View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

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 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: 454-NF4354-Insertion-1 (Length: 54)

Name: 454-NF4354-Insertion-1
Description: 454-NF4354
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] 454-NF4354-Insertion-1
454-NF4354-Insertion-1
[»] chr8 (1 HSPs)
chr8 (7-54)||(2982974-2983021)


Alignment Details
Target: chr8 (Bit Score: 48; Significance: 2e-19; HSPs: 1)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 48; E-Value: 2e-19
Query Start/End: Original strand, 7 - 54
Target Start/End: Original strand, 2982974 - 2983021
Alignment:
7 caatattgttacttgtataccattttgttctttttatcttcttgaaaa 54  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||    
2982974 caatattgttacttgtataccattttgttctttttatcttcttgaaaa 2983021  T

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