View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: 454-NF4349-Insertion-11 (Length: 145)
Name: 454-NF4349-Insertion-11
Description: 454-NF4349
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] 454-NF4349-Insertion-11 |
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| [»] chr1 (1 HSPs) |
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Alignment Details
Target: chr1 (Bit Score: 141; Significance: 3e-74; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 141; E-Value: 3e-74
Query Start/End: Original strand, 1 - 145
Target Start/End: Complemental strand, 37164303 - 37164159
Alignment:
| Q |
1 |
aatctagcatttgactctaaacctcatatttactataacaacttctaaaccattcttcaataatctacattcaaacaaatttctattttggacaccattc |
100 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| |
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| T |
37164303 |
aatctagcatttgactctaaacctcatatttactataacaacttctaaaccattcttcaataatctacattcaaacatatttctattttggacaccattc |
37164204 |
T |
|
| Q |
101 |
tgaattgcacactccggtagggtttgacggaggattaccaccgcc |
145 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
37164203 |
tgaattgcacactccggtagggtttgacggaggattaccaccgcc |
37164159 |
T |
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