View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: 454-NF4349-Insertion-23 (Length: 128)
Name: 454-NF4349-Insertion-23
Description: 454-NF4349
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] 454-NF4349-Insertion-23 |
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Alignment Details
Target: chr2 (Bit Score: 109; Significance: 3e-55; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 109; E-Value: 3e-55
Query Start/End: Original strand, 12 - 124
Target Start/End: Original strand, 6188302 - 6188414
Alignment:
| Q |
12 |
aattcatcatggtacaaggtcatttccatgccaaaacataaagactatatacttcttcatcaagtctcatttacattagcactcactttgtgacatatgc |
111 |
Q |
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| T |
6188302 |
aattcatcatggtacaaggtcatttccatgccaaaacataaagactatatacttcttcatcaagtctcatttacattatcactcactttgtgacatatgc |
6188401 |
T |
|
| Q |
112 |
aaaaatattgtgt |
124 |
Q |
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||||||||||||| |
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| T |
6188402 |
aaaaatattgtgt |
6188414 |
T |
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