View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

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 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: 454-NF4349-Insertion-14 (Length: 116)

Name: 454-NF4349-Insertion-14
Description: 454-NF4349
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] 454-NF4349-Insertion-14
454-NF4349-Insertion-14
[»] chr1 (1 HSPs)
chr1 (4-95)||(10507855-10507946)


Alignment Details
Target: chr1 (Bit Score: 64; Significance: 2e-28; HSPs: 1)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 64; E-Value: 2e-28
Query Start/End: Original strand, 4 - 95
Target Start/End: Original strand, 10507855 - 10507946
Alignment:
4 tgtagtgtttggggttcaaattccaactcatgtatcaaaacaaattgtccataaggacgtattaaaacaaattgtccaagtagacctctcaa 95  Q
    ||||| |||||||||||| | ||| |||||||||| ||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||    
10507855 tgtagcgtttggggttcatactccgactcatgtattaaaacaaattgtccaaaaggatgtattaaaacaaattgtccaagtagacctctcaa 10507946  T

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