctccattaacct |
144 |
Q |
| |
|
|||||||||||| ||||||||||||||||| || ||||||| ||||||||| ||| |||| || ||||||||||||||||||||||||||||| |
|
|
| T |
2324197 |
ttgaatgaaaagatggattccttgcaatgtccac------ctgactgccacaatacaaagtgattttctcctgcttgtgcccgagttcctccattaacct |
2324290 |
T |
|
| Q |
145 |
ttgcatccaaatagcttccttgcatgcttgagtagctgccatgtactccgcttctgtcgttgacagagctacaaccgtttgtaacttggacaaccaactt |
244 |
Q |
| |
|
|||||||||||||||||||||||||||||| |||||||||||||||| |||||||||||||||| ||||||||| |||||||||||||| ||| ||||| |
|
|
| T |
2324291 |
ttgcatccaaatagcttccttgcatgcttgggtagctgccatgtacttagcttctgtcgttgacaaagctacaacagtttgtaacttggataactaactt |
2324390 |
T |
|
| Q |
245 |
actgctcctcctgcaagcgtgaacacataaccagtagtagattttcttttatcatgatcacctgcaaaatctgaatcaacataaccccagacagttaact |
344 |
Q |
| |
|
|| ||||||||||||| ||||||||||||| |||||||||||||||||||||||||||||||||||||||||| |||| | | |||| || ||||||| |
|
|
| T |
2324391 |
acaactcctcctgcaagtgtgaacacataactagtagtagattttcttttatcatgatcacctgcaaaatctgactcaagaaatcccccaacggttaact |
2324490 |
T |
|
| Q |
345 |
ctgatcctccgaaacataccgcaacacctgaggttcctttaatgtacctcatgattctcttaacagcattccaatgctctttacccggatccgccataaa |
444 |
Q |
| |
|
|||||||||||||||||| |||||||||||||||||||| || ||| ||||||||||||||||||||||||||||||||||||| ||||||||||||| |
|
|
| T |
2324491 |
ctgatcctccgaaacatattgcaacacctgaggttccttttatatacatcatgattctcttaacagcattccaatgctctttaccaagatccgccataaa |
2324590 |
T |
|
| Q |
445 |
ccgactaacca |
455 |
Q |
| |
|
||||| ||||| |
|
|
| T |
2324591 |
ccgaccaacca |
2324601 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #2
Raw Score: 178; E-Value: 8e-96
Query Start/End: Original strand, 7 - 408
Target Start/End: Original strand, 7504809 - 7505210
Alignment:
| Q |
7 |
tcgaagaatatgatattgaacacctatgtgtttcgtccttgaatgaaaagctggattccttgcaatgtgcaaggcactctgactgtcacaatacacagta |
106 |
Q |
| |
|
||||| || ||| ||||||||| |||||||||| || || |||||||| |||||||||||||||||||||| |||||||||||||||||||||||| | |
|
|
| T |
7504809 |
tcgaacaaaatggtattgaacatctatgtgttttgttctcgaatgaaagactggattccttgcaatgtgcaatgcactctgactgtcacaatacacaaca |
7504908 |
T |
|
| Q |
107 |
atttgttcttgcttgtgcccgagttcctccattaacctttgcatccaaatagcttccttgcatgcttgagtagctgccatgtactccgcttctgtcgttg |
206 |
Q |
| |
|
||||||| ||| ||||| ||||||| ||||||| ||||| |||||||||||||||||||| ||||| ||||||||||| || || |||||||| || | |
|
|
| T |
7504909 |
atttgttgttgactgtgcacgagttcttccattagtctttgtatccaaatagcttccttgcaagcttgcgtagctgccatatattcagcttctgtagtag |
7505008 |
T |
|
| Q |
207 |
acagagctacaaccgtttgtaacttggacaaccaacttactgctcctcctgcaagcgtgaacacataaccagtagtagattttcttttatcatgatcacc |
306 |
Q |
| |
|
| |||||||| || |||||| || ||||| |||||||| |||||||||||||| |||||||||||||||||||||||| ||||||||||| ||||||| |
|
|
| T |
7505009 |
atagagctacgacaaattgtaattttgacaatcaacttaccgctcctcctgcaagtgtgaacacataaccagtagtagatcttcttttatcaagatcacc |
7505108 |
T |
|
| Q |
307 |
tgcaaaatctgaatcaacataaccccagacagttaactctgatcctccgaaacataccgcaacacctgaggttcctttaatgtacctcatgattctctta |
406 |
Q |
| |
|
|||||||||||||||||||||||| |||| | || || |||||| |||||||| |||||| || |||||||||| || || |||| |||||||||| |
|
|
| T |
7505109 |
tgcaaaatctgaatcaacataacctttgacaataaattccaatcctctgaaacataatgcaacatctaaggttccttttatatatctcaggattctctta |
7505208 |
T |
|
| Q |
407 |
ac |
408 |
Q |
| |
|
|| |
|
|
| T |
7505209 |
ac |
7505210 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #3
Raw Score: 95; E-Value: 3e-46
Query Start/End: Original strand, 20 - 362
Target Start/End: Complemental strand, 22510175 - 22509836
Alignment:
| Q |
20 |
tattgaacacctatgtgtttcgtccttgaatgaaaagctggattccttgcaatgtgcaaggcactctgactgtcacaatacacagtaatttgttcttgct |
119 |
Q |
| |
|
|||||||| ||| |||| ||||| | |||| |||| |||||| |||| |||||||||| |||||||||| |||||||||| ||||||||||| | || |
|
|
| T |
22510175 |
tattgaacgcctttgtgcatcgtcttggaatacaaagttggattgcttgaaatgtgcaagacactctgactatcacaatacaaagtaatttgttgatact |
22510076 |
T |
|
| Q |
120 |
tgtgcccgagttcctccattaacctttgcatccaaatagcttccttgcatgcttgagta-gctgccatgtactccgcttctgtcgttgacagagctacaa |
218 |
Q |
| |
|
||||| |||||||||||||||||||| ||||||||||||||||||||| | | |||| || ||||||| || |||| | |||||||||||| ||| |
|
|
| T |
22510075 |
tgtgcgcgagttcctccattaaccttatcatccaaatagcttccttgcaaacct-agtatacttccatgtattcaatttctcttgttgacagagcttcaa |
22509977 |
T |
|
| Q |
219 |
ccgtttgtaacttggacaaccaacttactgctcctcctgcaagcgtgaacacataaccagtagtagattttctttt--atcatgatcacctgcaaaatct |
316 |
Q |
| |
|
| || ||||||||||||||||| |||||||||||| | ||| ||||| ||||| ||||| || || |||| ||||||||||||| |||||||| |
|
|
| T |
22509976 |
caattggtaacttggacaaccaaattactgctcctcttacaaatgtgaa-----aaccaatagtatatatttttttcaatcatgatcaccttcaaaatct |
22509882 |
T |
|
| Q |
317 |
gaatcaacataaccccagacagttaactctgatcctccgaaacata |
362 |
Q |
| |
|
||||||||||||| || | ||||||| ||||||||||||||||| |
|
|
| T |
22509881 |
gaatcaacataacacctaatggttaactttgatcctccgaaacata |
22509836 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #4
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 401 - 493
Target Start/End: Original strand, 7506016 - 7506108
Alignment:
| Q |
401 |
ctcttaacagcattccaatgctctttacccggatccgccataaaccgactaaccactcccactgcttgtgcaatgtctggtcttgtacatatc |
493 |
Q |
| |
|
||||||||| ||| ||||||||||||||| |||||||||||||| ||||| || ||||||||||||||||||||||||| |||||||||||| |
|
|
| T |
7506016 |
ctcttaacaacatcccaatgctctttaccaggatccgccataaattgactagccgctcccactgcttgtgcaatgtctggccttgtacatatc |
7506108 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1 (Bit Score: 95; Significance: 3e-46; HSPs: 3)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 95; E-Value: 3e-46
Query Start/End: Original strand, 282 - 492
Target Start/End: Complemental strand, 34973530 - 34973320
Alignment:
| Q |
282 |
tagattttcttttatcatgatcacctgcaaaatctgaatcaacataaccccagacagttaactctgatcctccgaaacataccgcaacacctgaggttcc |
381 |
Q |
| |
|
||||||||||||||| ||||||| |||||||||||||||| |||||||||| |||||||| | |||||||||||| |||| ||||||||||||||||| |
|
|
| T |
34973530 |
tagattttcttttattatgatcatctgcaaaatctgaatcgacataacccctaacagttaaatttgatcctccgaatcatattgcaacacctgaggttcc |
34973431 |
T |
|
| Q |
382 |
tttaatgtacctcatgattctcttaacagcattccaatgctctttacccggatccgccataaaccgactaaccactcccactgcttgtgcaatgtctggt |
481 |
Q |
| |
|
|||| |||||||||| ||||| | ||| |||| ||||||||||| |||||| ||| |||| |||||||||||| | ||| |||| |||||||| || |
|
|
| T |
34973430 |
tttattgtacctcataattctatcgacatcattttgatgctctttactaggatcctccacaaactgactaaccactctcgctgtttgttcaatgtcttgt |
34973331 |
T |
|
| Q |
482 |
cttgtacatat |
492 |
Q |
| |
|
||||||||||| |
|
|
| T |
34973330 |
cttgtacatat |
34973320 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #2
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 16 - 164
Target Start/End: Original strand, 41413635 - 41413783
Alignment:
| Q |
16 |
atgatattgaacacctatgtgtttcgtccttgaatgaaaagctggattccttgcaatgtgcaaggcactctgactgtcacaatacacagtaatttgttct |
115 |
Q |
| |
|
|||||||||||| |||| || | ||||||||||| || |||||||| ||||||||||||||| |||||| ||| |||||||| ||| ||||||||| | |
|
|
| T |
41413635 |
atgatattgaacgcctacatgccttgtccttgaatggaaggctggattacttgcaatgtgcaagacactctaactatcacaatatacaataatttgttat |
41413734 |
T |
|
| Q |
116 |
tgcttgtgcccgagttcctccattaacctttgcatccaaatagcttcct |
164 |
Q |
| |
|
|| |||| ||||||||| |||||| |||||||| |||||||||||| |
|
|
| T |
41413735 |
tgtctgtgtttgagttcctcaattaacatttgcatcaaaatagcttcct |
41413783 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #3
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 16 - 168
Target Start/End: Complemental strand, 34973743 - 34973589
Alignment:
| Q |
16 |
atgatattgaacacctatgtgtttcgtccttgaatgaaaa--gctggattccttgcaatgtgcaaggcactctgactgtcacaatacacagtaatttgtt |
113 |
Q |
| |
|
|||||||| || ||||| || |||||||||||||||||| | |||||| | | ||||||||||| |||| | ||| ||| |||||||| |||| | || |
|
|
| T |
34973743 |
atgatattaaatgcctatttgcttcgtccttgaatgaaaaaagttggatttcatacaatgtgcaagacactttaactttcataatacacaataatgtctt |
34973644 |
T |
|
| Q |
114 |
cttgcttgtgcccgagttcctccattaacctttgcatccaaatagcttccttgca |
168 |
Q |
| |
|
|||||||| | ||| |||||||||||||||||||||||| |||||||||||| |
|
|
| T |
34973643 |
gatgcttgtgtctaagtccctccattaacctttgcatccaaacagcttccttgca |
34973589 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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