View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: D611-LTR4-TNT-insertion-8 (Length: 424)

Name: D611-LTR4-TNT-insertion-8
Description: D611-LTR4
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] D611-LTR4-TNT-insertion-8
D611-LTR4-TNT-insertion-8
[»] chr4 (67 HSPs)
chr4 (8-413)||(54994848-54995253)
chr4 (232-413)||(22434182-22434363)
chr4 (232-413)||(45082785-45082966)
chr4 (226-413)||(15523232-15523419)
chr4 (227-413)||(20470872-20471058)
chr4 (227-413)||(23494804-23494990)
chr4 (232-413)||(12234690-12234871)
chr4 (232-413)||(25447250-25447431)
chr4 (232-413)||(46193408-46193589)
chr4 (228-408)||(48526547-48526727)
chr4 (217-413)||(51021157-51021352)
chr4 (227-413)||(4219920-4220106)
chr4 (223-413)||(11153140-11153330)
chr4 (228-413)||(18751598-18751783)
chr4 (232-407)||(25938038-25938213)
chr4 (232-406)||(2118296-2118470)
chr4 (246-413)||(12503453-12503620)
chr4 (232-390)||(46193790-46193947)
chr4 (232-390)||(23494446-23494603)
chr4 (232-390)||(33109687-33109844)
chr4 (225-355)||(33109883-33110013)
chr4 (227-346)||(25447664-25447783)
chr4 (232-346)||(11153575-11153689)
chr4 (227-390)||(22434563-22434723)
chr4 (227-390)||(25937668-25937830)
chr4 (227-389)||(12234327-12234488)
chr4 (232-390)||(38962204-38962361)
chr4 (232-390)||(48526199-48526355)
chr4 (232-389)||(4219560-4219716)
chr4 (228-346)||(2118723-2118841)
chr4 (232-390)||(15523619-15523776)
chr4 (217-390)||(22170322-22170493)
chr4 (227-390)||(51020795-51020957)
chr4 (227-344)||(54995498-54995614)
chr4 (232-343)||(18763951-18764062)
chr4 (227-346)||(45082430-45082548)
chr4 (232-346)||(20958288-20958401)
chr4 (232-346)||(35363028-35363143)
chr4 (225-343)||(48713777-48713895)
chr4 (228-355)||(16690935-16691062)
chr4 (247-346)||(43243708-43243807)
chr4 (232-346)||(44892576-44892690)
chr4 (225-335)||(48708291-48708401)
chr4 (232-357)||(10258304-10258429)
chr4 (236-341)||(20957196-20957301)
chr4 (282-355)||(43242323-43242396)
chr4 (226-343)||(48293591-48293708)
chr4 (247-355)||(43281210-43281317)
chr4 (297-390)||(12503821-12503913)
chr4 (232-355)||(48294961-48295085)
chr4 (232-299)||(16318251-16318318)
chr4 (232-355)||(16691491-16691613)
chr4 (232-355)||(44890520-44890643)
chr4 (317-390)||(17504061-17504133)
chr4 (167-228)||(17612560-17612621)
chr4 (229-402)||(40160465-40160636)
chr4 (167-229)||(2708097-2708159)
chr4 (290-346)||(44220805-44220861)
chr4 (170-228)||(2570704-2570762)
chr4 (178-228)||(9743816-9743866)
chr4 (297-390)||(17504345-17504437)
chr4 (175-221)||(1012520-1012566)
chr4 (328-390)||(35193406-35193467)
chr4 (175-228)||(5915039-5915092)
chr4 (372-408)||(10795693-10795729)
chr4 (284-337)||(55189583-55189636)
chr4 (226-254)||(229158-229186)
[»] chr5 (62 HSPs)
chr5 (225-413)||(5818925-5819113)
chr5 (226-413)||(19359497-19359684)
chr5 (227-413)||(8647799-8647985)
chr5 (232-413)||(14215244-14215425)
chr5 (223-413)||(18182964-18183154)
chr5 (232-413)||(8461292-8461473)
chr5 (232-413)||(2864757-2864938)
chr5 (227-413)||(24331557-24331745)
chr5 (232-413)||(164194-164374)
chr5 (232-413)||(29454743-29454924)
chr5 (223-390)||(2865140-2865306)
chr5 (232-408)||(15709335-15709510)
chr5 (225-413)||(16018948-16019136)
chr5 (223-413)||(25000450-25000640)
chr5 (218-390)||(5819314-5819485)
chr5 (227-346)||(18183397-18183516)
chr5 (232-390)||(8647441-8647598)
chr5 (232-390)||(29455127-29455284)
chr5 (227-390)||(15372258-15372420)
chr5 (227-390)||(24362221-24362383)
chr5 (232-386)||(19359139-19359292)
chr5 (226-390)||(8460927-8461090)
chr5 (232-407)||(15371874-15372052)
chr5 (227-390)||(14215628-14215790)
chr5 (227-390)||(15708969-15709130)
chr5 (227-390)||(164576-164738)
chr5 (235-413)||(24361843-24362020)
chr5 (227-390)||(14463906-14464067)
chr5 (235-413)||(24325218-24325395)
chr5 (219-355)||(7349436-7349571)
chr5 (232-346)||(4222150-4222264)
chr5 (232-390)||(16018592-16018747)
chr5 (311-391)||(14462686-14462770)
chr5 (232-355)||(7348562-7348685)
chr5 (251-390)||(25000112-25000250)
chr5 (232-346)||(4623151-4623265)
chr5 (317-408)||(10721873-10721963)
chr5 (230-355)||(6019189-6019314)
chr5 (232-390)||(24331945-24332106)
chr5 (232-357)||(6018317-6018441)
chr5 (232-346)||(4219666-4219780)
chr5 (317-408)||(27307148-27307238)
chr5 (170-228)||(22616719-22616777)
chr5 (242-355)||(4624644-4624757)
chr5 (317-407)||(28494931-28495020)
chr5 (334-390)||(27307444-27307499)
chr5 (232-390)||(41834445-41834602)
chr5 (170-228)||(12080498-12080556)
chr5 (175-228)||(33163741-33163794)
chr5 (183-228)||(41417356-41417401)
chr5 (175-215)||(25654588-25654628)
chr5 (226-390)||(28290030-28290193)
chr5 (311-346)||(13814155-13814190)
chr5 (170-217)||(27579263-27579310)
chr5 (322-408)||(16752938-16753022)
chr5 (328-390)||(28495227-28495288)
chr5 (328-390)||(32305916-32305977)
chr5 (167-228)||(10237639-10237700)
chr5 (175-228)||(29766571-29766624)
chr5 (167-228)||(33752469-33752530)
chr5 (334-390)||(14340793-14340849)
chr5 (177-221)||(36055646-36055690)
[»] chr8 (40 HSPs)
chr8 (227-413)||(19176288-19176474)
chr8 (232-413)||(13225000-13225181)
chr8 (232-413)||(9928912-9929093)
chr8 (232-413)||(41681495-41681676)
chr8 (229-413)||(12572212-12572396)
chr8 (232-405)||(31133589-31133762)
chr8 (232-413)||(44831250-44831431)
chr8 (232-413)||(11656818-11656999)
chr8 (232-413)||(33328501-33328682)
chr8 (227-413)||(33742920-33743105)
chr8 (227-388)||(34540934-34541095)
chr8 (226-389)||(41681131-41681292)
chr8 (227-390)||(19176675-19176837)
chr8 (227-390)||(12571861-12572024)
chr8 (226-390)||(31133217-31133380)
chr8 (228-346)||(33328157-33328275)
chr8 (227-355)||(11656453-11656581)
chr8 (227-384)||(4629795-4629952)
chr8 (232-355)||(9930076-9930199)
chr8 (233-390)||(13224645-13224800)
chr8 (227-390)||(44831630-44831792)
chr8 (232-338)||(9178071-9178177)
chr8 (227-337)||(11336959-11337069)
chr8 (321-413)||(9177724-9177816)
chr8 (287-390)||(33743304-33743406)
chr8 (230-390)||(4630177-4630330)
chr8 (227-355)||(10918124-10918252)
chr8 (240-341)||(8073985-8074085)
chr8 (170-228)||(18756431-18756489)
chr8 (167-228)||(28220794-28220855)
chr8 (308-355)||(43958264-43958311)
chr8 (170-228)||(3038631-3038689)
chr8 (175-228)||(23176556-23176609)
chr8 (175-228)||(34686001-34686054)
chr8 (227-390)||(5730815-5730977)
chr8 (176-228)||(7290945-7290997)
chr8 (227-390)||(35427198-35427360)
chr8 (167-228)||(4108676-4108737)
chr8 (226-262)||(9177664-9177700)
chr8 (334-390)||(18805267-18805322)
[»] chr7 (40 HSPs)
chr7 (227-413)||(19590886-19591072)
chr7 (227-413)||(38859002-38859188)
chr7 (226-413)||(32004611-32004798)
chr7 (227-413)||(37787128-37787314)
chr7 (232-413)||(19830781-19830961)
chr7 (242-407)||(29099863-29100028)
chr7 (232-413)||(35288906-35289087)
chr7 (227-406)||(2658837-2659016)
chr7 (226-413)||(34533788-34533975)
chr7 (232-407)||(4641811-4641983)
chr7 (225-390)||(19830416-19830580)
chr7 (227-408)||(23952728-23952910)
chr7 (232-390)||(19590528-19590685)
chr7 (232-390)||(37786770-37786927)
chr7 (219-390)||(34534176-34534346)
chr7 (224-355)||(35289320-35289451)
chr7 (228-390)||(4641439-4641600)
chr7 (228-390)||(29100236-29100397)
chr7 (232-390)||(38858646-38858803)
chr7 (232-390)||(32004999-32005156)
chr7 (227-390)||(2659225-2659387)
chr7 (223-341)||(4478133-4478251)
chr7 (227-345)||(38160949-38161067)
chr7 (235-390)||(23953114-23953268)
chr7 (218-355)||(28583428-28583565)
chr7 (232-355)||(28584341-28584464)
chr7 (328-413)||(4477800-4477885)
chr7 (170-228)||(22955076-22955134)
chr7 (170-228)||(49002450-49002508)
chr7 (175-228)||(7743156-7743209)
chr7 (176-228)||(8133329-8133381)
chr7 (176-228)||(40382115-40382167)
chr7 (232-390)||(9181535-9181692)
chr7 (221-293)||(787267-787340)
chr7 (167-228)||(5781741-5781802)
chr7 (176-228)||(4902546-4902598)
chr7 (170-228)||(4618519-4618577)
chr7 (224-390)||(25637584-25637749)
chr7 (317-390)||(35578986-35579058)
chr7 (317-408)||(9393823-9393913)
[»] chr6 (40 HSPs)
chr6 (227-413)||(22219714-22219900)
chr6 (230-413)||(18504920-18505103)
chr6 (226-413)||(23075489-23075676)
chr6 (227-413)||(11445348-11445534)
chr6 (227-401)||(12935155-12935329)
chr6 (231-390)||(10899941-10900100)
chr6 (219-413)||(18257498-18257692)
chr6 (232-413)||(20741462-20741646)
chr6 (232-413)||(31470318-31470499)
chr6 (227-413)||(2319670-2319855)
chr6 (232-408)||(15827641-15827818)
chr6 (232-392)||(11276593-11276753)
chr6 (226-390)||(18257134-18257297)
chr6 (227-390)||(20741098-20741260)
chr6 (232-390)||(10900315-10900472)
chr6 (232-390)||(11276967-11277124)
chr6 (232-390)||(15828026-15828183)
chr6 (232-390)||(31470701-31470858)
chr6 (230-346)||(2322646-2322762)
chr6 (226-390)||(12935542-12935705)
chr6 (227-346)||(11444985-11445104)
chr6 (227-390)||(28472635-28472796)
chr6 (227-390)||(29859824-29859985)
chr6 (232-413)||(4811618-4811798)
chr6 (232-389)||(18505305-18505461)
chr6 (219-355)||(1149851-1149987)
chr6 (232-326)||(23074002-23074096)
chr6 (232-355)||(29033437-29033560)
chr6 (222-355)||(4811365-4811498)
chr6 (226-317)||(1149462-1149553)
chr6 (228-355)||(3835145-3835272)
chr6 (232-342)||(29035069-29035179)
chr6 (227-346)||(18296143-18296262)
chr6 (322-392)||(35163570-35163639)
chr6 (175-228)||(11083924-11083977)
chr6 (175-226)||(4487825-4487876)
chr6 (170-228)||(4104242-4104300)
chr6 (175-228)||(25441713-25441766)
chr6 (342-409)||(32836114-32836180)
chr6 (297-357)||(33095782-33095842)
[»] chr3 (76 HSPs)
chr3 (232-413)||(37727291-37727472)
chr3 (232-409)||(39555581-39555758)
chr3 (227-413)||(17464489-17464675)
chr3 (232-413)||(31778656-31778837)
chr3 (217-413)||(26837348-26837544)
chr3 (226-413)||(4275725-4275912)
chr3 (227-413)||(22424812-22424998)
chr3 (227-413)||(43973801-43973987)
chr3 (227-408)||(5137347-5137528)
chr3 (232-401)||(20840934-20841103)
chr3 (232-405)||(23644834-23645007)
chr3 (232-405)||(25853237-25853410)
chr3 (232-413)||(27393664-27393845)
chr3 (227-407)||(29801783-29801963)
chr3 (223-413)||(32534953-32535143)
chr3 (232-401)||(30098136-30098305)
chr3 (218-413)||(24300546-24300740)
chr3 (228-406)||(26274566-26274744)
chr3 (228-413)||(41047060-41047243)
chr3 (225-390)||(5136976-5137140)
chr3 (225-390)||(31779037-31779201)
chr3 (232-390)||(39555962-39556119)
chr3 (229-390)||(41046700-41046860)
chr3 (227-390)||(20840558-20840720)
chr3 (235-385)||(48452995-48453144)
chr3 (227-390)||(24300941-24301103)
chr3 (223-390)||(37726923-37727089)
chr3 (223-355)||(23644456-23644588)
chr3 (232-346)||(32535386-32535505)
chr3 (232-390)||(17464876-17465034)
chr3 (227-390)||(26837741-26837902)
chr3 (227-346)||(30104480-30104599)
chr3 (232-355)||(43973444-43973567)
chr3 (233-355)||(22425232-22425354)
chr3 (229-355)||(25612396-25612522)
chr3 (232-390)||(27393962-27394119)
chr3 (232-346)||(29801359-29801473)
chr3 (227-390)||(26274952-26275113)
chr3 (232-390)||(25853612-25853769)
chr3 (223-355)||(23228427-23228558)
chr3 (232-346)||(32697128-32697242)
chr3 (227-355)||(51474753-51474881)
chr3 (232-355)||(50116828-50116951)
chr3 (232-343)||(51473431-51473542)
chr3 (226-340)||(45965935-45966049)
chr3 (218-315)||(37222030-37222127)
chr3 (226-346)||(37220554-37220674)
chr3 (235-326)||(25419150-25419242)
chr3 (232-355)||(25420560-25420683)
chr3 (263-343)||(18010176-18010256)
chr3 (170-228)||(32180515-32180573)
chr3 (175-228)||(19606683-19606736)
chr3 (334-408)||(50900637-50900710)
chr3 (175-228)||(11019704-11019757)
chr3 (175-228)||(44881016-44881069)
chr3 (334-390)||(55192222-55192277)
chr3 (231-390)||(22370598-22370757)
chr3 (223-390)||(55389599-55389765)
chr3 (323-408)||(8873784-8873868)
chr3 (317-402)||(37076048-37076133)
chr3 (170-228)||(45879251-45879309)
chr3 (317-405)||(2323466-2323553)
chr3 (175-228)||(26000758-26000811)
chr3 (317-390)||(27200078-27200150)
chr3 (230-343)||(32695704-32695817)
chr3 (322-390)||(37075781-37075848)
chr3 (292-343)||(23227319-23227370)
chr3 (175-226)||(48154456-48154507)
chr3 (232-390)||(52237203-52237360)
chr3 (328-390)||(37847206-37847267)
chr3 (178-228)||(40640403-40640453)
chr3 (170-228)||(40744203-40744261)
chr3 (328-390)||(43222488-43222550)
chr3 (218-251)||(19794384-19794417)
chr3 (175-228)||(47930436-47930489)
chr3 (232-390)||(51827960-51828117)
[»] scaffold0951 (2 HSPs)
scaffold0951 (227-413)||(2028-2214)
scaffold0951 (226-390)||(1664-1827)
[»] chr2 (57 HSPs)
chr2 (227-413)||(22374686-22374872)
chr2 (232-413)||(18450833-18451014)
chr2 (228-413)||(40027501-40027686)
chr2 (232-413)||(40815348-40815529)
chr2 (218-413)||(11090881-11091076)
chr2 (227-406)||(7446714-7446893)
chr2 (231-409)||(8425357-8425534)
chr2 (227-413)||(43058694-43058879)
chr2 (236-405)||(239721-239890)
chr2 (232-413)||(28616975-28617156)
chr2 (227-390)||(26538463-26538626)
chr2 (232-413)||(3025824-3026003)
chr2 (226-407)||(1978476-1978657)
chr2 (225-390)||(11090517-11090681)
chr2 (232-413)||(14432502-14432683)
chr2 (227-390)||(40815730-40815892)
chr2 (225-355)||(22374316-22374446)
chr2 (227-390)||(239351-239512)
chr2 (219-390)||(1978098-1978268)
chr2 (232-355)||(28616616-28616739)
chr2 (232-390)||(40027143-40027300)
chr2 (232-390)||(43058336-43058493)
chr2 (227-346)||(3025464-3025583)
chr2 (227-390)||(18451216-18451378)
chr2 (232-355)||(20444752-20444875)
chr2 (232-355)||(26538100-26538223)
chr2 (220-347)||(28847122-28847249)
chr2 (229-390)||(14432142-14432302)
chr2 (227-344)||(20440461-20440578)
chr2 (231-390)||(8425745-8425903)
chr2 (232-344)||(35781093-35781205)
chr2 (232-355)||(35779711-35779834)
chr2 (232-346)||(7446345-7446459)
chr2 (232-355)||(8972240-8972363)
chr2 (232-342)||(15551502-15551612)
chr2 (232-346)||(15552482-15552595)
chr2 (167-228)||(41713387-41713448)
chr2 (176-228)||(18947380-18947432)
chr2 (176-228)||(19073578-19073630)
chr2 (227-390)||(28143416-28143577)
chr2 (170-221)||(38249902-38249953)
chr2 (166-228)||(19093680-19093742)
chr2 (175-228)||(17244839-17244892)
chr2 (170-226)||(41644101-41644157)
chr2 (178-225)||(18779179-18779226)
chr2 (167-228)||(6178000-6178061)
chr2 (175-228)||(15651074-15651127)
chr2 (175-228)||(18059131-18059184)
chr2 (223-388)||(31797166-31797329)
chr2 (167-228)||(34441641-34441702)
chr2 (322-390)||(14942230-14942297)
chr2 (170-221)||(39788374-39788425)
chr2 (179-220)||(27138794-27138835)
chr2 (187-228)||(40912471-40912512)
chr2 (232-390)||(4355758-4355915)
chr2 (227-390)||(20128123-20128285)
chr2 (232-390)||(43216095-43216252)
[»] chr1 (49 HSPs)
chr1 (225-413)||(50970274-50970462)
chr1 (232-413)||(17433576-17433757)
chr1 (232-413)||(21856045-21856226)
chr1 (232-413)||(29869980-29870161)
chr1 (237-413)||(33143925-33144101)
chr1 (227-413)||(15646190-15646376)
chr1 (232-413)||(5539819-5540000)
chr1 (232-413)||(8678544-8678725)
chr1 (224-413)||(15173455-15173643)
chr1 (232-413)||(39154381-39154562)
chr1 (232-413)||(4636332-4636513)
chr1 (232-413)||(18984480-18984661)
chr1 (232-390)||(29307326-29307484)
chr1 (232-402)||(26859062-26859232)
chr1 (227-390)||(9019347-9019510)
chr1 (232-390)||(15646580-15646737)
chr1 (232-416)||(5962581-5962765)
chr1 (228-390)||(15173095-15173256)
chr1 (232-390)||(50970663-50970820)
chr1 (226-390)||(18984116-18984279)
chr1 (219-390)||(5540203-5540373)
chr1 (232-390)||(8678927-8679083)
chr1 (232-390)||(29306956-29307113)
chr1 (232-390)||(33144304-33144461)
chr1 (228-390)||(5962963-5963124)
chr1 (232-390)||(29869623-29869780)
chr1 (226-346)||(26859487-26859607)
chr1 (227-355)||(9018971-9019099)
chr1 (284-413)||(17112336-17112465)
chr1 (232-390)||(21856428-21856585)
chr1 (232-390)||(17433219-17433376)
chr1 (232-346)||(39154022-39154136)
chr1 (232-355)||(52268293-52268416)
chr1 (232-345)||(52269177-52269290)
chr1 (227-315)||(2733416-2733504)
chr1 (176-228)||(15964326-15964378)
chr1 (237-329)||(47827033-47827125)
chr1 (289-390)||(4636033-4636132)
chr1 (232-304)||(47826967-47827039)
chr1 (322-390)||(17088243-17088310)
chr1 (227-379)||(45048533-45048683)
chr1 (170-228)||(13876683-13876741)
chr1 (170-228)||(16135549-16135607)
chr1 (169-221)||(3120625-3120677)
chr1 (328-390)||(17088526-17088587)
chr1 (178-228)||(27118556-27118606)
chr1 (183-228)||(16127743-16127788)
chr1 (167-228)||(25943424-25943485)
chr1 (175-228)||(47554981-47555034)
[»] scaffold0417 (2 HSPs)
scaffold0417 (232-409)||(10988-11165)
scaffold0417 (248-390)||(10640-10781)
[»] scaffold0007 (3 HSPs)
scaffold0007 (228-407)||(64672-64851)
scaffold0007 (232-390)||(64305-64462)
scaffold0007 (232-390)||(205754-205910)
[»] scaffold1223 (2 HSPs)
scaffold1223 (232-390)||(1125-1283)
scaffold1223 (232-390)||(756-912)
[»] scaffold0273 (2 HSPs)
scaffold0273 (268-413)||(4242-4387)
scaffold0273 (227-390)||(4592-4754)
[»] scaffold0295 (2 HSPs)
scaffold0295 (232-408)||(5161-5333)
scaffold0295 (227-390)||(4791-4953)
[»] scaffold0157 (2 HSPs)
scaffold0157 (246-413)||(16857-17024)
scaffold0157 (297-390)||(16564-16656)
[»] scaffold0027 (2 HSPs)
scaffold0027 (228-390)||(42168-42330)
scaffold0027 (227-390)||(42544-42705)
[»] scaffold0019 (1 HSPs)
scaffold0019 (227-390)||(134058-134220)
[»] scaffold0432 (2 HSPs)
scaffold0432 (232-389)||(10259-10414)
scaffold0432 (231-413)||(9934-10114)
[»] scaffold0176 (2 HSPs)
scaffold0176 (232-326)||(19069-19163)
scaffold0176 (235-346)||(18841-18952)
[»] scaffold0113 (1 HSPs)
scaffold0113 (233-343)||(28674-28784)
[»] scaffold1585 (1 HSPs)
scaffold1585 (232-354)||(570-692)
[»] scaffold0076 (1 HSPs)
scaffold0076 (229-332)||(8451-8554)
[»] scaffold0057 (2 HSPs)
scaffold0057 (230-355)||(61877-62002)
scaffold0057 (226-303)||(61025-61102)
[»] scaffold0168 (1 HSPs)
scaffold0168 (278-355)||(7707-7784)
[»] scaffold1696 (1 HSPs)
scaffold1696 (233-345)||(454-565)
[»] scaffold0262 (1 HSPs)
scaffold0262 (176-228)||(11443-11495)
[»] scaffold0050 (1 HSPs)
scaffold0050 (175-228)||(5815-5868)
[»] scaffold0200 (1 HSPs)
scaffold0200 (167-228)||(24579-24640)


Alignment Details
Target: chr4 (Bit Score: 383; Significance: 0; HSPs: 67)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 383; E-Value: 0
Query Start/End: Original strand, 8 - 413
Target Start/End: Original strand, 54994848 - 54995253
Alignment:
Q  8 ataagcatctttgaagaatttgtgtgcgctaattaaaatataagtcatatgcaattttctgagtgtattcattactttttcttttcaaacatacccctta 107  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  54994848 ataagcatctttgaagaatttgtgtgcgctaattaaaatataagtcatatgcaattttctgagtgtattcattactttttcttttcaaacatacccctta 54994947  T
Q  108 ttaacagggtttctacagtgcggtcagaaaattaactgacttttttggtaaaattattttgttggtcgaccactctaaaactaatttttaccttattaca 207  Q
    |||||||||||||||| |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| ||||||||    
T  54994948 ttaacagggtttctacggtgcggtcagaaaactaactgacttttttggtaaaattattttgttggtcgaccactctaaaactaacttttactttattaca 54995047  T
Q  208 aatcagtcctcatataaaataggtttaattacacttttggtcctcgtgtattggcctactcacgaaactagtcctacccttttaaaacagaacaaaacgg 307  Q
    |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  54995048 aatcagtcctcatacaaaataggtttaattacacttttggtcctcgtgtattggcctactcacgaaactagtcctacccttttaaaacagaacaaaacgg 54995147  T
Q  308 tccttcaattatcatttttgttgcatttttcgtcctacctcctattttcaaactccagaaatgtagagaaatgacagttttaggcggntttagacctacc 407  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  54995148 tccttcaattatcatttttgttgcatttttcgtcctacctcctattttcaaactccagaaatgtagagaaatgacagttttaggcggttttagacctacc 54995247  T
Q  408 cttatg 413  Q
    ||||||    
T  54995248 cttatg 54995253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 147; E-Value: 2e-77
Query Start/End: Original strand, 232 - 413
Target Start/End: Original strand, 22434182 - 22434363
Alignment:
Q  232 ttaattacacttttggtcctcgtgtattggcctactcacgaaactagtcctacccttttaaaacagaacaaaacggtccttcaattatcatttttgttgc 331  Q
    ||||||||||||||||||||||||| ||||| ||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||     
T  22434182 ttaattacacttttggtcctcgtgttttggcatactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgt 22434281  T
Q  332 atttttcgtcctacctcctattttcaaactccagaaatgtagagaaatgacagttttaggcggntttagacctacccttatg 413  Q
    ||||||||||||||||||||||||||||||||||||| | ||||||||||||||||||||||| ||||||||||||| ||||    
T  22434282 atttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagttttaggcggttttagacctacccctatg 22434363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 143; E-Value: 5e-75
Query Start/End: Original strand, 232 - 413
Target Start/End: Complemental strand, 45082966 - 45082785
Alignment:
Q  232 ttaattacacttttggtcctcgtgtattggcctactcacgaaactagtcctacccttttaaaacagaacaaaacggtccttcaattatcatttttgttgc 331  Q
    ||||||||||||||||||||||||| ||||| ||||||||||||| ||| | ||||||||||||||||||||||||||||||||||||||||||||||||    
T  45082966 ttaattacacttttggtcctcgtgttttggcttactcacgaaactggtcatgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgc 45082867  T
Q  332 atttttcgtcctacctcctattttcaaactccagaaatgtagagaaatgacagttttaggcggntttagacctacccttatg 413  Q
    ||||||||||||||||||||||||||||||| ||||| | ||||||||||||||||||||||| ||||||||||||| ||||    
T  45082866 atttttcgtcctacctcctattttcaaactctagaaacgcagagaaatgacagttttaggcggttttagacctacccctatg 45082785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 141; E-Value: 9e-74
Query Start/End: Original strand, 226 - 413
Target Start/End: Original strand, 15523232 - 15523419
Alignment:
Q  226 ataggtttaattacacttttggtcctcgtgtattggcctactcacgaaactagtcctacccttttaaaacagaacaaaacggtccttcaattatcatttt 325  Q
    ||||| ||||||||||||||||||||||||| ||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||||| |||||    
T  15523232 ataggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattattatttt 15523331  T
Q  326 tgttgcatttttcgtcctacctcctattttcaaactccagaaatgtagagaaatgacagttttaggcggntttagacctacccttatg 413  Q
    | ||||||||||||||||||||||||||||||||||| ||||| | |||||||||||||||||| |||| ||||||||||||| ||||    
T  15523332 ttttgcatttttcgtcctacctcctattttcaaactctagaaacgcagagaaatgacagttttatgcggttttagacctacccctatg 15523419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 140; E-Value: 3e-73
Query Start/End: Original strand, 227 - 413
Target Start/End: Complemental strand, 20471058 - 20470872
Alignment:
Q  227 taggtttaattacacttttggtcctcgtgtattggcctactcacgaaactagtcctacccttttaaaacagaacaaaacggtccttcaattatcattttt 326  Q
    |||| ||||||||||||||||||||||||| |||||||||| |||||||| ||| | |||||||||||||||||||||||||| ||||||||||||||||    
T  20471058 taggcttaattacacttttggtcctcgtgttttggcctacttacgaaactggtcattcccttttaaaacagaacaaaacggtcattcaattatcattttt 20470959  T
Q  327 gttgcatttttcgtcctacctcctattttcaaactccagaaatgtagagaaatgacagttttaggcggntttagacctacccttatg 413  Q
    |||||||||||||||||||||||||||||||||||||||||| | |||||||||| |||||||||||| ||||||||||||| ||||    
T  20470958 gttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgaaagttttaggcggttttagacctacccctatg 20470872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 140; E-Value: 3e-73
Query Start/End: Original strand, 227 - 413
Target Start/End: Complemental strand, 23494990 - 23494804
Alignment:
Q  227 taggtttaattacacttttggtcctcgtgtattggcctactcacgaaactagtcctacccttttaaaacagaacaaaacggtccttcaattatcattttt 326  Q
    |||| ||||||||||||||||||||||||| ||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||    
T  23494990 taggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttt 23494891  T
Q  327 gttgcatttttcgtcctacctcctattttcaaactccagaaatgtagagaaatgacagttttaggcggntttagacctacccttatg 413  Q
    ||||||||||||||||||| ||||||| |||||||||||||| ||| ||||||| || |||||||||| ||||||||||||| ||||    
T  23494890 gttgcatttttcgtcctacatcctattctcaaactccagaaacgtaaagaaatggcaattttaggcggttttagacctacccctatg 23494804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 139; E-Value: 1e-72
Query Start/End: Original strand, 232 - 413
Target Start/End: Complemental strand, 12234871 - 12234690
Alignment:
Q  232 ttaattacacttttggtcctcgtgtattggcctactcacgaaactagtcctacccttttaaaacagaacaaaacggtccttcaattatcatttttgttgc 331  Q
    ||||||| ||||||||||||||||| |||||||||||||||||||  || | ||||||||||||||||||||||||||||||||||||||||||||||||    
T  12234871 ttaattatacttttggtcctcgtgttttggcctactcacgaaactgatcatgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgc 12234772  T
Q  332 atttttcgtcctacctcctattttcaaactccagaaatgtagagaaatgacagttttaggcggntttagacctacccttatg 413  Q
    ||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||||| | ||||||||||||| ||||    
T  12234771 atttttcgtcctacctcctattttcaaaccccagaaatgcagagaaatgacagttttaggcagttttagacctacccctatg 12234690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 139; E-Value: 1e-72
Query Start/End: Original strand, 232 - 413
Target Start/End: Original strand, 25447250 - 25447431
Alignment:
Q  232 ttaattacacttttggtcctcgtgtattggcctactcacgaaactagtcctacccttttaaaacagaacaaaacggtccttcaattatcatttttgttgc 331  Q
    ||||||||||||||||||||||||| |||||||||||| |||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  25447250 ttaattacacttttggtcctcgtgttttggcctactcatgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgc 25447349  T
Q  332 atttttcgtcctacctcctattttcaaactccagaaatgtagagaaatgacagttttaggcggntttagacctacccttatg 413  Q
    ||||||||||||||||||||||||||||||||| ||| | |||||||||||| |||||||| | ||||||||||||| ||||    
T  25447350 atttttcgtcctacctcctattttcaaactccataaacgcagagaaatgacaattttaggcagttttagacctacccatatg 25447431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 139; E-Value: 1e-72
Query Start/End: Original strand, 232 - 413
Target Start/End: Original strand, 46193408 - 46193589
Alignment:
Q  232 ttaattacacttttggtcctcgtgtattggcctactcacgaaactagtcctacccttttaaaacagaacaaaacggtccttcaattatcatttttgttgc 331  Q
    ||||||||||||||||||||||||| ||||||||||||||||| | ||||| ||||||||||||||||||||| ||||||||||||||||||||||||||    
T  46193408 ttaattacacttttggtcctcgtgttttggcctactcacgaaattggtcctgcccttttaaaacagaacaaaaaggtccttcaattatcatttttgttgc 46193507  T
Q  332 atttttcgtcctacctcctattttcaaactccagaaatgtagagaaatgacagttttaggcggntttagacctacccttatg 413  Q
    ||||||||||||||||||||||||||||||||||||| | ||||||||||||||||||| ||| |||||| |||||| ||||    
T  46193508 atttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagttttagacggttttagatctacccctatg 46193589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 134; E-Value: 1e-69
Query Start/End: Original strand, 228 - 408
Target Start/End: Complemental strand, 48526727 - 48526547
Alignment:
Q  228 aggtttaattacacttttggtcctcgtgtattggcctactcacgaaactagtcctacccttttaaaacagaacaaaacggtccttcaattatcatttttg 327  Q
    ||||||||||| ||||||||||||||||| |||| |||||||||||||| ||| | |||||||||||||||||||||||||||||||||||||| |||||    
T  48526727 aggtttaattatacttttggtcctcgtgttttggtctactcacgaaactggtcttgcccttttaaaacagaacaaaacggtccttcaattatcacttttg 48526628  T
Q  328 ttgcatttttcgtcctacctcctattttcaaactccagaaatgtagagaaatgacagttttaggcggntttagacctaccc 408  Q
    ||||||||||||||||||||||||||||||||||||| |||   ||||||||||||||||||||||| |||||||||||||    
T  48526627 ttgcatttttcgtcctacctcctattttcaaactccataaacacagagaaatgacagttttaggcggttttagacctaccc 48526547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 130; E-Value: 3e-67
Query Start/End: Original strand, 217 - 413
Target Start/End: Complemental strand, 51021352 - 51021157
Alignment:
Q  217 tcatataaaataggtttaattacacttttggtcctcgtgtattggcctactcacgaaactagtcctacccttttaaaacagaacaaaacggtccttcaat 316  Q
    ||||| |||||||| ||||||||||||||| ||||||||| ||||||||||||||||| | ||||| ||||||||||||| ||||||||||||||| |||    
T  51021352 tcataaaaaataggcttaattacacttttgatcctcgtgttttggcctactcacgaaattggtcctgcccttttaaaacacaacaaaacggtcctttaat 51021253  T
Q  317 tatcatttttgttgcatttttcgtcctacctcctattttcaaactccagaaatgtagagaaatgacagttttaggcggntttagacctacccttatg 413  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||||| | ||||||||| || |||||||||| ||||||||||||| ||||    
T  51021252 tatca-ttttgttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatggcaattttaggcggttttagacctacccctatg 51021157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 128; E-Value: 5e-66
Query Start/End: Original strand, 227 - 413
Target Start/End: Complemental strand, 4220106 - 4219920
Alignment:
Q  227 taggtttaattacacttttggtcctcgtgtattggcctactcacgaaactagtcctacccttttaaaacagaacaaaacggtccttcaattatcattttt 326  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||||  |||| | ||||||||||||||||||| |||| ||||||||||||||||    
T  4220106 taggtttaattacacttttggtcctcgtgttttggcctactcacgaaactgatcctgctcttttaaaacagaacaaaatggtcattcaattatcattttt 4220007  T
Q  327 gttgcatttttcgtcctacctcctattttcaaactccagaaatgtagagaaatgacagttttaggcggntttagacctacccttatg 413  Q
    ||||||||||||||||||||||||||||||||||| || ||| | |||||||| |||||||||||||| |||||||| |||| ||||    
T  4220006 gttgcatttttcgtcctacctcctattttcaaacttcaaaaacgcagagaaataacagttttaggcggttttagacccacccctatg 4219920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 128; E-Value: 5e-66
Query Start/End: Original strand, 223 - 413
Target Start/End: Original strand, 11153140 - 11153330
Alignment:
Q  223 aaaataggtttaattacacttttggtcctcgtgtattggcctactcacgaaactagtcctacccttttaaaacagaacaaaacggtccttcaattatcat 322  Q
    |||| ||| ||||||| ||||||||||||||||| ||||||||||||| ||| | ||| | ||||||||||| |||| ||||||||||||||||||||||    
T  11153140 aaaaaaggcttaattatacttttggtcctcgtgttttggcctactcacaaaattggtcatgcccttttaaaatagaataaaacggtccttcaattatcat 11153239  T
Q  323 ttttgttgcatttttcgtcctacctcctattttcaaactccagaaatgtagagaaatgacagttttaggcggntttagacctacccttatg 413  Q
    |||||||||||||||||||||||||||||||||||||| ||||||| | ||||||||||||||||||||||| ||||||||||||| ||||    
T  11153240 ttttgttgcatttttcgtcctacctcctattttcaaaccccagaaacgcagagaaatgacagttttaggcggttttagacctacccctatg 11153330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 127; E-Value: 2e-65
Query Start/End: Original strand, 228 - 413
Target Start/End: Original strand, 18751598 - 18751783
Alignment:
Q  228 aggtttaattacacttttggtcctcgtgtattggcctactcacgaaactagtcctacccttttaaaacagaacaaaacggtccttcaattatcatttttg 327  Q
    ||||||||||||||||||||||||||||| ||||||||||||  ||||| ||| | |||||||||||||||||||||||||||||||| |||||||||||    
T  18751598 aggtttaattacacttttggtcctcgtgttttggcctactcataaaactggtcatgcccttttaaaacagaacaaaacggtccttcaaatatcatttttg 18751697  T
Q  328 ttgcatttttcgtcctacctcctattttcaaactccagaaatgtagagaaatgacagttttaggcggntttagacctacccttatg 413  Q
    ||||||||||||||| ||||||||||||||||||||||||| | ||| ||||| ||||||||||||| ||||||| ||||| ||||    
T  18751698 ttgcatttttcgtcccacctcctattttcaaactccagaaacgcagaaaaatggcagttttaggcggttttagacttacccctatg 18751783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 121; E-Value: 7e-62
Query Start/End: Original strand, 232 - 407
Target Start/End: Complemental strand, 25938213 - 25938038
Alignment:
Q  232 ttaattacacttttggtcctcgtgtattggcctactcacgaaactagtcctacccttttaaaacagaacaaaacggtccttcaattatcatttttgttgc 331  Q
    |||||||||||||||||||| |||| ||||||||||||||||| | ||||| |||||||||||||||||||||| |||||||||||||||||||||||||    
T  25938213 ttaattacacttttggtccttgtgttttggcctactcacgaaattggtcctgcccttttaaaacagaacaaaacagtccttcaattatcatttttgttgc 25938114  T
Q  332 atttttcgtcctacctcctattttcaaactccagaaatgtagagaaatgacagttttaggcggntttagacctacc 407  Q
    |||||| ||||||||||||||||||||||||||||||   | ||||||| |||||||| |||| ||||||||||||    
T  25938113 attttttgtcctacctcctattttcaaactccagaaacacaaagaaatggcagttttatgcggttttagacctacc 25938038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 120; E-Value: 3e-61
Query Start/End: Original strand, 232 - 406
Target Start/End: Original strand, 2118296 - 2118470
Alignment:
Q  232 ttaattacacttttggtcctcgtgtattggcctactcacgaaactagtcctacccttttaaaacagaacaaaacggtccttcaattatcatttttgttgc 331  Q
    |||||||||||||||||||| |||| ||||||||||||||||| | ||||| ||||||||||||| |||||||  |||||||||||||||||||||||||    
T  2118296 ttaattacacttttggtccttgtgttttggcctactcacgaaattggtcctgcccttttaaaacataacaaaatagtccttcaattatcatttttgttgc 2118395  T
Q  332 atttttcgtcctacctcctattttcaaactccagaaatgtagagaaatgacagttttaggcggntttagacctac 406  Q
    |||||||||||||||||||||||||||||| |||||| | ||||||||  ||||||||||||| |||||||||||    
T  2118396 atttttcgtcctacctcctattttcaaacttcagaaacgcagagaaattgcagttttaggcggttttagacctac 2118470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 105; E-Value: 3e-52
Query Start/End: Original strand, 246 - 413
Target Start/End: Original strand, 12503453 - 12503620
Alignment:
Q  246 ggtcctcgtgtattggcctactcacgaaactagtcctacccttttaaaacagaacaaaacggtccttcaattatcatttttgttgcatttttcgtcctac 345  Q
    ||||||||||| ||| | |||||||||||||  |||  || ||||||||||||||||||  |||||||||||||||||||||||||||||||||||||||    
T  12503453 ggtcctcgtgttttgacttactcacgaaactgatcccgccattttaaaacagaacaaaattgtccttcaattatcatttttgttgcatttttcgtcctac 12503552  T
Q  346 ctcctattttcaaactccagaaatgtagagaaatgacagttttaggcggntttagacctacccttatg 413  Q
    ||||||||||||||||||||||| | |||||||| |||||||||||||  ||||||||||||| ||||    
T  12503553 ctcctattttcaaactccagaaacgcagagaaattacagttttaggcgattttagacctacccctatg 12503620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 103; E-Value: 4e-51
Query Start/End: Original strand, 232 - 390
Target Start/End: Complemental strand, 46193947 - 46193790
Alignment:
Q  232 ttaattacacttttggtcctcgtgtattggcctactcacgaaactagtcctacccttttaaaacagaacaaaacggtccttcaattatcatttttgttgc 331  Q
    ||||||||||||||||||||||||| ||||||||||||||||| | ||||| ||||||||||||||||||||||||||||||||||||||||||| ||||    
T  46193947 ttaattacacttttggtcctcgtgttttggcctactcacgaaattggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttattgc 46193848  T
Q  332 atttttcgtcctacctcctattttcaaactccagaaatgtagagaaatgacagttttag 390  Q
    ||||||||||||||| || ||||| |  ||||| ||| |||||||| ||||||||||||    
T  46193847 atttttcgtcctaccccccatttt-attctccaaaaacgtagagaattgacagttttag 46193790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 232 - 390
Target Start/End: Original strand, 23494446 - 23494603
Alignment:
Q  232 ttaattacacttttggtcctcgtgtattggcctactcacgaaactagtcctacccttttaaaacagaacaaaacggtccttcaattatcatttttgttgc 331  Q
    ||||||||| ||||||||||||||| ||||||||||||||||||||||||| |||||||||||||||||||| |||||||||||||||||||||| ||||    
T  23494446 ttaattacatttttggtcctcgtgttttggcctactcacgaaactagtcctgcccttttaaaacagaacaaagcggtccttcaattatcatttttattgc 23494545  T
Q  332 atttttcgtcctacctcctattttcaaactccagaaatgtagagaaatgacagttttag 390  Q
    ||||||||||||||| || ||||| |  ||||| | | | |||||||||||||||||||    
T  23494546 atttttcgtcctaccccccatttt-attctccaaacacgcagagaaatgacagttttag 23494603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 232 - 390
Target Start/End: Original strand, 33109687 - 33109844
Alignment:
Q  232 ttaattacacttttggtcctcgtgtattggcctactcacgaaactagtcctacccttttaaaacagaacaaaacggtccttcaattatcatttttgttgc 331  Q
    ||||||||| ||||||||||||||| ||||| ||||||||||||| ||||| | ||||||||||||||||||||||||||||||||||||||||||||||    
T  33109687 ttaattacatttttggtcctcgtgttttggcatactcacgaaactggtcctgctcttttaaaacagaacaaaacggtccttcaattatcatttttgttgc 33109786  T
Q  332 atttttcgtcctacctcctattttcaaactccagaaatgtagagaaatgacagttttag 390  Q
    ||||||||||||||| || ||||| |  ||||| ||| | |||||||||||||||||||    
T  33109787 atttttcgtcctaccccccatttt-attctccaaaaacgcagagaaatgacagttttag 33109844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 225 - 355
Target Start/End: Complemental strand, 33110013 - 33109883
Alignment:
Q  225 aataggtttaattacacttttggtcctcgtgtattggcctactcacgaaactagtcctacccttttaaaacagaacaaaacggtccttcaattatcattt 324  Q
    |||||| ||||||||||||||||||||| ||| ||||||| ||||||||| | ||||| ||||||||||||| |||||||||||||||||||||||||||    
T  33110013 aataggcttaattacacttttggtcctcatgttttggcctgctcacgaaattggtcctgcccttttaaaacataacaaaacggtccttcaattatcattt 33109914  T
Q  325 ttgttgcatttttcgtcctacctcctatttt 355  Q
    |||||||||||||||||||||||||||||||    
T  33109913 ttgttgcatttttcgtcctacctcctatttt 33109883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 96; E-Value: 6e-47
Query Start/End: Original strand, 227 - 346
Target Start/End: Complemental strand, 25447783 - 25447664
Alignment:
Q  227 taggtttaattacacttttggtcctcgtgtattggcctactcacgaaactagtcctacccttttaaaacagaacaaaacggtccttcaattatcattttt 326  Q
    |||| |||||||||||||||||| |||||| ||||||||||||||||||| ||||| |||||||||||||||||||||||||| ||||||||||||||||    
T  25447783 taggcttaattacacttttggtcttcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtctttcaattatcattttt 25447684  T
Q  327 gttgcatttttcgtcctacc 346  Q
    ||||||||||||||||||||    
T  25447683 gttgcatttttcgtcctacc 25447664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 232 - 346
Target Start/End: Complemental strand, 11153689 - 11153575
Alignment:
Q  232 ttaattacacttttggtcctcgtgtattggcctactcacgaaactagtcctacccttttaaaacagaacaaaacggtccttcaattatcatttttgttgc 331  Q
    ||||||||||||||||||||||||| ||||||||||||||||||| ||||| || |||||||||||||||||||| ||||||||||||||||||||||||    
T  11153689 ttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgccattttaaaacagaacaaaacgttccttcaattatcatttttgttgc 11153590  T
Q  332 atttttcgtcctacc 346  Q
    |||||||||||||||    
T  11153589 atttttcgtcctacc 11153575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 227 - 390
Target Start/End: Complemental strand, 22434723 - 22434563
Alignment:
Q  227 taggtttaattacacttttggtcctcgtgtattggcctactcacgaaactagtcctacccttttaaaacagaacaaaacggtccttcaattatcattttt 326  Q
    |||||||||||||| ||||||||||||||| ||||||||||||||||||| ||||| || ||||||| ||||||||||||||| ||||||||||||||||    
T  22434723 taggtttaattacatttttggtcctcgtgttttggcctactcacgaaactggtcctgccattttaaa-cagaacaaaacggtcattcaattatcattttt 22434625  T
Q  327 gttgcatttttcgtcctacctcctattttcaaactccagaaatgtagagaaatgacagttttag 390  Q
    |||||||||||||||||||| || ||||| |  ||||| ||| | |||||||||||||||||||    
T  22434624 gttgcatttttcgtcctacc-cccatttt-attctccaaaaacgcagagaaatgacagttttag 22434563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 227 - 390
Target Start/End: Original strand, 25937668 - 25937830
Alignment:
Q  227 taggtttaattacacttttggtcctcgtgtattggcctactcacgaaactagtcctacccttttaaaacagaacaaaacggtccttcaattatcattttt 326  Q
    |||| ||||||||| ||||||||||||||| || |||||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||    
T  25937668 taggcttaattacatttttggtcctcgtgttttagcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttt 25937767  T
Q  327 gttgcatttttcgtcctacctcctattttcaaactccagaaatgtagagaaatgacagttttag 390  Q
    ||||||||||| |||||  | || ||||| |  ||||| ||| | |||||||||||||||||||    
T  25937768 gttgcattttttgtcctgtcccccatttt-attctccaaaaacgcagagaaatgacagttttag 25937830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 91; E-Value: 6e-44
Query Start/End: Original strand, 227 - 389
Target Start/End: Original strand, 12234327 - 12234488
Alignment:
Q  227 taggtttaattacacttttggtcctcgtgtattggcctactcacgaaactagtcctacccttttaaaacagaacaaaacggtccttcaattatcattttt 326  Q
    |||| ||||||||||||||||||||| ||| ||||| || |||||||||| ||||| |||||||||||||||||||||||||| ||||||||||||||||    
T  12234327 taggcttaattacacttttggtcctcttgttttggcttattcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcattttt 12234426  T
Q  327 gttgcatttttcgtcctacctcctattttcaaactccagaaatgtagagaaatgacagtttta 389  Q
    |||||||||||||||||||| || ||||| |  ||||| ||| | |||||||| |||||||||    
T  12234427 gttgcatttttcgtcctaccccccatttt-attctccaaaaacgcagagaaataacagtttta 12234488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 91; E-Value: 6e-44
Query Start/End: Original strand, 232 - 390
Target Start/End: Complemental strand, 38962361 - 38962204
Alignment:
Q  232 ttaattacacttttggtcctcgtgtattggcctactcacgaaactagtcctacccttttaaaacagaacaaaacggtccttcaattatcatttttgttgc 331  Q
    ||||||||| ||||||||||||||| |||| ||| |||||||||| ||||  ||||||||||||||||||||||||||||||||||||||||||||||||    
T  38962361 ttaattacatttttggtcctcgtgttttggtctattcacgaaactggtccggcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgc 38962262  T
Q  332 atttttcgtcctacctcctattttcaaactccagaaatgtagagaaatgacagttttag 390  Q
    ||||||||||||||| || ||||| |  || || ||| | |||||||||||||||||||    
T  38962261 atttttcgtcctaccccccatttt-attcttcaaaaacgcagagaaatgacagttttag 38962204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 91; E-Value: 6e-44
Query Start/End: Original strand, 232 - 390
Target Start/End: Original strand, 48526199 - 48526355
Alignment:
Q  232 ttaattacacttttggtcctcgtgtattggcctactcacgaaactagtcctacccttttaaaacagaacaaaacggtccttcaattatcatttttgttgc 331  Q
    ||||||||||||||||| ||||||| ||| |||||||| |||||| |  || ||||||||||||||||||||||||||||||||||||||||||||||||    
T  48526199 ttaattacacttttggttctcgtgttttgacctactcatgaaactggctctgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgc 48526298  T
Q  332 atttttcgtcctacctcctattttcaaactccagaaatgtagagaaatgacagttttag 390  Q
    ||||||||||||||| || ||||| |  ||||| ||||| |||||||||||||||||||    
T  48526299 atttttcgtcctacc-cccatttt-attctccaaaaatgcagagaaatgacagttttag 48526355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 232 - 389
Target Start/End: Original strand, 4219560 - 4219716
Alignment:
Q  232 ttaattacacttttggtcctcgtgtattggcctactcacgaaactagtcctacccttttaaaacagaacaaaacggtccttcaattatcatttttgttgc 331  Q
    ||||||||| ||||||||||||||| ||||||||||||||||||| ||||| || |||||||| | |||||||| |||||||||||||||||||||||||    
T  4219560 ttaattacatttttggtcctcgtgttttggcctactcacgaaactggtcctgccattttaaaataaaacaaaacagtccttcaattatcatttttgttgc 4219659  T
Q  332 atttttcgtcctacctcctattttcaaactccagaaatgtagagaaatgacagtttta 389  Q
    ||||||||||||||| || ||||| |  ||||| ||| | ||||||||||||||||||    
T  4219660 atttttcgtcctaccccccatttt-attctccaaaaacgcagagaaatgacagtttta 4219716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 228 - 346
Target Start/End: Complemental strand, 2118841 - 2118723
Alignment:
Q  228 aggtttaattacacttttggtcctcgtgtattggcctactcacgaaactagtcctacccttttaaaacagaacaaaacggtccttcaattatcatttttg 327  Q
    |||||||||||||||||||||| |||||| ||||||| |||| |||||| |||||| |||||||||||| |||||||||||| |||||||||||||||||    
T  2118841 aggtttaattacacttttggtcttcgtgttttggcctgctcatgaaactggtcctatccttttaaaacataacaaaacggtcattcaattatcatttttg 2118742  T
Q  328 ttgcatttttcgtcctacc 346  Q
    |||||||||||||||||||    
T  2118741 ttgcatttttcgtcctacc 2118723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 232 - 390
Target Start/End: Complemental strand, 15523776 - 15523619
Alignment:
Q  232 ttaattacacttttggtcctcgtgtattggcctactcacgaaactagtcctacccttttaaaacagaacaaaacggtccttcaattatcatttttgttgc 331  Q
    |||||||||||||||||| |||||| |||| |||||||||||||| ||||| ||||||||||||| ||||||| |||||||||| |||||||||||||||    
T  15523776 ttaattacacttttggtcatcgtgttttgggctactcacgaaactggtcctgcccttttaaaacaaaacaaaatggtccttcaagtatcatttttgttgc 15523677  T
Q  332 atttttcgtcctacctcctattttcaaactccagaaatgtagagaaatgacagttttag 390  Q
    ||||||||||||||| || ||||| |  ||||| ||| | | |||||||||||||||||    
T  15523676 atttttcgtcctaccccccatttt-attctccaaaaacgcaaagaaatgacagttttag 15523619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 86; E-Value: 6e-41
Query Start/End: Original strand, 217 - 390
Target Start/End: Complemental strand, 22170493 - 22170322
Alignment:
Q  217 tcatataaaataggtttaattacacttttggtcctcgtgtattggcctactcacgaaactagtcctacccttttaaaacagaacaaaacggtccttcaat 316  Q
    |||||| ||| ||| ||||||||||||||||||||||||| ||| |||||| |||||| | ||||| || |||||||||| |||||||||||| ||||||    
T  22170493 tcatattaaaaaggcttaattacacttttggtcctcgtgttttgacctactgacgaaatt-gtcctgcctttttaaaacaaaacaaaacggtcattcaat 22170395  T
Q  317 tatcatttttgttgcatttttcgtcctacctcctattttcaaactccagaaatgtagagaaatgacagttttag 390  Q
    |||||||||||||||||||||||||||||| || ||||| |  ||||| ||| | |||||||||||||||||||    
T  22170394 tatcatttttgttgcatttttcgtcctaccccccatttt-attctccaaaaacgcagagaaatgacagttttag 22170322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 84; E-Value: 9e-40
Query Start/End: Original strand, 227 - 390
Target Start/End: Original strand, 51020795 - 51020957
Alignment:
Q  227 taggtttaattacacttttggtcctcgtgtattggcctactcacgaaactagtcctacccttttaaaacagaacaaaacggtccttcaattatcattttt 326  Q
    |||| ||||||||||||||| ||||| ||| |||||  | |||| ||||| ||||| ||||||||||||||||||||||| |||||||||||||||||||    
T  51020795 taggcttaattacacttttgatcctcatgttttggctaattcactaaactggtcctgcccttttaaaacagaacaaaacgatccttcaattatcattttt 51020894  T
Q  327 gttgcatttttcgtcctacctcctattttcaaactccagaaatgtagagaaatgacagttttag 390  Q
    |||||||||||||||||||| || ||||| |  || || ||| |||||||||||||||||||||    
T  51020895 gttgcatttttcgtcctaccccccatttt-attcttcaaaaacgtagagaaatgacagttttag 51020957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 227 - 344
Target Start/End: Complemental strand, 54995614 - 54995498
Alignment:
Q  227 taggtttaattacacttttggtcctcgtgtattggcctactcacgaaactagtcctacccttttaaaacagaacaaaacggtccttcaattatcattttt 326  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||||  || | ||||||||||| |||||||||||||||||||| ||||| ||||    
T  54995614 taggtttaattacacttttggtcctcgtgttttggcctactcacgaaactgatcatgcccttttaaaatagaacaaaacggtccttcaagtatca-tttt 54995516  T
Q  327 gttgcatttttcgtccta 344  Q
    ||||||||||||||||||    
T  54995515 gttgcatttttcgtccta 54995498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 232 - 343
Target Start/End: Complemental strand, 18764062 - 18763951
Alignment:
Q  232 ttaattacacttttggtcctcgtgtattggcctactcacgaaactagtcctacccttttaaaacagaacaaaacggtccttcaattatcatttttgttgc 331  Q
    ||||||||||||||||||||||||| ||||||||||||||||||| ||| |  |||||||||||||||||||| |||| ||||| |||||||||||||||    
T  18764062 ttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcatgtccttttaaaacagaacaaaatggtcattcaagtatcatttttgttgc 18763963  T
Q  332 atttttcgtcct 343  Q
    ||||||||||||    
T  18763962 atttttcgtcct 18763951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 227 - 346
Target Start/End: Original strand, 45082430 - 45082548
Alignment:
Q  227 taggtttaattacacttttggtcctcgtgtattggcctactcacgaaactagtcctacccttttaaaacagaacaaaacggtccttcaattatcattttt 326  Q
    ||||||||||||| ||||||||| |||||| |||| ||||||||||| || ||  | ||||||||||| |||||||||||||||||||||||||||||||    
T  45082430 taggtttaattacgcttttggtcatcgtgttttggtctactcacgaa-ctggttttgcccttttaaaatagaacaaaacggtccttcaattatcattttt 45082528  T
Q  327 gttgcatttttcgtcctacc 346  Q
    ||||||||||||||||||||    
T  45082529 gttgcatttttcgtcctacc 45082548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 232 - 346
Target Start/End: Complemental strand, 20958401 - 20958288
Alignment:
Q  232 ttaattacacttttggtcctcgtgtattggcctactcacgaaactagtcctacccttttaaaacagaacaaaacggtccttcaattatcatttttgttgc 331  Q
    |||||||||||||| |||||||| | ||||||||||||||||| | ||||| ||||||||||||||||||||   |||||||||||||||||||||||||    
T  20958401 ttaattacacttttagtcctcgtattttggcctactcacgaaaatggtcctgcccttttaaaacagaacaaatatgtccttcaattatcatttttgttgc 20958302  T
Q  332 atttttcgtcctacc 346  Q
    |||||| ||||||||    
T  20958301 attttt-gtcctacc 20958288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 232 - 346
Target Start/End: Complemental strand, 35363143 - 35363028
Alignment:
Q  232 ttaattacacttttggtcctcgtgtattggcctactcacgaaactagtcctacccttttaaaacagaa-caaaacggtccttcaattatcatttttgttg 330  Q
    ||||||||||||||| ||||||||| ||||||||||||||||||| || || | ||||||||| | || |||||||||| ||||||||||||||||||||    
T  35363143 ttaattacacttttgatcctcgtgttttggcctactcacgaaactggttctgctcttttaaaaaaaaaacaaaacggtcattcaattatcatttttgttg 35363044  T
Q  331 catttttcgtcctacc 346  Q
    |||||||||| |||||    
T  35363043 catttttcgttctacc 35363028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 225 - 343
Target Start/End: Complemental strand, 48713895 - 48713777
Alignment:
Q  225 aataggtttaattacacttttggtcctcgtgtattggcctactcacgaaactagtcctacccttttaaaacagaacaaaacggtccttcaattatcattt 324  Q
    |||||||||||||||||||||  | ||||||| || ||||||||| |||| | ||| | | |||||||||||||||||||  ||||||||||||||||||    
T  48713895 aataggtttaattacacttttaattctcgtgttttagcctactcatgaaaatggtcatgctcttttaaaacagaacaaaattgtccttcaattatcattt 48713796  T
Q  325 ttgttgcatttttcgtcct 343  Q
    |||||||||||||||||||    
T  48713795 ttgttgcatttttcgtcct 48713777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 228 - 355
Target Start/End: Original strand, 16690935 - 16691062
Alignment:
Q  228 aggtttaattacacttttggtcctcgtgtattggcctactcacgaaactagtcctacccttttaaaacagaacaaaacggtccttcaattatcatttttg 327  Q
    ||||||||||||| |||||||||| |||| |||  |||||||||||| | ||||| ||  ||||||||| |||||||   ||||||||||||||||||||    
T  16690935 aggtttaattacatttttggtccttgtgttttgatctactcacgaaaatggtcctgcctctttaaaacaaaacaaaattatccttcaattatcatttttg 16691034  T
Q  328 ttgcatttttcgtcctacctcctatttt 355  Q
    ||||||||||||||||||| || |||||    
T  16691035 ttgcatttttcgtcctacccccgatttt 16691062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 247 - 346
Target Start/End: Complemental strand, 43243807 - 43243708
Alignment:
Q  247 gtcctcgtgtattggcctactcacgaaactagtcctacccttttaaaacagaacaaaacggtccttcaattatcatttttgttgcatttttcgtcctacc 346  Q
    |||||||||| ||||||||||||||||| | ||| | |||||||||||||||||||||  || |||||||||||||||||||||||||||| ||||||||    
T  43243807 gtcctcgtgttttggcctactcacgaaaatggtcatgcccttttaaaacagaacaaaattgttcttcaattatcatttttgttgcattttttgtcctacc 43243708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 232 - 346
Target Start/End: Complemental strand, 44892690 - 44892576
Alignment:
Q  232 ttaattacacttttggtcctcgtgtattggcctactcacgaaactagtcctacccttttaaaacagaacaaaacggtccttcaattatcatttttgttgc 331  Q
    ||||||| | ||||||||||||||| ||| ||||||||||||| | || || || ||||||||||||||||||| ||| |||||||||  ||||||||||    
T  44892690 ttaattatatttttggtcctcgtgttttgacctactcacgaaaatggttctgccattttaaaacagaacaaaactgtctttcaattatattttttgttgc 44892591  T
Q  332 atttttcgtcctacc 346  Q
    |||||||||||||||    
T  44892590 atttttcgtcctacc 44892576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 225 - 335
Target Start/End: Original strand, 48708291 - 48708401
Alignment:
Q  225 aataggtttaattacacttttggtcctcgtgtattggcctactcacgaaactagtcctacccttttaaaacagaacaaaacggtccttcaattatcattt 324  Q
    |||||| |||||||||||||||||||  |||| ||||||||  ||||||| |  |||| ||||||||||||| |||||||| ||||||||||||||||||    
T  48708291 aataggcttaattacacttttggtccatgtgttttggcctaaccacgaaaatgatcctgcccttttaaaacacaacaaaactgtccttcaattatcattt 48708390  T
Q  325 ttgttgcattt 335  Q
    |||||||||||    
T  48708391 ttgttgcattt 48708401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 232 - 357
Target Start/End: Complemental strand, 10258429 - 10258304
Alignment:
Q  232 ttaattacacttttggtcctcgtgtattggcctactcacgaaactagtcctacccttttaaaacagaacaaaacggtccttcaattatcatttttgttgc 331  Q
    |||||||||||||||||||||||||  ||||||||||| |||| | ||||| |||||||||||||||  ||||  ||  |||||||||||||||||||||    
T  10258429 ttaattacacttttggtcctcgtgttgtggcctactcaggaaattggtcctgcccttttaaaacagattaaaattgtttttcaattatcatttttgttgc 10258330  T
Q  332 atttttcgtcctacctcctattttca 357  Q
    | |||| ||| |||| ||||||||||    
T  10258329 agttttagtcttaccccctattttca 10258304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 236 - 341
Target Start/End: Original strand, 20957196 - 20957301
Alignment:
Q  236 ttacacttttggtcctcgtgtattggcctactcacgaaactagtcctacccttttaaaacagaacaaaacggtccttcaattatcatttttgttgcattt 335  Q
    ||||| |||||||||||| || ||||| ||||||||||| | ||| ||| ||||||||||| |||||||  ||||||||||||||| |||||||||||||    
T  20957196 ttacatttttggtcctcgagttttggcttactcacgaaaatggtcatactcttttaaaacacaacaaaattgtccttcaattatcaattttgttgcattt 20957295  T
Q  336 ttcgtc 341  Q
    ||||||    
T  20957296 ttcgtc 20957301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 282 - 355
Target Start/End: Original strand, 43242323 - 43242396
Alignment:
Q  282 tacccttttaaaacagaacaaaacggtccttcaattatcatttttgttgcatttttcgtcctacctcctatttt 355  Q
    |||| ||||||||||||||||||||||| |||||||||||||||| |||||||||||||||||||||| |||||    
T  43242323 tacctttttaaaacagaacaaaacggtcattcaattatcattttttttgcatttttcgtcctacctccaatttt 43242396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 226 - 343
Target Start/End: Original strand, 48293591 - 48293708
Alignment:
Q  226 ataggtttaattacacttttggtcctcgtgtattggcctactcacgaaactagtcctacccttttaaaacagaacaaaacggtccttcaattatcatttt 325  Q
    ||||| ||||||||||||||||||||||||| ||||| ||||||||||| |  ||||  |  ||||||||| |||||||  || ||||||||||||||||    
T  48293591 ataggcttaattacacttttggtcctcgtgttttggcttactcacgaaattgatcctgtctctttaaaacaaaacaaaattgttcttcaattatcatttt 48293690  T
Q  326 tgttgcatttttcgtcct 343  Q
    ||||||||||||| ||||    
T  48293691 tgttgcatttttcatcct 48293708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 247 - 355
Target Start/End: Complemental strand, 43281317 - 43281210
Alignment:
Q  247 gtcctcgtgtattggcctactcacgaaactagtcctacccttttaaaacagaacaaaacggtccttcaattatcatttttgttgcatttttcgtcctacc 346  Q
    |||||||||| ||||||||||||||||| | ||| | || ||||||||||||||||||  || |||||||||| ||||||||||||||||||||||||||    
T  43281317 gtcctcgtgttttggcctactcacgaaaatggtcatgccattttaaaacagaacaaaaatgttcttcaattat-atttttgttgcatttttcgtcctacc 43281219  T
Q  347 tcctatttt 355  Q
     || |||||    
T  43281218 ccccatttt 43281210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 297 - 390
Target Start/End: Complemental strand, 12503913 - 12503821
Alignment:
Q  297 gaacaaaacggtccttcaattatcatttttgttgcatttttcgtcctacctcctattttcaaactccagaaatgtagagaaatgacagttttag 390  Q
    ||||||||||||||||||| ||||||||||||||||||||||||| |||| || ||||| |  ||||| ||| | |||||||||||||||||||    
T  12503913 gaacaaaacggtccttcaagtatcatttttgttgcatttttcgtcataccccccatttt-attctccaaaaacgcagagaaatgacagttttag 12503821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 232 - 355
Target Start/End: Complemental strand, 48295085 - 48294961
Alignment:
Q  232 ttaattacacttttggtcctcgtgtattggcctactcacgaaactagtcctacccttttaaaacagaacaaaacggtccttcaattatcatttttgttgc 331  Q
    ||||||||| |||||||| |||||| |||  |||||||||||| | ||| | ||  ||||||||| |||||||  ||| |||||||||||||||||||||    
T  48295085 ttaattacatttttggtcatcgtgttttgatctactcacgaaattggtcttgcctctttaaaacacaacaaaattgtcattcaattatcatttttgttgc 48294986  T
Q  332 attttt-cgtcctacctcctatttt 355  Q
    |||||| ||||||||| || |||||    
T  48294985 atttttccgtcctaccccccatttt 48294961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 232 - 299
Target Start/End: Complemental strand, 16318318 - 16318251
Alignment:
Q  232 ttaattacacttttggtcctcgtgtattggcctactcacgaaactagtcctacccttttaaaacagaa 299  Q
    ||||||||||||||||||||||||| ||||||||||||| |||||  |||| ||||||||||||||||    
T  16318318 ttaattacacttttggtcctcgtgttttggcctactcacaaaactgatcctgcccttttaaaacagaa 16318251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 232 - 355
Target Start/End: Complemental strand, 16691613 - 16691491
Alignment:
Q  232 ttaattacacttttggtcctcgtgtattggcctactcacgaaactagtcctacccttttaaaacagaacaaaacggtccttcaattatcatttttgttgc 331  Q
    ||||||||||||||| |||  |||| ||| ||||||||||||| | ||||| ||  |||||| || |||||||  |||||| |||||| |||||||||||    
T  16691613 ttaattacacttttgatccctgtgttttgacctactcacgaaaatggtcctgcctctttaaa-cataacaaaattgtcctttaattattatttttgttgc 16691515  T
Q  332 atttttcgtcctacctcctatttt 355  Q
    |||||||||| ||||||| |||||    
T  16691514 atttttcgtcatacctcccatttt 16691491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 232 - 355
Target Start/End: Original strand, 44890520 - 44890643
Alignment:
Q  232 ttaattacacttttggtcctcgtgtattggcctactcacgaaactagtcctacccttttaaaacagaacaaaacggtccttcaattatcatttttgttgc 331  Q
    ||||||||| |||||||||| |||| ||| |||| |||||||| | ||| | |||||||||||||||||||||   ||||| ||||||  ||||||||||    
T  44890520 ttaattacaattttggtccttgtgttttgacctattcacgaaaatggtcatgcccttttaaaacagaacaaaaatatcctttaattatattttttgttgc 44890619  T
Q  332 atttttcgtcctacctcctatttt 355  Q
    ||||||| || |||| || |||||    
T  44890620 atttttcatcataccccccatttt 44890643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 317 - 390
Target Start/End: Original strand, 17504061 - 17504133
Alignment:
Q  317 tatcatttttgttgcatttttcgtcctacctcctattttcaaactccagaaatgtagagaaatgacagttttag 390  Q
    |||||| ||| ||||| |||| |||||||||||||||||||| ||||||||| |||||||||||||||||||||    
T  17504061 tatcatgttttttgcagttttagtcctacctcctattttcaa-ctccagaaacgtagagaaatgacagttttag 17504133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 167 - 228
Target Start/End: Complemental strand, 17612621 - 17612560
Alignment:
Q  167 tgttggtcgaccactctaaaactaatttttaccttattacaaatcagtcctcatataaaata 228  Q
    ||||||| ||||||||||||||||| |||||||||||||||||| |||||||||| ||||||    
T  17612621 tgttggtggaccactctaaaactaaattttaccttattacaaattagtcctcatagaaaata 17612560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 229 - 402
Target Start/End: Complemental strand, 40160636 - 40160465
Alignment:
Q  229 ggtttaattacacttttggtcctcgtgtattggcctactcacgaaactagtcctacccttttaaaacagaacaaaacggtccttcaattatcatttttgt 328  Q
    |||||||||||| |||||||||| |  | ||| || |||||||||| ||||| | ||  ||| |||  ||||||||| |||||  || |||||| ||| |    
T  40160636 ggtttaattacatttttggtccttgcattttgaccaactcacgaaaatagtcatgcctctttcaaattgaacaaaaccgtccta-aactatcatgttttt 40160538  T
Q  329 tgcatttttcgtcctacctcctattttcaaactccagaaatgtagagaaatgacagttttaggcggntttagac 402  Q
    |||| |||| ||| |||||||||||||||| ||||||||| |||||||||   ||||||||||| | |||||||    
T  40160537 tgcagttttagtcttacctcctattttcaa-ctccagaaacgtagagaaaatgcagttttaggcagttttagac 40160465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 167 - 229
Target Start/End: Complemental strand, 2708159 - 2708097
Alignment:
Q  167 tgttggtcgaccactctaaaactaatttttaccttattacaaatcagtcctcatataaaatag 229  Q
    ||||||| |||||||||||||||||  |||| ||||||||||||||| ||||||| |||||||    
T  2708159 tgttggtggaccactctaaaactaagctttatcttattacaaatcagccctcatacaaaatag 2708097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 290 - 346
Target Start/End: Complemental strand, 44220861 - 44220805
Alignment:
Q  290 taaaacagaacaaaacggtccttcaattatcatttttgttgcatttttcgtcctacc 346  Q
    |||||||||||||||  |||||||| |||||||||||||| |||||||||| |||||    
T  44220861 taaaacagaacaaaattgtccttcatttatcatttttgtttcatttttcgttctacc 44220805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 170 - 228
Target Start/End: Complemental strand, 2570762 - 2570704
Alignment:
Q  170 tggtcgaccactctaaaactaatttttaccttattacaaatcagtcctcatataaaata 228  Q
    |||| |||||||||||||||||  ||||||||||||||||||| |||||| | ||||||    
T  2570762 tggtggaccactctaaaactaaactttaccttattacaaatcattcctcaaacaaaata 2570704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 178 - 228
Target Start/End: Complemental strand, 9743866 - 9743816
Alignment:
Q  178 cactctaaaactaatttttaccttattacaaatcagtcctcatataaaata 228  Q
    |||||||||||||| |||||| |||||||||| ||||||||||| ||||||    
T  9743866 cactctaaaactaaattttacattattacaaaccagtcctcatacaaaata 9743816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 297 - 390
Target Start/End: Complemental strand, 17504437 - 17504345
Alignment:
Q  297 gaacaaaacggtccttcaattatcatttttgttgcatttttcgtcctacctcctattttcaaactccagaaatgtagagaaatgacagttttag 390  Q
    ||||||||| |||||| || ||| || ||| ||||| |||| || ||||||||||||||  ||||| ||||| | |||||||||||||||||||    
T  17504437 gaacaaaaccgtccttaaactat-atgttttttgcaattttagtactacctcctatttttcaactctagaaacgcagagaaatgacagttttag 17504345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 175 - 221
Target Start/End: Complemental strand, 1012566 - 1012520
Alignment:
Q  175 gaccactctaaaactaatttttaccttattacaaatcagtcctcata 221  Q
    ||||| ||||||||||| |||||||||||||||||||| || |||||    
T  1012566 gaccattctaaaactaaattttaccttattacaaatcaatcttcata 1012520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 328 - 390
Target Start/End: Original strand, 35193406 - 35193467
Alignment:
Q  328 ttgcatttttcgtcctacctcctattttcaaactccagaaatgtagagaaatgacagttttag 390  Q
    ||||| |||| |||||| ||||||||||||| || |||||| | |||||||||||||||||||    
T  35193406 ttgcagttttagtcctatctcctattttcaa-cttcagaaacgcagagaaatgacagttttag 35193467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 175 - 228
Target Start/End: Original strand, 5915039 - 5915092
Alignment:
Q  175 gaccactctaaaactaatttttaccttattacaaatcagtcctcatataaaata 228  Q
    ||||||| ||| ||||| |||||| ||||||||||| |||||||||| ||||||    
T  5915039 gaccactgtaacactaaattttactttattacaaattagtcctcataaaaaata 5915092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 372 - 408
Target Start/End: Complemental strand, 10795729 - 10795693
Alignment:
Q  372 agagaaatgacagttttaggcggntttagacctaccc 408  Q
    ||||||||||||||||||||| | |||||||||||||    
T  10795729 agagaaatgacagttttaggcagttttagacctaccc 10795693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 284 - 337
Target Start/End: Original strand, 55189583 - 55189636
Alignment:
Q  284 cccttttaaaacagaacaaaacggtccttcaattatcatttttgttgcattttt 337  Q
    ||||||||||| |||||||||  ||| ||||||||||||||||| | |||||||    
T  55189583 cccttttaaaatagaacaaaattgtctttcaattatcatttttgctacattttt 55189636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 226 - 254
Target Start/End: Original strand, 229158 - 229186
Alignment:
Q  226 ataggtttaattacacttttggtcctcgt 254  Q
    |||||||||||||||||||||||||||||    
T  229158 ataggtttaattacacttttggtcctcgt 229186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 154; Significance: 1e-81; HSPs: 62)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 154; E-Value: 1e-81
Query Start/End: Original strand, 225 - 413
Target Start/End: Original strand, 5818925 - 5819113
Alignment:
Q  225 aataggtttaattacacttttggtcctcgtgtattggcctactcacgaaactagtcctacccttttaaaacagaacaaaacggtccttcaattatcattt 324  Q
    |||||||||||||||||||||||||||||||| ||||||||||||||||||| ||||| |||||||||||||||||||||||||| ||||||||||||||    
T  5818925 aataggtttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtctttcaattatcattt 5819024  T
Q  325 ttgttgcatttttcgtcctacctcctattttcaaactccagaaatgtagagaaatgacagttttaggcggntttagacctacccttatg 413  Q
    ||||||||||||||||| |||||||||||||||||||||||||| | ||||||||||||||||||||||| ||||||||||||| ||||    
T  5819025 ttgttgcatttttcgtcttacctcctattttcaaactccagaaacgcagagaaatgacagttttaggcggttttagacctacccctatg 5819113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 153; E-Value: 6e-81
Query Start/End: Original strand, 226 - 413
Target Start/End: Complemental strand, 19359684 - 19359497
Alignment:
Q  226 ataggtttaattacacttttggtcctcgtgtattggcctactcacgaaactagtcctacccttttaaaacagaacaaaacggtccttcaattatcatttt 325  Q
    ||||| ||||||||||||||||||||||||| ||||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||    
T  19359684 ataggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttt 19359585  T
Q  326 tgttgcatttttcgtcctacctcctattttcaaactccagaaatgtagagaaatgacagttttaggcggntttagacctacccttatg 413  Q
    ||||| ||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||| ||||||||||||| ||||    
T  19359584 tgttggatttttcgtcctacctcctattttcaaactccagaaacgtagagaaatggcagttttaggcggttttagacctacccctatg 19359497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 140; E-Value: 3e-73
Query Start/End: Original strand, 227 - 413
Target Start/End: Complemental strand, 8647985 - 8647799
Alignment:
Q  227 taggtttaattacacttttggtcctcgtgtattggcctactcacgaaactagtcctacccttttaaaacagaacaaaacggtccttcaattatcattttt 326  Q
    |||| ||||||||||||||||||||||||| |||||||||||||||||||  |||| |||||||||||||||||||||||||||||||||||||||||||    
T  8647985 taggcttaattacacttttggtcctcgtgttttggcctactcacgaaactgatcctgcccttttaaaacagaacaaaacggtccttcaattatcattttt 8647886  T
Q  327 gttgcatttttcgtcctacctcctattttcaaactccagaaatgtagagaaatgacagttttaggcggntttagacctacccttatg 413  Q
    ||||||||||||||| ||||| |||||||||||||||| ||| | ||||||||||||||||||||||| ||||||||||||| ||||    
T  8647885 gttgcatttttcgtcataccttctattttcaaactccataaacgcagagaaatgacagttttaggcggttttagacctacccctatg 8647799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 139; E-Value: 1e-72
Query Start/End: Original strand, 232 - 413
Target Start/End: Original strand, 14215244 - 14215425
Alignment:
Q  232 ttaattacacttttggtcctcgtgtattggcctactcacgaaactagtcctacccttttaaaacagaacaaaacggtccttcaattatcatttttgttgc 331  Q
    ||||||||||||||||||||||||| ||||| ||||||||||||| ||  ||||||||||||||||||||||| ||||||||| ||||||||||||||||    
T  14215244 ttaattacacttttggtcctcgtgttttggcttactcacgaaactggttatacccttttaaaacagaacaaaaaggtccttcagttatcatttttgttgc 14215343  T
Q  332 atttttcgtcctacctcctattttcaaactccagaaatgtagagaaatgacagttttaggcggntttagacctacccttatg 413  Q
    ||||||||||||||||||||||||||||||||||||| | ||||||||||||||||||||||| ||||||||||||| ||||    
T  14215344 atttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagttttaggcggttttagacctacccctatg 14215425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 136; E-Value: 8e-71
Query Start/End: Original strand, 223 - 413
Target Start/End: Original strand, 18182964 - 18183154
Alignment:
Q  223 aaaataggtttaattacacttttggtcctcgtgtattggcctactcacgaaactagtcctacccttttaaaacagaacaaaacggtccttcaattatcat 322  Q
    ||||||||||||||||||||||||||| |||||| ||||||||||||||||||| ||| | |||||||||||||||||||||||||||||||||||||||    
T  18182964 aaaataggtttaattacacttttggtcatcgtgttttggcctactcacgaaactggtcatgcccttttaaaacagaacaaaacggtccttcaattatcat 18183063  T
Q  323 ttttgttgcatttttcgtcctacctcctattttcaaactccagaaatgtagagaaatgacagttttaggcggntttagacctacccttatg 413  Q
    ||||||||||||||||||||||||||||||||| | || ||||||| | ||||||||||||||||||||| | ||||| ||||||| ||||    
T  18183064 ttttgttgcatttttcgtcctacctcctatttttataccccagaaacgcagagaaatgacagttttaggcagttttaggcctacccctatg 18183154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 135; E-Value: 3e-70
Query Start/End: Original strand, 232 - 413
Target Start/End: Complemental strand, 8461473 - 8461292
Alignment:
Q  232 ttaattacacttttggtcctcgtgtattggcctactcacgaaactagtcctacccttttaaaacagaacaaaacggtccttcaattatcatttttgttgc 331  Q
    ||||||||||||||||||||||||| |||||||||||||||||||  |||| | |||||||||||||||||||||||||||||||||||||||||| |||    
T  8461473 ttaattacacttttggtcctcgtgttttggcctactcacgaaactgttcctgctcttttaaaacagaacaaaacggtccttcaattatcatttttgctgc 8461374  T
Q  332 atttttcgtcctacctcctattttcaaactccagaaatgtagagaaatgacagttttaggcggntttagacctacccttatg 413  Q
    |||||||||| |||||||||||||||||||||||||| | |||||||||||| |||||||||| ||||||||||||| ||||    
T  8461373 atttttcgtcatacctcctattttcaaactccagaaacgcagagaaatgacaattttaggcggttttagacctacccctatg 8461292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 127; E-Value: 2e-65
Query Start/End: Original strand, 232 - 413
Target Start/End: Original strand, 2864757 - 2864938
Alignment:
Q  232 ttaattacacttttggtcctcgtgtattggcctactcacgaaactagtcctacccttttaaaacagaacaaaacggtccttcaattatcatttttgttgc 331  Q
    |||||||||||||||||||| |||| ||||||||||||||||| |  || | ||||||||||||| ||||||||||||||||||||||||||||||||||    
T  2864757 ttaattacacttttggtccttgtgttttggcctactcacgaaattgatcatgcccttttaaaacataacaaaacggtccttcaattatcatttttgttgc 2864856  T
Q  332 atttttcgtcctacctcctattttcaaactccagaaatgtagagaaatgacagttttaggcggntttagacctacccttatg 413  Q
    ||||||||||||||||||||||||||||||||| ||| | ||||||||||||||||||||||| |||||| |||||| ||||    
T  2864857 atttttcgtcctacctcctattttcaaactccataaacgcagagaaatgacagttttaggcggttttagaactacccctatg 2864938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 127; E-Value: 2e-65
Query Start/End: Original strand, 227 - 413
Target Start/End: Original strand, 24331557 - 24331745
Alignment:
Q  227 taggtttaattacacttttggtcctcgtgtattggcctactcacgaaactagtcctacccttttaaaacagaacaaaacggtccttcaattatc--attt 324  Q
    |||| ||||||||||||||||||||||||| |||  |||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||   |||    
T  24331557 taggcttaattacacttttggtcctcgtgttttgatctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatctatttt 24331656  T
Q  325 ttgttgcatttttcgtcctacctcctattttcaaactccagaaatgtagagaaatgacagttttaggcggntttagacctacccttatg 413  Q
    |||||||||||||| ||||| ||||||||||||||||||||||| | ||||||||||||||||||||||| ||||||||||||| ||||    
T  24331657 ttgttgcatttttcatcctagctcctattttcaaactccagaaacgcagagaaatgacagttttaggcggttttagacctacccctatg 24331745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 123; E-Value: 5e-63
Query Start/End: Original strand, 232 - 413
Target Start/End: Original strand, 164194 - 164374
Alignment:
Q  232 ttaattacacttttggtcctcgtgtattggcctactcacgaaactagtcctacccttttaaaacagaacaaaacggtccttcaattatcatttttgttgc 331  Q
    ||||||||||||||||||||||||| ||| ||||||||||||||| ||||| |||||||| |||| |||||||||||| ||||||||||||||| |||||    
T  164194 ttaattacacttttggtcctcgtgttttgacctactcacgaaactggtcctgcccttttataacaaaacaaaacggtcattcaattatcatttt-gttgc 164292  T
Q  332 atttttcgtcctacctcctattttcaaactccagaaatgtagagaaatgacagttttaggcggntttagacctacccttatg 413  Q
    ||||||||||||||||||||||||||||||||||||| | |||||||||||| ||||| |||| ||||||||||||| ||||    
T  164293 atttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacaattttatgcggttttagacctacccctatg 164374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 123; E-Value: 5e-63
Query Start/End: Original strand, 232 - 413
Target Start/End: Original strand, 29454743 - 29454924
Alignment:
Q  232 ttaattacacttttggtcctcgtgtattggcctactcacgaaactagtcctacccttttaaaacagaacaaaacggtccttcaattatcatttttgttgc 331  Q
    |||||| ||||||||||| | |||| ||||||||||||||||| | ||| | ||||||||||||||||||||||||||||| |||||||||||||| |||    
T  29454743 ttaatttcacttttggtcattgtgttttggcctactcacgaaattggtcatgcccttttaaaacagaacaaaacggtccttgaattatcatttttgctgc 29454842  T
Q  332 atttttcgtcctacctcctattttcaaactccagaaatgtagagaaatgacagttttaggcggntttagacctacccttatg 413  Q
    ||||||||||||||||||||||||||||||||||||| | |||||||||| |||||||||||| ||||||||||||| ||||    
T  29454843 atttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgatagttttaggcggttttagacctacccatatg 29454924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 116; E-Value: 7e-59
Query Start/End: Original strand, 223 - 390
Target Start/End: Complemental strand, 2865306 - 2865140
Alignment:
Q  223 aaaataggtttaattacacttttggtcctcgtgtattggcctactcacgaaactagtcctacccttttaaaacagaacaaaacggtccttcaattatcat 322  Q
    |||||||| ||||||||||||||||||||||||| ||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||    
T  2865306 aaaataggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcat 2865207  T
Q  323 ttttgttgcatttttcgtcctacctcctattttcaaactccagaaatgtagagaaatgacagttttag 390  Q
    ||||||| |||||||||||||||| || ||||| |  ||||| ||| |||||||||||||||||||||    
T  2865206 ttttgtttcatttttcgtcctaccccccatttt-attctccaaaaacgtagagaaatgacagttttag 2865140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 114; E-Value: 1e-57
Query Start/End: Original strand, 232 - 408
Target Start/End: Complemental strand, 15709510 - 15709335
Alignment:
Q  232 ttaattacacttttggtcctcgtgtattggcctactcacgaaactagtcctacccttttaaaacagaacaaaacggtccttcaattatcatttttgttgc 331  Q
    |||||||||||||||||| | |||| |||||||||||| |||||||||| | |||||| |||||||||||||||||||||| | ||||||||| ||||||    
T  15709510 ttaattacacttttggtcattgtgttttggcctactcatgaaactagtcatgcccttt-aaaacagaacaaaacggtcctttagttatcatttctgttgc 15709412  T
Q  332 atttttcgtcctacctcctattttcaaactccagaaatgtagagaaatgacagttttaggcggntttagacctaccc 408  Q
    ||||||||||||||||||||||||||||||||| ||  | ||||||||||||||||||||||| |||||||||||||    
T  15709411 atttttcgtcctacctcctattttcaaactccataagcgcagagaaatgacagttttaggcggttttagacctaccc 15709335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 114; E-Value: 1e-57
Query Start/End: Original strand, 225 - 413
Target Start/End: Complemental strand, 16019136 - 16018948
Alignment:
Q  225 aataggtttaattacacttttggtcctcgtgtattggcctactcacgaaactagtcctacccttttaaaacagaacaaaacggtccttcaattatcattt 324  Q
    |||||||||||||||||||||||||||| ||| ||||| ||||||||||| | ||||| | ||||||||| |||| |||| ||| |||||||||||||||    
T  16019136 aataggtttaattacacttttggtcctcatgttttggcatactcacgaaattggtcctgctcttttaaaatagaataaaatggttcttcaattatcattt 16019037  T
Q  325 ttgttgcatttttcgtcctacctcctattttcaaactccagaaatgtagagaaatgacagttttaggcggntttagacctacccttatg 413  Q
    |||||| |||||||||||||||||||||||| |||||||||||| | ||||||||||||||||||| ||| |||||| |||||| ||||    
T  16019036 ttgttgtatttttcgtcctacctcctatttttaaactccagaaacgcagagaaatgacagttttagacggttttagatctacccctatg 16018948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 108; E-Value: 4e-54
Query Start/End: Original strand, 223 - 413
Target Start/End: Complemental strand, 25000640 - 25000450
Alignment:
Q  223 aaaataggtttaattacacttttggtcctcgtgtattggcctactcacgaaactagtcctacccttttaaaacagaacaaaacggtccttcaattatcat 322  Q
    |||| ||| |||||||||||||||||| || ||| ||||||||||||||||| | ||| |   ||||||||||||||||||| |||| ||||||||||||    
T  25000640 aaaaaaggcttaattacacttttggtcttcatgttttggcctactcacgaaattggtcatgttcttttaaaacagaacaaaatggtcattcaattatcat 25000541  T
Q  323 ttttgttgcatttttcgtcctacctcctattttcaaactccagaaatgtagagaaatgacagttttaggcggntttagacctacccttatg 413  Q
    |||||||||||||||||||| ||||||||||||||||||||| ||| | ||||||||||||||||||| ||| |||||| |||||| ||||    
T  25000540 ttttgttgcatttttcgtcccacctcctattttcaaactccaaaaacgcagagaaatgacagttttagacggttttagatctacccctatg 25000450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 105; E-Value: 3e-52
Query Start/End: Original strand, 218 - 390
Target Start/End: Complemental strand, 5819485 - 5819314
Alignment:
Q  218 catataaaataggtttaattacacttttggtcctcgtgtattggcctactcacgaaactagtcctacccttttaaaacagaacaaaacggtccttcaatt 317  Q
    ||||| |||| || ||||||||||||||||||||||||| ||||||||||||||||||| ||||| |||||||||||||||||||||||||| |||||||    
T  5819485 catattaaattggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaatt 5819386  T
Q  318 atcatttttgttgcatttttcgtcctacctcctattttcaaactccagaaatgtagagaaatgacagttttag 390  Q
    ||||||||||||||||||||||||||||| || ||||| |  ||||| ||| | | |||||||||||||||||    
T  5819385 atcatttttgttgcatttttcgtcctaccccccatttt-attctccaaaaacgcaaagaaatgacagttttag 5819314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 227 - 346
Target Start/End: Complemental strand, 18183516 - 18183397
Alignment:
Q  227 taggtttaattacacttttggtcctcgtgtattggcctactcacgaaactagtcctacccttttaaaacagaacaaaacggtccttcaattatcattttt 326  Q
    |||| ||||||||||||||||||||||||| ||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||    
T  18183516 taggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttt 18183417  T
Q  327 gttgcatttttcgtcctacc 346  Q
    ||||||||||||||||||||    
T  18183416 gttgcatttttcgtcctacc 18183397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 103; E-Value: 4e-51
Query Start/End: Original strand, 232 - 390
Target Start/End: Original strand, 8647441 - 8647598
Alignment:
Q  232 ttaattacacttttggtcctcgtgtattggcctactcacgaaactagtcctacccttttaaaacagaacaaaacggtccttcaattatcatttttgttgc 331  Q
    ||||||||||||||||||||||||| ||||||||||||||||||| ||||| || |||||||||||||||||| ||||||||||||||||||||||||||    
T  8647441 ttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgccgttttaaaacagaacaaaatggtccttcaattatcatttttgttgc 8647540  T
Q  332 atttttcgtcctacctcctattttcaaactccagaaatgtagagaaatgacagttttag 390  Q
    ||||||||||||||| || ||||| |  ||||| ||| | |||||||||||||||||||    
T  8647541 atttttcgtcctaccccccatttt-attctccaaaaacgcagagaaatgacagttttag 8647598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 103; E-Value: 4e-51
Query Start/End: Original strand, 232 - 390
Target Start/End: Complemental strand, 29455284 - 29455127
Alignment:
Q  232 ttaattacacttttggtcctcgtgtattggcctactcacgaaactagtcctacccttttaaaacagaacaaaacggtccttcaattatcatttttgttgc 331  Q
    |||||||||| |||||||||||||| |||| |||||||||||||| ||||| ||||||||||||||||||||| ||||||||||||||||||||||||||    
T  29455284 ttaattacacctttggtcctcgtgttttggtctactcacgaaactggtcctgcccttttaaaacagaacaaaatggtccttcaattatcatttttgttgc 29455185  T
Q  332 atttttcgtcctacctcctattttcaaactccagaaatgtagagaaatgacagttttag 390  Q
    ||||||||||||||| || ||||| |  ||||| ||| |||||||||||||||||||||    
T  29455184 atttttcgtcctaccccccatttt-attctccaaaaacgtagagaaatgacagttttag 29455127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 100; E-Value: 3e-49
Query Start/End: Original strand, 227 - 390
Target Start/End: Complemental strand, 15372420 - 15372258
Alignment:
Q  227 taggtttaattacacttttggtcctcgtgtattggcctactcacgaaactagtcctacccttttaaaacagaacaaaacggtccttcaattatcattttt 326  Q
    |||||||||||||||||||||||||||||| ||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||| ||||||||||    
T  15372420 taggtttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaagtatcattttt 15372321  T
Q  327 gttgcatttttcgtcctacctcctattttcaaactccagaaatgtagagaaatgacagttttag 390  Q
    ||||||||||| || |||| ||| ||||| |   |||| ||| | |||||||||||||||||||    
T  15372320 gttgcattttttgttctacatcccatttt-attttccaaaaacgcagagaaatgacagttttag 15372258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 100; E-Value: 3e-49
Query Start/End: Original strand, 227 - 390
Target Start/End: Complemental strand, 24362383 - 24362221
Alignment:
Q  227 taggtttaattacacttttggtcctcgtgtattggcctactcacgaaactagtcctacccttttaaaacagaacaaaacggtccttcaattatcattttt 326  Q
    |||| ||||||||||||||||||||||| | ||||||||||||||||||| ||||| |||||||||||||||| ||||||||||||||| ||||||||||    
T  24362383 taggcttaattacacttttggtcctcgtattttggcctactcacgaaactggtcctgcccttttaaaacagaataaaacggtccttcaagtatcattttt 24362284  T
Q  327 gttgcatttttcgtcctacctcctattttcaaactccagaaatgtagagaaatgacagttttag 390  Q
    |||||||||||||||||||| || ||||| |  ||||| ||| | |||||||||||||||||||    
T  24362283 gttgcatttttcgtcctaccccccatttt-attctccaaaaacgcagagaaatgacagttttag 24362221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 232 - 386
Target Start/End: Original strand, 19359139 - 19359292
Alignment:
Q  232 ttaattacacttttggtcctcgtgtattggcctactcacgaaactagtcctacccttttaaaacagaacaaaacggtccttcaattatcatttttgttgc 331  Q
    ||||||||||||||||||||| ||| ||||||||||||||||||| ||||| ||||||||||| ||||||||||||||||||||||||||||||||||||    
T  19359139 ttaattacacttttggtcctcttgttttggcctactcacgaaactggtcctgcccttttaaaatagaacaaaacggtccttcaattatcatttttgttgc 19359238  T
Q  332 atttttcgtcctacctcctattttcaaactccagaaatgtagagaaatgacagtt 386  Q
    ||||||||||||||| || ||||| |  ||||| ||| | |||||||||||||||    
T  19359239 atttttcgtcctaccccccatttt-attctccaaaaacgcagagaaatgacagtt 19359292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 226 - 390
Target Start/End: Original strand, 8460927 - 8461090
Alignment:
Q  226 ataggtttaattacacttttggtcctcgtgtattggcctactcacgaaactagtcctacccttttaaaacagaacaaaacggtccttcaattatcatttt 325  Q
    ||||| |||||| ||||||||||| |||| | ||||||||||||||||||| ||||| |||||||||||||||||||||||||| |||||||||||||||    
T  8460927 ataggcttaattccacttttggtcatcgtattttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttt 8461026  T
Q  326 tgttgcatttttcgtcctacctcctattttcaaactccagaaatgtagagaaatgacagttttag 390  Q
    |||||||||||||||| |||| || ||||| |  ||||| ||||| |||||||||||||||||||    
T  8461027 tgttgcatttttcgtcataccccccatttt-attctccaaaaatgcagagaaatgacagttttag 8461090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 96; E-Value: 6e-47
Query Start/End: Original strand, 232 - 407
Target Start/End: Original strand, 15371874 - 15372052
Alignment:
Q  232 ttaattacacttttggtcctcgtgtattggcctactcacgaaactagtcctacccttttaaaacagaacaaaacggtccttcaattatcatttttgttgc 331  Q
    ||||||||||||||| ||||||| | |||| |||||||||||  | ||||| ||||||||||||||||||||| ||||||||||||||||||||||||||    
T  15371874 ttaattacacttttgatcctcgtattttggtctactcacgaat-tggtcctgcccttttaaaacagaacaaaatggtccttcaattatcatttttgttgc 15371972  T
Q  332 atttttcgtcctacctcctattttcaaactccagaaatgtagagaaatgacagtt----ttaggcggntttagacctacc 407  Q
    ||||||||||| ||||||||||| ||||||| ||||| | |||||||||| ||||    |||||||| ||||||||||||    
T  15371973 atttttcgtcccacctcctatttgcaaactctagaaacgcagagaaatgatagttttaattaggcggttttagacctacc 15372052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 227 - 390
Target Start/End: Complemental strand, 14215790 - 14215628
Alignment:
Q  227 taggtttaattacacttttggtcctcgtgtattggcctactcacgaaactagtcctacccttttaaaacagaacaaaacggtccttcaattatcattttt 326  Q
    |||| ||||||||| ||||||||||||||| ||| |||||||||||||||  |||| |||||||||||||||||||||||||||||||| ||||||||||    
T  14215790 taggcttaattacaattttggtcctcgtgttttgacctactcacgaaactgatcctgcccttttaaaacagaacaaaacggtccttcaagtatcattttt 14215691  T
Q  327 gttgcatttttcgtcctacctcctattttcaaactccagaaatgtagagaaatgacagttttag 390  Q
    ||||||||||||||| || | || ||||| |  ||||| ||| |||||||||||||||||||||    
T  14215690 gttgcatttttcgtcttaacccccatttt-attctccaaaaacgtagagaaatgacagttttag 14215628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 227 - 390
Target Start/End: Original strand, 15708969 - 15709130
Alignment:
Q  227 taggtttaattacacttttggtcctcgtgtattggcctactcacgaaactagtcctacccttttaaaacagaacaaaacggtccttcaattatcattttt 326  Q
    |||| |||||||||||||||||||| |||| ||||||||||||||||||| ||  | |||||||||||||||||||||||||||||||||||||||||||    
T  15708969 taggcttaattacacttttggtcctagtgttttggcctactcacgaaactggttatgcccttttaaaacagaacaaaacggtccttcaattatcattttt 15709068  T
Q  327 gttgcatttttcgtcctacctcctattttcaaactccagaaatgtagagaaatgacagttttag 390  Q
    ||||||| |||||||||||| || ||||| |  ||||| ||| | |||||||||||||||||||    
T  15709069 gttgcatatttcgtcctacc-cccatttt-attctccaaaaacgcagagaaatgacagttttag 15709130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 227 - 390
Target Start/End: Complemental strand, 164738 - 164576
Alignment:
Q  227 taggtttaattacacttttggtcctcgtgtattggcctactcacgaaactagtcctacccttttaaaacagaacaaaacggtccttcaattatcattttt 326  Q
    |||| ||||||| | ||||| ||||| ||| |||||| |||||| ||||| ||| | |||||||||||||||||||||||||||||||||||||||||||    
T  164738 taggcttaattataattttgatcctcatgttttggccaactcactaaactggtcttgcccttttaaaacagaacaaaacggtccttcaattatcattttt 164639  T
Q  327 gttgcatttttcgtcctacctcctattttcaaactccagaaatgtagagaaatgacagttttag 390  Q
    ||||||||||| |||||||| || ||||| |  ||||| |||||||||||||||||||||||||    
T  164638 gttgcattttttgtcctaccccccatttt-attctccaaaaatgtagagaaatgacagttttag 164576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 235 - 413
Target Start/End: Original strand, 24361843 - 24362020
Alignment:
Q  235 attacacttttggtcctcgtgtattggcctactcacgaaactagtcctacccttttaaaacagaacaaaacggtccttcaattatcatttttgttgcatt 334  Q
    |||||||||||||||| | ||| ||||||||| |||||||||  || | ||||| ||||||||||||||| |||||||||| ||||||||||||||||||    
T  24361843 attacacttttggtccccatgttttggcctacccacgaaactgatcatgcccttgtaaaacagaacaaaatggtccttcaagtatcatttttgttgcatt 24361942  T
Q  335 tttcgtcctacctcctattttcaaactccagaaatgtagagaaatgacagttttaggcggntttagacctacccttatg 413  Q
    |||||||||||| || ||||| |  ||||| ||| | |||||||||| |||||||||||| ||||||||||||| ||||    
T  24361943 tttcgtcctaccccccatttt-attctccacaaacgcagagaaatgatagttttaggcggttttagacctacccctatg 24362020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 227 - 390
Target Start/End: Complemental strand, 14464067 - 14463906
Alignment:
Q  227 taggtttaattacacttttggtcctcgtgtattggcctactcacgaaactagtcctacccttttaaaacagaacaaaacggtccttcaattatcattttt 326  Q
    |||| |||||||||||||| |||||||||| |||||||||||||||||||| |  |  |||||||||| ||||||||||| |||||||||||||||||||    
T  14464067 taggcttaattacacttttagtcctcgtgttttggcctactcacgaaactaattttgtccttttaaaatagaacaaaacgatccttcaattatcattttt 14463968  T
Q  327 gttgcatttttcgtcctacctcctattttcaaactccagaaatgtagagaaatgacagttttag 390  Q
     ||||||||||||||||||| || ||||| |  ||||| ||| | |||||||||||||||||||    
T  14463967 attgcatttttcgtcctacc-ccaatttt-attctccaaaaacgcagagaaatgacagttttag 14463906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 235 - 413
Target Start/End: Original strand, 24325218 - 24325395
Alignment:
Q  235 attacacttttggtcctcgtgtattggcctactcacgaaactagtcctacccttttaaaacagaacaaaacggtccttcaattatcatttttgttgcatt 334  Q
    |||||||||||||||| | ||| ||||||||| |||||||||  || | ||||| ||||||||||||||| |||||||||| |||||||||||| |||||    
T  24325218 attacacttttggtccccatgttttggcctacccacgaaactgatcatgcccttgtaaaacagaacaaaatggtccttcaagtatcatttttgtcgcatt 24325317  T
Q  335 tttcgtcctacctcctattttcaaactccagaaatgtagagaaatgacagttttaggcggntttagacctacccttatg 413  Q
    |||||||||||| || ||||| |  ||||| ||| | |||||||||| |||||||| ||| ||||||||||||| ||||    
T  24325318 tttcgtcctaccccccatttt-attctccacaaacgcagagaaatgatagttttagccggttttagacctacccctatg 24325395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 69; E-Value: 8e-31
Query Start/End: Original strand, 219 - 355
Target Start/End: Complemental strand, 7349571 - 7349436
Alignment:
Q  219 atataaaataggtttaattacacttttggtcctcgtgtattggcctactcacgaaactagtcctacccttttaaaacagaacaaaacggtccttcaatta 318  Q
    ||||||||| || ||||||||||||||||||||||||| |||| |||||||||||| | ||||| | ||||||||||| ||||||||  ||||||| |||    
T  7349571 atataaaat-ggcttaattacacttttggtcctcgtgttttggtctactcacgaaattggtcctgctcttttaaaacaaaacaaaactatccttcagtta 7349473  T
Q  319 tcatttttgttgcatttttcgtcctacctcctatttt 355  Q
    |||||||||||||| ||||| ||||||| || |||||    
T  7349472 tcatttttgttgcacttttcatcctaccccccatttt 7349436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 232 - 346
Target Start/End: Complemental strand, 4222264 - 4222150
Alignment:
Q  232 ttaattacacttttggtcctcgtgtattggcctactcacgaaactagtcctacccttttaaaacagaacaaaacggtccttcaattatcatttttgttgc 331  Q
    ||||||||||||||||||||||||| |||| || ||||||||| | ||| | |||||||||||||||||||||  ||| |||| ||||||||||| ||||    
T  4222264 ttaattacacttttggtcctcgtgttttgggcttctcacgaaaatggtcatgcccttttaaaacagaacaaaattgtcattcagttatcatttttattgc 4222165  T
Q  332 atttttcgtcctacc 346  Q
    |||||||||||||||    
T  4222164 atttttcgtcctacc 4222150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 232 - 390
Target Start/End: Original strand, 16018592 - 16018747
Alignment:
Q  232 ttaattacacttttggtcctcgtgtattggcctactcacgaaactagtcctacccttttaaaacagaacaaaacggtccttcaattatcatttttgttgc 331  Q
    |||||||||||||||||| |||||| |||||||| |||||||| |  || | ||||||||||| |||||||||||||||||||||||| |||||| ||||    
T  16018592 ttaattacacttttggtcttcgtgttttggcctattcacgaaattgatcatgcccttttaaaatagaacaaaacggtccttcaattat-atttttattgc 16018690  T
Q  332 atttttcgtcctacctcctattttcaaactccagaaatgtagagaaatgacagttttag 390  Q
    ||||| ||||||||| || ||||| |  ||||| |||| |||| |||||||||||||||    
T  16018691 attttccgtcctacc-cccatttt-attctccaaaaatatagaaaaatgacagttttag 16018747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 311 - 391
Target Start/End: Original strand, 14462686 - 14462770
Alignment:
Q  311 ttcaattatcatttttgttgcatttttcgtcctacctcctattttcaaactc----cagaaatgtagagaaatgacagttttagg 391  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||    |||||| ||||||||||||||||||||||    
T  14462686 ttcaattatcatttttgttgcatttttcgtcctacctcctattttcaaactccagacagaaacgtagagaaatgacagttttagg 14462770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 232 - 355
Target Start/End: Original strand, 7348562 - 7348685
Alignment:
Q  232 ttaattacacttttggtcctcgtgtattggcctactcacgaaactagtcctacccttttaaaacagaacaaaacggtccttcaattatcatttttgttgc 331  Q
    ||||||||| ||||||||||| ||| || | |||||||||||| | ||| | ||||||||||||||||||||||  ||||||  ||||||||||||||||    
T  7348562 ttaattacatttttggtcctcatgttttagtctactcacgaaattggtcgtgcccttttaaaacagaacaaaactttccttcggttatcatttttgttgc 7348661  T
Q  332 atttttcgtcctacctcctatttt 355  Q
    | ||||||||||||| || |||||    
T  7348662 acttttcgtcctaccccccatttt 7348685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 251 - 390
Target Start/End: Original strand, 25000112 - 25000250
Alignment:
Q  251 tcgtgtattggcctactcacgaaactagtcctacccttttaaaacagaacaaaacggtccttcaattatcatttttgttgcatttttcgtcctacctcct 350  Q
    |||||| ||||||||||||||||  | ||| | |||| ||||||||||| |||| ||||||| ||||||||||||| |||||||||| |||||||| ||     
T  25000112 tcgtgttttggcctactcacgaatttggtcatgccctgttaaaacagaataaaatggtcctttaattatcatttttattgcattttttgtcctacccccc 25000211  T
Q  351 attttcaaactccagaaatgtagagaaatgacagttttag 390  Q
    ||||| |  ||||| ||| |||||||||||||||||||||    
T  25000212 atttt-attctccaaaaacgtagagaaatgacagttttag 25000250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 232 - 346
Target Start/End: Original strand, 4623151 - 4623265
Alignment:
Q  232 ttaattacacttttggtcctcgtgtattggcctactcacgaaactagtcctacccttttaaaacagaacaaaacggtccttcaattatcatttttgttgc 331  Q
    |||||||||||||||||| |||||| ||| | ||||||||||| | ||||| ||  |||||||||||||||||  |||||||||||||||||||| | ||    
T  4623151 ttaattacacttttggtcatcgtgttttgacttactcacgaaattggtcctgcctctttaaaacagaacaaaattgtccttcaattatcatttttatggc 4623250  T
Q  332 atttttcgtcctacc 346  Q
    ||||| |||||||||    
T  4623251 attttccgtcctacc 4623265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 317 - 408
Target Start/End: Original strand, 10721873 - 10721963
Alignment:
Q  317 tatcatttttgttgcatttttcgtcctacctcctattttcaaactccagaaatgtagagaaatgacagttttaggcggntttagacctaccc 408  Q
    |||||| ||| ||||| |||| |||||||||||||||||||| ||||||||| ||||||||||||||||||||||| | |||||||||||||    
T  10721873 tatcatgttttttgcagttttagtcctacctcctattttcaa-ctccagaaacgtagagaaatgacagttttaggcagttttagacctaccc 10721963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 230 - 355
Target Start/End: Complemental strand, 6019314 - 6019189
Alignment:
Q  230 gtttaattacacttttggtcctcgtgtattggcctactcacgaaactagtcctacccttttaaaacagaacaaaacggtccttcaattatcatttttgtt 329  Q
    |||| |||||| |||||||| || ||| ||||| |||||||||||||  || | | |||||||||||||||||||| ||| || ||||||||||||||||    
T  6019314 gtttgattacatttttggtcatcatgttttggc-tactcacgaaactgatcttgctcttttaaaacagaacaaaactgtcttttaattatcatttttgtt 6019216  T
Q  330 gcat-ttttcgtcctacctcctatttt 355  Q
    |||| |||||||||||||||| |||||    
T  6019215 gcattttttcgtcctacctcccatttt 6019189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 232 - 390
Target Start/End: Complemental strand, 24332106 - 24331945
Alignment:
Q  232 ttaattacactttt-ggtcctcgtgtattggcctactcacgaaactagtcctaccctttt-aaaacagaacaaaacggtccttcaattatcat-ttttgt 328  Q
    |||||||||||||| |||| || ||| ||||| |||||||||||||  |||| || |||| ||||||||||||||||||||| |||||||||| ||||||    
T  24332106 ttaattacactttttggtcatcatgttttggcatactcacgaaactgatcctgccttttttaaaacagaacaaaacggtcctgcaattatcattttttgt 24332007  T
Q  329 tgca-tttttcgtcctacctcctattttcaaactccagaaatgtagagaaatgacagttttag 390  Q
    |||| |||||||||||||| || ||| | |  ||||| ||| | |||||||||||||||||||    
T  24332006 tgcattttttcgtcctaccccccattct-attctccaaaaacgcagagaaatgacagttttag 24331945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 232 - 357
Target Start/End: Original strand, 6018317 - 6018441
Alignment:
Q  232 ttaattacacttttggtcctcgtgtattggcctactcacgaaactagtcctacccttttaaaacagaacaaaacggtccttcaattatcatttttgttgc 331  Q
    ||||||||| ||||||| ||||||| |||  |||||||||||||| ||| |  ||||||||||||||||||||   | ||||||||||||||||||||||    
T  6018317 ttaattacatttttggttctcgtgttttgttctactcacgaaactggtcatgtccttttaaaacagaacaaaattat-cttcaattatcatttttgttgc 6018415  T
Q  332 atttttcgtcctacctcctattttca 357  Q
    | |||| ||||||||  |||||||||    
T  6018416 agttttagtcctaccctctattttca 6018441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 232 - 346
Target Start/End: Original strand, 4219666 - 4219780
Alignment:
Q  232 ttaattacacttttggtcctcgtgtattggcctactcacgaaactagtcctacccttttaaaacagaacaaaacggtccttcaattatcatttttgttgc 331  Q
    ||||||||||||||| ||||||||| |||| ||| | || ||| | ||| | || |||||||||||||||||   |||||| | ||||||||||||||||    
T  4219666 ttaattacacttttgatcctcgtgttttgggctatttacaaaaatggtcatgcctttttaaaacagaacaaagttgtcctttagttatcatttttgttgc 4219765  T
Q  332 atttttcgtcctacc 346  Q
    |||||||||||||||    
T  4219766 atttttcgtcctacc 4219780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 317 - 408
Target Start/End: Original strand, 27307148 - 27307238
Alignment:
Q  317 tatcatttttgttgcatttttcgtcctacctcctattttcaaactccagaaatgtagagaaatgacagttttaggcggntttagacctaccc 408  Q
    |||||| ||| ||||| |||| ||| |||||||||||||||| ||||||||| | | ||||||||||||||||||| | |||||||||||||    
T  27307148 tatcatgttttttgcagttttagtcttacctcctattttcaa-ctccagaaacgcatagaaatgacagttttaggcagttttagacctaccc 27307238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 170 - 228
Target Start/End: Complemental strand, 22616777 - 22616719
Alignment:
Q  170 tggtcgaccactctaaaactaatttttaccttattacaaatcagtcctcatataaaata 228  Q
    |||| |||||||||||||||||  |||||||||||||||||||||||||||| ||||||    
T  22616777 tggtggaccactctaaaactaaactttaccttattacaaatcagtcctcatacaaaata 22616719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 242 - 355
Target Start/End: Complemental strand, 4624757 - 4624644
Alignment:
Q  242 ttttggtcctcgtgtattggcctactcacgaaactagtcctacccttttaaaacagaacaaaacggtccttcaattatcatttttgttgcatttttcgtc 341  Q
    |||| |||||||||| ||  ||||||||||||| | ||| |  |  ||||||||| ||||||||  || |||||||||||||| ||||||||||||||||    
T  4624757 ttttcgtcctcgtgttttaacctactcacgaaattggtcatgtctctttaaaacataacaaaactatcattcaattatcatttatgttgcatttttcgtc 4624658  T
Q  342 ctacctcctatttt 355  Q
    ||||| || |||||    
T  4624657 ctaccccccatttt 4624644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 317 - 407
Target Start/End: Original strand, 28494931 - 28495020
Alignment:
Q  317 tatcatttttgttgcatttttcgtcctacctcctattttcaaactccagaaatgtagagaaatgacagttttaggcggntttagacctacc 407  Q
    |||||| ||| ||||| |||| |||||||||||||||||| ||||||||||| | |||||| ||||| |||||||  | ||||||||||||    
T  28494931 tatcatgttttttgcagttttagtcctacctcctattttc-aactccagaaacgcagagaagtgacaattttaggtagttttagacctacc 28495020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 334 - 390
Target Start/End: Complemental strand, 27307499 - 27307444
Alignment:
Q  334 ttttcgtcctacctcctattttcaaactccagaaatgtagagaaatgacagttttag 390  Q
    |||| |||||||||||||||||||| ||||||||||| |||||||||||| ||||||    
T  27307499 ttttagtcctacctcctattttcaa-ctccagaaatgcagagaaatgacatttttag 27307444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 232 - 390
Target Start/End: Complemental strand, 41834602 - 41834445
Alignment:
Q  232 ttaattacacttttggtcctcgtgtattggcctactcacgaaactagtcctacccttttaaaacagaacaaaacggtccttcaattatcat-ttttgttg 330  Q
    ||||||||||||||||||||||  | ||| ||  ||||||||| | ||||| ||  ||| | |  ||||||||| |||||  || |||||| |||| |||    
T  41834602 ttaattacacttttggtcctcgcattttgaccagctcacgaaaatggtcctgcctctttcagatcgaacaaaaccgtccta-aactatcatgtttttttg 41834504  T
Q  331 catttttcgtcctacctcctattttcaaactccagaaatgtagagaaatgacagttttag 390  Q
    || |||| |||||||||||||||||| |||||  |||| | |||||||||||||||||||    
T  41834503 cagttttagtcctacctcctattttc-aactcttgaaacgcagagaaatgacagttttag 41834445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 170 - 228
Target Start/End: Original strand, 12080498 - 12080556
Alignment:
Q  170 tggtcgaccactctaaaactaatttttaccttattacaaatcagtcctcatataaaata 228  Q
    |||| ||||||| ||| |||||  |||||||||||||||||||||||||||| ||||||    
T  12080498 tggtggaccactttaagactaaactttaccttattacaaatcagtcctcatacaaaata 12080556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 175 - 228
Target Start/End: Complemental strand, 33163794 - 33163741
Alignment:
Q  175 gaccactctaaaactaatttttaccttattacaaatcagtcctcatataaaata 228  Q
    ||||||| |||||||||  |||||||||||||||||||||| ||||| ||||||    
T  33163794 gaccactttaaaactaaactttaccttattacaaatcagtcttcatacaaaata 33163741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 183 - 228
Target Start/End: Original strand, 41417356 - 41417401
Alignment:
Q  183 taaaactaatttttaccttattacaaatcagtcctcatataaaata 228  Q
    ||||||||| ||||||||||||||||||||||| ||||| ||||||    
T  41417356 taaaactaaattttaccttattacaaatcagtcatcatacaaaata 41417401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 175 - 215
Target Start/End: Complemental strand, 25654628 - 25654588
Alignment:
Q  175 gaccactctaaaactaatttttaccttattacaaatcagtc 215  Q
    |||||||||||||||||  ||||||||||||||||||||||    
T  25654628 gaccactctaaaactaaactttaccttattacaaatcagtc 25654588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 226 - 390
Target Start/End: Complemental strand, 28290193 - 28290030
Alignment:
Q  226 ataggtttaattacacttttggtcctcgtgtattggcctactcacgaaactagtcctacccttttaaaacagaacaaaacggtccttcaattatcatttt 325  Q
    ||||| ||||||||||||||||||||    | ||| || |||||||||| | |||||| | |||| |||  ||||||||  |||||| || ||| || ||    
T  28290193 ataggcttaattacacttttggtcctaccattttgaccaactcacgaaaatggtcctatcatttttaaatcgaacaaaatcgtccttaaactat-atgtt 28290095  T
Q  326 tgttgcatttttcgtcctacctcctattttcaaactccagaaatgtagagaaatgacagttttag 390  Q
    | ||||| |||| |||||| ||||   |||| ||||||||||| | | |||||||||||||||||    
T  28290094 ttttgcagttttagtcctatctccctatttccaactccagaaacgcacagaaatgacagttttag 28290030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 311 - 346
Target Start/End: Complemental strand, 13814190 - 13814155
Alignment:
Q  311 ttcaattatcatttttgttgcatttttcgtcctacc 346  Q
    |||||||||||||||||||||| |||||||||||||    
T  13814190 ttcaattatcatttttgttgcacttttcgtcctacc 13814155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 170 - 217
Target Start/End: Complemental strand, 27579310 - 27579263
Alignment:
Q  170 tggtcgaccactctaaaactaatttttaccttattacaaatcagtcct 217  Q
    |||| |||||||||||||||||  ||||||||||||||||||| ||||    
T  27579310 tggtggaccactctaaaactaaactttaccttattacaaatcattcct 27579263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #55
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 322 - 408
Target Start/End: Complemental strand, 16753022 - 16752938
Alignment:
Q  322 tttttgttgcatttttcgtcctacctcctattttcaaactccagaaatgtagagaaatgacagttttaggcggntttagacctaccc 408  Q
    ||||| ||||| |||| | |||| ||||||||||||| ||||||||| | ||| ||||| ||||||||||| | |||||||||||||    
T  16753022 ttttttttgcagttttagacctaactcctattttcaa-ctccagaaacgcagaaaaatggcagttttaggcag-tttagacctaccc 16752938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #56
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 328 - 390
Target Start/End: Complemental strand, 28495288 - 28495227
Alignment:
Q  328 ttgcatttttcgtcctacctcctattttcaaactccagaaatgtagagaaatgacagttttag 390  Q
    ||||| |||| |||||||||||||||||| ||||||||||  | |||||||||| ||||||||    
T  28495288 ttgcagttttagtcctacctcctattttc-aactccagaaccgcagagaaatgatagttttag 28495227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #57
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 328 - 390
Target Start/End: Original strand, 32305916 - 32305977
Alignment:
Q  328 ttgcatttttcgtcctacctcctattttcaaactccagaaatgtagagaaatgacagttttag 390  Q
    ||||| |||| |||||||||| ||||||||| |||||||||   |||||||||||||||||||    
T  32305916 ttgcagttttagtcctacctcttattttcaa-ctccagaaacacagagaaatgacagttttag 32305977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #58
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 167 - 228
Target Start/End: Complemental strand, 10237700 - 10237639
Alignment:
Q  167 tgttggtcgaccactctaaaactaatttttaccttattacaaatcagtcctcatataaaata 228  Q
    ||||||| |||||||||| ||||||  ||||||||||||||||| |||| || || ||||||    
T  10237700 tgttggtagaccactctagaactaaactttaccttattacaaattagtcatcgtacaaaata 10237639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #59
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 175 - 228
Target Start/End: Original strand, 29766571 - 29766624
Alignment:
Q  175 gaccactctaaaactaatttttaccttattacaaatcagtcctcatataaaata 228  Q
    ||||||||||| |||||  ||||||||||||||||| ||| |||||| ||||||    
T  29766571 gaccactctaagactaaactttaccttattacaaattagttctcatacaaaata 29766624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #60
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 167 - 228
Target Start/End: Original strand, 33752469 - 33752530
Alignment:
Q  167 tgttggtcgaccactctaaaactaatttttaccttattacaaatcagtcctcatataaaata 228  Q
    ||||||| ||| ||||||| |||||  |||||||||||| |||||| |||||||| ||||||    
T  33752469 tgttggtagactactctaagactaaactttaccttattaaaaatcaatcctcatacaaaata 33752530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #61
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 334 - 390
Target Start/End: Complemental strand, 14340849 - 14340793
Alignment:
Q  334 ttttcgtcctacctcctattttcaaactccagaaatgtagagaaatgacagttttag 390  Q
    |||| |||||| |||||  |||| ||||||| ||| |||||||||||||||||||||    
T  14340849 ttttagtcctatctccttatttccaactccaaaaacgtagagaaatgacagttttag 14340793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #62
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 177 - 221
Target Start/End: Original strand, 36055646 - 36055690
Alignment:
Q  177 ccactctaaaactaatttttaccttattacaaatcagtcctcata 221  Q
    |||||||||||||||  ||||||||||||||||||| | ||||||    
T  36055646 ccactctaaaactaaactttaccttattacaaatcaattctcata 36055690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 152; Significance: 2e-80; HSPs: 40)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 152; E-Value: 2e-80
Query Start/End: Original strand, 227 - 413
Target Start/End: Original strand, 19176288 - 19176474
Alignment:
Q  227 taggtttaattacacttttggtcctcgtgtattggcctactcacgaaactagtcctacccttttaaaacagaacaaaacggtccttcaattatcattttt 326  Q
    |||| ||||||||||||||||||||||||| ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  19176288 taggcttaattacacttttggtcctcgtgttttggcctactcacgaaactagtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttt 19176387  T
Q  327 gttgcatttttcgtcctacctcctattttcaaactccagaaatgtagagaaatgacagttttaggcggntttagacctacccttatg 413  Q
    |||||||||||||||| ||||||||||||||||||||||||| | |||||||||||| |||||||||| ||||||||||||| ||||    
T  19176388 gttgcatttttcgtccgacctcctattttcaaactccagaaacgcagagaaatgacaattttaggcggttttagacctacccatatg 19176474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 147; E-Value: 2e-77
Query Start/End: Original strand, 232 - 413
Target Start/End: Complemental strand, 13225181 - 13225000
Alignment:
Q  232 ttaattacacttttggtcctcgtgtattggcctactcacgaaactagtcctacccttttaaaacagaacaaaacggtccttcaattatcatttttgttgc 331  Q
    ||||||||||||||||||||||||| ||||||||||||||||||| ||| | ||||||||||||||||||||||||||||||||||||||||||||||||    
T  13225181 ttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcttgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgc 13225082  T
Q  332 atttttcgtcctacctcctattttcaaactccagaaatgtagagaaatgacagttttaggcggntttagacctacccttatg 413  Q
    ||||||||||||||||||||||||||||||||||||| | ||||||||| ||||||||||||| ||||||||||||| ||||    
T  13225081 atttttcgtcctacctcctattttcaaactccagaaacgcagagaaatggcagttttaggcggttttagacctacccctatg 13225000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 143; E-Value: 5e-75
Query Start/End: Original strand, 232 - 413
Target Start/End: Original strand, 9928912 - 9929093
Alignment:
Q  232 ttaattacacttttggtcctcgtgtattggcctactcacgaaactagtcctacccttttaaaacagaacaaaacggtccttcaattatcatttttgttgc 331  Q
    ||||||||||||||||||||||||| |||  |||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  9928912 ttaattacacttttggtcctcgtgttttgatctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgc 9929011  T
Q  332 atttttcgtcctacctcctattttcaaactccagaaatgtagagaaatgacagttttaggcggntttagacctacccttatg 413  Q
    ||||||||||||||||||| ||||||||||||||||| | ||||||||| ||||||||||||| ||||||||||||||||||    
T  9929012 atttttcgtcctacctccttttttcaaactccagaaacgcagagaaatgtcagttttaggcggttttagacctacccttatg 9929093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 143; E-Value: 5e-75
Query Start/End: Original strand, 232 - 413
Target Start/End: Complemental strand, 41681676 - 41681495
Alignment:
Q  232 ttaattacacttttggtcctcgtgtattggcctactcacgaaactagtcctacccttttaaaacagaacaaaacggtccttcaattatcatttttgttgc 331  Q
    ||||||||||||||||||||||||| |||||||| |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  41681676 ttaattacacttttggtcctcgtgttttggcctaatcacgaaactggtcctacccttttaaaacagaacaaaacggtccttcaattatcatttttgttgc 41681577  T
Q  332 atttttcgtcctacctcctattttcaaactccagaaatgtagagaaatgacagttttaggcggntttagacctacccttatg 413  Q
    |||||||||||||||| |||||||||||||||||||| | |||||||||  |||||||||||| ||||||||||||| ||||    
T  41681576 atttttcgtcctacctgctattttcaaactccagaaacgcagagaaatggtagttttaggcggttttagacctacccctatg 41681495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 138; E-Value: 5e-72
Query Start/End: Original strand, 229 - 413
Target Start/End: Complemental strand, 12572396 - 12572212
Alignment:
Q  229 ggtttaattacacttttggtcctcgtgtattggcctactcacgaaactagtcctacccttttaaaacagaacaaaacggtccttcaattatcatttttgt 328  Q
    |||||||||||||||||||||||||||| |||| |||||||||||||||||| | | |||||||||||||||||||||||||||||||||||||||||||    
T  12572396 ggtttaattacacttttggtcctcgtgttttggtctactcacgaaactagtcatgctcttttaaaacagaacaaaacggtccttcaattatcatttttgt 12572297  T
Q  329 tgcatttttcgtcctacctcctattttcaaactccagaaatgtagagaaatgacagttttaggcggntttagacctacccttatg 413  Q
    |||||||||||||||||||||||||||||||||||||||| | ||||||||  ||||||||||||| |||||| |||||| ||||    
T  12572296 tgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaattgcagttttaggcggttttagatctacccctatg 12572212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 135; E-Value: 3e-70
Query Start/End: Original strand, 232 - 405
Target Start/End: Complemental strand, 31133762 - 31133589
Alignment:
Q  232 ttaattacacttttggtcctcgtgtattggcctactcacgaaactagtcctacccttttaaaacagaacaaaacggtccttcaattatcatttttgttgc 331  Q
    ||||||||||||||||||||||||| |||||||||||||||||||  |||| |||||||||||||||||||||||||||||||||||| |||||||||||    
T  31133762 ttaattacacttttggtcctcgtgttttggcctactcacgaaactgatcctgcccttttaaaacagaacaaaacggtccttcaattattatttttgttgc 31133663  T
Q  332 atttttcgtcctacctcctattttcaaactccagaaatgtagagaaatgacagttttaggcggntttagaccta 405  Q
    |||||||||| |||||||||||||||||||||||||||| ||||||||||| |||||| |||| ||||||||||    
T  31133662 atttttcgtcatacctcctattttcaaactccagaaatgcagagaaatgacggttttatgcggttttagaccta 31133589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 131; E-Value: 8e-68
Query Start/End: Original strand, 232 - 413
Target Start/End: Original strand, 44831250 - 44831431
Alignment:
Q  232 ttaattacacttttggtcctcgtgtattggcctactcacgaaactagtcctacccttttaaaacagaacaaaacggtccttcaattatcatttttgttgc 331  Q
    ||||||||||||||||||||| ||| ||||||||||||||||| | ||||| |||||||||||||||||||||||||||||| |||||||||||||||||    
T  44831250 ttaattacacttttggtcctcatgttttggcctactcacgaaattggtcctgcccttttaaaacagaacaaaacggtccttccattatcatttttgttgc 44831349  T
Q  332 atttttcgtcctacctcctattttcaaactccagaaatgtagagaaatgacagttttaggcggntttagacctacccttatg 413  Q
    ||||||||||||||||||||||||||||||||| ||| | |||||||||| |||||||||||| ||||||||| ||| ||||    
T  44831350 atttttcgtcctacctcctattttcaaactccataaacgcagagaaatgatagttttaggcggttttagacctgcccctatg 44831431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 127; E-Value: 2e-65
Query Start/End: Original strand, 232 - 413
Target Start/End: Complemental strand, 11656999 - 11656818
Alignment:
Q  232 ttaattacacttttggtcctcgtgtattggcctactcacgaaactagtcctacccttttaaaacagaacaaaacggtccttcaattatcatttttgttgc 331  Q
    ||||||||||||||||||||||||| ||||||||||||||||||| ||||   |||||||||||||||||||| ||||||||||||||||||||||||||    
T  11656999 ttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcccggccttttaaaacagaacaaaatggtccttcaattatcatttttgttgc 11656900  T
Q  332 atttttcgtcctacctcctattttcaaactccagaaatgtagagaaatgacagttttaggcggntttagacctacccttatg 413  Q
    ||||||||||||||||||||||||||||||||||||| | ||||||||  ||||||||||||  | ||||||||||| ||||    
T  11656899 atttttcgtcctacctcctattttcaaactccagaaacgcagagaaatagcagttttaggcgattgtagacctacccctatg 11656818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 123; E-Value: 5e-63
Query Start/End: Original strand, 232 - 413
Target Start/End: Complemental strand, 33328682 - 33328501
Alignment:
Q  232 ttaattacacttttggtcctcgtgtattggcctactcacgaaactagtcctacccttttaaaacagaacaaaacggtccttcaattatcatttttgttgc 331  Q
    ||||||| ||||||||||||||||| || |||||||||||||||||||| | | ||||||||||| ||||||||||||||||||||||||||||||||||    
T  33328682 ttaattagacttttggtcctcgtgttttagcctactcacgaaactagtcatgctcttttaaaacataacaaaacggtccttcaattatcatttttgttgc 33328583  T
Q  332 atttttcgtcctacctcctattttcaaactccagaaatgtagagaaatgacagttttaggcggntttagacctacccttatg 413  Q
    ||||||||||| |||||| |||||||||||||||||| | ||||||||| ||||||||||||| |||| |||||||| ||||    
T  33328582 atttttcgtcccacctcccattttcaaactccagaaacgcagagaaatggcagttttaggcggttttaaacctacccctatg 33328501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 120; E-Value: 3e-61
Query Start/End: Original strand, 227 - 413
Target Start/End: Original strand, 33742920 - 33743105
Alignment:
Q  227 taggtttaattacacttttggtcctcgtgtattggcctactcacgaaactagtcctacccttttaaaacagaacaaaacggtccttcaattatcattttt 326  Q
    |||| ||||||||||||||||||||||||| ||| ||||||||||||||| ||| | |||||||||||||||||||| ||||| ||||||||||||||||    
T  33742920 taggcttaattacacttttggtcctcgtgttttgacctactcacgaaactggtcttgcccttttaaaacagaacaaa-cggtctttcaattatcattttt 33743018  T
Q  327 gttgcatttttcgtcctacctcctattttcaaactccagaaatgtagagaaatgacagttttaggcggntttagacctacccttatg 413  Q
    | ||||||||||||||||||||||||||||| || ||||||| | ||||||||||||||||||||| | ||||||||||||| ||||    
T  33743019 gatgcatttttcgtcctacctcctattttcataccccagaaacgcagagaaatgacagttttaggcagttttagacctacccctatg 33743105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 114; E-Value: 1e-57
Query Start/End: Original strand, 227 - 388
Target Start/End: Complemental strand, 34541095 - 34540934
Alignment:
Q  227 taggtttaattacacttttggtcctcgtgtattggcctactcacgaaactagtcctacccttttaaaacagaacaaaacggtccttcaattatcattttt 326  Q
    |||| ||||||||||||||||||||||||| ||||||||||||||||||| ||||| | ||||||||||| ||||||| |||||||||||||||||||||    
T  34541095 taggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgctcttttaaaacataacaaaatggtccttcaattatcattttt 34540996  T
Q  327 gttgcatttttcgtcctacctcctattttcaaactccagaaatgtagagaaatgacagtttt 388  Q
    |||||||||||||||||||||||||||||||||||  ||||| | |||||||||| ||||||    
T  34540995 gttgcatttttcgtcctacctcctattttcaaacttaagaaacgcagagaaatgatagtttt 34540934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 108; E-Value: 4e-54
Query Start/End: Original strand, 226 - 389
Target Start/End: Original strand, 41681131 - 41681292
Alignment:
Q  226 ataggtttaattacacttttggtcctcgtgtattggcctactcacgaaactagtcctacccttttaaaacagaacaaaacggtccttcaattatcatttt 325  Q
    ||||| ||||||||||||||||||||||||| ||||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||    
T  41681131 ataggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttt 41681230  T
Q  326 tgttgcatttttcgtcctacctcctattttcaaactccagaaatgtagagaaatgacagtttta 389  Q
    ||||||||||||||||||||| || ||||| |  ||||| ||| | ||||||||||||||||||    
T  41681231 tgttgcatttttcgtcctacc-cccatttt-attctccaaaaacgcagagaaatgacagtttta 41681292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 227 - 390
Target Start/End: Complemental strand, 19176837 - 19176675
Alignment:
Q  227 taggtttaattacacttttggtcctcgtgtattggcctactcacgaaactagtcctacccttttaaaacagaacaaaacggtccttcaattatcattttt 326  Q
    |||| ||||||||||||||||||||||||| |||||||||||||| |||| ||||| |||||||||||||||||||||||||||||||||||||||||||    
T  19176837 taggcttaattacacttttggtcctcgtgttttggcctactcacgtaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttt 19176738  T
Q  327 gttgcatttttcgtcctacctcctattttcaaactccagaaatgtagagaaatgacagttttag 390  Q
    |||||||||||||||||||| || ||||| |  ||||| ||| | ||| |||||||||||||||    
T  19176737 gttgcatttttcgtcctaccccccatttt-attctccaaaaacgcagacaaatgacagttttag 19176675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 101; E-Value: 6e-50
Query Start/End: Original strand, 227 - 390
Target Start/End: Original strand, 12571861 - 12572024
Alignment:
Q  227 taggtttaattacacttttggtcctcgtgtattggcctactcacgaaactagtcctacccttttaaaacagaacaaaacggtccttcaattatcattttt 326  Q
    |||| ||||||||||||||||||||||||| ||||||||||||||||||| || ||||||||||||||||||||||||||||| ||||||||||||||||    
T  12571861 taggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggttctacccttttaaaacagaacaaaacggtcattcaattatcattttt 12571960  T
Q  327 gttgcatttttcgtccta-cctcctattttcaaactccagaaatgtagagaaatgacagttttag 390  Q
    |||||||||||||||||| || || ||||| |  ||||| ||| | |||||||||||||||||||    
T  12571961 gttgcatttttcgtcctaaccccccatttt-attctccaaaaacgcagagaaatgacagttttag 12572024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 226 - 390
Target Start/End: Original strand, 31133217 - 31133380
Alignment:
Q  226 ataggtttaattacacttttggtcctcgtgtattggcctactcacgaaactagtcctacccttttaaaacagaacaaaacggtccttcaattatcatttt 325  Q
    ||||| ||||||||||||||||||||||||| ||| ||||||||||||||| ||||  ||||||||||||| |||||||| ||||||||| |||||||||    
T  31133217 ataggcttaattacacttttggtcctcgtgttttgccctactcacgaaactggtcccgcccttttaaaacaaaacaaaacagtccttcaagtatcatttt 31133316  T
Q  326 tgttgcatttttcgtcctacctcctattttcaaactccagaaatgtagagaaatgacagttttag 390  Q
    ||||||||||||||||||||| || ||||| |  ||||| ||| |||||||||||||||||||||    
T  31133317 tgttgcatttttcgtcctaccccccatttt-attctccaaaaacgtagagaaatgacagttttag 31133380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 228 - 346
Target Start/End: Original strand, 33328157 - 33328275
Alignment:
Q  228 aggtttaattacacttttggtcctcgtgtattggcctactcacgaaactagtcctacccttttaaaacagaacaaaacggtccttcaattatcatttttg 327  Q
    ||||||||||||||||||||||||||||| |||||||||||||||||||  || | |||||||||||||||||||||||||||||||| |||||||||||    
T  33328157 aggtttaattacacttttggtcctcgtgttttggcctactcacgaaactgatcatgcccttttaaaacagaacaaaacggtccttcaagtatcatttttg 33328256  T
Q  328 ttgcatttttcgtcctacc 346  Q
    |||||||||||||||||||    
T  33328257 ttgcatttttcgtcctacc 33328275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 93; E-Value: 4e-45
Query Start/End: Original strand, 227 - 355
Target Start/End: Original strand, 11656453 - 11656581
Alignment:
Q  227 taggtttaattacacttttggtcctcgtgtattggcctactcacgaaactagtcctacccttttaaaacagaacaaaacggtccttcaattatcattttt 326  Q
    |||| ||||||||||||||||||||||||| ||||||||||||||||||| ||| | |||||||||||| |||||||||||||||||||||| |||||||    
T  11656453 taggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcatgcccttttaaaactgaacaaaacggtccttcaattaccattttt 11656552  T
Q  327 gttgcatttttcgtcctacctcctatttt 355  Q
    |||||||||||||||||||| || |||||    
T  11656553 gttgcatttttcgtcctaccccccatttt 11656581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 227 - 384
Target Start/End: Original strand, 4629795 - 4629952
Alignment:
Q  227 taggtttaattacacttttggtcctcgtgtattggcctactcacgaaactagtcctacccttttaaaacagaacaaaacggtccttcaattatcattttt 326  Q
    |||| |||||| |||||||  | ||||||| ||||| || |||||||||| ||||| ||||||||||| |||||||||||||| ||||||||||||||||    
T  4629795 taggcttaattgcacttttaattctcgtgttttggcatattcacgaaactggtcctgcccttttaaaatagaacaaaacggtcattcaattatcattttt 4629894  T
Q  327 gttgcatttttcgtcctacctcctattttcaaactccagaaatgtagagaaatgacag 384  Q
     |||||||||||||| |||||||||||||||||||||||||| | | |||||||||||    
T  4629895 attgcatttttcgtcttacctcctattttcaaactccagaaacgcaaagaaatgacag 4629952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 232 - 355
Target Start/End: Complemental strand, 9930199 - 9930076
Alignment:
Q  232 ttaattacacttttggtcctcgtgtattggcctactcacgaaactagtcctacccttttaaaacagaacaaaacggtccttcaattatcatttttgttgc 331  Q
    ||||||||||||||||||||||| | ||||||||||||||||||| ||||| ||||||||||| ||||||||| |||||||||| |||||||||||||||    
T  9930199 ttaattacacttttggtcctcgtattttggcctactcacgaaactggtcctgcccttttaaaatagaacaaaatggtccttcaactatcatttttgttgc 9930100  T
Q  332 atttttcgtcctacctcctatttt 355  Q
    ||||||||||||||| || |||||    
T  9930099 atttttcgtcctaccccccatttt 9930076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 86; E-Value: 6e-41
Query Start/End: Original strand, 233 - 390
Target Start/End: Original strand, 13224645 - 13224800
Alignment:
Q  233 taattacacttttggtcctcgtgtattggcctactcacgaaactagtcctacccttttaaaacagaacaaaacggtccttcaattatcatttttgttgca 332  Q
    ||||||||||||||||| |||||| ||||||||||||||||||| ||| | ||||||||||||||||||||||  ||||||||||||||||||||||| |    
T  13224645 taattacacttttggtcttcgtgttttggcctactcacgaaactggtc-tgcccttttaaaacagaacaaaacaatccttcaattatcatttttgttgaa 13224743  T
Q  333 tttttcgtcctacctcctattttcaaactccagaaatgtagagaaatgacagttttag 390  Q
    |||||||||||||| || ||||| |  ||||| ||| | |||||||||||||||||||    
T  13224744 tttttcgtcctaccccccatttt-attctccaaaaacgcagagaaatgacagttttag 13224800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 84; E-Value: 9e-40
Query Start/End: Original strand, 227 - 390
Target Start/End: Complemental strand, 44831792 - 44831630
Alignment:
Q  227 taggtttaattacacttttggtcctcgtgtattggcctactcacgaaactagtcctacccttttaaaacagaacaaaacggtccttcaattatcattttt 326  Q
    |||| ||||| ||||||||||||||||||| ||||| ||||||||||||| ||||| | |||||||||||||||||||||||  ||||||||||||||||    
T  44831792 taggcttaataacacttttggtcctcgtgttttggcatactcacgaaactggtcctgctcttttaaaacagaacaaaacggttattcaattatcattttt 44831693  T
Q  327 gttgcatttttcgtcctacctcctattttcaaactccagaaatgtagagaaatgacagttttag 390  Q
    ||||||||||| |||||||| || ||||| |  ||||| |||   |||||||||||||||||||    
T  44831692 gttgcatttttggtcctaccccccatttt-attctccaaaaacacagagaaatgacagttttag 44831630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 79; E-Value: 9e-37
Query Start/End: Original strand, 232 - 338
Target Start/End: Complemental strand, 9178177 - 9178071
Alignment:
Q  232 ttaattacacttttggtcctcgtgtattggcctactcacgaaactagtcctacccttttaaaacagaacaaaacggtccttcaattatcatttttgttgc 331  Q
    ||||||||||||||||||||||||| |||||||||||||||||||  || | |||| ||||||||||||||||||||||||||| |||||||||||||||    
T  9178177 ttaattacacttttggtcctcgtgttttggcctactcacgaaactgatcatgccctcttaaaacagaacaaaacggtccttcaagtatcatttttgttgc 9178078  T
Q  332 atttttc 338  Q
    |||||||    
T  9178077 atttttc 9178071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 227 - 337
Target Start/End: Complemental strand, 11337069 - 11336959
Alignment:
Q  227 taggtttaattacacttttggtcctcgtgtattggcctactcacgaaactagtcctacccttttaaaacagaacaaaacggtccttcaattatcattttt 326  Q
    |||| |||||||||||||||||| |||||| ||||| ||||||||||| | ||||  |||||||||||||||| ||||||||| ||||||||||||||||    
T  11337069 taggcttaattacacttttggtcttcgtgttttggcttactcacgaaattggtcccgcccttttaaaacagaataaaacggtctttcaattatcattttt 11336970  T
Q  327 gttgcattttt 337  Q
    |||||||||||    
T  11336969 gttgcattttt 11336959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 321 - 413
Target Start/End: Original strand, 9177724 - 9177816
Alignment:
Q  321 atttttgttgcatttttcgtcctacctcctattttcaaactccagaaatgtagagaaatgacagttttaggcggntttagacctacccttatg 413  Q
    |||||||||||||||||| ||| |||||| |||||||||||||||||| | ||||||||||||||||||||||| ||||||||||||| ||||    
T  9177724 atttttgttgcatttttcatcccacctcccattttcaaactccagaaacgaagagaaatgacagttttaggcggttttagacctacccctatg 9177816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 287 - 390
Target Start/End: Complemental strand, 33743406 - 33743304
Alignment:
Q  287 ttttaaaacagaacaaaacggtccttcaattatcatttttgttgcatttttcgtcctacctcctattttcaaactccagaaatgtagagaaatgacagtt 386  Q
    ||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||| || ||||| |  ||||| ||| | |||||||| ||||||    
T  33743406 ttttaaaacagaacaaaacggtttttcaattatcatttttgttgcatttttcgtcctaccccccatttt-attctccaaaaacgcagagaaataacagtt 33743308  T
Q  387 ttag 390  Q
    ||||    
T  33743307 ttag 33743304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 230 - 390
Target Start/End: Complemental strand, 4630330 - 4630177
Alignment:
Q  230 gtttaattacacttttggtcctcgtgtattggcctactcacgaaactagtcctacccttttaaaacagaacaaaacggtccttcaattatcatttttgtt 329  Q
    ||||||||||||||||| || |||||| |||| |||||||||||| | ||||| |  ||||||||||||| | ||||||||||||||||      |||||    
T  4630330 gtttaattacacttttgatcatcgtgttttgggctactcacgaaattggtcctgcatttttaaaacagaatacaacggtccttcaatta------ttgtt 4630237  T
Q  330 gcatttttcgtcctacctcctattttcaaactccagaaatgtagagaaatgacagttttag 390  Q
    ||||||||| ||||||| || ||||| |  ||||| ||| | ||| |||||||||||||||    
T  4630236 gcatttttcatcctaccccccatttt-attctccaaaaacgcagaaaaatgacagttttag 4630177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 227 - 355
Target Start/End: Original strand, 10918124 - 10918252
Alignment:
Q  227 taggtttaattacacttttggtcctcgtgtattggcctactcacgaaactagtcctacccttttaaaacagaacaaaacggtccttcaattatcattttt 326  Q
    |||||||||||||| |||| |||||||||| |||  |||||||||||| | ||| | ||   |||||||||| |||||  ||||||||| ||||||||||    
T  10918124 taggtttaattacattttttgtcctcgtgttttgatctactcacgaaattggtcttgcctccttaaaacagagcaaaattgtccttcaaatatcattttt 10918223  T
Q  327 gttgcatttttcgtcctacctcctatttt 355  Q
    |||||||||||| || |||| || |||||    
T  10918224 gttgcatttttcatcataccccccatttt 10918252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 240 - 341
Target Start/End: Complemental strand, 8074085 - 8073985
Alignment:
Q  240 acttttggtcctcgtgtattggcctactcacgaaactagtcctacccttttaaaacagaacaaaacggtccttcaattatcatttttgttgcatttttcg 339  Q
    ||||||||||||||||| |||||||| |||||||| |  || |  ||||||||||||||||||||   |||||||||||||| |||||||||||||| ||    
T  8074085 acttttggtcctcgtgttttggcctattcacgaaaatgatcatgtccttttaaaacagaacaaaatcatccttcaattatca-ttttgttgcattttacg 8073987  T
Q  340 tc 341  Q
    ||    
T  8073986 tc 8073985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 170 - 228
Target Start/End: Original strand, 18756431 - 18756489
Alignment:
Q  170 tggtcgaccactctaaaactaatttttaccttattacaaatcagtcctcatataaaata 228  Q
    |||| |||||||||||||||||| |||||||||||||||||| ||||||||| ||||||    
T  18756431 tggtggaccactctaaaactaatctttaccttattacaaatctgtcctcatacaaaata 18756489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 167 - 228
Target Start/End: Original strand, 28220794 - 28220855
Alignment:
Q  167 tgttggtcgaccactctaaaactaatttttaccttattacaaatcagtcctcatataaaata 228  Q
    ||||||| |||||||||||||||||  |||| ||||||||||||||||||||||| ||||||    
T  28220794 tgttggtggaccactctaaaactaagctttatcttattacaaatcagtcctcatacaaaata 28220855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 308 - 355
Target Start/End: Original strand, 43958264 - 43958311
Alignment:
Q  308 tccttcaattatcatttttgttgcatttttcgtcctacctcctatttt 355  Q
    |||||||||||||||||||||||||||||||||||||||  |||||||    
T  43958264 tccttcaattatcatttttgttgcatttttcgtcctaccctctatttt 43958311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 170 - 228
Target Start/End: Complemental strand, 3038689 - 3038631
Alignment:
Q  170 tggtcgaccactctaaaactaatttttaccttattacaaatcagtcctcatataaaata 228  Q
    |||| |||||||||||||||||  ||||||||||||||||||| || ||||| ||||||    
T  3038689 tggtggaccactctaaaactaaactttaccttattacaaatcaatcatcatacaaaata 3038631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 175 - 228
Target Start/End: Original strand, 23176556 - 23176609
Alignment:
Q  175 gaccactctaaaactaatttttaccttattacaaatcagtcctcatataaaata 228  Q
    |||||||||||||||||  |||| |||||||||||| |||||||||| ||||||    
T  23176556 gaccactctaaaactaagctttatcttattacaaattagtcctcatacaaaata 23176609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 175 - 228
Target Start/End: Complemental strand, 34686054 - 34686001
Alignment:
Q  175 gaccactctaaaactaatttttaccttattacaaatcagtcctcatataaaata 228  Q
    ||||||||||| |||||  ||||| |||||||||||||||||||||| ||||||    
T  34686054 gaccactctaagactaaactttactttattacaaatcagtcctcatacaaaata 34686001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 227 - 390
Target Start/End: Original strand, 5730815 - 5730977
Alignment:
Q  227 taggtttaattacacttttggtcctcgtgtattggcctactcacgaaactagtcctacccttttaaaacagaacaaaacggtccttcaattatcattttt 326  Q
    |||| ||||||||||||||||||||    | ||| || |||||||||| |||||||| | |||| |||   |||||||  |||||| || ||| || |||    
T  5730815 taggcttaattacacttttggtcctaccattttgaccaactcacgaaaatagtcctatcttttttaaatcaaacaaaatcgtccttaaactat-atgttt 5730913  T
Q  327 gttgcatttttcgtcctacctcc-tattttcaaactccagaaatgtagagaaatgacagttttag 390  Q
     ||||  |||| ||||||||||| |||||| || ||||||||| ||| |||||||||||||||||    
T  5730914 tttgctgttttagtcctacctccctatttttaa-ctccagaaacgtacagaaatgacagttttag 5730977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 176 - 228
Target Start/End: Complemental strand, 7290997 - 7290945
Alignment:
Q  176 accactctaaaactaatttttaccttattacaaatcagtcctcatataaaata 228  Q
    ||||||||||||||||  |||| |||||||||||||| |||||||| ||||||    
T  7290997 accactctaaaactaaactttatcttattacaaatcaatcctcatacaaaata 7290945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 227 - 390
Target Start/End: Complemental strand, 35427360 - 35427198
Alignment:
Q  227 taggtttaattacacttttggtcctcgtgtattggcctactcacgaaactagtcctacccttttaaaacagaacaaaacggtccttcaattatcattttt 326  Q
    |||| ||||||||||||||||||||||  | ||| || |||||||||| | || |||||  ||| |||| ||||||||  |||| | |||||| || |||    
T  35427360 taggcttaattacacttttggtcctcgcattttgaccaactcacgaaaatggttctacctcttttaaaccgaacaaaatcgtccctaaattat-atattt 35427262  T
Q  327 gttgcatttttcgtcctacctcctattttcaaactccagaaatgtagagaaatgacagttttag 390  Q
     ||||| |||| |||| | ||||   |||| ||||||| ||| | | |||||||||||||||||    
T  35427261 tttgcagttttagtcccatctccctatttccaactccataaacgcacagaaatgacagttttag 35427198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 167 - 228
Target Start/End: Original strand, 4108676 - 4108737
Alignment:
Q  167 tgttggtcgaccactctaaaactaatttttaccttattacaaatcagtcctcatataaaata 228  Q
    ||||||| ||||||| |||||||||  |||| ||||||||||| ||||| ||||| ||||||    
T  4108676 tgttggtggaccactttaaaactaagctttatcttattacaaaacagtcttcatacaaaata 4108737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 226 - 262
Target Start/End: Original strand, 9177664 - 9177700
Alignment:
Q  226 ataggtttaattacacttttggtcctcgtgtattggc 262  Q
    ||||| ||||||||||||||||||||||||| |||||    
T  9177664 ataggcttaattacacttttggtcctcgtgttttggc 9177700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 334 - 390
Target Start/End: Original strand, 18805267 - 18805322
Alignment:
Q  334 ttttcgtcctacctcctattttcaaactccagaaatgtagagaaatgacagttttag 390  Q
    |||| |||||||||||||| ||||| |||||||||   |||||||||||||||||||    
T  18805267 ttttagtcctacctcctatcttcaa-ctccagaaacacagagaaatgacagttttag 18805322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 152; Significance: 2e-80; HSPs: 40)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 152; E-Value: 2e-80
Query Start/End: Original strand, 227 - 413
Target Start/End: Complemental strand, 19591072 - 19590886
Alignment:
Q  227 taggtttaattacacttttggtcctcgtgtattggcctactcacgaaactagtcctacccttttaaaacagaacaaaacggtccttcaattatcattttt 326  Q
    |||| ||||||||||||||||| ||||||| ||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||    
T  19591072 taggcttaattacacttttggtactcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttt 19590973  T
Q  327 gttgcatttttcgtcctacctcctattttcaaactccagaaatgtagagaaatgacagttttaggcggntttagacctacccttatg 413  Q
    |||||||||||||||||||||||||||||||||||||||||| | ||||||||||||||||||||||| ||||||||||||| ||||    
T  19590972 gttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagttttaggcggttttagacctacccctatg 19590886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 140; E-Value: 3e-73
Query Start/End: Original strand, 227 - 413
Target Start/End: Complemental strand, 38859188 - 38859002
Alignment:
Q  227 taggtttaattacacttttggtcctcgtgtattggcctactcacgaaactagtcctacccttttaaaacagaacaaaacggtccttcaattatcattttt 326  Q
    |||| ||||||||||||||||||||||||| ||||||||||||||||| | ||||| |||||||||||||||||||||||||||||| ||||||||||||    
T  38859188 taggcttaattacacttttggtcctcgtgttttggcctactcacgaaattggtcctgcccttttaaaacagaacaaaacggtccttccattatcattttt 38859089  T
Q  327 gttgcatttttcgtcctacctcctattttcaaactccagaaatgtagagaaatgacagttttaggcggntttagacctacccttatg 413  Q
    |||||||||||||||||||||||||||||||||||||||||| | |||||||||| |||||||||||| ||||||||| ||| ||||    
T  38859088 gttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgatagttttaggcggttttagacctgcccctatg 38859002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 137; E-Value: 2e-71
Query Start/End: Original strand, 226 - 413
Target Start/End: Original strand, 32004611 - 32004798
Alignment:
Q  226 ataggtttaattacacttttggtcctcgtgtattggcctactcacgaaactagtcctacccttttaaaacagaacaaaacggtccttcaattatcatttt 325  Q
    ||||| ||||||||||||||||||||||||| ||||||||||||||||| |  |||| ||||||||||||||||||||| ||||||||||||||||||||    
T  32004611 ataggcttaattacacttttggtcctcgtgttttggcctactcacgaaattgatcctgcccttttaaaacagaacaaaatggtccttcaattatcatttt 32004710  T
Q  326 tgttgcatttttcgtcctacctcctattttcaaactccagaaatgtagagaaatgacagttttaggcggntttagacctacccttatg 413  Q
    |||||||||||||| |||||||||||||||||||||||||||| | |||||||||||||||||| |||| ||||||||||||| ||||    
T  32004711 tgttgcatttttcgccctacctcctattttcaaactccagaaacgcagagaaatgacagttttaagcggttttagacctacccctatg 32004798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 132; E-Value: 2e-68
Query Start/End: Original strand, 227 - 413
Target Start/End: Complemental strand, 37787314 - 37787128
Alignment:
Q  227 taggtttaattacacttttggtcctcgtgtattggcctactcacgaaactagtcctacccttttaaaacagaacaaaacggtccttcaattatcattttt 326  Q
    |||| ||||||| ||||||||||||||||| ||||||||||||||||||| ||||| | |||||||| |||||||||||||| |||||||||||||||||    
T  37787314 taggcttaattatacttttggtcctcgtgttttggcctactcacgaaactggtcctgctcttttaaatcagaacaaaacggttcttcaattatcattttt 37787215  T
Q  327 gttgcatttttcgtcctacctcctattttcaaactccagaaatgtagagaaatgacagttttaggcggntttagacctacccttatg 413  Q
    |||||||||||||||||||||||||||||||||||||||||| | ||||||||||||||||| ||| | ||||||||||||| ||||    
T  37787214 gttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagtttttggcagttttagacctacccctatg 37787128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 127; E-Value: 2e-65
Query Start/End: Original strand, 232 - 413
Target Start/End: Complemental strand, 19830961 - 19830781
Alignment:
Q  232 ttaattacacttttggtcctcgtgtattggcctactcacgaaactagtcctacccttttaaaacagaacaaaacggtccttcaattatcatttttgttgc 331  Q
    ||||||||||||||||||||||||| ||||||||||||| ||||| |||||  |||||||||||| ||||||||||| ||||||||||||||||||||||    
T  19830961 ttaattacacttttggtcctcgtgttttggcctactcacaaaactggtcctgtccttttaaaacataacaaaacggtacttcaattatcatttttgttgc 19830862  T
Q  332 atttttcgtcctacctcctattttcaaactccagaaatgtagagaaatgacagttttaggcggntttagacctacccttatg 413  Q
    |||||| ||||||||||||||||||||||||||||||   ||||||||||||||||||||||| ||||||||||||| ||||    
T  19830861 attttt-gtcctacctcctattttcaaactccagaaacacagagaaatgacagttttaggcggttttagacctacccctatg 19830781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 127; E-Value: 2e-65
Query Start/End: Original strand, 242 - 407
Target Start/End: Original strand, 29099863 - 29100028
Alignment:
Q  242 ttttggtcctcgtgtattggcctactcacgaaactagtcctacccttttaaaacagaacaaaacggtccttcaattatcatttttgttgcatttttcgtc 341  Q
    ||||||||||||||| |||||||||||||||||||  |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  29099863 ttttggtcctcgtgttttggcctactcacgaaactgatcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgcatttttcgtc 29099962  T
Q  342 ctacctcctattttcaaactccagaaatgtagagaaatgacagttttaggcggntttagacctacc 407  Q
    ||||||||||||||||||| ||||||| ||||| ||||||||||||||||  | ||||||||||||    
T  29099963 ctacctcctattttcaaaccccagaaacgtagataaatgacagttttaggaagttttagacctacc 29100028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 127; E-Value: 2e-65
Query Start/End: Original strand, 232 - 413
Target Start/End: Original strand, 35288906 - 35289087
Alignment:
Q  232 ttaattacacttttggtcctcgtgtattggcctactcacgaaactagtcctacccttttaaaacagaacaaaacggtccttcaattatcatttttgttgc 331  Q
    |||||||||||||||||| |||| | ||||||||||||||||||| ||||| ||||||||||||||||||||| ||||||||||||||||||||||||||    
T  35288906 ttaattacacttttggtcatcgtattttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaatggtccttcaattatcatttttgttgc 35289005  T
Q  332 atttttcgtcctacctcctattttcaaactccagaaatgtagagaaatgacagttttaggcggntttagacctacccttatg 413  Q
    |||||||||||||| || |||||||||||||||||||   |||||||||||||||||| |||| ||||||||||||| ||||    
T  35289006 atttttcgtcctacttcatattttcaaactccagaaacacagagaaatgacagttttaagcggttttagacctacccctatg 35289087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 125; E-Value: 3e-64
Query Start/End: Original strand, 227 - 406
Target Start/End: Original strand, 2658837 - 2659016
Alignment:
Q  227 taggtttaattacacttttggtcctcgtgtattggcctactcacgaaactagtcctacccttttaaaacagaacaaaacggtccttcaattatcattttt 326  Q
    |||| |||||||||||||| |||||||||| ||||||||||||||||||| ||||| ||||||||||| ||||||||| |||||||||||||||||||||    
T  2658837 taggcttaattacactttttgtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaatagaacaaaatggtccttcaattatcattttt 2658936  T
Q  327 gttgcatttttcgtcctacctcctattttcaaactccagaaatgtagagaaatgacagttttaggcggntttagacctac 406  Q
    ||||||||||||||| |||||||||||||||||||||| ||| | ||||||||| ||||||||||| | |||||||||||    
T  2658937 gttgcatttttcgtcatacctcctattttcaaactccaaaaacgcagagaaatggcagttttaggccgttttagacctac 2659016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 121; E-Value: 7e-62
Query Start/End: Original strand, 226 - 413
Target Start/End: Original strand, 34533788 - 34533975
Alignment:
Q  226 ataggtttaattacacttttggtcctcgtgtattggcctactcacgaaactagtcctacccttttaaaacagaacaaaacggtccttcaattatcatttt 325  Q
    ||||| ||||||||||||||||||||||||| ||||||||||||||||||| ||| | | |||||||||||||| |||| |||| |||||||||||||||    
T  34533788 ataggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcatgctcttttaaaacagaataaaatggtcattcaattatcatttt 34533887  T
Q  326 tgttgcatttttcgtcctacctcctattttcaaactccagaaatgtagagaaatgacagttttaggcggntttagacctacccttatg 413  Q
    ||||||||||| ||||||||||||||||||||||||||| ||| | |||||||||||| |||||||| | ||||||||||||| ||||    
T  34533888 tgttgcattttccgtcctacctcctattttcaaactccaaaaacgcagagaaatgacacttttaggcagttttagacctacccctatg 34533975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 119; E-Value: 1e-60
Query Start/End: Original strand, 232 - 407
Target Start/End: Complemental strand, 4641983 - 4641811
Alignment:
Q  232 ttaattacacttttggtcctcgtgtattggcctactcacgaaactagtcctacccttttaaaacagaacaaaacggtccttcaattatcatttttgttgc 331  Q
    ||||||||||||||||||||||||| |||||||||||||   ||| |||||  |||||||||||||||||||||||||||||||||||||||||||||||    
T  4641983 ttaattacacttttggtcctcgtgttttggcctactcac---actggtcctgtccttttaaaacagaacaaaacggtccttcaattatcatttttgttgc 4641887  T
Q  332 atttttcgtcctacctcctattttcaaactccagaaatgtagagaaatgacagttttaggcggntttagacctacc 407  Q
    || ||||||||||| |||||||||||||||| ||||| | ||||||||||||||||||||||| ||||||| ||||    
T  4641886 atatttcgtcctacgtcctattttcaaactctagaaacgcagagaaatgacagttttaggcggttttagacatacc 4641811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 114; E-Value: 1e-57
Query Start/End: Original strand, 225 - 390
Target Start/End: Original strand, 19830416 - 19830580
Alignment:
Q  225 aataggtttaattacacttttggtcctcgtgtattggcctactcacgaaactagtcctacccttttaaaacagaacaaaacggtccttcaattatcattt 324  Q
    |||||||||||||||||||||||||||||||| ||||||||||||||||||| ||| | |||||||||||||||||||||||||||||||||||||||||    
T  19830416 aataggtttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcttgcccttttaaaacagaacaaaacggtccttcaattatcattt 19830515  T
Q  325 ttgttgcatttttcgtcctacctcctattttcaaactccagaaatgtagagaaatgacagttttag 390  Q
    |||||||||||||||||||||| || ||||| |  ||||| ||| | |||||||||||||||||||    
T  19830516 ttgttgcatttttcgtcctaccccccatttt-attctccaaaaacgcagagaaatgacagttttag 19830580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 112; E-Value: 2e-56
Query Start/End: Original strand, 227 - 408
Target Start/End: Original strand, 23952728 - 23952910
Alignment:
Q  227 taggtttaattacacttttggtcctcgtgtattggcc-tactcacgaaactagtcctacccttttaaaacagaacaaaacggtccttcaattatcatttt 325  Q
    |||| ||||||||||||||||||||||||| ||| || ||||||||||| | ||| | ||||||||||||||||||||||||||||||||||||||||||    
T  23952728 taggcttaattacacttttggtcctcgtgttttgaccctactcacgaaattggtcatgcccttttaaaacagaacaaaacggtccttcaattatcatttt 23952827  T
Q  326 tgttgcatttttcgtcctacctcctattttcaaactccagaaatgtagagaaatgacagttttaggcggntttagacctaccc 408  Q
     ||||||||||||||||||||| |||||||||||| ||||||| | |||||||||| |||||||||| | |||| ||||||||    
T  23952828 ggttgcatttttcgtcctaccttctattttcaaaccccagaaacgcagagaaatgatagttttaggcagttttaaacctaccc 23952910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 103; E-Value: 4e-51
Query Start/End: Original strand, 232 - 390
Target Start/End: Original strand, 19590528 - 19590685
Alignment:
Q  232 ttaattacacttttggtcctcgtgtattggcctactcacgaaactagtcctacccttttaaaacagaacaaaacggtccttcaattatcatttttgttgc 331  Q
    ||||||||||||||||||||||||| ||||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  19590528 ttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgc 19590627  T
Q  332 atttttcgtcctacctcctattttcaaactccagaaatgtagagaaatgacagttttag 390  Q
    ||||||| ||||||| || ||||| |  ||||| |||   |||||||||||||||||||    
T  19590628 atttttcatcctaccccccatttt-attctccaaaaacccagagaaatgacagttttag 19590685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 103; E-Value: 4e-51
Query Start/End: Original strand, 232 - 390
Target Start/End: Original strand, 37786770 - 37786927
Alignment:
Q  232 ttaattacacttttggtcctcgtgtattggcctactcacgaaactagtcctacccttttaaaacagaacaaaacggtccttcaattatcatttttgttgc 331  Q
    ||||||||||||||||||||||||| |||||||||| |||||||| ||||| ||||||||||||| ||||||||||||||||||||||||||||||||||    
T  37786770 ttaattacacttttggtcctcgtgttttggcctacttacgaaactggtcctgcccttttaaaacataacaaaacggtccttcaattatcatttttgttgc 37786869  T
Q  332 atttttcgtcctacctcctattttcaaactccagaaatgtagagaaatgacagttttag 390  Q
    ||||||||||||||| || ||||| |  ||||| ||| | |||||||||||||||||||    
T  37786870 atttttcgtcctaccccccatttt-attctccaaaaacgcagagaaatgacagttttag 37786927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 96; E-Value: 6e-47
Query Start/End: Original strand, 219 - 390
Target Start/End: Complemental strand, 34534346 - 34534176
Alignment:
Q  219 atataaaataggtttaattacacttttggtcctcgtgtattggcctactcacgaaactagtcctacccttttaaaacagaacaaaacggtccttcaatta 318  Q
    ||||||| |||| ||||||| ||||||||| ||||||| |||||||||||||||||||  |||| ||| |||||||||||||||||||||||||||||||    
T  34534346 atataaagtaggcttaattatacttttggttctcgtgttttggcctactcacgaaactgatcctgcccatttaaaacagaacaaaacggtccttcaatta 34534247  T
Q  319 tcatttttgttgcatttttcgtcctacctcctattttcaaactccagaaatgtagagaaatgacagttttag 390  Q
    |||||||||||||||||||||||||||| || ||||| |  ||||| |||   |||||||||||||||||||    
T  34534246 tcatttttgttgcatttttcgtcctaccccccatttt-attctccaaaaaaacagagaaatgacagttttag 34534176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 96; E-Value: 6e-47
Query Start/End: Original strand, 224 - 355
Target Start/End: Complemental strand, 35289451 - 35289320
Alignment:
Q  224 aaataggtttaattacacttttggtcctcgtgtattggcctactcacgaaactagtcctacccttttaaaacagaacaaaacggtccttcaattatcatt 323  Q
    ||||||| ||||||||||||||| ||||||||| ||||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||    
T  35289451 aaataggcttaattacacttttgatcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatt 35289352  T
Q  324 tttgttgcatttttcgtcctacctcctatttt 355  Q
    || ||||||||||||||| |||| || |||||    
T  35289351 ttggttgcatttttcgtcataccccccatttt 35289320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 228 - 390
Target Start/End: Original strand, 4641439 - 4641600
Alignment:
Q  228 aggtttaattacacttttggtcctcgtgtattggcctactcacgaaactagtcctacccttttaaaacagaacaaaacggtccttcaattatcatttttg 327  Q
    ||||||||||||||||||||||||||||| ||||| ||||||||||||| ||||| | ||||| ||||| |||||||||||| |||||||||||||||||    
T  4641439 aggtttaattacacttttggtcctcgtgttttggcttactcacgaaactggtcctgctcttttgaaacataacaaaacggtcattcaattatcatttttg 4641538  T
Q  328 ttgcatttttcgtcctacctcctattttcaaactccagaaatgtagagaaatgacagttttag 390  Q
    ||||||||||||||||||| || ||||| |  ||||| ||||| |||||||||| ||||||||    
T  4641539 ttgcatttttcgtcctaccccccatttt-attctccaaaaatgcagagaaatgatagttttag 4641600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 91; E-Value: 6e-44
Query Start/End: Original strand, 228 - 390
Target Start/End: Complemental strand, 29100397 - 29100236
Alignment:
Q  228 aggtttaattacacttttggtcctcgtgtattggcctactcacgaaactagtcctacccttttaaaacagaacaaaacggtccttcaattatcatttttg 327  Q
    ||||||||||||||||||||||||||||| |||| |||||||| ||| | ||||| |||||||||||||||||||||||||| |||||||||||||||||    
T  29100397 aggtttaattacacttttggtcctcgtgttttggtctactcacaaaattggtcctgcccttttaaaacagaacaaaacggtctttcaattatcatttttg 29100298  T
Q  328 ttgcatttttcgtcctacctcctattttcaaactccagaaatgtagagaaatgacagttttag 390  Q
    |||||||||| |||||||| || ||||| |  ||||| ||| | |||||||| ||||||||||    
T  29100297 ttgcattttttgtcctaccccccatttt-attctccaaaaacgcagagaaataacagttttag 29100236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 91; E-Value: 6e-44
Query Start/End: Original strand, 232 - 390
Target Start/End: Original strand, 38858646 - 38858803
Alignment:
Q  232 ttaattacacttttggtcctcgtgtattggcctactcacgaaactagtcctacccttttaaaacagaacaaaacggtccttcaattatcatttttgttgc 331  Q
    ||||| ||||||||||||||||||| ||||| ||||||||||||| ||||| | |||||||||||||||||||||||| |||||||||||||||||||||    
T  38858646 ttaataacacttttggtcctcgtgttttggcatactcacgaaactggtcctgctcttttaaaacagaacaaaacggtcattcaattatcatttttgttgc 38858745  T
Q  332 atttttcgtcctacctcctattttcaaactccagaaatgtagagaaatgacagttttag 390  Q
    |||||| |||||||| || ||||| |  ||||| ||| | |||||||||||||||||||    
T  38858746 atttttggtcctaccccccatttt-attctccaaaaacgcagagaaatgacagttttag 38858803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 232 - 390
Target Start/End: Complemental strand, 32005156 - 32004999
Alignment:
Q  232 ttaattacacttttggtcctcgtgtattggcctactcacgaaactagtcctacccttttaaaacagaacaaaacggtccttcaattatcatttttgttgc 331  Q
    ||||||||||||||||||||| ||| ||||| ||||||||||||| ||| | ||||||||||| ||||||||||||||||| ||||||||||||||||||    
T  32005156 ttaattacacttttggtcctcatgttttggcatactcacgaaactggtcatgcccttttaaaatagaacaaaacggtcctttaattatcatttttgttgc 32005057  T
Q  332 atttttcgtcctacctcctattttcaaactccagaaatgtagagaaatgacagttttag 390  Q
    ||||||||||||||  || ||||| |  ||||| ||| | |||||||||||||||||||    
T  32005056 atttttcgtcctactccccatttt-attctccaaaaacgcagagaaatgacagttttag 32004999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 84; E-Value: 9e-40
Query Start/End: Original strand, 227 - 390
Target Start/End: Complemental strand, 2659387 - 2659225
Alignment:
Q  227 taggtttaattacacttttggtcctcgtgtattggcctactcacgaaactagtcctacccttttaaaacagaacaaaacggtccttcaattatcattttt 326  Q
    |||| ||||||||| |||||||||||| || |||||||| ||| |||||| ||| | |||||||||||||||||||||||||| ||||||||||||||||    
T  2659387 taggcttaattacaattttggtcctcgcgttttggcctattcatgaaactggtcttgcccttttaaaacagaacaaaacggtcattcaattatcattttt 2659288  T
Q  327 gttgcatttttcgtcctacctcctattttcaaactccagaaatgtagagaaatgacagttttag 390  Q
    |||||||||||| ||||||| || ||||| |  ||||| ||| | |||||||||||||||||||    
T  2659287 gttgcatttttcatcctaccccccatttt-attctccaaaaacgcagagaaatgacagttttag 2659225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 223 - 341
Target Start/End: Complemental strand, 4478251 - 4478133
Alignment:
Q  223 aaaataggtttaattacacttttggtcctcgtgtattggcctactcacgaaactagtcctacccttttaaaacagaacaaaacggtccttcaattatcat 322  Q
    ||||||||||||| |||||||||| ||||||||| ||||||||||||||||||| ||||| |||||||||||||||| || |  ||||||||||||||||    
T  4478251 aaaataggtttaagtacacttttgatcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaataacattgtccttcaattatcat 4478152  T
Q  323 ttttgttgcatttttcgtc 341  Q
    |||||||||||||||||||    
T  4478151 ttttgttgcatttttcgtc 4478133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 227 - 345
Target Start/End: Original strand, 38160949 - 38161067
Alignment:
Q  227 taggtttaattacacttttggtcctcgtgtattggcctactcacgaaactagtcctacccttttaaaacagaacaaaacggtccttcaattatcattttt 326  Q
    |||| |||||||||||||||||||||| || ||||||||||||||||| || |||| |||||||||||||||||||||  ||||||||||||| ||||||    
T  38160949 taggcttaattacacttttggtcctcgggttttggcctactcacgaaaataatcctgcccttttaaaacagaacaaaattgtccttcaattattattttt 38161048  T
Q  327 gttgcatttttcgtcctac 345  Q
    |||||||||||||||||||    
T  38161049 gttgcatttttcgtcctac 38161067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 235 - 390
Target Start/End: Complemental strand, 23953268 - 23953114
Alignment:
Q  235 attacacttttggtcctcgtgtattggcctactcacgaaactagtcctacccttttaaaacagaacaaaacggtccttcaattatcatttttgttgcatt 334  Q
    |||||| ||||||||||||||| |||  |||||||||||||| ||||  |||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  23953268 attacatttttggtcctcgtgttttgatctactcacgaaactggtcccgccctttcaaaacagaacaaaacggtccttcaattatcatttttgttgcatt 23953169  T
Q  335 tttcgtcctacctcctattttcaaactccagaaatgtagagaaatgacagttttag 390  Q
    ||||||| |||| || ||||| |  ||||| ||| | |||||||| ||||||||||    
T  23953168 tttcgtcataccccccatttt-attctccaaaaacgcagagaaataacagttttag 23953114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 218 - 355
Target Start/End: Original strand, 28583428 - 28583565
Alignment:
Q  218 catataaaataggtttaattacacttttggtcctcgtgtattggcctactcacgaaactagtcctacccttttaaaacagaacaaaacggtccttcaatt 317  Q
    |||||| |||||| ||||||||||||||||||||||||| |||||||||||| || | | || || ||||||||||||| || ||||| |||||||||||    
T  28583428 catatataataggcttaattacacttttggtcctcgtgttttggcctactcatgagattggttctgcccttttaaaacataataaaactgtccttcaatt 28583527  T
Q  318 atcatttttgttgcatttttcgtcctacctcctatttt 355  Q
    ||||||||| ||||||||||||||||||| || |||||    
T  28583528 atcatttttattgcatttttcgtcctaccccccatttt 28583565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 232 - 355
Target Start/End: Complemental strand, 28584464 - 28584341
Alignment:
Q  232 ttaattacacttttggtcctcgtgtattggcctactcacgaaactagtcctacccttttaaaacagaacaaaacggtccttcaattatcatttttgttgc 331  Q
    |||||||||||||| |||||||||  |||||||| |||||||| | ||| |  ||||||||||||||||||||  ||||||||||||||||||||||||     
T  28584464 ttaattacacttttcgtcctcgtgctttggcctattcacgaaattggtcatgtccttttaaaacagaacaaaattgtccttcaattatcatttttgttgt 28584365  T
Q  332 atttttcgtcctacctcctatttt 355  Q
    |||||||||| |||| || |||||    
T  28584364 atttttcgtcttaccccccatttt 28584341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 328 - 413
Target Start/End: Original strand, 4477800 - 4477885
Alignment:
Q  328 ttgcatttttcgtcctacctcctattttcaaactccagaaatgtagagaaatgacagttttaggcggntttagacctacccttatg 413  Q
    ||||| |||| |||||||||||||||||||||||||||||| | || |||||||||||||| ||  | ||||||||||||| ||||    
T  4477800 ttgcagttttagtcctacctcctattttcaaactccagaaacgcagggaaatgacagtttttggtagttttagacctacccctatg 4477885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 170 - 228
Target Start/End: Original strand, 22955076 - 22955134
Alignment:
Q  170 tggtcgaccactctaaaactaatttttaccttattacaaatcagtcctcatataaaata 228  Q
    |||| |||||||||||||||||  ||||||||||||||||||||| |||||| ||||||    
T  22955076 tggtggaccactctaaaactaaactttaccttattacaaatcagttctcatacaaaata 22955134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 170 - 228
Target Start/End: Complemental strand, 49002508 - 49002450
Alignment:
Q  170 tggtcgaccactctaaaactaatttttaccttattacaaatcagtcctcatataaaata 228  Q
    |||| |||||||||||||||||  ||||||| |||||||||||||||||||| ||||||    
T  49002508 tggtggaccactctaaaactaaactttacctcattacaaatcagtcctcatacaaaata 49002450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 175 - 228
Target Start/End: Complemental strand, 7743209 - 7743156
Alignment:
Q  175 gaccactctaaaactaatttttaccttattacaaatcagtcctcatataaaata 228  Q
    |||||||||||||||||  |||||||||||||||| ||| ||||||||||||||    
T  7743209 gaccactctaaaactaaactttaccttattacaaagcagccctcatataaaata 7743156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 176 - 228
Target Start/End: Original strand, 8133329 - 8133381
Alignment:
Q  176 accactctaaaactaatttttaccttattacaaatcagtcctcatataaaata 228  Q
    ||||||||||||||||  |||||||||||||||||||||| |||| |||||||    
T  8133329 accactctaaaactaaactttaccttattacaaatcagtcttcatgtaaaata 8133381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 176 - 228
Target Start/End: Complemental strand, 40382167 - 40382115
Alignment:
Q  176 accactctaaaactaatttttaccttattacaaatcagtcctcatataaaata 228  Q
    ||||||||||||||||  ||||||||||||||||||||||| |||| ||||||    
T  40382167 accactctaaaactaaactttaccttattacaaatcagtccgcatacaaaata 40382115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 232 - 390
Target Start/End: Original strand, 9181535 - 9181692
Alignment:
Q  232 ttaattacacttttggtcctcgtgtattggcctactcacgaaactagtcctacccttttaaaacagaacaaaacggtccttcaattatcatttttgttgc 331  Q
    ||||||||||||||||||||    | ||| || |||||||||| | |||||| | |||| |||  ||||||||  |||||| || ||| |||||| ||||    
T  9181535 ttaattacacttttggtcctaccattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactat-attttttttgc 9181633  T
Q  332 atttttcgtcctacctcctattttcaaactccagaaatgtagagaaatgacagttttag 390  Q
    | |||| |||||| ||||   |||| ||||||||||| | | |||||||||||||||||    
T  9181634 agttttagtcctatctccctatttccaactccagaaacgcacagaaatgacagttttag 9181692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 221 - 293
Target Start/End: Complemental strand, 787340 - 787267
Alignment:
Q  221 ataaaataggtttaattacacttttggtcctcgtgtattggcctactcacgaaactagtcctacc-cttttaaa 293  Q
    |||| ||||||||||||||||||||||| ||||| | ||| || |||||||||| | |||||||| ||||||||    
T  787340 ataagataggtttaattacacttttggtgctcgtattttgaccaactcacgaaaatggtcctacctcttttaaa 787267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 167 - 228
Target Start/End: Complemental strand, 5781802 - 5781741
Alignment:
Q  167 tgttggtcgaccactctaaaactaatttttaccttattacaaatcagtcctcatataaaata 228  Q
    |||||||  |||||| ||||||||| |||||| |||||||||||||||| ||||| ||||||    
T  5781802 tgttggtgcaccactttaaaactaagttttactttattacaaatcagtcatcatacaaaata 5781741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 176 - 228
Target Start/End: Complemental strand, 4902598 - 4902546
Alignment:
Q  176 accactctaaaactaatttttaccttattacaaatcagtcctcatataaaata 228  Q
    ||||||||||||||||  ||||||||||||||||| ||| |||||| ||||||    
T  4902598 accactctaaaactaaactttaccttattacaaattagtactcatacaaaata 4902546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 170 - 228
Target Start/End: Original strand, 4618519 - 4618577
Alignment:
Q  170 tggtcgaccactctaaaactaatttttaccttattacaaatcagtcctcatataaaata 228  Q
    |||| |||||||||||||||||  |||| |||| |||||||||||| ||||| ||||||    
T  4618519 tggtggaccactctaaaactaaactttatcttactacaaatcagtcatcatacaaaata 4618577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 224 - 390
Target Start/End: Complemental strand, 25637749 - 25637584
Alignment:
Q  224 aaataggtttaattacacttttggtcctcgtgtattggcctactcacgaaactagtcctacccttttaaaacagaacaaaacggtccttcaattatcatt 323  Q
    |||||| |||||||||||||||||||||    | ||| || |||||||||| | |||||| | |||| |||  ||||||||  |||||| || ||| ||     
T  25637749 aaatagatttaattacacttttggtcctaccattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactat-atg 25637651  T
Q  324 tttgttgcatttttcgtcctacctcctattttcaaactccagaaatgtagagaaatgacagttttag 390  Q
    ||| ||||| |||| |||||| ||||   |||| |||||||||||   | |||||||||||||||||    
T  25637650 ttttttgcagttttagtcctatctccctatttccaactccagaaacacacagaaatgacagttttag 25637584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 317 - 390
Target Start/End: Original strand, 35578986 - 35579058
Alignment:
Q  317 tatcatttttgttgcatttttcgtcctacctcctattttcaaactccagaaatgtagagaaatgacagttttag 390  Q
    |||||| ||| ||||| ||||  |||||| |||||||||||| ||||||||| | |||||||||||| ||||||    
T  35578986 tatcatgttttttgcagttttaatcctacatcctattttcaa-ctccagaaacgcagagaaatgacatttttag 35579058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 317 - 408
Target Start/End: Original strand, 9393823 - 9393913
Alignment:
Q  317 tatcatttttgttgcatttttcgtcctacctcctattttcaaactccagaaatgtagagaaatgacagttttaggcggntttagacctaccc 408  Q
    |||||| ||| ||||  |||| |||||||||||||||||||| |||||||||   || ||||||||||||||| ||   | |||||||||||    
T  9393823 tatcatgttttttgctgttttagtcctacctcctattttcaa-ctccagaaacacagtgaaatgacagttttaagcaattatagacctaccc 9393913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 148; Significance: 6e-78; HSPs: 40)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 148; E-Value: 6e-78
Query Start/End: Original strand, 227 - 413
Target Start/End: Complemental strand, 22219900 - 22219714
Alignment:
Q  227 taggtttaattacacttttggtcctcgtgtattggcctactcacgaaactagtcctacccttttaaaacagaacaaaacggtccttcaattatcattttt 326  Q
    |||| ||||||||||||||||||||||||| ||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||    
T  22219900 taggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttt 22219801  T
Q  327 gttgcatttttcgtcctacctcctattttcaaactccagaaatgtagagaaatgacagttttaggcggntttagacctacccttatg 413  Q
    |||||||||||||| |||||||||||||||||||||||||||   ||||||||||||||||||||||| ||||||||||||| ||||    
T  22219800 gttgcatttttcgttctacctcctattttcaaactccagaaactcagagaaatgacagttttaggcggttttagacctacccctatg 22219714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 145; E-Value: 4e-76
Query Start/End: Original strand, 230 - 413
Target Start/End: Original strand, 18504920 - 18505103
Alignment:
Q  230 gtttaattacacttttggtcctcgtgtattggcctactcacgaaactagtcctacccttttaaaacagaacaaaacggtccttcaattatcatttttgtt 329  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||| ||||| || |||||||||||||||||||||| ||||||||||||||||||||    
T  18504920 gtttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcctttttaaaacagaacaaaacggttcttcaattatcatttttgtt 18505019  T
Q  330 gcatttttcgtcctacctcctattttcaaactccagaaatgtagagaaatgacagttttaggcggntttagacctacccttatg 413  Q
     |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||  ||||||||||||| ||||    
T  18505020 tcatttttcgtcctacctcctattttcaaactctagaaatgtagagaaatgacagttttaggcgattttagacctacccctatg 18505103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 145; E-Value: 4e-76
Query Start/End: Original strand, 226 - 413
Target Start/End: Complemental strand, 23075676 - 23075489
Alignment:
Q  226 ataggtttaattacacttttggtcctcgtgtattggcctactcacgaaactagtcctacccttttaaaacagaacaaaacggtccttcaattatcatttt 325  Q
    ||||| ||||||||||||||||||||||||| ||||||||||||||||||| ||| | ||||||||||||||||||||||||||||||||||||||||||    
T  23075676 ataggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcatgcccttttaaaacagaacaaaacggtccttcaattatcatttt 23075577  T
Q  326 tgttgcatttttcgtcctacctcctattttcaaactccagaaatgtagagaaatgacagttttaggcggntttagacctacccttatg 413  Q
    ||||||||||||||| |||||||||||||| |||||||| ||||| ||||||||||||||||||||| | ||||||||||||||||||    
T  23075576 tgttgcatttttcgttctacctcctatttttaaactccaaaaatgcagagaaatgacagttttaggcagttttagacctacccttatg 23075489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 144; E-Value: 1e-75
Query Start/End: Original strand, 227 - 413
Target Start/End: Complemental strand, 11445534 - 11445348
Alignment:
Q  227 taggtttaattacacttttggtcctcgtgtattggcctactcacgaaactagtcctacccttttaaaacagaacaaaacggtccttcaattatcattttt 326  Q
    |||| ||||||||||||||||||||||||| ||||||||||||||||||| ||||| || ||||||||||||||||||||||||||||||||||||||||    
T  11445534 taggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcctttttaaaacagaacaaaacggtccttcaattatcattttt 11445435  T
Q  327 gttgcatttttcgtcctacctcctattttcaaactccagaaatgtagagaaatgacagttttaggcggntttagacctacccttatg 413  Q
    |||||||||||||||||||||||||||||||||||| ||||| | ||||||||||||||||||||||| |||||||| |||| ||||    
T  11445434 gttgcatttttcgtcctacctcctattttcaaactctagaaacgcagagaaatgacagttttaggcggttttagacccacccctatg 11445348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 144; E-Value: 1e-75
Query Start/End: Original strand, 227 - 401
Target Start/End: Original strand, 12935155 - 12935329
Alignment:
Q  227 taggtttaattacacttttggtcctcgtgtattggcctactcacgaaactagtcctacccttttaaaacagaacaaaacggtccttcaattatcattttt 326  Q
    |||| ||||||||||||||||||||||||| ||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||    
T  12935155 taggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttt 12935254  T
Q  327 gttgcatttttcgtcctacctcctattttcaaactccagaaatgtagagaaatgacagttttaggcggntttaga 401  Q
    |||||||||||||||||||||||||||||||||||||| ||| | ||||||||||||||||||||||| ||||||    
T  12935255 gttgcatttttcgtcctacctcctattttcaaactccataaacgcagagaaatgacagttttaggcggttttaga 12935329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 136; E-Value: 8e-71
Query Start/End: Original strand, 231 - 390
Target Start/End: Original strand, 10899941 - 10900100
Alignment:
Q  231 tttaattacacttttggtcctcgtgtattggcctactcacgaaactagtcctacccttttaaaacagaacaaaacggtccttcaattatcatttttgttg 330  Q
    ||||||||||||||||||| |||||| ||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  10899941 tttaattacacttttggtcatcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttg 10900040  T
Q  331 catttttcgtcctacctcctattttcaaactccagaaatgtagagaaatgacagttttag 390  Q
    |||||||||||||||||||||||||||||||||||||| | |||||||||||||||||||    
T  10900041 catttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagttttag 10900100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 132; E-Value: 2e-68
Query Start/End: Original strand, 219 - 413
Target Start/End: Complemental strand, 18257692 - 18257498
Alignment:
Q  219 atataaaataggtttaattacacttttggtcctcgtgtattggcctactcacgaaactagtcctacccttttaaaacagaacaaaacggtccttcaatta 318  Q
    ||||||||| || ||||||| ||||||||||||||||| ||| ||||||||||||||| ||||| |||||||||||||||||||||||||||||||||||    
T  18257692 atataaaattggcttaattatacttttggtcctcgtgttttgacctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaatta 18257593  T
Q  319 tcatttttgttgcatttttcgtcctacctcctattttcaaactccagaaatgtagagaaatgacagttttaggcggntttagacctacccttatg 413  Q
    | ||||||||| |||||||||||||||||| ||||||| ||||||| | | ||||||||||||||||||||||||| ||||||||||||| ||||    
T  18257592 ttatttttgttacatttttcgtcctacctcatattttccaactccatacacgtagagaaatgacagttttaggcggttttagacctacccctatg 18257498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 128; E-Value: 5e-66
Query Start/End: Original strand, 232 - 413
Target Start/End: Complemental strand, 20741646 - 20741462
Alignment:
Q  232 ttaattacacttttggtcctcgtgtattggcctactcacgaaactagtcctacccttttaaaacagaacaaaacggtccttcaattatcat---ttttgt 328  Q
    ||||||||||| ||||||||||||| |||||||||||||||||||  |||| |||||||||||||||||||||||||||||||||||||||   |||| |    
T  20741646 ttaattacactcttggtcctcgtgttttggcctactcacgaaactgatcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttttttt 20741547  T
Q  329 tgcatttttcgtcctacctcctattttcaaactccagaaatgtagagaaatgacagttttaggcggntttagacctacccttatg 413  Q
    |||||||||||||||||||||||||||||||||||||||| | |||||||||||| |||||||||| ||||||||||||| ||||    
T  20741546 tgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacaattttaggcggttttagacctacccctatg 20741462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 123; E-Value: 5e-63
Query Start/End: Original strand, 232 - 413
Target Start/End: Original strand, 31470318 - 31470499
Alignment:
Q  232 ttaattacacttttggtcctcgtgtattggcctactcacgaaactagtcctacccttttaaaacagaacaaaacggtccttcaattatcatttttgttgc 331  Q
    ||||||||||||||| ||||||||| ||||||||||||||||||| ||| | | |||||||||||||||||||| ||| ||||||||| |||||||||||    
T  31470318 ttaattacacttttgatcctcgtgttttggcctactcacgaaactggtcatgctcttttaaaacagaacaaaacagtcattcaattattatttttgttgc 31470417  T
Q  332 atttttcgtcctacctcctattttcaaactccagaaatgtagagaaatgacagttttaggcggntttagacctacccttatg 413  Q
    ||||||||||||||||||||||||||||||||||||| | ||||||||| ||||||||||||  ||||||||||||| ||||    
T  31470418 atttttcgtcctacctcctattttcaaactccagaaacgcagagaaatggcagttttaggcgattttagacctacccctatg 31470499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 120; E-Value: 3e-61
Query Start/End: Original strand, 227 - 413
Target Start/End: Original strand, 2319670 - 2319855
Alignment:
Q  227 taggtttaattacacttttggtcctcgtgtattggcctactcacgaaactagtcctacccttttaaaacagaacaaaacggtccttcaattatcattttt 326  Q
    |||| ||||||||| ||||||||||||||| ||||||||||||||||||| ||| | |||||||||||||||||||||||||||||||||||||||||||    
T  2319670 taggcttaattacatttttggtcctcgtgttttggcctactcacgaaactggtcatgcccttttaaaacagaacaaaacggtccttcaattatcattttt 2319769  T
Q  327 gttgcatttttcgtcctacctcctattttcaaactccagaaatgtagagaaatgacagttttaggcggntttagacctacccttatg 413  Q
    |||||||||||||||||||| || ||||| |  ||||||||| | |||||||||| |||||||||||| ||||||||||||| ||||    
T  2319770 gttgcatttttcgtcctaccccccatttt-attctccagaaacgcagagaaatgatagttttaggcggttttagacctacccctatg 2319855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 232 - 408
Target Start/End: Original strand, 15827641 - 15827818
Alignment:
Q  232 ttaattacacttttggtcctcgtgtattggcctactcacgaaactagtcctacccttttaaaacagaacaaa--acggtccttcaattatcatttttgtt 329  Q
    ||||||||||||||||||||||||| ||||| ||||||||||||| || ||  |||||||||||| ||||||  |||||||||||| |||||||||||||    
T  15827641 ttaattacacttttggtcctcgtgttttggcttactcacgaaactggttctgtccttttaaaacataacaaattacggtccttcaactatcatttttgtt 15827740  T
Q  330 gcatttttcgtcctacctcctattttcaaactccagaaatgtagagaaatgacagttttaggcggntttagacctaccc 408  Q
    ||||||||||||||||||||||||||||||||||||||| | ||| |||||||| |||||||||| ||||||| |||||    
T  15827741 gcatttttcgtcctacctcctattttcaaactccagaaacgcagaaaaatgaca-ttttaggcggttttagacttaccc 15827818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 105; E-Value: 3e-52
Query Start/End: Original strand, 232 - 392
Target Start/End: Original strand, 11276593 - 11276753
Alignment:
Q  232 ttaattacacttttggtcctcgtgtattggcctactcacgaaactagtcctacccttttaaaacagaacaaaacggtccttcaattatcatttttgttgc 331  Q
    |||||||||| ||| |||| ||||| |||| ||||||| ||||||  |||||||||||||||||||||||||| |||||||||||| ||||||||||| |    
T  11276593 ttaattacacgtttagtccgcgtgttttggtctactcatgaaactgatcctacccttttaaaacagaacaaaatggtccttcaattgtcatttttgtttc 11276692  T
Q  332 atttttcgtcctacctcctattttcaaactccagaaatgtagagaaatgacagttttaggc 392  Q
    ||||||||||||||||||||||||||||||||| ||| | |||||||||||||||||||||    
T  11276693 atttttcgtcctacctcctattttcaaactccaaaaacgcagagaaatgacagttttaggc 11276753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 105; E-Value: 3e-52
Query Start/End: Original strand, 226 - 390
Target Start/End: Original strand, 18257134 - 18257297
Alignment:
Q  226 ataggtttaattacacttttggtcctcgtgtattggcctactcacgaaactagtcctacccttttaaaacagaacaaaacggtccttcaattatcatttt 325  Q
    ||||| ||||||||||||||||||||||||| ||||| ||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||    
T  18257134 ataggcttaattacacttttggtcctcgtgttttggcatactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttt 18257233  T
Q  326 tgttgcatttttcgtcctacctcctattttcaaactccagaaatgtagagaaatgacagttttag 390  Q
    |||||||||||||||| |||| || ||||| |  ||||| ||| | |||||||||||||||||||    
T  18257234 tgttgcatttttcgtcataccccccatttt-attctccaaaaacgcagagaaatgacagttttag 18257297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 227 - 390
Target Start/End: Original strand, 20741098 - 20741260
Alignment:
Q  227 taggtttaattacacttttggtcctcgtgtattggcctactcacgaaactagtcctacccttttaaaacagaacaaaacggtccttcaattatcattttt 326  Q
    |||| ||||||||||||||||||||||||| ||||||||||||||||||| ||||| ||||||||||||||||||||| |||||||||| ||||||||||    
T  20741098 taggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaatggtccttcaaatatcattttt 20741197  T
Q  327 gttgcatttttcgtcctacctcctattttcaaactccagaaatgtagagaaatgacagttttag 390  Q
    |||||||||||||||||||| || ||||| |  ||||| ||| | |||||||||||||||||||    
T  20741198 gttgcatttttcgtcctaccccccatttt-attctccaaaaacgcagagaaatgacagttttag 20741260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 103; E-Value: 4e-51
Query Start/End: Original strand, 232 - 390
Target Start/End: Complemental strand, 10900472 - 10900315
Alignment:
Q  232 ttaattacacttttggtcctcgtgtattggcctactcacgaaactagtcctacccttttaaaacagaacaaaacggtccttcaattatcatttttgttgc 331  Q
    ||||||||||||||||||||||| | ||||||||||||||||||| ||| | ||||||||||||||||||||||||||||||||||||||||||||||||    
T  10900472 ttaattacacttttggtcctcgtattttggcctactcacgaaactggtcatgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgc 10900373  T
Q  332 atttttcgtcctacctcctattttcaaactccagaaatgtagagaaatgacagttttag 390  Q
    ||||||||||||||| || ||||| |  ||||| ||| | |||||||||||||||||||    
T  10900372 atttttcgtcctaccccccatttt-attctccaaaaacgcagagaaatgacagttttag 10900315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 103; E-Value: 4e-51
Query Start/End: Original strand, 232 - 390
Target Start/End: Complemental strand, 11277124 - 11276967
Alignment:
Q  232 ttaattacacttttggtcctcgtgtattggcctactcacgaaactagtcctacccttttaaaacagaacaaaacggtccttcaattatcatttttgttgc 331  Q
    ||||||||||||||||||||||||| ||||| ||||||||||||| ||||| ||||||||||||||||||||||||| ||||||||||||||||||||||    
T  11277124 ttaattacacttttggtcctcgtgttttggcttactcacgaaactggtcctgcccttttaaaacagaacaaaacggttcttcaattatcatttttgttgc 11277025  T
Q  332 atttttcgtcctacctcctattttcaaactccagaaatgtagagaaatgacagttttag 390  Q
    ||||||||||||||| || ||||| |  ||||| ||| | |||||||||||||||||||    
T  11277024 atttttcgtcctaccccccatttt-attctccaaaaacgaagagaaatgacagttttag 11276967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 103; E-Value: 4e-51
Query Start/End: Original strand, 232 - 390
Target Start/End: Complemental strand, 15828183 - 15828026
Alignment:
Q  232 ttaattacacttttggtcctcgtgtattggcctactcacgaaactagtcctacccttttaaaacagaacaaaacggtccttcaattatcatttttgttgc 331  Q
    ||||||||||||||||||||||||| ||||||||||||||||||| ||| ||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  15828183 ttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcatacccttttaaaacaaaacaaaacggtccttcaattatcatttttgttgc 15828084  T
Q  332 atttttcgtcctacctcctattttcaaactccagaaatgtagagaaatgacagttttag 390  Q
    ||||||||||||||| || ||||| |  ||||| ||| | |||||||| ||||||||||    
T  15828083 atttttcgtcctaccccccatttt-attctccaaaaacgcagagaaataacagttttag 15828026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 232 - 390
Target Start/End: Complemental strand, 31470858 - 31470701
Alignment:
Q  232 ttaattacacttttggtcctcgtgtattggcctactcacgaaactagtcctacccttttaaaacagaacaaaacggtccttcaattatcatttttgttgc 331  Q
    |||||||||||||||||||| |||| || |||||||||||||||| || || ||||||||||||||||||||||||||||||||||||||||||||||||    
T  31470858 ttaattacacttttggtccttgtgttttagcctactcacgaaactggttctgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgc 31470759  T
Q  332 atttttcgtcctacctcctattttcaaactccagaaatgtagagaaatgacagttttag 390  Q
    ||||||||||||||| || ||||| |  ||||| ||| | |||||||||||| ||||||    
T  31470758 atttttcgtcctaccccccatttt-attctccaaaaacgcagagaaatgacaattttag 31470701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 93; E-Value: 4e-45
Query Start/End: Original strand, 230 - 346
Target Start/End: Complemental strand, 2322762 - 2322646
Alignment:
Q  230 gtttaattacacttttggtcctcgtgtattggcctactcacgaaactagtcctacccttttaaaacagaacaaaacggtccttcaattatcatttttgtt 329  Q
    |||||||||||||||||||| |||||| |||| |||||||||||||||||| | || |||||||||||||||||||||||||||||||||||||||||||    
T  2322762 gtttaattacacttttggtcttcgtgttttggtctactcacgaaactagtcttgcctttttaaaacagaacaaaacggtccttcaattatcatttttgtt 2322663  T
Q  330 gcatttttcgtcctacc 346  Q
    |||||||||||||||||    
T  2322662 gcatttttcgtcctacc 2322646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 93; E-Value: 4e-45
Query Start/End: Original strand, 226 - 390
Target Start/End: Complemental strand, 12935705 - 12935542
Alignment:
Q  226 ataggtttaattacacttttggtcctcgtgtattggcctactcacgaaactagtcctacccttttaaaacagaacaaaacggtccttcaattatcatttt 325  Q
    ||||| ||||||||||||||||||||||||| ||||| ||||||||||||| ||||| || || ||||||||||||||||||||||||||||||||||||    
T  12935705 ataggcttaattacacttttggtcctcgtgttttggcgtactcacgaaactggtcctgcctttataaaacagaacaaaacggtccttcaattatcatttt 12935606  T
Q  326 tgttgcatttttcgtcctacctcctattttcaaactccagaaatgtagagaaatgacagttttag 390  Q
    |||| |||||||||||||||| || ||||| |  ||||| |||   |||||||||||||||||||    
T  12935605 tgttacatttttcgtcctaccccccatttt-attctccataaacacagagaaatgacagttttag 12935542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 227 - 346
Target Start/End: Original strand, 11444985 - 11445104
Alignment:
Q  227 taggtttaattacacttttggtcctcgtgtattggcctactcacgaaactagtcctacccttttaaaacagaacaaaacggtccttcaattatcattttt 326  Q
    |||| ||||||||||||||||||||||||| |||||||||||||||| || ||||| ||| |||||||||||| |||| |||||||||||||||||||||    
T  11444985 taggcttaattacacttttggtcctcgtgttttggcctactcacgaagctggtcctgcccctttaaaacagaataaaatggtccttcaattatcattttt 11445084  T
Q  327 gttgcatttttcgtcctacc 346  Q
    ||||||||||||||||||||    
T  11445085 gttgcatttttcgtcctacc 11445104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 227 - 390
Target Start/End: Original strand, 28472635 - 28472796
Alignment:
Q  227 taggtttaattacacttttggtcctcgtgtattggcctactcacgaaactagtcctacccttttaaaacagaacaaaacggtccttcaattatcattttt 326  Q
    |||| ||||||||||||||||||||||||| |||||| |||||||||| | ||||| || |||||||||||||||||| |||| ||||||||||||||||    
T  28472635 taggcttaattacacttttggtcctcgtgttttggccaactcacgaaagtggtcctgccattttaaaacagaacaaaatggtcattcaattatcattttt 28472734  T
Q  327 gttgcatttttcgtcctacctcctattttcaaactccagaaatgtagagaaatgacagttttag 390  Q
    |||||||||||||||||||| || ||||| |  ||||| ||| | |||||||||||||||||||    
T  28472735 gttgcatttttcgtcctacc-cccatttt-attctccaaaaacgcagagaaatgacagttttag 28472796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 227 - 390
Target Start/End: Original strand, 29859824 - 29859985
Alignment:
Q  227 taggtttaattacacttttggtcctcgtgtattggcctactcacgaaactagtcctacccttttaaaacagaacaaaacggtccttcaattatcattttt 326  Q
    |||| ||||||||||||||||||||||||| |||||| |||||||||| | ||||| || |||||||||||||||||| |||| ||||||||||||||||    
T  29859824 taggcttaattacacttttggtcctcgtgttttggccaactcacgaaagtggtcctgccattttaaaacagaacaaaatggtcattcaattatcattttt 29859923  T
Q  327 gttgcatttttcgtcctacctcctattttcaaactccagaaatgtagagaaatgacagttttag 390  Q
    |||||||||||||||||||| || ||||| |  ||||| ||| | |||||||||||||||||||    
T  29859924 gttgcatttttcgtcctacc-cccatttt-attctccaaaaacgcagagaaatgacagttttag 29859985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 232 - 413
Target Start/End: Complemental strand, 4811798 - 4811618
Alignment:
Q  232 ttaattacacttttggtcctcgtgtattggcctactcacgaaactagtcctacccttttaaaacagaacaaaacggtccttcaattatcatttttgttgc 331  Q
    ||||||| ||||||| ||||||||| |||||||||||| ||||||  || | |  |||||||||||||||||||||||||||||||||||||||||||||    
T  4811798 ttaattatacttttgatcctcgtgttttggcctactcatgaaactgatcatgcatttttaaaacagaacaaaacggtccttcaattatcatttttgttgc 4811699  T
Q  332 atttttcgtcctacctcctattttcaaactccagaaatgtagagaaatgacagttttaggcggntttagacctacccttatg 413  Q
    ||||||| || |||||||||||||||||| ||| ||| | ||| ||||| || |||||||  | ||||||||||||| ||||    
T  4811698 atttttcatcatacctcctattttcaaaccccataaacgcaga-aaatggcaattttaggtagttttagacctacccctatg 4811618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 86; E-Value: 6e-41
Query Start/End: Original strand, 232 - 389
Target Start/End: Complemental strand, 18505461 - 18505305
Alignment:
Q  232 ttaattacacttttggtcctcgtgtattggcctactcacgaaactagtcctacccttttaaaacagaacaaaacggtccttcaattatcatttttgttgc 331  Q
    ||||||| ||||||||||||||||| |||| ||||||||||||||  |||| ||||||||||||| |||||||| |||||||||||||||||||||||||    
T  18505461 ttaattatacttttggtcctcgtgttttggtctactcacgaaactgatcctgcccttttaaaacataacaaaacagtccttcaattatcatttttgttgc 18505362  T
Q  332 atttttcgtcctacctcctattttcaaactccagaaatgtagagaaatgacagtttta 389  Q
    ||||||||||||||| || ||||| |  |||||  || | ||||||||||||||||||    
T  18505361 atttttcgtcctaccccccatttt-attctccaacaacgaagagaaatgacagtttta 18505305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 219 - 355
Target Start/End: Complemental strand, 1149987 - 1149851
Alignment:
Q  219 atataaaataggtttaattacacttttggtcctcgtgtattggcctactcacgaaactagtcctacccttttaaaacagaacaaaacggtccttcaatta 318  Q
    ||||||| | || ||||||||||||||||||||||||| || ||||||||| |||||| ||| | ||||||||||| |||||||||||||||||||||||    
T  1149987 atataaatttggcttaattacacttttggtcctcgtgttttagcctactcatgaaactggtcatgcccttttaaaatagaacaaaacggtccttcaatta 1149888  T
Q  319 tcatttttgttgcatttttcgtcctacctcctatttt 355  Q
     ||||||||||||||||||||||||||| || |||||    
T  1149887 ccatttttgttgcatttttcgtcctaccccccatttt 1149851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 79; E-Value: 9e-37
Query Start/End: Original strand, 232 - 326
Target Start/End: Original strand, 23074002 - 23074096
Alignment:
Q  232 ttaattacacttttggtcctcgtgtattggcctactcacgaaactagtcctacccttttaaaacagaacaaaacggtccttcaattatcattttt 326  Q
    ||||||||||||||||||||||||| ||||||||||||||||||| ||||| ||||||||||| |||||||||||||||||||||||||||||||    
T  23074002 ttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaatagaacaaaacggtccttcaattatcattttt 23074096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 232 - 355
Target Start/End: Original strand, 29033437 - 29033560
Alignment:
Q  232 ttaattacacttttggtcctcgtgtattggcctactcacgaaactagtcctacccttttaaaacagaacaaaacggtccttcaattatcatttttgttgc 331  Q
    ||||||||||||||||||||||| | ||||||| ||||||||| | ||||| |||||||||||||||||||||| |||||||| ||||||||||||||||    
T  29033437 ttaattacacttttggtcctcgtattttggcctgctcacgaaattggtcctgcccttttaaaacagaacaaaactgtccttcagttatcatttttgttgc 29033536  T
Q  332 atttttcgtcctacctcctatttt 355  Q
    |  |||| ||||||| || |||||    
T  29033537 acatttcatcctaccccccatttt 29033560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 222 - 355
Target Start/End: Original strand, 4811365 - 4811498
Alignment:
Q  222 taaaataggtttaattacacttttggtcctcgtgtattggcctactcacgaaactagtcctacccttttaaaacagaacaaaacggtccttcaattatca 321  Q
    |||||| || |||||||||||||||||||  || | |||| |||||||||||||| ||| | ||||||||||| |||| |||||||||||||||||||||    
T  4811365 taaaattggcttaattacacttttggtcccagtattttggtctactcacgaaactggtcatgcccttttaaaatagaataaaacggtccttcaattatca 4811464  T
Q  322 tttttgttgcatttttcgtcctacctcctatttt 355  Q
    |||||||| ||||||||||| |||| || |||||    
T  4811465 tttttgtttcatttttcgtcttaccccccatttt 4811498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 226 - 317
Target Start/End: Original strand, 1149462 - 1149553
Alignment:
Q  226 ataggtttaattacacttttggtcctcgtgtattggcctactcacgaaactagtcctacccttttaaaacagaacaaaacggtccttcaatt 317  Q
    ||||| ||||||||||||||| ||||||||| ||||||||||||||||||| ||||| ||||||||||||||||||||| ||||||||||||    
T  1149462 ataggcttaattacacttttgatcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaatggtccttcaatt 1149553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 228 - 355
Target Start/End: Complemental strand, 3835272 - 3835145
Alignment:
Q  228 aggtttaattacacttttggtcctcgtgtattggcctactcacgaaactagtcctacccttttaaaacagaacaaaacggtccttcaattatcatttttg 327  Q
    |||||||||||||||||||||||  |||| ||| ||||||||||||| | ||||| ||  |||||||||||||||||  |||||| ||||||||||||||    
T  3835272 aggtttaattacacttttggtccatgtgttttgacctactcacgaaaatggtcctgcctctttaaaacagaacaaaattgtcctttaattatcatttttg 3835173  T
Q  328 ttgcatttttcgtcctacctcctatttt 355  Q
    | ||||||||||||||||| || |||||    
T  3835172 tggcatttttcgtcctaccccccatttt 3835145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 232 - 342
Target Start/End: Complemental strand, 29035179 - 29035069
Alignment:
Q  232 ttaattacacttttggtcctcgtgtattggcctactcacgaaactagtcctacccttttaaaacagaacaaaacggtccttcaattatcatttttgttgc 331  Q
    |||||||||||||| |||||||||| || |||||||||||||| | ||  | |||||||||||||||||||||  |||||| | ||||||||||||||||    
T  29035179 ttaattacacttttcgtcctcgtgttttagcctactcacgaaattggttatgcccttttaaaacagaacaaaattgtcctttagttatcatttttgttgc 29035080  T
Q  332 atttttcgtcc 342  Q
    |||||||||||    
T  29035079 atttttcgtcc 29035069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 227 - 346
Target Start/End: Original strand, 18296143 - 18296262
Alignment:
Q  227 taggtttaattacacttttggtcctcgtgtattggcctactcacgaaactagtcctacccttttaaaacagaacaaaacggtccttcaattatcattttt 326  Q
    |||| ||||||| | |||| |||||||||| ||| | ||||||| ||| |  |  | |||||||||||||||||||||| |||||||| |||||||||||    
T  18296143 taggcttaattataattttagtcctcgtgttttgacttactcacaaaattgatattgcccttttaaaacagaacaaaaccgtccttcatttatcattttt 18296242  T
Q  327 gttgcatttttcgtcctacc 346  Q
    ||||||||||||||||||||    
T  18296243 gttgcatttttcgtcctacc 18296262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 322 - 392
Target Start/End: Complemental strand, 35163639 - 35163570
Alignment:
Q  322 tttttgttgcatttttcgtcctacctcctattttcaaactccagaaatgtagagaaatgacagttttaggc 392  Q
    ||||| ||||| |||| |||||||||||||||||| ||||||| |||   |||||||||||||||||||||    
T  35163639 ttttttttgcagttttagtcctacctcctattttc-aactccaaaaacacagagaaatgacagttttaggc 35163570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 175 - 228
Target Start/End: Original strand, 11083924 - 11083977
Alignment:
Q  175 gaccactctaaaactaatttttaccttattacaaatcagtcctcatataaaata 228  Q
    |||||||||||||||||  |||| ||||||||||||||||||| ||| ||||||    
T  11083924 gaccactctaaaactaagctttatcttattacaaatcagtccttatacaaaata 11083977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 175 - 226
Target Start/End: Original strand, 4487825 - 4487876
Alignment:
Q  175 gaccactctaaaactaatttttaccttattacaaatcagtcctcatataaaa 226  Q
    ||||||| ||| ||||| |||||| |||||||||||||||||||||| ||||    
T  4487825 gaccactgtaacactaaattttactttattacaaatcagtcctcatacaaaa 4487876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 170 - 228
Target Start/End: Complemental strand, 4104300 - 4104242
Alignment:
Q  170 tggtcgaccactctaaaactaatttttaccttattacaaatcagtcctcatataaaata 228  Q
    |||| |||||||||||||||||  ||| ||||||||||||||| || ||||| ||||||    
T  4104300 tggtggaccactctaaaactaaactttgccttattacaaatcaatcttcatacaaaata 4104242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 175 - 228
Target Start/End: Complemental strand, 25441766 - 25441713
Alignment:
Q  175 gaccactctaaaactaatttttaccttattacaaatcagtcctcatataaaata 228  Q
    ||||||| ||| ||||| |||||| |||| ||||||||||||||||| ||||||    
T  25441766 gaccactgtaacactaaattttactttatcacaaatcagtcctcatacaaaata 25441713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 342 - 409
Target Start/End: Original strand, 32836114 - 32836180
Alignment:
Q  342 ctacctcctattttcaaactccagaaatgtagagaaatgacagttttaggcggntttagacctaccct 409  Q
    ||||||||||||||||| |||| ||||   ||||||||||||||||||| |   ||||||||||||||    
T  32836114 ctacctcctattttcaa-ctcctgaaacacagagaaatgacagttttagacaattttagacctaccct 32836180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 297 - 357
Target Start/End: Original strand, 33095782 - 33095842
Alignment:
Q  297 gaacaaaacggtccttcaattatcatttttgttgcatttttcgtcctacctcctattttca 357  Q
    ||||||||| |||| | || |||||| ||| ||||| |||| |||||||||||||||||||    
T  33095782 gaacaaaaccgtccctaaactatcatgttttttgcagttttagtcctacctcctattttca 33095842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 147; Significance: 2e-77; HSPs: 76)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 147; E-Value: 2e-77
Query Start/End: Original strand, 232 - 413
Target Start/End: Complemental strand, 37727472 - 37727291
Alignment:
Q  232 ttaattacacttttggtcctcgtgtattggcctactcacgaaactagtcctacccttttaaaacagaacaaaacggtccttcaattatcatttttgttgc 331  Q
    ||||||||||||||||||||| ||| ||||||||||||||||||| ||||| | ||||||||||||||||||||||||||||||||||||||||||||||    
T  37727472 ttaattacacttttggtcctcatgttttggcctactcacgaaactggtcctgctcttttaaaacagaacaaaacggtccttcaattatcatttttgttgc 37727373  T
Q  332 atttttcgtcctacctcctattttcaaactccagaaatgtagagaaatgacagttttaggcggntttagacctacccttatg 413  Q
    ||||||||||||||||||||||||||||||||||||| | ||||||||||||||||||||||| ||||||||||||| ||||    
T  37727372 atttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagttttaggcggttttagacctacccctatg 37727291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 143; E-Value: 5e-75
Query Start/End: Original strand, 232 - 409
Target Start/End: Original strand, 39555581 - 39555758
Alignment:
Q  232 ttaattacacttttggtcctcgtgtattggcctactcacgaaactagtcctacccttttaaaacagaacaaaacggtccttcaattatcatttttgttgc 331  Q
    ||||||||||||||||||||||||| ||||||||||||||||||| ||||| || |||||||||||||||||| ||||||||||||||||||||||||||    
T  39555581 ttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgccattttaaaacagaacaaaatggtccttcaattatcatttttgttgc 39555680  T
Q  332 atttttcgtcctacctcctattttcaaactccagaaatgtagagaaatgacagttttaggcggntttagacctaccct 409  Q
    ||||||||| ||||||||||||||||||||||||||| | ||||||||||||||||||||||| ||||||||||||||    
T  39555681 atttttcgttctacctcctattttcaaactccagaaacgcagagaaatgacagttttaggcggttttagacctaccct 39555758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 140; E-Value: 3e-73
Query Start/End: Original strand, 227 - 413
Target Start/End: Original strand, 17464489 - 17464675
Alignment:
Q  227 taggtttaattacacttttggtcctcgtgtattggcctactcacgaaactagtcctacccttttaaaacagaacaaaacggtccttcaattatcattttt 326  Q
    |||| ||||||||||||||||||||||||| |||||||| || ||||||| ||| | |||||||||||||||||||||||||||||||||||||||||||    
T  17464489 taggcttaattacacttttggtcctcgtgttttggcctattcgcgaaactggtcatgcccttttaaaacagaacaaaacggtccttcaattatcattttt 17464588  T
Q  327 gttgcatttttcgtcctacctcctattttcaaactccagaaatgtagagaaatgacagttttaggcggntttagacctacccttatg 413  Q
    |||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||||  |||||||||||| ||||    
T  17464589 gttgcatttttcgtcctacctcctattttcaaactccagaaacgtaaagaaatgacagttttaggcggtgttagacctacccctatg 17464675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 139; E-Value: 1e-72
Query Start/End: Original strand, 232 - 413
Target Start/End: Original strand, 31778656 - 31778837
Alignment:
Q  232 ttaattacacttttggtcctcgtgtattggcctactcacgaaactagtcctacccttttaaaacagaacaaaacggtccttcaattatcatttttgttgc 331  Q
    ||||||||||||||||||||||||| |||| ||||||| |||||| ||||| ||||||||||||||||||||||||||||||  ||||||||||||||||    
T  31778656 ttaattacacttttggtcctcgtgttttggtctactcatgaaactggtcctgcccttttaaaacagaacaaaacggtccttcgtttatcatttttgttgc 31778755  T
Q  332 atttttcgtcctacctcctattttcaaactccagaaatgtagagaaatgacagttttaggcggntttagacctacccttatg 413  Q
    ||||||||||||||||||||||||||||||||||||| | ||||||||||||||||||||||| ||||||||||||| ||||    
T  31778756 atttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagttttaggcggttttagacctacccgtatg 31778837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 138; E-Value: 5e-72
Query Start/End: Original strand, 217 - 413
Target Start/End: Original strand, 26837348 - 26837544
Alignment:
Q  217 tcatataaaataggtttaattacacttttggtcctcgtgtattggcctactcacgaaactagtcctacccttttaaaacagaacaaaacggtccttcaat 316  Q
    ||||| |||||||||||||||||| |||||||||| || | ||||||||||||||||| | ||||| |||||||| |||| ||| |||||||||||||||    
T  26837348 tcatagaaaataggtttaattacatttttggtccttgtattttggcctactcacgaaattggtcctgcccttttataacataacgaaacggtccttcaat 26837447  T
Q  317 tatcatttttgttgcatttttcgtcctacctcctattttcaaactccagaaatgtagagaaatgacagttttaggcggntttagacctacccttatg 413  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||||||||||||||||| |||||||||||| |||||    
T  26837448 tatcatttttgttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagttttaggcggttttagacctacctttatg 26837544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 137; E-Value: 2e-71
Query Start/End: Original strand, 226 - 413
Target Start/End: Complemental strand, 4275912 - 4275725
Alignment:
Q  226 ataggtttaattacacttttggtcctcgtgtattggcctactcacgaaactagtcctacccttttaaaacagaacaaaacggtccttcaattatcatttt 325  Q
    ||||| ||||||||||||||||||||||||| ||||||||||||||||||| ||| | | ||||||||||||||||||||||||||| ||||||||||||    
T  4275912 ataggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcatgctcttttaaaacagaacaaaacggtcctttaattatcatttt 4275813  T
Q  326 tgttgcatttttcgtcctacctcctattttcaaactccagaaatgtagagaaatgacagttttaggcggntttagacctacccttatg 413  Q
    ||||||||||||||||||||||||||||||||||||||| ||| | ||||||||| ||||||||||||| ||||||||||||| ||||    
T  4275812 tgttgcatttttcgtcctacctcctattttcaaactccataaacgcagagaaatggcagttttaggcggttttagacctacccctatg 4275725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 136; E-Value: 8e-71
Query Start/End: Original strand, 227 - 413
Target Start/End: Original strand, 22424812 - 22424998
Alignment:
Q  227 taggtttaattacacttttggtcctcgtgtattggcctactcacgaaactagtcctacccttttaaaacagaacaaaacggtccttcaattatcattttt 326  Q
    |||| ||||||||||||||||| ||||||| |  ||||||| |||||||| || ||  ||||||||||||||||||||||||||||||||||||||||||    
T  22424812 taggcttaattacacttttggttctcgtgtttaagcctacttacgaaactggttctgtccttttaaaacagaacaaaacggtccttcaattatcattttt 22424911  T
Q  327 gttgcatttttcgtcctacctcctattttcaaactccagaaatgtagagaaatgacagttttaggcggntttagacctacccttatg 413  Q
    |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||| ||||    
T  22424912 gttgcatttttcgtcctacctcctattttcaaactccagaaatgcagagaaatgacagttttaggcggttttagacctacccctatg 22424998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 136; E-Value: 8e-71
Query Start/End: Original strand, 227 - 413
Target Start/End: Complemental strand, 43973987 - 43973801
Alignment:
Q  227 taggtttaattacacttttggtcctcgtgtattggcctactcacgaaactagtcctacccttttaaaacagaacaaaacggtccttcaattatcattttt 326  Q
    |||| ||||||||||||||||||||||||| ||||||||||||||||||| || || |||||||||||||||||||||||||| ||||||||||||||||    
T  43973987 taggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggttctgcccttttaaaacagaacaaaacggtcattcaattatcattttt 43973888  T
Q  327 gttgcatttttcgtcctacctcctattttcaaactccagaaatgtagagaaatgacagttttaggcggntttagacctacccttatg 413  Q
    ||||||||||||||||||||||||||||||| || ||||||| | ||||||||||||||||||||| | ||||||||||||| ||||    
T  43973887 gttgcatttttcgtcctacctcctattttcataccccagaaacgcagagaaatgacagttttaggcagttttagacctacccctatg 43973801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 131; E-Value: 8e-68
Query Start/End: Original strand, 227 - 408
Target Start/End: Complemental strand, 5137528 - 5137347
Alignment:
Q  227 taggtttaattacacttttggtcctcgtgtattggcctactcacgaaactagtcctacccttttaaaacagaacaaaacggtccttcaattatcattttt 326  Q
    |||| ||||||||||||||||||||||||| |||||||||||| |||||| || || ||||||||||| ||||||||| |||||||||||||||||||||    
T  5137528 taggcttaattacacttttggtcctcgtgttttggcctactcatgaaactggttctgcccttttaaaatagaacaaaatggtccttcaattatcattttt 5137429  T
Q  327 gttgcatttttcgtcctacctcctattttcaaactccagaaatgtagagaaatgacagttttaggcggntttagacctaccc 408  Q
    ||||||||||| |||||| ||||||||||||||||||||||| | ||||||||||||||||||||||| |||||||||||||    
T  5137428 gttgcatttttagtcctatctcctattttcaaactccagaaacgcagagaaatgacagttttaggcggttttagacctaccc 5137347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 131; E-Value: 8e-68
Query Start/End: Original strand, 232 - 401
Target Start/End: Complemental strand, 20841103 - 20840934
Alignment:
Q  232 ttaattacacttttggtcctcgtgtattggcctactcacgaaactagtcctacccttttaaaacagaacaaaacggtccttcaattatcatttttgttgc 331  Q
    ||||||||||||||||| ||||||| ||||||||||||||||||| ||||| || |||||||||||||||||||||||||||||||||||||||||||||    
T  20841103 ttaattacacttttggtgctcgtgttttggcctactcacgaaactggtcctgcctttttaaaacagaacaaaacggtccttcaattatcatttttgttgc 20841004  T
Q  332 atttttcgtcctacctcctattttcaaactccagaaatgtagagaaatgacagttttaggcggntttaga 401  Q
    ||||||||||||||||||||||||||||||||| ||| | ||||||||| ||||||||||||| ||||||    
T  20841003 atttttcgtcctacctcctattttcaaactccataaacgcagagaaatggcagttttaggcggttttaga 20840934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 131; E-Value: 8e-68
Query Start/End: Original strand, 232 - 405
Target Start/End: Complemental strand, 23645007 - 23644834
Alignment:
Q  232 ttaattacacttttggtcctcgtgtattggcctactcacgaaactagtcctacccttttaaaacagaacaaaacggtccttcaattatcatttttgttgc 331  Q
    ||||||| ||||||||||||||||| ||||||||||||||||| | |||||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  23645007 ttaattatacttttggtcctcgtgttttggcctactcacgaaattggtcctacccttttaaaacagaacaaaacggtcattcaattatcatttttgttgc 23644908  T
Q  332 atttttcgtcctacctcctattttcaaactccagaaatgtagagaaatgacagttttaggcggntttagaccta 405  Q
    ||||||| ||||||||||||||||||||||| || || | ||||||||||||||||||||||| ||||||||||    
T  23644907 atttttcatcctacctcctattttcaaactctagtaacgcagagaaatgacagttttaggcggttttagaccta 23644834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 131; E-Value: 8e-68
Query Start/End: Original strand, 232 - 405
Target Start/End: Original strand, 25853237 - 25853410
Alignment:
Q  232 ttaattacacttttggtcctcgtgtattggcctactcacgaaactagtcctacccttttaaaacagaacaaaacggtccttcaattatcatttttgttgc 331  Q
    ||||||||||||||||||||||||| ||||||||||||||||| | ||| | ||||||||||| ||||||||||||||||||||||||||||||||||||    
T  25853237 ttaattacacttttggtcctcgtgttttggcctactcacgaaattggtcatgcccttttaaaatagaacaaaacggtccttcaattatcatttttgttgc 25853336  T
Q  332 atttttcgtcctacctcctattttcaaactccagaaatgtagagaaatgacagttttaggcggntttagaccta 405  Q
    ||||||||| ||||||||||||||||||||||||||| | |||||||| |||||||||||||| ||||||||||    
T  25853337 atttttcgttctacctcctattttcaaactccagaaacgcagagaaataacagttttaggcggttttagaccta 25853410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 131; E-Value: 8e-68
Query Start/End: Original strand, 232 - 413
Target Start/End: Original strand, 27393664 - 27393845
Alignment:
Q  232 ttaattacacttttggtcctcgtgtattggcctactcacgaaactagtcctacccttttaaaacagaacaaaacggtccttcaattatcatttttgttgc 331  Q
    ||||||||||||||||||||||||| ||| ||||||||| ||||| ||||| || |||||||||||||||||||||||||||||||||||||||||||||    
T  27393664 ttaattacacttttggtcctcgtgttttgacctactcacaaaactggtcctgccattttaaaacagaacaaaacggtccttcaattatcatttttgttgc 27393763  T
Q  332 atttttcgtcctacctcctattttcaaactccagaaatgtagagaaatgacagttttaggcggntttagacctacccttatg 413  Q
    ||||||||||||||| ||||||||||||| ||||||| | ||||||||||||||||||||| | ||||||||||||| ||||    
T  27393764 atttttcgtcctaccccctattttcaaaccccagaaacgcagagaaatgacagttttaggcagttttagacctacccctatg 27393845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 130; E-Value: 3e-67
Query Start/End: Original strand, 227 - 407
Target Start/End: Complemental strand, 29801963 - 29801783
Alignment:
Q  227 taggtttaattacacttttggtcctcgtgtattggcctactcacgaaactagtcctacccttttaaaacagaacaaaacggtccttcaattatcattttt 326  Q
    |||| ||||||||||||||| ||||||| | ||||||||||||||||||| ||||| |||||||||||||||||||||||||| ||||||||||||||||    
T  29801963 taggcttaattacacttttgatcctcgtattttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtctttcaattatcattttt 29801864  T
Q  327 gttgcatttttcgtcctacctcctattttcaaactccagaaatgtagagaaatgacagttttaggcggntttagacctacc 407  Q
    |||||||||||||||| ||||||||||||||||||||||||| | |||||||||||| |||||| ||| ||||||||||||    
T  29801863 gttgcatttttcgtcccacctcctattttcaaactccagaaacgcagagaaatgacaattttagacggttttagacctacc 29801783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 128; E-Value: 5e-66
Query Start/End: Original strand, 223 - 413
Target Start/End: Original strand, 32534953 - 32535143
Alignment:
Q  223 aaaataggtttaattacacttttggtcctcgtgtattggcctactcacgaaactagtcctacccttttaaaacagaacaaaacggtccttcaattatcat 322  Q
    |||| ||||||||||||||||||||||||||||| ||||| ||||||||||| | ||||| || ||||||||||||||||||||||||||||||||||||    
T  32534953 aaaaaaggtttaattacacttttggtcctcgtgttttggcatactcacgaaattggtcctgcctttttaaaacagaacaaaacggtccttcaattatcat 32535052  T
Q  323 ttttgttgcatttttcgtcctacctcctattttcaaactccagaaatgtagagaaatgacagttttaggcggntttagacctacccttatg 413  Q
    |||||||||||||||||||||||||||||||||||||||| ||||    ||||||||||||||||||||||| |||| |||| ||| ||||    
T  32535053 ttttgttgcatttttcgtcctacctcctattttcaaactctagaatcacagagaaatgacagttttaggcggttttataccttcccctatg 32535143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 123; E-Value: 5e-63
Query Start/End: Original strand, 232 - 401
Target Start/End: Complemental strand, 30098305 - 30098136
Alignment:
Q  232 ttaattacacttttggtcctcgtgtattggcctactcacgaaactagtcctacccttttaaaacagaacaaaacggtccttcaattatcatttttgttgc 331  Q
    ||||||||||||||||||||||||| ||| | ||||||||||||| ||| | ||||||||||||||||||||| ||||||||||||||||||||||||||    
T  30098305 ttaattacacttttggtcctcgtgttttgacatactcacgaaactggtcttgcccttttaaaacagaacaaaatggtccttcaattatcatttttgttgc 30098206  T
Q  332 atttttcgtcctacctcctattttcaaactccagaaatgtagagaaatgacagttttaggcggntttaga 401  Q
    |||||||||||||||||||||||||||||| |||||| | ||||| ||||||||||||||||| ||||||    
T  30098205 atttttcgtcctacctcctattttcaaacttcagaaacgcagagatatgacagttttaggcggttttaga 30098136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 121; E-Value: 7e-62
Query Start/End: Original strand, 218 - 413
Target Start/End: Original strand, 24300546 - 24300740
Alignment:
Q  218 catataaaataggtttaattacacttttggtcctcgtgtattggcctactcacgaaactagtcctacccttttaaaacagaacaaaacggtccttcaatt 317  Q
    |||| |||| ||||||||||||| |||||||| |||||| ||||| || |||||||||| |||||  ||||||||||||||| |||||||| ||||||||    
T  24300546 cataaaaaaaaggtttaattacatttttggtc-tcgtgttttggcttattcacgaaactggtcctgtccttttaaaacagaataaaacggttcttcaatt 24300644  T
Q  318 atcatttttgttgcatttttcgtcctacctcctattttcaaactccagaaatgtagagaaatgacagttttaggcggntttagacctacccttatg 413  Q
    ||||||||||||||| ||||||||| ||||||||||||||||||||||||| | ||||||||||||||||||||||| ||||||||||||| ||||    
T  24300645 atcatttttgttgcaattttcgtcccacctcctattttcaaactccagaaacgcagagaaatgacagttttaggcggttttagacctacccatatg 24300740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 120; E-Value: 3e-61
Query Start/End: Original strand, 228 - 406
Target Start/End: Original strand, 26274566 - 26274744
Alignment:
Q  228 aggtttaattacacttttggtcctcgtgtattggcctactcacgaaactagtcctacccttttaaaacagaacaaaacggtccttcaattatcatttttg 327  Q
    ||||||||||||| ||||| |||| || | |||| |||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  26274566 aggtttaattacatttttgatccttgtattttggactactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttg 26274665  T
Q  328 ttgcatttttcgtcctacctcctattttcaaactccagaaatgtagagaaatgacagttttaggcggntttagacctac 406  Q
    |||||||||||||| |||||||||||||||||||||||||| | ||  ||||||||||||||||| | |||||||||||    
T  26274666 ttgcatttttcgtcatacctcctattttcaaactccagaaacgcagttaaatgacagttttaggcagttttagacctac 26274744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 115; E-Value: 3e-58
Query Start/End: Original strand, 228 - 413
Target Start/End: Complemental strand, 41047243 - 41047060
Alignment:
Q  228 aggtttaattacacttttggtcctcgtgtattggcctactcacgaaactagtcctacccttttaaaacagaacaaaacggtccttcaattatcatttttg 327  Q
    ||||||||||||||||| | || || ||| ||||||||||||||||||| || ||  ||||||||||||||| |||||| ||||||||||||||||||||    
T  41047243 aggtttaattacactttcg-tcttcatgttttggcctactcacgaaactggttctgtccttttaaaacagaataaaacg-tccttcaattatcatttttg 41047146  T
Q  328 ttgcatttttcgtcctacctcctattttcaaactccagaaatgtagagaaatgacagttttaggcggntttagacctacccttatg 413  Q
    ||||||||||||||||||||||||||||||||||||||||| | ||||||||| ||||||||||||| ||||||||||||| ||||    
T  41047145 ttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatggcagttttaggcggttttagacctacccatatg 41047060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 106; E-Value: 7e-53
Query Start/End: Original strand, 225 - 390
Target Start/End: Original strand, 5136976 - 5137140
Alignment:
Q  225 aataggtttaattacacttttggtcctcgtgtattggcctactcacgaaactagtcctacccttttaaaacagaacaaaacggtccttcaattatcattt 324  Q
    |||||||||||||||||||||||||||||||| |||||| |||||||||| | ||| | |||||||||||||||||||||||||||||||||||||||||    
T  5136976 aataggtttaattacacttttggtcctcgtgttttggccaactcacgaaattggtcatgcccttttaaaacagaacaaaacggtccttcaattatcattt 5137075  T
Q  325 ttgttgcatttttcgtcctacctcctattttcaaactccagaaatgtagagaaatgacagttttag 390  Q
    |||||||||||||||||||||| || ||||| |  ||||| ||| | |||||||||||||||||||    
T  5137076 ttgttgcatttttcgtcctaccccccatttt-attctccaaaaacgcagagaaatgacagttttag 5137140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 106; E-Value: 7e-53
Query Start/End: Original strand, 225 - 390
Target Start/End: Complemental strand, 31779201 - 31779037
Alignment:
Q  225 aataggtttaattacacttttggtcctcgtgtattggcctactcacgaaactagtcctacccttttaaaacagaacaaaacggtccttcaattatcattt 324  Q
    |||||| ||||||||||||||||||||||||| ||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||    
T  31779201 aataggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattt 31779102  T
Q  325 ttgttgcatttttcgtcctacctcctattttcaaactccagaaatgtagagaaatgacagttttag 390  Q
    |||||||||||||||||| ||| || ||||| |  ||||| ||| | ||||||||| |||||||||    
T  31779101 ttgttgcatttttcgtcccaccccccatttt-attctccaaaaacgcagagaaatgtcagttttag 31779037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 103; E-Value: 4e-51
Query Start/End: Original strand, 232 - 390
Target Start/End: Complemental strand, 39556119 - 39555962
Alignment:
Q  232 ttaattacacttttggtcctcgtgtattggcctactcacgaaactagtcctacccttttaaaacagaacaaaacggtccttcaattatcatttttgttgc 331  Q
    ||||||||||||||||||||||||| ||||||||||||||||||| ||||| ||||||||||||||||||||| |||||||||||||||||||| |||||    
T  39556119 ttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaatggtccttcaattatcattttcgttgc 39556020  T
Q  332 atttttcgtcctacctcctattttcaaactccagaaatgtagagaaatgacagttttag 390  Q
    ||||||||||||||| || ||||| |  ||||| ||| | |||||||||||||||||||    
T  39556019 atttttcgtcctaccccccatttt-attctccaaaaacgcagagaaatgacagttttag 39555962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 229 - 390
Target Start/End: Original strand, 41046700 - 41046860
Alignment:
Q  229 ggtttaattacacttttggtcctcgtgtattggcctactcacgaaactagtcctacccttttaaaacagaacaaaacggtccttcaattatcatttttgt 328  Q
    |||||||||||||||||||||||||||| |||||||| | |||||||| ||| | |||||||||||||||||||||||||||||||||||||||||||||    
T  41046700 ggtttaattacacttttggtcctcgtgttttggcctaattacgaaactggtcatgcccttttaaaacagaacaaaacggtccttcaattatcatttttgt 41046799  T
Q  329 tgcatttttcgtcctacctcctattttcaaactccagaaatgtagagaaatgacagttttag 390  Q
    |||||||||||||||||| || ||||| |  ||||| ||| | |||||||||||||||||||    
T  41046800 tgcatttttcgtcctaccccccatttt-attctccaaaaacgcagagaaatgacagttttag 41046860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 100; E-Value: 3e-49
Query Start/End: Original strand, 227 - 390
Target Start/End: Original strand, 20840558 - 20840720
Alignment:
Q  227 taggtttaattacacttttggtcctcgtgtattggcctactcacgaaactagtcctacccttttaaaacagaacaaaacggtccttcaattatcattttt 326  Q
    |||| ||||||||||||||||||||||||| ||||||||||||||||||| ||||| || |||||||| |||||||||||||||||||||||||||||||    
T  20840558 taggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcctttttaaaatagaacaaaacggtccttcaattatcattttt 20840657  T
Q  327 gttgcatttttcgtcctacctcctattttcaaactccagaaatgtagagaaatgacagttttag 390  Q
    |||||||||||||||||||| || ||||| |  ||||  ||| | |||||||||||||||||||    
T  20840658 gttgcatttttcgtcctaccccccatttt-attctccttaaacgcagagaaatgacagttttag 20840720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 235 - 385
Target Start/End: Original strand, 48452995 - 48453144
Alignment:
Q  235 attacacttttggtcctcgtgtattggcctactcacgaaactagtcctacccttttaaaacagaacaaaacggtccttcaattatcatttttgttgcatt 334  Q
    ||||||||||||||| |||||| ||||||||||||||||||| ||||| || ||||||||||||||||||||||||||||||||||||||||||||||||    
T  48452995 attacacttttggtcatcgtgttttggcctactcacgaaactggtcctgccattttaaaacagaacaaaacggtccttcaattatcatttttgttgcatt 48453094  T
Q  335 tttcgtcctacctcctattttcaaactccagaaatgtagagaaatgacagt 385  Q
    |||||||||||| || ||||| |  ||||| ||| | ||||||||||||||    
T  48453095 tttcgtcctaccccccatttt-attctccaaaaacgcagagaaatgacagt 48453144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 227 - 390
Target Start/End: Complemental strand, 24301103 - 24300941
Alignment:
Q  227 taggtttaattacacttttggtcctcgtgtattggcctactcacgaaactagtcctacccttttaaaacagaacaaaacggtccttcaattatcattttt 326  Q
    |||| ||||||||||||||||||||||||| ||||||||||||||||| | ||||| || |||||||||| |||||||||||||||| | ||||||||||    
T  24301103 taggcttaattacacttttggtcctcgtgttttggcctactcacgaaattggtcctgccattttaaaacaaaacaaaacggtccttcgagtatcattttt 24301004  T
Q  327 gttgcatttttcgtcctacctcctattttcaaactccagaaatgtagagaaatgacagttttag 390  Q
    |||||||||||||||||||| || ||||| |  ||||| ||| | |||||||||||||||||||    
T  24301003 gttgcatttttcgtcctaccccccatttt-attctccaaaaacgcagagaaatgacagttttag 24300941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 223 - 390
Target Start/End: Original strand, 37726923 - 37727089
Alignment:
Q  223 aaaataggtttaattacacttttggtcctcgtgtattggcctactcacgaaactagtcctacccttttaaaacagaacaaaacggtccttcaattatcat 322  Q
    |||| ||| ||||||||||||||||||||||||| |||| || || |||||||| || || ||||||||||||| |||||||||||||||||||||||||    
T  37726923 aaaaaaggcttaattacacttttggtcctcgtgttttggtctgcttacgaaactggttctgcccttttaaaacataacaaaacggtccttcaattatcat 37727022  T
Q  323 ttttgttgcatttttcgtcctacctcctattttcaaactccagaaatgtagagaaatgacagttttag 390  Q
    |||||||||||||||||||||||| || ||||| |  ||||| ||| | |||||||||||||||||||    
T  37727023 ttttgttgcatttttcgtcctaccccccatttt-attctccaaaaacgcagagaaatgacagttttag 37727089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 89; E-Value: 9e-43
Query Start/End: Original strand, 223 - 355
Target Start/End: Original strand, 23644456 - 23644588
Alignment:
Q  223 aaaataggtttaattacacttttggtcctcgtgtattggcctactcacgaaactagtcctacccttttaaaacagaacaaaacggtccttcaattatcat 322  Q
    |||| ||| ||||||||||||||||||||||| | ||||||||||||||||| | ||||| || ||||||||||||||||||| ||||||||||||||||    
T  23644456 aaaaaaggcttaattacacttttggtcctcgtattttggcctactcacgaaattggtcctgccattttaaaacagaacaaaacagtccttcaattatcat 23644555  T
Q  323 ttttgttgcatttttcgtcctacctcctatttt 355  Q
    |||||||||||||||||||||||| || |||||    
T  23644556 ttttgttgcatttttcgtcctaccccccatttt 23644588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 232 - 346
Target Start/End: Complemental strand, 32535505 - 32535386
Alignment:
Q  232 ttaattacacttttggtcctcgtgtattggcctactcacgaaactagtcctacccttttaaaacagaacaaaacggtccttcaattatc-----attttt 326  Q
    ||||||||||||||||||||||||| ||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||     ||||||    
T  32535505 ttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattaaattttt 32535406  T
Q  327 gttgcatttttcgtcctacc 346  Q
    ||||||||||||||||||||    
T  32535405 gttgcatttttcgtcctacc 32535386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 84; E-Value: 9e-40
Query Start/End: Original strand, 232 - 390
Target Start/End: Complemental strand, 17465034 - 17464876
Alignment:
Q  232 ttaattacacttttggtcctcgtgtattggcctactcacgaaactagtcctacccttttaaaacagaacaaaacggtccttcaattatcatttttgttgc 331  Q
    ||||||||| ||||||||||||||| ||||||||| || |||||| |||  |||||||||||| ||||||||||||||||||||||||||||||||||||    
T  17465034 ttaattacatttttggtcctcgtgttttggcctacgcatgaaactggtctgacccttttaaaatagaacaaaacggtccttcaattatcatttttgttgc 17464935  T
Q  332 at-ttttcgtcctacctcctattttcaaactccagaaatgtagagaaatgacagttttag 390  Q
    || |||| |||||||| || ||||| |  ||||| ||||| |||||||||||||||||||    
T  17464934 atttttttgtcctaccccccatttt-attctccaaaaatgcagagaaatgacagttttag 17464876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 84; E-Value: 9e-40
Query Start/End: Original strand, 227 - 390
Target Start/End: Complemental strand, 26837902 - 26837741
Alignment:
Q  227 taggtttaattacacttttggtcctcgtgtattggcctactcacgaaactagtcctacccttttaaaacagaacaaaacggtccttcaattatcattttt 326  Q
    |||| ||||||||||||||||||||||||| |||||||||| |||||||| || || |||||| |||| |||||||||||||| ||||| ||||||||||    
T  26837902 taggcttaattacacttttggtcctcgtgttttggcctacttacgaaactggttctgcccttt-aaaatagaacaaaacggtcattcaagtatcattttt 26837804  T
Q  327 gttgcatttttcgtcctacctcctattttcaaactccagaaatgtagagaaatgacagttttag 390  Q
    ||||||||||| |||||||| || ||||| |  ||||| ||||| |||||||||||||||||||    
T  26837803 gttgcattttttgtcctaccccccatttt-attctccaaaaatgcagagaaatgacagttttag 26837741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 84; E-Value: 9e-40
Query Start/End: Original strand, 227 - 346
Target Start/End: Original strand, 30104480 - 30104599
Alignment:
Q  227 taggtttaattacacttttggtcctcgtgtattggcctactcacgaaactagtcctacccttttaaaacagaacaaaacggtccttcaattatcattttt 326  Q
    |||| ||||||||||||||||||||||||| ||| ||||||||||||| | ||||| ||||||||||||| || | ||||||||||||||||||||||||    
T  30104480 taggcttaattacacttttggtcctcgtgttttgacctactcacgaaattggtcctgcccttttaaaacaaaatagaacggtccttcaattatcattttt 30104579  T
Q  327 gttgcatttttcgtcctacc 346  Q
    ||||||||||||||||||||    
T  30104580 gttgcatttttcgtcctacc 30104599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 84; E-Value: 9e-40
Query Start/End: Original strand, 232 - 355
Target Start/End: Original strand, 43973444 - 43973567
Alignment:
Q  232 ttaattacacttttggtcctcgtgtattggcctactcacgaaactagtcctacccttttaaaacagaacaaaacggtccttcaattatcatttttgttgc 331  Q
    ||||||||||||||||||||||||| ||| ||||||||||||| |  |  | ||||||||||||||||||||||||||||||||||||||||||||||||    
T  43973444 ttaattacacttttggtcctcgtgttttgtcctactcacgaaaatgattatgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgc 43973543  T
Q  332 atttttcgtcctacctcctatttt 355  Q
    ||||||||||||||| || |||||    
T  43973544 atttttcgtcctaccccccatttt 43973567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 233 - 355
Target Start/End: Complemental strand, 22425354 - 22425232
Alignment:
Q  233 taattacacttttggtcctcgtgtattggcctactcacgaaactagtcctacccttttaaaacagaacaaaacggtccttcaattatcatttttgttgca 332  Q
    |||||||||||||||||||||||| | |||||||||||||| || ||| | ||||| ||||||||||||||||||| |||||||||||||||||||||||    
T  22425354 taattacacttttggtcctcgtgtttcggcctactcacgaatctggtcatgcccttgtaaaacagaacaaaacggtacttcaattatcatttttgttgca 22425255  T
Q  333 tttttcgtcctacctcctatttt 355  Q
    |||||||||||||| || |||||    
T  22425254 tttttcgtcctaccccccatttt 22425232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 229 - 355
Target Start/End: Complemental strand, 25612522 - 25612396
Alignment:
Q  229 ggtttaattacacttttggtcctcgtgtattggcctactcacgaaactagtcctacccttttaaaacagaacaaaacggtccttcaattatcatttttgt 328  Q
    |||||||||||||||||||||||||||| ||| ||||||||||||| | ||||| ||||||||||| |||||||||| ||| || |||||||||||||||    
T  25612522 ggtttaattacacttttggtcctcgtgttttgacctactcacgaaattggtcctgcccttttaaaatagaacaaaactgtcttttaattatcatttttgt 25612423  T
Q  329 tgcatttttcgtcctacctcctatttt 355  Q
    |||||||||||||||||| || |||||    
T  25612422 tgcatttttcgtcctaccccccatttt 25612396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 232 - 390
Target Start/End: Complemental strand, 27394119 - 27393962
Alignment:
Q  232 ttaattacacttttggtcctcgtgtattggcctactcacgaaactagtcctacccttttaaaacagaacaaaacggtccttcaattatcatttttgttgc 331  Q
    ||||||||||||||||||||||||| |||||||||||||||||   ||||| || |||||||||||||||||||| ||||||||||||||||||||||||    
T  27394119 ttaattacacttttggtcctcgtgttttggcctactcacgaaataggtcctgcctttttaaaacagaacaaaacgatccttcaattatcatttttgttgc 27394020  T
Q  332 atttttcgtcctacctcctattttcaaactccagaaatgtagagaaatgacagttttag 390  Q
    ||||| | ||||||| || ||||| |  ||||| ||| | |||||||| ||||||||||    
T  27394019 attttccatcctacccccaatttt-attctccaaaaacgcagagaaataacagttttag 27393962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 232 - 346
Target Start/End: Original strand, 29801359 - 29801473
Alignment:
Q  232 ttaattacacttttggtcctcgtgtattggcctactcacgaaactagtcctacccttttaaaacagaacaaaacggtccttcaattatcatttttgttgc 331  Q
    |||||||||||||||||| |||||| ||||| ||||||| ||||| ||||| |||||||||||||||||||||||||||||||| |||||||||||||||    
T  29801359 ttaattacacttttggtcatcgtgttttggcatactcacaaaactggtcctgcccttttaaaacagaacaaaacggtccttcaagtatcatttttgttgc 29801458  T
Q  332 atttttcgtcctacc 346  Q
    |||||||||| ||||    
T  29801459 atttttcgtcttacc 29801473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 227 - 390
Target Start/End: Complemental strand, 26275113 - 26274952
Alignment:
Q  227 taggtttaattacacttttggtcctcgtgtattggcctactcacgaaactagtcctacccttttaaaacagaacaaaacggtccttcaattatcattttt 326  Q
    |||||||||||| | |||||| ||| |||| ||| ||||||||||||||| |||||||||||||||||||||| |||||||||| |||||||||||||||    
T  26275113 taggtttaattataattttggcccttgtgttttgacctactcacgaaactggtcctacccttttaaaacagaataaaacggtccctcaattatcattttt 26275014  T
Q  327 gttgcatttttcgtcctacctcctattttcaaactccagaaatgtagagaaatgacagttttag 390  Q
    ||||| |||||||||||||| || ||||| |  ||||| ||  | |||||||||||||||||||    
T  26275013 gttgc-tttttcgtcctaccccccatttt-attctccaaaaccgcagagaaatgacagttttag 26274952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 79; E-Value: 9e-37
Query Start/End: Original strand, 232 - 390
Target Start/End: Complemental strand, 25853769 - 25853612
Alignment:
Q  232 ttaattacacttttggtcctcgtgtattggcctactcacgaaactagtcctacccttttaaaacagaacaaaacggtccttcaattatcatttttgttgc 331  Q
    ||||||||||||||| ||||||||| |||  |||||||||||||| ||| |  | |||||||||||||||||| ||||||||||||||||||||||||||    
T  25853769 ttaattacacttttgatcctcgtgttttgctctactcacgaaactggtcttgtcattttaaaacagaacaaaatggtccttcaattatcatttttgttgc 25853670  T
Q  332 atttttcgtcctacctcctattttcaaactccagaaatgtagagaaatgacagttttag 390  Q
    ||||||||||||||| || ||||| |  ||||| ||| | |||||||| ||||||||||    
T  25853669 atttttcgtcctaccccccatttt-attctccaaaaacgcagagaaataacagttttag 25853612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 223 - 355
Target Start/End: Complemental strand, 23228558 - 23228427
Alignment:
Q  223 aaaataggtttaattacacttttggtcctcgtgtattggcctactcacgaaactagtcctacccttttaaaacagaacaaaacggtccttcaattatcat 322  Q
    ||||| || ||||||||||||||||||| ||||| ||||||||||||||||| |  || | |||||||||||| ||||||||  ||||||||||||||||    
T  23228558 aaaattggcttaattacacttttggtccccgtgttttggcctactcacgaaaatgatcatgcccttttaaaac-gaacaaaattgtccttcaattatcat 23228460  T
Q  323 ttttgttgcatttttcgtcctacctcctatttt 355  Q
    |||| |||||||||||||||||||||| |||||    
T  23228459 ttttattgcatttttcgtcctacctcccatttt 23228427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 232 - 346
Target Start/End: Complemental strand, 32697242 - 32697128
Alignment:
Q  232 ttaattacacttttggtcctcgtgtattggcctactcacgaaactagtcctacccttttaaaacagaacaaaacggtccttcaattatcatttttgttgc 331  Q
    ||||||| | ||||||||||||||| || |||||||||||||| |||||   |||||||||||||||||||||  || ||||||||||||||||||||||    
T  32697242 ttaattatatttttggtcctcgtgttttagcctactcacgaaattagtcacgcccttttaaaacagaacaaaattgtgcttcaattatcatttttgttgc 32697143  T
Q  332 atttttcgtcctacc 346  Q
    |||||||||||||||    
T  32697142 atttttcgtcctacc 32697128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 227 - 355
Target Start/End: Complemental strand, 51474881 - 51474753
Alignment:
Q  227 taggtttaattacacttttggtcctcgtgtattggcctactcacgaaactagtcctacccttttaaaacagaacaaaacggtccttcaattatcattttt 326  Q
    |||| ||||||||||||||||| | ||||| ||||| ||||||||||| | ||| | ||||||||||||| |||||||  |||||| | |||||||||||    
T  51474881 taggcttaattacacttttggttcccgtgttttggcatactcacgaaattggtcatgcccttttaaaacataacaaaattgtcctttagttatcattttt 51474782  T
Q  327 gttgcatttttcgtcctacctcctatttt 355  Q
    |||||||||||||||||||| || |||||    
T  51474781 gttgcatttttcgtcctacccccaatttt 51474753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 232 - 355
Target Start/End: Complemental strand, 50116951 - 50116828
Alignment:
Q  232 ttaattacacttttggtcctcgtgtattggcctactcacgaaactagtcctacccttttaaaacagaacaaaacggtccttcaattatcatttttgttgc 331  Q
    ||||||||||||||| ||||||||| ||| | ||||||||||| | ||| | ||||||| ||| |||||||||||||| |||| ||||||||||||||||    
T  50116951 ttaattacacttttgatcctcgtgttttgacttactcacgaaattggtcatgcccttttgaaagagaacaaaacggtcattcagttatcatttttgttgc 50116852  T
Q  332 atttttcgtcctacctcctatttt 355  Q
    | ||||||||||||| || |||||    
T  50116851 aattttcgtcctaccccccatttt 50116828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 232 - 343
Target Start/End: Original strand, 51473431 - 51473542
Alignment:
Q  232 ttaattacacttttggtcctcgtgtattggcctactcacgaaactagtcctacccttttaaaacagaacaaaacggtccttcaattatcatttttgttgc 331  Q
    ||||||||||||||||||||||||| |||| ||| |||||||| | ||||| |||||||||||||||||||||  |||||||  ||||||||||||||||    
T  51473431 ttaattacacttttggtcctcgtgttttggtctattcacgaaattggtcctgcccttttaaaacagaacaaaattgtccttcggttatcatttttgttgc 51473530  T
Q  332 atttttcgtcct 343  Q
    | |||| |||||    
T  51473531 acttttggtcct 51473542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 226 - 340
Target Start/End: Original strand, 45965935 - 45966049
Alignment:
Q  226 ataggtttaattacacttttggtcctcgtgtattggcctactcacgaaactagtcctacccttttaaaacagaacaaaacggtccttcaattatcatttt 325  Q
    ||||| ||||||||||||||||||||||||| ||||| ||||||||||  || |||| | ||||||||||| |||||||  ||||||| ||||||||||     
T  45965935 ataggcttaattacacttttggtcctcgtgttttggcatactcacgaagttaatcctgctcttttaaaacataacaaaaatgtccttcgattatcatttg 45966034  T
Q  326 tgttgcatttttcgt 340  Q
    |||||||||||||||    
T  45966035 tgttgcatttttcgt 45966049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 218 - 315
Target Start/End: Complemental strand, 37222127 - 37222030
Alignment:
Q  218 catataaaataggtttaattacacttttggtcctcgtgtattggcctactcacgaaactagtcctacccttttaaaacagaacaaaacggtccttcaa 315  Q
    ||||||| ||||| ||||||||||||||||||||||||| ||| ||||||||| ||| | ||||| || |||||||||||||||||||  ||||||||    
T  37222127 catataatataggcttaattacacttttggtcctcgtgttttgccctactcacaaaattggtcctgccattttaaaacagaacaaaaccatccttcaa 37222030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 226 - 346
Target Start/End: Original strand, 37220554 - 37220674
Alignment:
Q  226 ataggtttaattacacttttggtcctcgtgtattggcctactcacgaaactagtcctacccttttaaaacagaacaaaacggtccttcaattatcatttt 325  Q
    ||||| ||||||||||||||||||||||| | ||||||||||||| | |    || | | |||||||||||||| ||||  |||||||| ||||||||||    
T  37220554 ataggcttaattacacttttggtcctcgtattttggcctactcacaatatcgatcatgctcttttaaaacagaataaaattgtccttcagttatcatttt 37220653  T
Q  326 tgttgcatttttcgtcctacc 346  Q
    ||||||| |||||||||||||    
T  37220654 tgttgcacttttcgtcctacc 37220674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 235 - 326
Target Start/End: Original strand, 25419150 - 25419242
Alignment:
Q  235 attacacttttggtcctcgtgtattggcctactcacgaaactagtcctacccttttaaaacagaacaaaacggtcc-ttcaattatcattttt 326  Q
    |||| |||||||||| |||||| || || ||||||||||| |||| || |||||||||||||||||||||| |||| ||||||||||||||||    
T  25419150 attatacttttggtcttcgtgttttagcttactcacgaaattagttctgcccttttaaaacagaacaaaactgtcctttcaattatcattttt 25419242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 232 - 355
Target Start/End: Complemental strand, 25420683 - 25420560
Alignment:
Q  232 ttaattacacttttggtcctcgtgtattggcctactcacgaaactagtcctacccttttaaaacagaacaaaacggtccttcaattatcatttttgttgc 331  Q
    ||||||||||||||| || |||| | ||| ||||||||||||| |  ||   ||||||||||| |||| ||||  ||||||||||||| |||||||||||    
T  25420683 ttaattacacttttgatcatcgtattttgacctactcacgaaattgatcacgcccttttaaaatagaataaaattgtccttcaattattatttttgttgc 25420584  T
Q  332 atttttcgtcctacctcctatttt 355  Q
    |||||||||| |||| || |||||    
T  25420583 atttttcgtcataccccccatttt 25420560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 263 - 343
Target Start/End: Complemental strand, 18010256 - 18010176
Alignment:
Q  263 ctactcacgaaactagtcctacccttttaaaacagaacaaaacggtccttcaattatcatttttgttgcatttttcgtcct 343  Q
    |||||||||||| | || |  |||||||||||||||||||||  ||  |||||||||||||||||||||||||||||||||    
T  18010256 ctactcacgaaaatggttccgcccttttaaaacagaacaaaattgttattcaattatcatttttgttgcatttttcgtcct 18010176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 170 - 228
Target Start/End: Original strand, 32180515 - 32180573
Alignment:
Q  170 tggtcgaccactctaaaactaatttttaccttattacaaatcagtcctcatataaaata 228  Q
    |||| |||||||||||||||||  |||||||||||||||||||||||||||| ||||||    
T  32180515 tggtggaccactctaaaactaaactttaccttattacaaatcagtcctcatacaaaata 32180573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 175 - 228
Target Start/End: Original strand, 19606683 - 19606736
Alignment:
Q  175 gaccactctaaaactaatttttaccttattacaaatcagtcctcatataaaata 228  Q
    |||||||||||||||||  |||||||||||||||||||||||||||| ||||||    
T  19606683 gaccactctaaaactaaactttaccttattacaaatcagtcctcatacaaaata 19606736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 334 - 408
Target Start/End: Original strand, 50900637 - 50900710
Alignment:
Q  334 ttttcgtcctacctcctattttcaaactccagaaatgtagagaaatgacagttttaggcggntttagacctaccc 408  Q
    |||| ||||||||| |||||||||| ||| |||||  |||||||||||||||||||||| | |||||||||||||    
T  50900637 ttttagtcctaccttctattttcaa-ctctagaaacatagagaaatgacagttttaggcagttttagacctaccc 50900710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 175 - 228
Target Start/End: Complemental strand, 11019757 - 11019704
Alignment:
Q  175 gaccactctaaaactaatttttaccttattacaaatcagtcctcatataaaata 228  Q
    ||||||||||| ||||| ||||| |||||||||||||||||||| |||||||||    
T  11019757 gaccactctaagactaaattttatcttattacaaatcagtcctcgtataaaata 11019704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 175 - 228
Target Start/End: Complemental strand, 44881069 - 44881016
Alignment:
Q  175 gaccactctaaaactaatttttaccttattacaaatcagtcctcatataaaata 228  Q
    ||||| |||||||||||  ||||||||||||||||||| |||||||||||||||    
T  44881069 gaccaatctaaaactaaactttaccttattacaaatcaatcctcatataaaata 44881016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 334 - 390
Target Start/End: Original strand, 55192222 - 55192277
Alignment:
Q  334 ttttcgtcctacctcctattttcaaactccagaaatgtagagaaatgacagttttag 390  Q
    |||| |||||||||||||||||||| ||||||||| | |||||||||||||||||||    
T  55192222 ttttagtcctacctcctattttcaa-ctccagaaacgcagagaaatgacagttttag 55192277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 231 - 390
Target Start/End: Original strand, 22370598 - 22370757
Alignment:
Q  231 tttaattacacttttggtcctcgtgtattggcctactcacgaaactagtcctacccttttaaaacagaacaaaacggtccttcaattatcatttttgttg 330  Q
    |||||||||||||||||||||||  | ||| || |||||||||| | |||||||| |||| ||||  |||||||  |||| | || |||   |||| |||    
T  22370598 tttaattacacttttggtcctcgcattttgaccaactcacgaaaatggtcctaccttttttaaaccaaacaaaatcgtccctaaactatatgtttttttg 22370697  T
Q  331 catttttcgtcctacctcctattttcaaactccagaaatgtagagaaatgacagttttag 390  Q
    || |||| |||||| |||||  | || ||||||||||| | | |||||| ||||||||||    
T  22370698 cagttttagtcctatctccttatctccaactccagaaacgcacagaaataacagttttag 22370757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 223 - 390
Target Start/End: Original strand, 55389599 - 55389765
Alignment:
Q  223 aaaataggtttaattacacttttggtcctcgtgtattggcctactcacgaaactagtcctacccttttaaaacagaacaaaacggtccttcaattatcat 322  Q
    ||||||||  ||||||||||||||||||||   | | | || |||||||||| | |||||||| |||| |||  ||||||||  |||||| || ||| ||    
T  55389599 aaaataggcataattacacttttggtcctcccatttcgaccaactcacgaaaatggtcctaccttttttaaatcgaacaaaatcgtccttaaactat-at 55389697  T
Q  323 ttttgttgcatttttcgtcctacctcctattttcaaactccagaaatgtagagaaatgacagttttag 390  Q
     ||| ||||| |||| |||||| ||||   |||| ||||||||||| | | |||||||||||||||||    
T  55389698 gttttttgcagttttagtcctatctccctatttccaactccagaaacgcacagaaatgacagttttag 55389765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 323 - 408
Target Start/End: Original strand, 8873784 - 8873868
Alignment:
Q  323 ttttgttgcatttttcgtcctacctcctattttcaaactccagaaatgtagagaaatgacagttttaggcggntttagacctaccc 408  Q
    |||| ||||| |||| ||| |||||||||||||||| || |||||| | |||||||||||||||||||||   ||| |||||||||    
T  8873784 tttttttgcagttttagtcttacctcctattttcaa-cttcagaaacgcagagaaatgacagttttaggcaattttggacctaccc 8873868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 317 - 402
Target Start/End: Complemental strand, 37076133 - 37076048
Alignment:
Q  317 tatcatttttgttgcatttttcgtcctacctcctattttcaaactccagaaatgtagagaaatgacagttttaggcggntttagac 402  Q
    |||||| ||| || ||||||| ||| ||||| |||||||  ||||| ||||| ||||||||||| ||||||||||| | |||||||    
T  37076133 tatcatgttttttacatttttagtcttaccttctattttttaactctagaaacgtagagaaatggcagttttaggcagttttagac 37076048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 170 - 228
Target Start/End: Original strand, 45879251 - 45879309
Alignment:
Q  170 tggtcgaccactctaaaactaatttttaccttattacaaatcagtcctcatataaaata 228  Q
    |||| ||||||| |||| ||||  |||||||||||||||||||||||||||| ||||||    
T  45879251 tggtggaccactttaaagctaaactttaccttattacaaatcagtcctcatacaaaata 45879309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 317 - 405
Target Start/End: Original strand, 2323466 - 2323553
Alignment:
Q  317 tatcatttttgttgcatttttcgtcctacctcctattttcaaactccagaaatgtagagaaatgacagttttaggcggntttagaccta 405  Q
    |||||| ||| ||||| |||| |||||||||||||||||| |||||||||||    || |||||||||||||||||   ||||||||||    
T  2323466 tatcatgttttttgcaattttagtcctacctcctattttc-aactccagaaacacggataaatgacagttttaggcaattttagaccta 2323553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 175 - 228
Target Start/End: Complemental strand, 26000811 - 26000758
Alignment:
Q  175 gaccactctaaaactaatttttaccttattacaaatcagtcctcatataaaata 228  Q
    |||||||||||||||||  ||||| ||||||||||||||| |||||| ||||||    
T  26000811 gaccactctaaaactaaactttactttattacaaatcagtactcatacaaaata 26000758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 317 - 390
Target Start/End: Complemental strand, 27200150 - 27200078
Alignment:
Q  317 tatcatttttgttgcatttttcgtcctacctcctattttcaaactccagaaatgtagagaaatgacagttttag 390  Q
    |||||| ||| ||||| |||| ||| |||||||||||||| ||||||||||| | ||||||||||||| |||||    
T  27200150 tatcatgttttttgcagttttagtcatacctcctattttc-aactccagaaacgcagagaaatgacaggtttag 27200078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 230 - 343
Target Start/End: Original strand, 32695704 - 32695817
Alignment:
Q  230 gtttaattacacttttggtcctcgtgtattggcctactcacgaaactagtcctacccttttaaaacagaacaaaacggtccttcaattatcatttttgtt 329  Q
    ||||||||||| ||||||||||| | | |||||||||| |||||| |  |  |  | ||||||||||||||||||  ||||| | ||||| |||||||||    
T  32695704 gtttaattacatttttggtcctcatattttggcctacttacgaaattgattatgtctttttaaaacagaacaaaattgtcctacgattattatttttgtt 32695803  T
Q  330 gcatttttcgtcct 343  Q
    ||| |||| |||||    
T  32695804 gcaattttagtcct 32695817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 322 - 390
Target Start/End: Original strand, 37075781 - 37075848
Alignment:
Q  322 tttttgttgcatttttcgtcctacctcctattttcaaactccagaaatgtagagaaatgacagttttag 390  Q
    ||||| ||||| |||| |||||||||| ||||||||| ||||||||| | ||||||||||| |||||||    
T  37075781 ttttttttgcagttttagtcctacctcttattttcaa-ctccagaaacgcagagaaatgaccgttttag 37075848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 292 - 343
Target Start/End: Original strand, 23227319 - 23227370
Alignment:
Q  292 aaacagaacaaaacggtccttcaattatcatttttgttgcatttttcgtcct 343  Q
    ||||||||||||   ||||| ||||| |||||||||||||||||||||||||    
T  23227319 aaacagaacaaatttgtcctccaattttcatttttgttgcatttttcgtcct 23227370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #68
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 175 - 226
Target Start/End: Original strand, 48154456 - 48154507
Alignment:
Q  175 gaccactctaaaactaatttttaccttattacaaatcagtcctcatataaaa 226  Q
    ||||||| ||| ||||| |||||| |||||||||||||||||||||| ||||    
T  48154456 gaccactgtaacactaaattttactttattacaaatcagtcctcatacaaaa 48154507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #69
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 232 - 390
Target Start/End: Complemental strand, 52237360 - 52237203
Alignment:
Q  232 ttaattacacttttggtcctcgtgtattggcctactcacgaaactagtcctacc-cttttaaaacagaacaaaacggtccttcaattatcatttttgttg 330  Q
    |||||||||||||||||||||   | ||| || |||||||||| | |||||||| |||||||| | ||||||||  |||| | |||||| || ||| |||    
T  52237360 ttaattacacttttggtcctcacattttgaccaactcacgaaaatggtcctacctcttttaaatc-gaacaaaatcgtccctaaattat-atgttttttg 52237263  T
Q  331 catttttcgtcctacctcctattttcaaactccagaaatgtagagaaatgacagttttag 390  Q
    || |||| |||||| ||||   |||| |||||| |||| | | |||||||||||||||||    
T  52237262 cagttttagtcctatctccctatttctaactccggaaacgcacagaaatgacagttttag 52237203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #70
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 328 - 390
Target Start/End: Complemental strand, 37847267 - 37847206
Alignment:
Q  328 ttgcatttttcgtcctacctcctattttcaaactccagaaatgtagagaaatgacagttttag 390  Q
    ||||| |||| |||||| ||||||||||||| || |||||||| |||||||||||| ||||||    
T  37847267 ttgcagttttagtcctatctcctattttcaa-cttcagaaatgcagagaaatgacaattttag 37847206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #71
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 178 - 228
Target Start/End: Original strand, 40640403 - 40640453
Alignment:
Q  178 cactctaaaactaatttttaccttattacaaatcagtcctcatataaaata 228  Q
    ||||||||||||||  ||||  |||||||||||||||||||||| ||||||    
T  40640403 cactctaaaactaaactttattttattacaaatcagtcctcatacaaaata 40640453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #72
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 170 - 228
Target Start/End: Original strand, 40744203 - 40744261
Alignment:
Q  170 tggtcgaccactctaaaactaatttttaccttattacaaatcagtcctcatataaaata 228  Q
    |||| ||||||||||| |||||   |||||||||||||||||| |||||||| ||||||    
T  40744203 tggtagaccactctaagactaaacattaccttattacaaatcaatcctcatacaaaata 40744261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #73
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 328 - 390
Target Start/End: Original strand, 43222488 - 43222550
Alignment:
Q  328 ttgcatttttcgtcctacctcctattttcaaactccagaaatgtagagaaatgacagttttag 390  Q
    ||||||||||  ||||||| ||||||||  ||||||||||| ||| | |||||||||||||||    
T  43222488 ttgcatttttaatcctaccccctatttttcaactccagaaacgtacaaaaatgacagttttag 43222550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #74
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 218 - 251
Target Start/End: Original strand, 19794384 - 19794417
Alignment:
Q  218 catataaaataggtttaattacacttttggtcct 251  Q
    |||||||||||||||||||||| |||||||||||    
T  19794384 catataaaataggtttaattactcttttggtcct 19794417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #75
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 175 - 228
Target Start/End: Original strand, 47930436 - 47930489
Alignment:
Q  175 gaccactctaaaactaatttttaccttattacaaatcagtcctcatataaaata 228  Q
    |||||||||||||||||  ||||| |||||||||||||||| | ||| ||||||    
T  47930436 gaccactctaaaactaagctttactttattacaaatcagtcattatacaaaata 47930489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #76
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 232 - 390
Target Start/End: Original strand, 51827960 - 51828117
Alignment:
Q  232 ttaattacacttttggtcctcgtgtattggcctactcacgaaactagtccta-cccttttaaaacagaacaaaacggtccttcaattatcatttttgttg 330  Q
    |||||||||||||||||||| |  | ||| || |||||||||| | |||||| | |||||||| | ||||||||  |||| | || ||| || ||| |||    
T  51827960 ttaattacacttttggtccttgcattttgaccaactcacgaaattggtcctagctcttttaaatc-gaacaaaatcgtccctaaactat-atgttttttg 51828057  T
Q  331 catttttcgtcctacct-cctattttcaaactccagaaatgtagagaaatgacagttttag 390  Q
    ||||||| |||||| || ||||||||| ||||||||||| | | | |||||||||||||||    
T  51828058 catttttagtcctatctccctattttc-aactccagaaacgcacataaatgacagttttag 51828117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0951 (Bit Score: 144; Significance: 1e-75; HSPs: 2)
Name: scaffold0951
Description:

Target: scaffold0951; HSP #1
Raw Score: 144; E-Value: 1e-75
Query Start/End: Original strand, 227 - 413
Target Start/End: Complemental strand, 2214 - 2028
Alignment:
Q  227 taggtttaattacacttttggtcctcgtgtattggcctactcacgaaactagtcctacccttttaaaacagaacaaaacggtccttcaattatcattttt 326  Q
    |||| ||||||||||||||||||||||||| |||||||||| |||||||| ||||| |||||||||||||||||||||||||| ||||||||||||||||    
T  2214 taggcttaattacacttttggtcctcgtgttttggcctacttacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcattttt 2115  T
Q  327 gttgcatttttcgtcctacctcctattttcaaactccagaaatgtagagaaatgacagttttaggcggntttagacctacccttatg 413  Q
    |||||||||||||||||||||||||||||||||||||||||| | |||||||||| |||||||||||| ||||||||||||| ||||    
T  2114 gttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgaaagttttaggcggttttagacctacccctatg 2028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0951; HSP #2
Raw Score: 101; E-Value: 6e-50
Query Start/End: Original strand, 226 - 390
Target Start/End: Original strand, 1664 - 1827
Alignment:
Q  226 ataggtttaattacacttttggtcctcgtgtattggcctactcacgaaactagtcctacccttttaaaacagaacaaaacggtccttcaattatcatttt 325  Q
    ||||| ||||||||||||||||||||| ||| ||||||||||||||||||| ||||| ||||||||||||||||||||| | ||||||||||||||||||    
T  1664 ataggcttaattacacttttggtcctcctgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaatgttccttcaattatcatttt 1763  T
Q  326 tgttgcatttttcgtcctacctcctattttcaaactccagaaatgtagagaaatgacagttttag 390  Q
    ||||||||||||||||||||| || ||||| |  ||||| ||| | |||||||||||||||||||    
T  1764 tgttgcatttttcgtcctaccccccatttt-attctccaaaaacgcagagaaatgacagttttag 1827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 144; Significance: 1e-75; HSPs: 57)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 144; E-Value: 1e-75
Query Start/End: Original strand, 227 - 413
Target Start/End: Complemental strand, 22374872 - 22374686
Alignment:
Q  227 taggtttaattacacttttggtcctcgtgtattggcctactcacgaaactagtcctacccttttaaaacagaacaaaacggtccttcaattatcattttt 326  Q
    |||| ||||||||||||||||||||||||| ||||||||||||||||| | ||| | |||||||||||||||||||||||||||||||||||||||||||    
T  22374872 taggcttaattacacttttggtcctcgtgttttggcctactcacgaaattggtcttgcccttttaaaacagaacaaaacggtccttcaattatcattttt 22374773  T
Q  327 gttgcatttttcgtcctacctcctattttcaaactccagaaatgtagagaaatgacagttttaggcggntttagacctacccttatg 413  Q
    |||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||| ||||||||| ||| ||||    
T  22374772 gttgcatttttcgtcctacctcctattttcaaactctagaaatgcagagaaatgacagttttaggcggttttagaccttcccctatg 22374686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 143; E-Value: 5e-75
Query Start/End: Original strand, 232 - 413
Target Start/End: Original strand, 18450833 - 18451014
Alignment:
Q  232 ttaattacacttttggtcctcgtgtattggcctactcacgaaactagtcctacccttttaaaacagaacaaaacggtccttcaattatcatttttgttgc 331  Q
    ||||||||||||||||||||||||| ||||||||||||||||||| ||||  ||||||||||||||||||||||||||||||||||||||||||| ||||    
T  18450833 ttaattacacttttggtcctcgtgttttggcctactcacgaaactggtccagcccttttaaaacagaacaaaacggtccttcaattatcattttttttgc 18450932  T
Q  332 atttttcgtcctacctcctattttcaaactccagaaatgtagagaaatgacagttttaggcggntttagacctacccttatg 413  Q
    |||||| |||||||||||||||||||||||||||||| | ||||||||||||||||||||||| ||||||||||||| ||||    
T  18450933 atttttagtcctacctcctattttcaaactccagaaacgcagagaaatgacagttttaggcggttttagacctacccctatg 18451014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 139; E-Value: 1e-72
Query Start/End: Original strand, 228 - 413
Target Start/End: Complemental strand, 40027686 - 40027501
Alignment:
Q  228 aggtttaattacacttttggtcctcgtgtattggcctactcacgaaactagtcctacccttttaaaacagaacaaaacggtccttcaattatcatttttg 327  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||| | ||||| |||||||||||||||||||||||||| |||||||||||||||||    
T  40027686 aggtttaattacacttttggtcctcgtgttttggcctactcacgaaattggtcctgcccttttaaaacagaacaaaacggtctttcaattatcatttttg 40027587  T
Q  328 ttgcatttttcgtcctacctcctattttcaaactccagaaatgtagagaaatgacagttttaggcggntttagacctacccttatg 413  Q
    ||||||||||||||||||||||||||||||||||||| ||| | || |||||| ||||||||||||| ||||||||||||| ||||    
T  40027586 ttgcatttttcgtcctacctcctattttcaaactccataaacgcagtgaaatggcagttttaggcggttttagacctacccatatg 40027501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 139; E-Value: 1e-72
Query Start/End: Original strand, 232 - 413
Target Start/End: Original strand, 40815348 - 40815529
Alignment:
Q  232 ttaattacacttttggtcctcgtgtattggcctactcacgaaactagtcctacccttttaaaacagaacaaaacggtccttcaattatcatttttgttgc 331  Q
    ||||||||||||||||||||||||| ||||||||||||||||||| ||| | ||||||||||||| ||||||||||| ||||||||||||||||||||||    
T  40815348 ttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcttgcccttttaaaacataacaaaacggttcttcaattatcatttttgttgc 40815447  T
Q  332 atttttcgtcctacctcctattttcaaactccagaaatgtagagaaatgacagttttaggcggntttagacctacccttatg 413  Q
    |||||||||||||||||||||||| |||||||||||| | ||||||||||||||||||||||| ||||||||||||| ||||    
T  40815448 atttttcgtcctacctcctatttttaaactccagaaacgcagagaaatgacagttttaggcggttttagacctacccctatg 40815529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 137; E-Value: 2e-71
Query Start/End: Original strand, 218 - 413
Target Start/End: Complemental strand, 11091076 - 11090881
Alignment:
Q  218 catataaaataggtttaattacacttttggtcctcgtgtattggcctactcacgaaactagtcctacccttttaaaacagaacaaaacggtccttcaatt 317  Q
    ||||| ||||||| ||||||||||||||||||||||||| ||||||||||||||||||| ||| | ||||||||||||||||||||||||||||||||||    
T  11091076 catattaaataggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcatgcccttttaaaacagaacaaaacggtccttcaatt 11090977  T
Q  318 atcatttttgttgcatttttcgtcctacctcctattttcaaactccagaaatgtagagaaatgacagttttaggcggntttagacctacccttatg 413  Q
    |||||| |||||| ||||||||||||| ||||||||||||||||||||||| | ||| |||||||| |||||||||| ||||||||||||| ||||    
T  11090976 atcattattgttgtatttttcgtcctatctcctattttcaaactccagaaacgcagataaatgacaattttaggcggttttagacctacccatatg 11090881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 133; E-Value: 5e-69
Query Start/End: Original strand, 227 - 406
Target Start/End: Complemental strand, 7446893 - 7446714
Alignment:
Q  227 taggtttaattacacttttggtcctcgtgtattggcctactcacgaaactagtcctacccttttaaaacagaacaaaacggtccttcaattatcattttt 326  Q
    |||| ||||||||| ||||| ||||||||| ||| | ||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||    
T  7446893 taggcttaattacatttttgatcctcgtgttttgccttactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttt 7446794  T
Q  327 gttgcatttttcgtcctacctcctattttcaaactccagaaatgtagagaaatgacagttttaggcggntttagacctac 406  Q
    |||||||||||||||||||||||||||||||||||||| ||| | ||||||||||||||||||||||| |||||||||||    
T  7446793 gttgcatttttcgtcctacctcctattttcaaactccaaaaacgcagagaaatgacagttttaggcggttttagacctac 7446714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 132; E-Value: 2e-68
Query Start/End: Original strand, 231 - 409
Target Start/End: Original strand, 8425357 - 8425534
Alignment:
Q  231 tttaattacacttttggtcctcgtgtattggcctactcacgaaactagtcctacccttttaaaacagaacaaaacggtccttcaattatcatttttgttg 330  Q
    ||||||||||||||||||||| |||| ||||||||||||||||| | ||| |||| ||||||||||||||||||||||| |||||||||||||| |||||    
T  8425357 tttaattacacttttggtccttgtgttttggcctactcacgaaattggtcttacctttttaaaacagaacaaaacggtc-ttcaattatcatttgtgttg 8425455  T
Q  331 catttttcgtcctacctcctattttcaaactccagaaatgtagagaaatgacagttttaggcggntttagacctaccct 409  Q
    |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| |||| ||||||||||||||    
T  8425456 catttttcgtcctacctcctattttcaaactccagaaatgcagagaaatgacagttttaagcggttttagacctaccct 8425534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 132; E-Value: 2e-68
Query Start/End: Original strand, 227 - 413
Target Start/End: Complemental strand, 43058879 - 43058694
Alignment:
Q  227 taggtttaattacacttttggtcctcgtgtattggcctactcacgaaactagtcctacccttttaaaacagaacaaaacggtccttcaattatcattttt 326  Q
    |||| ||||||||||||||| ||||||||| ||||||||||||||||||| ||||| | ||||||||||||||||||| ||||||||||||||||||||     
T  43058879 taggcttaattacacttttgatcctcgtgttttggcctactcacgaaactggtcctgctcttttaaaacagaacaaaatggtccttcaattatcatttt- 43058781  T
Q  327 gttgcatttttcgtcctacctcctattttcaaactccagaaatgtagagaaatgacagttttaggcggntttagacctacccttatg 413  Q
    |||||||||||||||||||||||||||||||||||||||||| | ||||||||| ||||||||||||| ||||||||||||| ||||    
T  43058780 gttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatggcagttttaggcggttttagacctacccctatg 43058694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 127; E-Value: 2e-65
Query Start/End: Original strand, 236 - 405
Target Start/End: Complemental strand, 239890 - 239721
Alignment:
Q  236 ttacacttttggtcctcgtgtattggcctactcacgaaactagtcctacccttttaaaacagaacaaaacggtccttcaattatcatttttgttgcattt 335  Q
    ||||||||||||||||||||| ||||||||||||||||| | ||||| ||||||||||||||||||||| |||||||||||||||||||||||||| |||    
T  239890 ttacacttttggtcctcgtgttttggcctactcacgaaattggtcctgcccttttaaaacagaacaaaatggtccttcaattatcatttttgttgcgttt 239791  T
Q  336 ttcgtcctacctcctattttcaaactccagaaatgtagagaaatgacagttttaggcggntttagaccta 405  Q
    |||||| |||||||||||||||||||||||||| | ||||||||| ||||||||||||| ||||||||||    
T  239790 ttcgtcatacctcctattttcaaactccagaaacgcagagaaatggcagttttaggcggttttagaccta 239721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 127; E-Value: 2e-65
Query Start/End: Original strand, 232 - 413
Target Start/End: Complemental strand, 28617156 - 28616975
Alignment:
Q  232 ttaattacacttttggtcctcgtgtattggcctactcacgaaactagtcctacccttttaaaacagaacaaaacggtccttcaattatcatttttgttgc 331  Q
    ||||||||||||||||||||||||| ||||||||||||||||||| || ||  |||||||||||||||||||| ||||||||||||||||||||||||||    
T  28617156 ttaattacacttttggtcctcgtgttttggcctactcacgaaactggttctgtccttttaaaacagaacaaaatggtccttcaattatcatttttgttgc 28617057  T
Q  332 atttttcgtcctacctcctattttcaaactccagaaatgtagagaaatgacagttttaggcggntttagacctacccttatg 413  Q
    |||||||||| |||||||||||||||||||||||||| | ||||||||  ||||||||||||  ||||||||||||| ||||    
T  28617056 atttttcgtcttacctcctattttcaaactccagaaacgcagagaaatagcagttttaggcgattttagacctacccctatg 28616975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 124; E-Value: 1e-63
Query Start/End: Original strand, 227 - 390
Target Start/End: Complemental strand, 26538626 - 26538463
Alignment:
Q  227 taggtttaattacacttttggtcctcgtgtattggcctactcacgaaactagtcctacccttttaaaacagaacaaaacggtccttcaattatcattttt 326  Q
    |||| ||||||||||||||||||||||||| ||||||||||||||||||| ||||| |||| ||||||||||||||||||||||||||||||||||||||    
T  26538626 taggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgccctcttaaaacagaacaaaacggtccttcaattatcattttt 26538527  T
Q  327 gttgcatttttcgtcctacctcctattttcaaactccagaaatgtagagaaatgacagttttag 390  Q
    |||||||||||||||||||| || |||||||||| ||||||| | |||||||||||||||||||    
T  26538526 gttgcatttttcgtcctaccccccattttcaaaccccagaaacgcagagaaatgacagttttag 26538463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 123; E-Value: 5e-63
Query Start/End: Original strand, 232 - 413
Target Start/End: Complemental strand, 3026003 - 3025824
Alignment:
Q  232 ttaattacacttttggtcctcgtgtattggcctactcacgaaactagtcctacccttttaaaacagaacaaaacggtccttcaattatcatttttgttgc 331  Q
    ||||||||| ||||||||||||||| ||||| ||||||||||| | || || ||||||||||||| |||||||||||||||||||||| |||||||||||    
T  3026003 ttaattaca-ttttggtcctcgtgttttggcttactcacgaaattggttctgcccttttaaaaca-aacaaaacggtccttcaattattatttttgttgc 3025906  T
Q  332 atttttcgtcctacctcctattttcaaactccagaaatgtagagaaatgacagttttaggcggntttagacctacccttatg 413  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| |||| ||||||||||||| ||||    
T  3025905 atttttcgtcctacctcctattttcaaactccagaaatgcagagaaatgacagttttaagcgggtttagacctacccatatg 3025824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 119; E-Value: 1e-60
Query Start/End: Original strand, 226 - 407
Target Start/End: Complemental strand, 1978657 - 1978476
Alignment:
Q  226 ataggtttaattacacttttggtcctcgtgtattggcctactcacgaaactagtcctacccttttaaaacagaacaaaacggtccttcaattatcatttt 325  Q
    ||||| |||||||||||||||||||| |||| ||||||||||||||||| | ||||| |||||||||||||||||||||| |||||||||||||||||||    
T  1978657 ataggcttaattacacttttggtccttgtgttttggcctactcacgaaattggtcctgcccttttaaaacagaacaaaacagtccttcaattatcatttt 1978558  T
Q  326 tgttgcatttttcgtcctacctcctattttcaaactccagaaatgtagagaaatgacagttttaggcggntttagacctacc 407  Q
    |||||||||||| |||||||||||||||||||||||| |||||   | ||||||| |||||||| |||| ||||||||||||    
T  1978557 tgttgcattttttgtcctacctcctattttcaaactctagaaacacaaagaaatggcagttttatgcggttttagacctacc 1978476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 118; E-Value: 5e-60
Query Start/End: Original strand, 225 - 390
Target Start/End: Original strand, 11090517 - 11090681
Alignment:
Q  225 aataggtttaattacacttttggtcctcgtgtattggcctactcacgaaactagtcctacccttttaaaacagaacaaaacggtccttcaattatcattt 324  Q
    |||||||||||||||||||||||||||||||| ||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||    
T  11090517 aataggtttaattacacttttggtcctcgtgttttggcctactcacgaaacttgtcctgcccttttaaaacagaacaaaacggtccttcaattatcattt 11090616  T
Q  325 ttgttgcatttttcgtcctacctcctattttcaaactccagaaatgtagagaaatgacagttttag 390  Q
    |||||||||||||||||||||| || ||||| |  ||||| ||| | |||||||||||||||||||    
T  11090617 ttgttgcatttttcgtcctaccccccatttt-attctccaaaaacgcagagaaatgacagttttag 11090681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 115; E-Value: 3e-58
Query Start/End: Original strand, 232 - 413
Target Start/End: Complemental strand, 14432683 - 14432502
Alignment:
Q  232 ttaattacacttttggtcctcgtgtattggcctactcacgaaactagtcctacccttttaaaacagaacaaaacggtccttcaattatcatttttgttgc 331  Q
    ||||||||| ||||||||||||||| |||||||||||| |||||| ||| | || ||||||||||||| |||| ||| |||||||||| |||||||||||    
T  14432683 ttaattacatttttggtcctcgtgttttggcctactcatgaaactggtcatgccattttaaaacagaataaaatggttcttcaattattatttttgttgc 14432584  T
Q  332 atttttcgtcctacctcctattttcaaactccagaaatgtagagaaatgacagttttaggcggntttagacctacccttatg 413  Q
    ||||||| ||||||||||||||||||||||| ||||| | ||||||||||||||||||||||  ||||||||||||||||||    
T  14432583 atttttcatcctacctcctattttcaaactctagaaacgcagagaaatgacagttttaggcgaatttagacctacccttatg 14432502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 227 - 390
Target Start/End: Complemental strand, 40815892 - 40815730
Alignment:
Q  227 taggtttaattacacttttggtcctcgtgtattggcctactcacgaaactagtcctacccttttaaaacagaacaaaacggtccttcaattatcattttt 326  Q
    |||||||||||||||||||||||||||||| ||||||||||||||||||| ||  | |||||||||||||||||||||||| ||||||||||||||||||    
T  40815892 taggtttaattacacttttggtcctcgtgttttggcctactcacgaaactggtaatgcccttttaaaacagaacaaaacggcccttcaattatcattttt 40815793  T
Q  327 gttgcatttttcgtcctacctcctattttcaaactccagaaatgtagagaaatgacagttttag 390  Q
    |||||||||||||||||||| || ||||| |  ||||| ||| | |||||||||||||||||||    
T  40815792 gttgcatttttcgtcctaccccccatttt-attctccaaaaacgcagagaaatgacagttttag 40815730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 103; E-Value: 4e-51
Query Start/End: Original strand, 225 - 355
Target Start/End: Original strand, 22374316 - 22374446
Alignment:
Q  225 aataggtttaattacacttttggtcctcgtgtattggcctactcacgaaactagtcctacccttttaaaacagaacaaaacggtccttcaattatcattt 324  Q
    |||||| ||||||||||||||||||||||||| ||||||||||||||||||| ||| | |||||||||||||||||||||||||||||||||||||||||    
T  22374316 aataggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcatgcccttttaaaacagaacaaaacggtccttcaattatcattt 22374415  T
Q  325 ttgttgcatttttcgtcctacctcctatttt 355  Q
    |||||||||||||||||||||| || |||||    
T  22374416 ttgttgcatttttcgtcctaccccccatttt 22374446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 100; E-Value: 3e-49
Query Start/End: Original strand, 227 - 390
Target Start/End: Original strand, 239351 - 239512
Alignment:
Q  227 taggtttaattacacttttggtcctcgtgtattggcctactcacgaaactagtcctacccttttaaaacagaacaaaacggtccttcaattatcattttt 326  Q
    |||| |||||||||||||||||| |||||| ||||||||||||||||||| ||||| || ||||||||||||||||||||||||||||||||||||||||    
T  239351 taggcttaattacacttttggtcatcgtgttttggcctactcacgaaactggtcctgcc-ttttaaaacagaacaaaacggtccttcaattatcattttt 239449  T
Q  327 gttgcatttttcgtcctacctcctattttcaaactccagaaatgtagagaaatgacagttttag 390  Q
    |||||||||||||||||||| || ||||| |  ||||| ||| | |||||||||||||||||||    
T  239450 gttgcatttttcgtcctaccccccatttt-attctccaaaaacgcagagaaatgacagttttag 239512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 96; E-Value: 6e-47
Query Start/End: Original strand, 219 - 390
Target Start/End: Original strand, 1978098 - 1978268
Alignment:
Q  219 atataaaataggtttaattacacttttggtcctcgtgtattggcctactcacgaaactagtcctacccttttaaaacagaacaaaacggtccttcaatta 318  Q
    ||||||| |||| ||||||||| |||||||||| |||| ||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||||    
T  1978098 atataaactaggcttaattacatttttggtccttgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaatta 1978197  T
Q  319 tcatttttgttgcatttttcgtcctacctcctattttcaaactccagaaatgtagagaaatgacagttttag 390  Q
    ||||||||||||||||||| |||||  | || ||||| |  ||||| ||| | |||||||||||||||||||    
T  1978198 tcatttttgttgcattttttgtcctgtcccccatttt-attctccaaaaacgcagagaaatgacagttttag 1978268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 96; E-Value: 6e-47
Query Start/End: Original strand, 232 - 355
Target Start/End: Original strand, 28616616 - 28616739
Alignment:
Q  232 ttaattacacttttggtcctcgtgtattggcctactcacgaaactagtcctacccttttaaaacagaacaaaacggtccttcaattatcatttttgttgc 331  Q
    ||||||||||||||||||||||||| ||||||||||||||||||| ||| | ||||||||||||||||||||||||||||||||||||||||||||||||    
T  28616616 ttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcttgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgc 28616715  T
Q  332 atttttcgtcctacctcctatttt 355  Q
    | ||||||||||||| || |||||    
T  28616716 aattttcgtcctaccccccatttt 28616739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 232 - 390
Target Start/End: Original strand, 40027143 - 40027300
Alignment:
Q  232 ttaattacacttttggtcctcgtgtattggcctactcacgaaactagtcctacccttttaaaacagaacaaaacggtccttcaattatcatttttgttgc 331  Q
    |||||||||||||||||| |||||| ||||||||||||||||||| ||| | ||||||||||||||||||||||||||||||||||||||||||||||||    
T  40027143 ttaattacacttttggtcatcgtgttttggcctactcacgaaactggtcatgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgc 40027242  T
Q  332 atttttcgtcctacctcctattttcaaactccagaaatgtagagaaatgacagttttag 390  Q
    |||||| ||||||||  | ||||| |  ||||| ||| | |||||||||||||||||||    
T  40027243 attttttgtcctaccctccatttt-attctccaaaaacgcagagaaatgacagttttag 40027300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 232 - 390
Target Start/End: Original strand, 43058336 - 43058493
Alignment:
Q  232 ttaattacacttttggtcctcgtgtattggcctactcacgaaactagtcctacccttttaaaacagaacaaaacggtccttcaattatcatttttgttgc 331  Q
    ||||||||||||||| ||||||||| |||||| |||||| ||||| ||||| || |||||||||||||||||||||||||||||||||||||||||||||    
T  43058336 ttaattacacttttgatcctcgtgttttggccaactcactaaactggtcctgcctttttaaaacagaacaaaacggtccttcaattatcatttttgttgc 43058435  T
Q  332 atttttcgtcctacctcctattttcaaactccagaaatgtagagaaatgacagttttag 390  Q
    ||||||||| ||||| || ||||| |  ||||| ||| |||||||||||||||||||||    
T  43058436 atttttcgttctaccccccatttt-attctccaaaaacgtagagaaatgacagttttag 43058493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 227 - 346
Target Start/End: Original strand, 3025464 - 3025583
Alignment:
Q  227 taggtttaattacacttttggtcctcgtgtattggcctactcacgaaactagtcctacccttttaaaacagaacaaaacggtccttcaattatcattttt 326  Q
    ||||||| |||||| ||||||||||||||| ||||||||||||||||||| ||||| | |||||||||||||||||||||||||||||| ||||||||||    
T  3025464 taggtttgattacatttttggtcctcgtgttttggcctactcacgaaactggtcctgctcttttaaaacagaacaaaacggtccttcaagtatcattttt 3025563  T
Q  327 gttgcatttttcgtcctacc 346  Q
    ||||||||||||||||||||    
T  3025564 gttgcatttttcgtcctacc 3025583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 227 - 390
Target Start/End: Complemental strand, 18451378 - 18451216
Alignment:
Q  227 taggtttaattacacttttggtcctcgtgtattggcctactcacgaaactagtcctacccttttaaaacagaacaaaacggtccttcaattatcattttt 326  Q
    |||| ||||||||||||||||||||||||| |||||||||| |||||||| ||||| |||||||||||||||||||||  ||||||||| ||||||||||    
T  18451378 taggcttaattacacttttggtcctcgtgttttggcctacttacgaaactggtcctgcccttttaaaacagaacaaaatagtccttcaaatatcattttt 18451279  T
Q  327 gttgcatttttcgtcctacctcctattttcaaactccagaaatgtagagaaatgacagttttag 390  Q
    |||||||||||| ||||||| || ||||| |  ||||| ||| | |||||||||||||||||||    
T  18451278 gttgcatttttcttcctaccccccatttt-attctccaaaaacgcagagaaatgacagttttag 18451216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 232 - 355
Target Start/End: Original strand, 20444752 - 20444875
Alignment:
Q  232 ttaattacacttttggtcctcgtgtattggcctactcacgaaactagtcctacccttttaaaacagaacaaaacggtccttcaattatcatttttgttgc 331  Q
    ||||||||||||||||||||||||| |||||| |||||||||||| ||||| ||||||||||||||||||||||||||||||| ||||||||||||||||    
T  20444752 ttaattacacttttggtcctcgtgttttggccaactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcagttatcatttttgttgc 20444851  T
Q  332 atttttcgtcctacctcctatttt 355  Q
    | ||||||||||||| || |||||    
T  20444852 agttttcgtcctaccccccatttt 20444875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 232 - 355
Target Start/End: Original strand, 26538100 - 26538223
Alignment:
Q  232 ttaattacacttttggtcctcgtgtattggcctactcacgaaactagtcctacccttttaaaacagaacaaaacggtccttcaattatcatttttgttgc 331  Q
    ||||||||||||||||||||||||| ||||| ||||||||||||| || || |||||||||||||||||||| |||||||||||||||||||||||||||    
T  26538100 ttaattacacttttggtcctcgtgttttggcttactcacgaaactggttctgcccttttaaaacagaacaaagcggtccttcaattatcatttttgttgc 26538199  T
Q  332 atttttcgtcctacctcctatttt 355  Q
    ||||||||||||||| || |||||    
T  26538200 atttttcgtcctaccccccatttt 26538223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 220 - 347
Target Start/End: Complemental strand, 28847249 - 28847122
Alignment:
Q  220 tataaaataggtttaattacacttttggtcctcgtgtattggcctactcacgaaactagtcctacccttttaaaacagaacaaaacggtccttcaattat 319  Q
    ||||| ||||| ||||||||| ||||||||||||||| |||| |||||||||||||| ||||| | ||||||||||| ||||||||||||||||||||||    
T  28847249 tataatataggcttaattacatttttggtcctcgtgttttggtctactcacgaaactggtcctgctcttttaaaacaaaacaaaacggtccttcaattat 28847150  T
Q  320 catttttgttgcatttttcgtcctacct 347  Q
    ||||||||||||||||||||||||||||    
T  28847149 catttttgttgcatttttcgtcctacct 28847122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 229 - 390
Target Start/End: Original strand, 14432142 - 14432302
Alignment:
Q  229 ggtttaattacacttttggtcctcgtgtattggcctactcacgaaactagtcctacccttttaaaacagaacaaaacggtccttcaattatcatttttgt 328  Q
    |||||||||||||||||||||||||||| |||||||||||| |||||| ||| | ||||||||||| | |||||||||||||||||| ||||||||||||    
T  14432142 ggtttaattacacttttggtcctcgtgttttggcctactcatgaaactggtcttgcccttttaaaatataacaaaacggtccttcaactatcatttttgt 14432241  T
Q  329 tgcatttttcgtcctacctcctattttcaaactccagaaatgtagagaaatgacagttttag 390  Q
    ||||||||| |||||||| || ||||| |  ||||| ||| | |||||||||||||||||||    
T  14432242 tgcatttttggtcctaccccccatttt-attctccaaaaacgcagagaaatgacagttttag 14432302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 86; E-Value: 6e-41
Query Start/End: Original strand, 227 - 344
Target Start/End: Complemental strand, 20440578 - 20440461
Alignment:
Q  227 taggtttaattacacttttggtcctcgtgtattggcctactcacgaaactagtcctacccttttaaaacagaacaaaacggtccttcaattatcattttt 326  Q
    |||| ||||||||||||||||||||||||| |||||| |||||||||||| ||||| |||||||||||||||||||||||||| |||| |||||||||||    
T  20440578 taggcttaattacacttttggtcctcgtgttttggccaactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcagttatcattttt 20440479  T
Q  327 gttgcatttttcgtccta 344  Q
    |||||| |||||||||||    
T  20440478 gttgcagttttcgtccta 20440461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 84; E-Value: 9e-40
Query Start/End: Original strand, 231 - 390
Target Start/End: Complemental strand, 8425903 - 8425745
Alignment:
Q  231 tttaattacacttttggtcctcgtgtattggcctactcacgaaactagtcctacccttttaaaacagaacaaaacggtccttcaattatcatttttgttg 330  Q
    |||||||||||||||||| || |||| |||| |||||||||||| | ||||| ||||||||||| |||||||||| ||||||||||||||||||||||||    
T  8425903 tttaattacacttttggttcttgtgttttggtctactcacgaaattggtcctgcccttttaaaatagaacaaaactgtccttcaattatcatttttgttg 8425804  T
Q  331 catttttcgtcctacctcctattttcaaactccagaaatgtagagaaatgacagttttag 390  Q
    ||||||||||| |||| || ||||| |  ||||| ||| | |||||||||||||||||||    
T  8425803 catttttcgtcttacccccaatttt-attctccaaaaacgcagagaaatgacagttttag 8425745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 232 - 344
Target Start/End: Complemental strand, 35781205 - 35781093
Alignment:
Q  232 ttaattacacttttggtcctcgtgtattggcctactcacgaaactagtcctacccttttaaaacagaacaaaacggtccttcaattatcatttttgttgc 331  Q
    ||||||||||||||| ||||||||| ||||||||||||||||| | ||| | ||||||||||||||||||||||  ||||||||||||||||||||||||    
T  35781205 ttaattacacttttgatcctcgtgttttggcctactcacgaaaatggtcatgcccttttaaaacagaacaaaactatccttcaattatcatttttgttgc 35781106  T
Q  332 atttttcgtccta 344  Q
    |||||||||||||    
T  35781105 atttttcgtccta 35781093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 232 - 355
Target Start/End: Original strand, 35779711 - 35779834
Alignment:
Q  232 ttaattacacttttggtcctcgtgtattggcctactcacgaaactagtcctacccttttaaaacagaacaaaacggtccttcaattatcatttttgttgc 331  Q
    ||||||||||||||||||||||||| ||| | ||||||||||| | ||||| || ||||||||||||||||||  |||||||||||||||||||||||||    
T  35779711 ttaattacacttttggtcctcgtgttttgacatactcacgaaaatggtcctgccattttaaaacagaacaaaattgtccttcaattatcatttttgttgc 35779810  T
Q  332 atttttcgtcctacctcctatttt 355  Q
    |||||| |||||||| || |||||    
T  35779811 attttttgtcctaccccccatttt 35779834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 232 - 346
Target Start/End: Original strand, 7446345 - 7446459
Alignment:
Q  232 ttaattacacttttggtcctcgtgtattggcctactcacgaaactagtcctacccttttaaaacagaacaaaacggtccttcaattatcatttttgttgc 331  Q
    ||||||||||||||| ||||||||| |||| ||||||| |||| | ||||| |||||||||||||||||||||||||| |||||||||||||||| ||||    
T  7446345 ttaattacacttttgatcctcgtgttttggtctactcatgaaattggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttttattgc 7446444  T
Q  332 atttttcgtcctacc 346  Q
    |||||||||| ||||    
T  7446445 atttttcgtcatacc 7446459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 232 - 355
Target Start/End: Original strand, 8972240 - 8972363
Alignment:
Q  232 ttaattacacttttggtcctcgtgtattggcctactcacgaaactagtcctacccttttaaaacagaacaaaacggtccttcaattatcatttttgttgc 331  Q
    ||||||||||||||||||||||||| ||||| | ||||||||| | ||| | |||||| ||||||||||||||  ||| |||||||||||||||||||||    
T  8972240 ttaattacacttttggtcctcgtgttttggcatgctcacgaaaatggtcatgccctttcaaaacagaacaaaattgtcattcaattatcatttttgttgc 8972339  T
Q  332 atttttcgtcctacctcctatttt 355  Q
    ||||||||| ||||| ||||||||    
T  8972340 atttttcgttctaccccctatttt 8972363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 232 - 342
Target Start/End: Original strand, 15551502 - 15551612
Alignment:
Q  232 ttaattacacttttggtcctcgtgtattggcctactcacgaaactagtcctacccttttaaaacagaacaaaacggtccttcaattatcatttttgttgc 331  Q
    ||||||||||||||||||||||||| ||||  ||||||||||| | ||| | || |||||||||| |||||||  |||||||| ||||||||||||||||    
T  15551502 ttaattacacttttggtcctcgtgttttggtttactcacgaaaatggtcatgcctttttaaaacaaaacaaaaatgtccttcagttatcatttttgttgc 15551601  T
Q  332 atttttcgtcc 342  Q
    |||||||||||    
T  15551602 atttttcgtcc 15551612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 232 - 346
Target Start/End: Complemental strand, 15552595 - 15552482
Alignment:
Q  232 ttaattacacttttggtcctcgtgtattggcctactcacgaaactagtcctacccttttaaaacagaacaaaacggtccttcaattatcatttttgttgc 331  Q
    |||||||||||||||||| |  ||| ||||||||||||||||| |  |||  |||||||||||||||||||||  ||| ||||||||||||||||||||     
T  15552595 ttaattacacttttggtcataatgttttggcctactcacgaaaatgatccg-cccttttaaaacagaacaaaattgtcattcaattatcatttttgttgt 15552497  T
Q  332 atttttcgtcctacc 346  Q
    |||||||||||||||    
T  15552496 atttttcgtcctacc 15552482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 167 - 228
Target Start/End: Complemental strand, 41713448 - 41713387
Alignment:
Q  167 tgttggtcgaccactctaaaactaatttttaccttattacaaatcagtcctcatataaaata 228  Q
    ||||||| ||||||||||||||||| ||||| ||||||||||||||||||||| | ||||||    
T  41713448 tgttggtggaccactctaaaactaagttttatcttattacaaatcagtcctcacacaaaata 41713387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 176 - 228
Target Start/End: Original strand, 18947380 - 18947432
Alignment:
Q  176 accactctaaaactaatttttaccttattacaaatcagtcctcatataaaata 228  Q
    ||||||||||||||||  |||||||||||||||||||||||||||| ||||||    
T  18947380 accactctaaaactaaactttaccttattacaaatcagtcctcatacaaaata 18947432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 176 - 228
Target Start/End: Complemental strand, 19073630 - 19073578
Alignment:
Q  176 accactctaaaactaatttttaccttattacaaatcagtcctcatataaaata 228  Q
    |||||| ||||||||| |||||||||||||||||||||||||| |||||||||    
T  19073630 accactttaaaactaaattttaccttattacaaatcagtcctcgtataaaata 19073578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 227 - 390
Target Start/End: Complemental strand, 28143577 - 28143416
Alignment:
Q  227 taggtttaattacacttttggtcctcgtgtattggcctactcacgaaactagtcctacccttttaaaacagaacaaaacggtccttcaattatcattttt 326  Q
    |||| |||||| |||||||||||||||  | ||| ||  ||||||||| | ||||| ||  ||| |||  ||||||||  |||| | || |||||| |||    
T  28143577 taggcttaatttcacttttggtcctcgcattttgaccagctcacgaaaatggtcctgcctctttcaaatcgaacaaaatcgtccctaaactatcatgttt 28143478  T
Q  327 gttgcatttttcgtcctacctcctattttcaaactccagaaatgtagagaaatgacagttttag 390  Q
     ||||| |||| ||||||| |||||||||||| ||||||||| | |||||||||||||||||||    
T  28143477 -ttgcagttttagtcctacgtcctattttcaa-ctccagaaacgcagagaaatgacagttttag 28143416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 170 - 221
Target Start/End: Original strand, 38249902 - 38249953
Alignment:
Q  170 tggtcgaccactctaaaactaatttttaccttattacaaatcagtcctcata 221  Q
    |||| ||||||||||||||||| ||||||||| |||||||||||||||||||    
T  38249902 tggtggaccactctaaaactaaattttaccttgttacaaatcagtcctcata 38249953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 166 - 228
Target Start/End: Complemental strand, 19093742 - 19093680
Alignment:
Q  166 ttgttggtcgaccactctaaaactaatttttaccttattacaaatcagtcctcatataaaata 228  Q
    |||||||  |||||||||||||||||  ||||||||||||||||||||||||| || ||||||    
T  19093742 ttgttggaggaccactctaaaactaaactttaccttattacaaatcagtcctcttacaaaata 19093680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 175 - 228
Target Start/End: Original strand, 17244839 - 17244892
Alignment:
Q  175 gaccactctaaaactaatttttaccttattacaaatcagtcctcatataaaata 228  Q
    |||||||||||||||||  ||||||||||||||||||| |||||||| ||||||    
T  17244839 gaccactctaaaactaaactttaccttattacaaatcactcctcatacaaaata 17244892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 170 - 226
Target Start/End: Complemental strand, 41644157 - 41644101
Alignment:
Q  170 tggtcgaccactctaaaactaatttttaccttattacaaatcagtcctcatataaaa 226  Q
    |||| |||||||||||||||||  | |||||||||||||||||||||||||| ||||    
T  41644157 tggtggaccactctaaaactaaactctaccttattacaaatcagtcctcatacaaaa 41644101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 178 - 225
Target Start/End: Original strand, 18779179 - 18779226
Alignment:
Q  178 cactctaaaactaatttttaccttattacaaatcagtcctcatataaa 225  Q
    ||||||||||||||  |||||||||||||||||||||| |||||||||    
T  18779179 cactctaaaactaaactttaccttattacaaatcagtcgtcatataaa 18779226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 167 - 228
Target Start/End: Complemental strand, 6178061 - 6178000
Alignment:
Q  167 tgttggtcgaccactctaaaactaatttttaccttattacaaatcagtcctcatataaaata 228  Q
    ||||||| |||||||||| ||||||  |||||||||||||||||||||| || || ||||||    
T  6178061 tgttggtggaccactctagaactaaactttaccttattacaaatcagtcatcgtacaaaata 6178000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 175 - 228
Target Start/End: Complemental strand, 15651127 - 15651074
Alignment:
Q  175 gaccactctaaaactaatttttaccttattacaaatcagtcctcatataaaata 228  Q
    ||||||||||||| |||  ||||| |||||||||||||||||||||| ||||||    
T  15651127 gaccactctaaaattaaactttactttattacaaatcagtcctcatacaaaata 15651074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 175 - 228
Target Start/End: Original strand, 18059131 - 18059184
Alignment:
Q  175 gaccactctaaaactaatttttaccttattacaaatcagtcctcatataaaata 228  Q
    |||||||||||||||||  |||||||| ||||||||||||| ||||| ||||||    
T  18059131 gaccactctaaaactaaactttaccttgttacaaatcagtcatcatacaaaata 18059184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 223 - 388
Target Start/End: Complemental strand, 31797329 - 31797166
Alignment:
Q  223 aaaataggtttaattacacttttggtcctcgtgtattggcctactcacgaaactagtcctacccttttaaaacagaacaaaacggtccttcaattatcat 322  Q
    |||| ||| |||||||||||||||||||||   | ||| ||  ||||||||| | ||| | ||  ||| |||  ||||||||| |||| | || ||| ||    
T  31797329 aaaaaaggcttaattacacttttggtcctcacattttgaccagctcacgaaaatggtcatgcctctttcaaatcgaacaaaaccgtccctaaactat-at 31797231  T
Q  323 ttttgttgcatttttcgtcctacctcctattttcaaactccagaaatgtagagaaatgacagtttt 388  Q
     ||| ||||| |||| |||||||||||||||||| ||||| ||||| | |||||||||||||||||    
T  31797230 gttttttgcagttttagtcctacctcctattttc-aactctagaaacgcagagaaatgacagtttt 31797166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 167 - 228
Target Start/End: Original strand, 34441641 - 34441702
Alignment:
Q  167 tgttggtcgaccactctaaaactaatttttaccttattacaaatcagtcctcatataaaata 228  Q
    ||||||| || |||| |||||||||  |||| ||||||||||||||||||||||| ||||||    
T  34441641 tgttggtggatcactttaaaactaagctttatcttattacaaatcagtcctcatacaaaata 34441702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 322 - 390
Target Start/End: Complemental strand, 14942297 - 14942230
Alignment:
Q  322 tttttgttgcatttttcgtcctacctcctattttcaaactccagaaatgtagagaaatgacagttttag 390  Q
    ||||| ||||| |||| ||||||| |||||||||||| ||||||||||| ||||||||  |||||||||    
T  14942297 ttttttttgcagttttagtcctacatcctattttcaa-ctccagaaatgcagagaaatcgcagttttag 14942230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 170 - 221
Target Start/End: Original strand, 39788374 - 39788425
Alignment:
Q  170 tggtcgaccactctaaaactaatttttaccttattacaaatcagtcctcata 221  Q
    |||| ||||||||||||| |||  ||||||||||||||||||||| ||||||    
T  39788374 tggtggaccactctaaaaataaactttaccttattacaaatcagttctcata 39788425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 179 - 220
Target Start/End: Original strand, 27138794 - 27138835
Alignment:
Q  179 actctaaaactaatttttaccttattacaaatcagtcctcat 220  Q
    ||||||||| ||| |||||||||||||||||| |||||||||    
T  27138794 actctaaaattaaattttaccttattacaaataagtcctcat 27138835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 187 - 228
Target Start/End: Original strand, 40912471 - 40912512
Alignment:
Q  187 actaatttttaccttattacaaatcagtcctcatataaaata 228  Q
    ||||| |||||| |||||||||||||||||||||| ||||||    
T  40912471 actaaattttactttattacaaatcagtcctcatacaaaata 40912512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 232 - 390
Target Start/End: Original strand, 4355758 - 4355915
Alignment:
Q  232 ttaattacacttttggtcctcgtgtattggcctactcacgaaactagtcctacc-cttttaaaacagaacaaaacggtccttcaattatcatttttgttg 330  Q
    |||||||||||||||||||| |  | ||| ||||||||||||| | ||| |||| |||||||| | ||||||||  |||| | || ||| || ||| |||    
T  4355758 ttaattacacttttggtccttgcattttgacctactcacgaaattggtcatacctcttttaaatc-gaacaaaatcgtccctaaactat-atgttttttg 4355855  T
Q  331 catttttcgtcctacct-cctattttcaaactccagaaatgtagagaaatgacagttttag 390  Q
    || |||| |||||| || ||||||||| ||||||||||| | | | |||||||||||||||    
T  4355856 cagttttagtcctatctccctattttc-aactccagaaacgcacataaatgacagttttag 4355915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #56
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 227 - 390
Target Start/End: Complemental strand, 20128285 - 20128123
Alignment:
Q  227 taggtttaattacacttttggtcctcgtgtattggcctactcacgaaactagtcctacc-cttttaaaacagaacaaaacggtccttcaattatcatttt 325  Q
    |||| |||||||||||||||||||| |  | ||  || |||||||||| | |||||||| |||||||| || |||||||  |||||| || ||| || ||    
T  20128285 taggcttaattacacttttggtccttgcatttttaccaactcacgaaattggtcctacctcttttaaatca-aacaaaatcgtccttaaactat-atgtt 20128188  T
Q  326 tgttgcatttttcgtcctacctcctattttcaaactccagaaatgtagagaaatgacagttttag 390  Q
    | ||||| |||| |||||| ||||   |||| ||||||||||| | | | |||||||||||||||    
T  20128187 ttttgcaattttagtcctatctccctatttccaactccagaaacgcacaaaaatgacagttttag 20128123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #57
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 232 - 390
Target Start/End: Complemental strand, 43216252 - 43216095
Alignment:
Q  232 ttaattacacttttggtcctcgtgtattggcctactcacgaaactagtcctacc-cttttaaaacagaacaaaacggtccttcaattatcatttttgttg 330  Q
    |||||||||||||| ||||| | || ||| || |||||||||| | |||||||| |||||||| | ||||||||  |||| | || ||| || ||| |||    
T  43216252 ttaattacacttttagtccttgcgttttgaccaactcacgaaattggtcctacctcttttaaatc-gaacaaaatcgtccctaaactat-atattttttg 43216155  T
Q  331 catttttcgtcctacctc-ctattttcaaactccagaaatgtagagaaatgacagttttag 390  Q
    || |||| |||||| ||| ||| |||| ||||||||||||| | |||||||||| ||||||    
T  43216154 cagttttagtcctatctctcta-tttccaactccagaaatgcacagaaatgacaattttag 43216095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 142; Significance: 2e-74; HSPs: 49)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 142; E-Value: 2e-74
Query Start/End: Original strand, 225 - 413
Target Start/End: Original strand, 50970274 - 50970462
Alignment:
Q  225 aataggtttaattacacttttggtcctcgtgtattggcctactcacgaaactagtcctacccttttaaaacagaacaaaacggtccttcaattatcattt 324  Q
    |||||| ||||||||||||||||||||||||| ||||||||||||||||||| ||||| | |||||||| ||||||||||||||||||||||||||||||    
T  50970274 aataggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgctcttttaaatcagaacaaaacggtccttcaattatcattt 50970373  T
Q  325 ttgttgcatttttcgtcctacctcctattttcaaactccagaaatgtagagaaatgacagttttaggcggntttagacctacccttatg 413  Q
    ||||||||||||||||||||||| |||||||||||||||||||| | ||||||||||||||||| ||||| ||||||||||||| ||||    
T  50970374 ttgttgcatttttcgtcctaccttctattttcaaactccagaaacgcagagaaatgacagtttttggcggttttagacctacccctatg 50970462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 139; E-Value: 1e-72
Query Start/End: Original strand, 232 - 413
Target Start/End: Complemental strand, 17433757 - 17433576
Alignment:
Q  232 ttaattacacttttggtcctcgtgtattggcctactcacgaaactagtcctacccttttaaaacagaacaaaacggtccttcaattatcatttttgttgc 331  Q
    |||||||||||||||||||||||||  |||||||||||||||||| ||| | ||||||||||||||||||||||||||||||||||||||||||||||||    
T  17433757 ttaattacacttttggtcctcgtgttctggcctactcacgaaactggtcatgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgc 17433658  T
Q  332 atttttcgtcctacctcctattttcaaactccagaaatgtagagaaatgacagttttaggcggntttagacctacccttatg 413  Q
    |||||||||||||||||||||||||||||| |||||| | ||||||||||||||||||| ||| ||||||||||||| ||||    
T  17433657 atttttcgtcctacctcctattttcaaacttcagaaacgcagagaaatgacagttttagacggttttagacctacccctatg 17433576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 139; E-Value: 1e-72
Query Start/End: Original strand, 232 - 413
Target Start/End: Original strand, 21856045 - 21856226
Alignment:
Q  232 ttaattacacttttggtcctcgtgtattggcctactcacgaaactagtcctacccttttaaaacagaacaaaacggtccttcaattatcatttttgttgc 331  Q
    ||||||||||||||||||||||||| |||  |||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  21856045 ttaattacacttttggtcctcgtgttttgatctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgc 21856144  T
Q  332 atttttcgtcctacctcctattttcaaactccagaaatgtagagaaatgacagttttaggcggntttagacctacccttatg 413  Q
    ||||||| ||||| ||||||||||||||||||||||| | ||||||||||||||||||||||| ||||||||||||| ||||    
T  21856145 atttttcatcctagctcctattttcaaactccagaaacgcagagaaatgacagttttaggcggttttagacctacccctatg 21856226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 139; E-Value: 1e-72
Query Start/End: Original strand, 232 - 413
Target Start/End: Complemental strand, 29870161 - 29869980
Alignment:
Q  232 ttaattacacttttggtcctcgtgtattggcctactcacgaaactagtcctacccttttaaaacagaacaaaacggtccttcaattatcatttttgttgc 331  Q
    ||||||||||||||||||||||||| |||||||||||| |||||| ||||| || |||||||||||||||||||||||||||||||||||||||||||||    
T  29870161 ttaattacacttttggtcctcgtgttttggcctactcatgaaactggtcctgccattttaaaacagaacaaaacggtccttcaattatcatttttgttgc 29870062  T
Q  332 atttttcgtcctacctcctattttcaaactccagaaatgtagagaaatgacagttttaggcggntttagacctacccttatg 413  Q
    ||||||||||||||||||||||||||||||  ||||| | ||||||||||||||||||||||| ||||||||||||| ||||    
T  29870061 atttttcgtcctacctcctattttcaaactttagaaacgcagagaaatgacagttttaggcggttttagacctacccatatg 29869980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 138; E-Value: 5e-72
Query Start/End: Original strand, 237 - 413
Target Start/End: Original strand, 33143925 - 33144101
Alignment:
Q  237 tacacttttggtcctcgtgtattggcctactcacgaaactagtcctacccttttaaaacagaacaaaacggtccttcaattatcatttttgttgcatttt 336  Q
    |||||||||||||||||||| ||||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||| |||||| ||    
T  33143925 tacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttttttgcatatt 33144024  T
Q  337 tcgtcctacctcctattttcaaactccagaaatgtagagaaatgacagttttaggcggntttagacctacccttatg 413  Q
    |||||||||||||||||||||||||| ||||| | ||||||||||||||||||||||| ||||||||||||| ||||    
T  33144025 tcgtcctacctcctattttcaaactctagaaacgcagagaaatgacagttttaggcggttttagacctacccctatg 33144101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 136; E-Value: 8e-71
Query Start/End: Original strand, 227 - 413
Target Start/End: Original strand, 15646190 - 15646376
Alignment:
Q  227 taggtttaattacacttttggtcctcgtgtattggcctactcacgaaactagtcctacccttttaaaacagaacaaaacggtccttcaattatcattttt 326  Q
    |||| ||||||| ||||||||||||||||| ||||||||||||||||||| ||| | ||||||||||||||||||||| ||| |||||||||||||||||    
T  15646190 taggcttaattatacttttggtcctcgtgttttggcctactcacgaaactggtcatgcccttttaaaacagaacaaaatggtacttcaattatcattttt 15646289  T
Q  327 gttgcatttttcgtcctacctcctattttcaaactccagaaatgtagagaaatgacagttttaggcggntttagacctacccttatg 413  Q
    |||||||||||||||||||||| ||||||||||||||| ||||| ||||||||||||||||||||||| ||||||||||||| ||||    
T  15646290 gttgcatttttcgtcctacctcatattttcaaactccataaatgcagagaaatgacagttttaggcggttttagacctacccctatg 15646376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 135; E-Value: 3e-70
Query Start/End: Original strand, 232 - 413
Target Start/End: Original strand, 5539819 - 5540000
Alignment:
Q  232 ttaattacacttttggtcctcgtgtattggcctactcacgaaactagtcctacccttttaaaacagaacaaaacggtccttcaattatcatttttgttgc 331  Q
    ||||||||||||||||||||||||| ||||||||||||||||| | ||||| |||||||||||||||||||||||||||||||||||||||||||||||     
T  5539819 ttaattacacttttggtcctcgtgttttggcctactcacgaaattggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgt 5539918  T
Q  332 atttttcgtcctacctcctattttcaaactccagaaatgtagagaaatgacagttttaggcggntttagacctacccttatg 413  Q
    ||||||||||||||||||||||||||||||||| ||| | | ||||||| ||||||||||||| ||||||||||||| ||||    
T  5539919 atttttcgtcctacctcctattttcaaactccataaacgcatagaaatggcagttttaggcggttttagacctacccctatg 5540000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 135; E-Value: 3e-70
Query Start/End: Original strand, 232 - 413
Target Start/End: Original strand, 8678544 - 8678725
Alignment:
Q  232 ttaattacacttttggtcctcgtgtattggcctactcacgaaactagtcctacccttttaaaacagaacaaaacggtccttcaattatcatttttgttgc 331  Q
    ||||||||||||||||||||||||| ||||||||||||||||||| ||||| ||||||||||||| ||||||||||||||||||||||||||||||||||    
T  8678544 ttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacaaaacaaaacggtccttcaattatcatttttgttgc 8678643  T
Q  332 atttttcgtcctacctcctattttcaaactccagaaatgtagagaaatgacagttttaggcggntttagacctacccttatg 413  Q
    |||||||||||||||| ||||||||||||| |||||| | | ||||||||||||||||||||| ||||||| ||||| ||||    
T  8678644 atttttcgtcctacctgctattttcaaacttcagaaacgcaaagaaatgacagttttaggcggttttagacatacccctatg 8678725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 135; E-Value: 3e-70
Query Start/End: Original strand, 224 - 413
Target Start/End: Complemental strand, 15173643 - 15173455
Alignment:
Q  224 aaataggtttaattacacttttggtcctcgtgtattggcctactcacgaaactagtcctacccttttaaaacagaacaaaacggtccttcaattatcatt 323  Q
    ||||||| ||||||||||||||||||||||||| ||||||||||||| ||||| ||||| || |||||||||||||||||| ||||||||||||||||||    
T  15173643 aaataggcttaattacacttttggtcctcgtgttttggcctactcacaaaactggtcctgcc-ttttaaaacagaacaaaatggtccttcaattatcatt 15173545  T
Q  324 tttgttgcatttttcgtcctacctcctattttcaaactccagaaatgtagagaaatgacagttttaggcggntttagacctacccttatg 413  Q
    ||||||||||||||||||||||||||||||||||||||| | ||| | ||||||||||||||||||||||| ||||||||||||| ||||    
T  15173544 tttgttgcatttttcgtcctacctcctattttcaaactctataaacgcagagaaatgacagttttaggcggttttagacctacccctatg 15173455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 135; E-Value: 3e-70
Query Start/End: Original strand, 232 - 413
Target Start/End: Complemental strand, 39154562 - 39154381
Alignment:
Q  232 ttaattacacttttggtcctcgtgtattggcctactcacgaaactagtcctacccttttaaaacagaacaaaacggtccttcaattatcatttttgttgc 331  Q
    ||||||||||||||||||||||||| ||||||||||||||||||| ||||| | ||||||||||| ||||||| ||||||||||||||||||||||||||    
T  39154562 ttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgctcttttaaaacataacaaaatggtccttcaattatcatttttgttgc 39154463  T
Q  332 atttttcgtcctacctcctattttcaaactccagaaatgtagagaaatgacagttttaggcggntttagacctacccttatg 413  Q
    |||||||||||||||||||||||||||||| |||||| | |||||||||||| |||||||||| ||||||||||||| ||||    
T  39154462 atttttcgtcctacctcctattttcaaacttcagaaacgcagagaaatgacaattttaggcggttttagacctacccctatg 39154381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 131; E-Value: 8e-68
Query Start/End: Original strand, 232 - 413
Target Start/End: Complemental strand, 4636513 - 4636332
Alignment:
Q  232 ttaattacacttttggtcctcgtgtattggcctactcacgaaactagtcctacccttttaaaacagaacaaaacggtccttcaattatcatttttgttgc 331  Q
    ||||||||||||||||||||||||| |||||||||||||||||||  |||| ||||||||||||||||||||||| ||||||||||||||||||||||||    
T  4636513 ttaattacacttttggtcctcgtgttttggcctactcacgaaactgatcctgcccttttaaaacagaacaaaacgatccttcaattatcatttttgttgc 4636414  T
Q  332 atttttcgtcctacctcctattttcaaactccagaaatgtagagaaatgacagttttaggcggntttagacctacccttatg 413  Q
    ||||||||||| ||||||||||||||||||||||||| | |||||||||||| ||||| |||  ||||||||||||| ||||    
T  4636413 atttttcgtcccacctcctattttcaaactccagaaacgcagagaaatgacaattttatgcgattttagacctacccctatg 4636332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 131; E-Value: 8e-68
Query Start/End: Original strand, 232 - 413
Target Start/End: Complemental strand, 18984661 - 18984480
Alignment:
Q  232 ttaattacacttttggtcctcgtgtattggcctactcacgaaactagtcctacccttttaaaacagaacaaaacggtccttcaattatcatttttgttgc 331  Q
    |||||||||||||||||||| |||| ||||||||||||||||| | ||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  18984661 ttaattacacttttggtccttgtgttttggcctactcacgaaattggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgc 18984562  T
Q  332 atttttcgtcctacctcctattttcaaactccagaaatgtagagaaatgacagttttaggcggntttagacctacccttatg 413  Q
    ||||||||||||||||||||||||||||||| |||||   ||||||||| ||||||||||||| ||||||||| ||| ||||    
T  18984561 atttttcgtcctacctcctattttcaaactctagaaacacagagaaatggcagttttaggcggttttagaccttcccctatg 18984480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 131; E-Value: 8e-68
Query Start/End: Original strand, 232 - 390
Target Start/End: Complemental strand, 29307484 - 29307326
Alignment:
Q  232 ttaattacacttttggtcctcgtgtattggcctactcacgaaactagtcctacccttttaaaacagaacaaaacggtccttcaattatcatttttgttgc 331  Q
    |||||| |||||||||||||||||| ||| ||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  29307484 ttaattgcacttttggtcctcgtgttttgacctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgc 29307385  T
Q  332 atttttcgtcctacctcctattttcaaactccagaaatgtagagaaatgacagttttag 390  Q
    ||||||||||||||||||||||||||||||||||||| | |||||||||||||||||||    
T  29307384 atttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagttttag 29307326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 120; E-Value: 3e-61
Query Start/End: Original strand, 232 - 402
Target Start/End: Original strand, 26859062 - 26859232
Alignment:
Q  232 ttaattacacttttggtcctcgtgtattggcctactcacgaaactagtcctacccttttaaaacagaacaaaacggtccttcaattatcatttttgttgc 331  Q
    |||||||||||||||||||| |||| |||||||||| |||||||| ||||| || |||||||||||||||||||||||||||||||||||||||||||||    
T  26859062 ttaattacacttttggtccttgtgttttggcctactaacgaaactggtcctgccattttaaaacagaacaaaacggtccttcaattatcatttttgttgc 26859161  T
Q  332 atttttcgtcctacctcctattttcaaactccagaaatgtagagaaatgacagttttaggcggntttagac 402  Q
    ||||||||||||||||| ||||||||||||||||||| | |||||| | | |||||||||||| |||||||    
T  26859162 atttttcgtcctacctcatattttcaaactccagaaacgcagagaagtaatagttttaggcggttttagac 26859232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 112; E-Value: 2e-56
Query Start/End: Original strand, 227 - 390
Target Start/End: Complemental strand, 9019510 - 9019347
Alignment:
Q  227 taggtttaattacacttttggtcctcgtgtattggcctactcacgaaactagtcctacccttttaaaacagaacaaaacggtccttcaattatcattttt 326  Q
    |||| ||||||||||||||||||||||||| ||| ||||||||| ||||| || || || ||||||||||||||||||||||| ||||||||||||||||    
T  9019510 taggcttaattacacttttggtcctcgtgttttgacctactcacaaaactggttctgccattttaaaacagaacaaaacggtcattcaattatcattttt 9019411  T
Q  327 gttgcatttttcgtcctacctcctattttcaaactccagaaatgtagagaaatgacagttttag 390  Q
    |||||||||||||||||||||||||||||||||| ||||||| | |||||||| ||||||||||    
T  9019410 gttgcatttttcgtcctacctcctattttcaaaccccagaaacgcagagaaataacagttttag 9019347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 111; E-Value: 7e-56
Query Start/End: Original strand, 232 - 390
Target Start/End: Complemental strand, 15646737 - 15646580
Alignment:
Q  232 ttaattacacttttggtcctcgtgtattggcctactcacgaaactagtcctacccttttaaaacagaacaaaacggtccttcaattatcatttttgttgc 331  Q
    ||||||||||||||||||||||||| |||||||||||||||||||  |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  15646737 ttaattacacttttggtcctcgtgttttggcctactcacgaaactgatcctacccttttaaaacagaacaaaacggtccttcaattatcatttttgttgc 15646638  T
Q  332 atttttcgtcctacctcctattttcaaactccagaaatgtagagaaatgacagttttag 390  Q
    ||||||||||||||| || ||||| |  ||||| ||| | |||||||||||||||||||    
T  15646637 atttttcgtcctacccccaatttt-attctccaaaaacgcagagaaatgacagttttag 15646580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 110; E-Value: 3e-55
Query Start/End: Original strand, 232 - 416
Target Start/End: Original strand, 5962581 - 5962765
Alignment:
Q  232 ttaattacacttttggtcctcgtgtattggcctactcacgaaactagtcctacccttttaaaacagaacaaaacggtccttcaattatcatttttgttgc 331  Q
    ||||||||| |||||||||||||||  ||| ||| |||||||||| ||||  |||||||||||||||||||||||||| ||||| |||||||||||||||    
T  5962581 ttaattacatttttggtcctcgtgttatggtctattcacgaaactggtccggcccttttaaaacagaacaaaacggtctttcaactatcatttttgttgc 5962680  T
Q  332 atttttcgtcctacctcctattttcaaactccagaaatgtagagaaatgacagttttaggcggntttagacctacccttatgatc 416  Q
    ||||||||| |||||||||||||||||||||||||||   |||| |||||||||||||||||| |||| || ||||| |||||||    
T  5962681 atttttcgttctacctcctattttcaaactccagaaacacagagtaatgacagttttaggcggttttaaacttacccctatgatc 5962765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 228 - 390
Target Start/End: Original strand, 15173095 - 15173256
Alignment:
Q  228 aggtttaattacacttttggtcctcgtgtattggcctactcacgaaactagtcctacccttttaaaacagaacaaaacggtccttcaattatcatttttg 327  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||||||||||| |||||||||||  |||||||||||| ||||||||||||||||||    
T  15173095 aggtttaattacacttttggtcctcgtgttttggcctactcacgaaactagtcctgcccttttaaaattgaacaaaacggttcttcaattatcatttttg 15173194  T
Q  328 ttgcatttttcgtcctacctcctattttcaaactccagaaatgtagagaaatgacagttttag 390  Q
    ||||||||||||||||||| || ||||| |  ||||| ||| | |||||||||||||||||||    
T  15173195 ttgcatttttcgtcctaccccccatttt-attctccaaaaacgcagagaaatgacagttttag 15173256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 232 - 390
Target Start/End: Complemental strand, 50970820 - 50970663
Alignment:
Q  232 ttaattacacttttggtcctcgtgtattggcctactcacgaaactagtcctacccttttaaaacagaacaaaacggtccttcaattatcatttttgttgc 331  Q
    ||||||||||||||||||||||||| |||||||||| |||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  50970820 ttaattacacttttggtcctcgtgttttggcctacttacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgc 50970721  T
Q  332 atttttcgtcctacctcctattttcaaactccagaaatgtagagaaatgacagttttag 390  Q
    ||||||||||||||| || ||||| |  ||||| ||| | |||||||||||||||||||    
T  50970720 atttttcgtcctaccccccatttt-attctccaaaaacgcagagaaatgacagttttag 50970663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 105; E-Value: 3e-52
Query Start/End: Original strand, 226 - 390
Target Start/End: Original strand, 18984116 - 18984279
Alignment:
Q  226 ataggtttaattacacttttggtcctcgtgtattggcctactcacgaaactagtcctacccttttaaaacagaacaaaacggtccttcaattatcatttt 325  Q
    ||||| ||||||||||||||||||||||||| |||| |||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||    
T  18984116 ataggcttaattacacttttggtcctcgtgttttggtctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttt 18984215  T
Q  326 tgttgcatttttcgtcctacctcctattttcaaactccagaaatgtagagaaatgacagttttag 390  Q
    ||||||||||||||||||||| || ||||| |  ||||| ||| | |||||||||| ||||||||    
T  18984216 tgttgcatttttcgtcctaccccccatttt-attctccaaaaacgcagagaaatgatagttttag 18984279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 219 - 390
Target Start/End: Complemental strand, 5540373 - 5540203
Alignment:
Q  219 atataaaataggtttaattacacttttggtcctcgtgtattggcctactcacgaaactagtcctacccttttaaaacagaacaaaacggtccttcaatta 318  Q
    |||| ||| ||| ||||||||||||||||||||||||| ||||||||||||||||||| |||||  ||||||||||||||| ||||||||||||||||||    
T  5540373 atattaaaaaggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgtccttttaaaacagaagaaaacggtccttcaatta 5540274  T
Q  319 tcatttttgttgcatttttcgtcctacctcctattttcaaactccagaaatgtagagaaatgacagttttag 390  Q
    |||||||||||||||||||||||||||| || ||||| |  ||||| ||| | |||||||||||||||||||    
T  5540273 tcatttttgttgcatttttcgtcctaccccccatttt-attctccaaaaacgcagagaaatgacagttttag 5540203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 103; E-Value: 4e-51
Query Start/End: Original strand, 232 - 390
Target Start/End: Complemental strand, 8679083 - 8678927
Alignment:
Q  232 ttaattacacttttggtcctcgtgtattggcctactcacgaaactagtcctacccttttaaaacagaacaaaacggtccttcaattatcatttttgttgc 331  Q
    ||||||||||||||||||||||||| |||||||||||||| |||| ||||| ||||||||||||||||||||| |||| |||||||||||||||||||||    
T  8679083 ttaattacacttttggtcctcgtgttttggcctactcacggaactggtcctgcccttttaaaacagaacaaaaaggtcattcaattatcatttttgttgc 8678984  T
Q  332 atttttcgtcctacctcctattttcaaactccagaaatgtagagaaatgacagttttag 390  Q
    |||||||||||||||||| ||||| |  ||||| ||||| |||||||||||||||||||    
T  8678983 atttttcgtcctacctcc-atttt-attctccaaaaatgcagagaaatgacagttttag 8678927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 232 - 390
Target Start/End: Original strand, 29306956 - 29307113
Alignment:
Q  232 ttaattacacttttggtcctcgtgtattggcctactcacgaaactagtcctacccttttaaaacagaacaaaacggtccttcaattatcatttttgttgc 331  Q
    ||||||||||||||| ||||||||| ||||||||||||||||||| ||| |  |||||||||||||||||||||||||||||||||||||||||||||||    
T  29306956 ttaattacacttttgatcctcgtgttttggcctactcacgaaactggtcatgtccttttaaaacagaacaaaacggtccttcaattatcatttttgttgc 29307055  T
Q  332 atttttcgtcctacctcctattttcaaactccagaaatgtagagaaatgacagttttag 390  Q
    ||||||||||||||| || ||||| |  ||||| ||| | |||||||||||||||||||    
T  29307056 atttttcgtcctaccccccatttt-attctccaaaaacgcagagaaatgacagttttag 29307113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 232 - 390
Target Start/End: Complemental strand, 33144461 - 33144304
Alignment:
Q  232 ttaattacacttttggtcctcgtgtattggcctactcacgaaactagtcctacccttttaaaacagaacaaaacggtccttcaattatcatttttgttgc 331  Q
    ||||||||||||||||||||||||| ||||||||||||||||||| ||||| ||||||||||||||||||||| || ||||||| |||||||||||||||    
T  33144461 ttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaatggaccttcaaatatcatttttgttgc 33144362  T
Q  332 atttttcgtcctacctcctattttcaaactccagaaatgtagagaaatgacagttttag 390  Q
    ||||||||||||||| || ||||| |  ||||| ||| | |||||||||||||||||||    
T  33144361 atttttcgtcctaccccccatttt-attctccaaaaacgcagagaaatgacagttttag 33144304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 228 - 390
Target Start/End: Complemental strand, 5963124 - 5962963
Alignment:
Q  228 aggtttaattacacttttggtcctcgtgtattggcctactcacgaaactagtcctacccttttaaaacagaacaaaacggtccttcaattatcatttttg 327  Q
    ||||||||||||||||||||||||||||| |||||||||||||||||||  || | ||||||||||| |||||||||| ||| |||||||||||||||||    
T  5963124 aggtttaattacacttttggtcctcgtgttttggcctactcacgaaactgatcatgcccttttaaaatagaacaaaacagtctttcaattatcatttttg 5963025  T
Q  328 ttgcatttttcgtcctacctcctattttcaaactccagaaatgtagagaaatgacagttttag 390  Q
    ||||||||||||||||||| || ||||| |  ||||| ||| | |||||||||||||||||||    
T  5963024 ttgcatttttcgtcctaccccccatttt-attctccaaaaacgcagagaaatgacagttttag 5962963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 232 - 390
Target Start/End: Original strand, 29869623 - 29869780
Alignment:
Q  232 ttaattacacttttggtcctcgtgtattggcctactcacgaaactagtcctacccttttaaaacagaacaaaacggtccttcaattatcatttttgttgc 331  Q
    ||||||||||||||||||||||||| ||||| ||||||||||||| ||| | |||||||||||||||||||||||||||||||||||| |||||||||||    
T  29869623 ttaattacacttttggtcctcgtgttttggcatactcacgaaactggtcttgcccttttaaaacagaacaaaacggtccttcaattattatttttgttgc 29869722  T
Q  332 atttttcgtcctacctcctattttcaaactccagaaatgtagagaaatgacagttttag 390  Q
    ||||||||||||||  || ||||| |  ||||| ||| | |||||||||||||||||||    
T  29869723 atttttcgtcctacaccccatttt-attctccaaaaacgcagagaaatgacagttttag 29869780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 93; E-Value: 4e-45
Query Start/End: Original strand, 226 - 346
Target Start/End: Complemental strand, 26859607 - 26859487
Alignment:
Q  226 ataggtttaattacacttttggtcctcgtgtattggcctactcacgaaactagtcctacccttttaaaacagaacaaaacggtccttcaattatcatttt 325  Q
    ||||| ||||||||||||||| ||||||||| |||| ||||||||||||||| |||| ||||||||||||||||||| ||||||||||||||||||||||    
T  26859607 ataggcttaattacacttttgatcctcgtgttttgggctactcacgaaactaatcctgcccttttaaaacagaacaatacggtccttcaattatcatttt 26859508  T
Q  326 tgttgcatttttcgtcctacc 346  Q
    |||||||||||||||||||||    
T  26859507 tgttgcatttttcgtcctacc 26859487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 89; E-Value: 9e-43
Query Start/End: Original strand, 227 - 355
Target Start/End: Original strand, 9018971 - 9019099
Alignment:
Q  227 taggtttaattacacttttggtcctcgtgtattggcctactcacgaaactagtcctacccttttaaaacagaacaaaacggtccttcaattatcattttt 326  Q
    |||| ||||||||||||||||||||||||| |||||||||| |||||||| || || |||||||||||||||||||||||||| ||||| ||||||||||    
T  9018971 taggcttaattacacttttggtcctcgtgttttggcctactaacgaaactggttctgcccttttaaaacagaacaaaacggtcattcaactatcattttt 9019070  T
Q  327 gttgcatttttcgtcctacctcctatttt 355  Q
    |||||||||||||||||||| || |||||    
T  9019071 gttgcatttttcgtcctaccccccatttt 9019099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 284 - 413
Target Start/End: Original strand, 17112336 - 17112465
Alignment:
Q  284 cccttttaaaacagaacaaaacggtccttcaattatcatttttgttgcatttttcgtcctacctcctattttcaaactccagaaatgtagagaaatgaca 383  Q
    ||||||||||| |||| ||||  |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| | ||| |||||| |    
T  17112336 cccttttaaaatagaataaaatagtccttcaattatcatttttattgcatttttcgtcctacctcctattttcaaactccagaaacgcagaaaaatgata 17112435  T
Q  384 gttttaggcggntttagacctacccttatg 413  Q
    ||||||||||| ||||||||||||| ||||    
T  17112436 gttttaggcggttttagacctacccctatg 17112465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 232 - 390
Target Start/End: Complemental strand, 21856585 - 21856428
Alignment:
Q  232 ttaattacacttttggtcctcgtgtattggcctactcacgaaactagtcctacccttttaaaacagaacaaaacggtccttcaattatcatttttgttgc 331  Q
    ||||||||||||||||||||||||| |||||||||||| ||||||  |||| || ||||||||||||||||||||||||||||| ||||||||||| |||    
T  21856585 ttaattacacttttggtcctcgtgttttggcctactcatgaaactgatcctgcctttttaaaacagaacaaaacggtccttcaagtatcatttttgctgc 21856486  T
Q  332 atttttcgtcctacctcctattttcaaactccagaaatgtagagaaatgacagttttag 390  Q
    ||||||||||||||  || ||||| |  ||||| ||| | |||||||||||||||||||    
T  21856485 atttttcgtcctactccccatttt-attctccaaaaacgcagagaaatgacagttttag 21856428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 232 - 390
Target Start/End: Original strand, 17433219 - 17433376
Alignment:
Q  232 ttaattacacttttggtcctcgtgtattggcctactcacgaaactagtcctacccttttaaaacagaacaaaacggtccttcaattatcatttttgttgc 331  Q
    ||||||||||||||||||||| ||| |||||||||||| ||||||   | | |||||||||||||||||||||||||||||||| |||||||||||||||    
T  17433219 ttaattacacttttggtcctcatgttttggcctactcatgaaactgaccatgcccttttaaaacagaacaaaacggtccttcaagtatcatttttgttgc 17433318  T
Q  332 atttttcgtcctacctcctattttcaaactccagaaatgtagagaaatgacagttttag 390  Q
    ||||||| ||||||| || ||||| |  ||||| ||| | |||||||||||||||||||    
T  17433319 atttttcatcctaccccccatttt-attctccaaaaacgcagagaaatgacagttttag 17433376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 79; E-Value: 9e-37
Query Start/End: Original strand, 232 - 346
Target Start/End: Original strand, 39154022 - 39154136
Alignment:
Q  232 ttaattacacttttggtcctcgtgtattggcctactcacgaaactagtcctacccttttaaaacagaacaaaacggtccttcaattatcatttttgttgc 331  Q
    |||||||||||||||||| || ||| ||||| |||||||||||||  || | |||||||||||||||||||||||||||| |||||||||||||||||||    
T  39154022 ttaattacacttttggtcatcatgttttggcatactcacgaaactgatcatgcccttttaaaacagaacaaaacggtcctgcaattatcatttttgttgc 39154121  T
Q  332 atttttcgtcctacc 346  Q
    |||||||||||||||    
T  39154122 atttttcgtcctacc 39154136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 232 - 355
Target Start/End: Original strand, 52268293 - 52268416
Alignment:
Q  232 ttaattacacttttggtcctcgtgtattggcctactcacgaaactagtcctacccttttaaaacagaacaaaacggtccttcaattatcatttttgttgc 331  Q
    ||||||||||||||||||||||| | ||||||| ||||||||| | ||||| |||||||||||||||||||||| ||| |||| ||||||||||||||||    
T  52268293 ttaattacacttttggtcctcgtattttggcctgctcacgaaattggtcctgcccttttaaaacagaacaaaactgtcattcagttatcatttttgttgc 52268392  T
Q  332 atttttcgtcctacctcctatttt 355  Q
    | ||||||||||||| || |||||    
T  52268393 acttttcgtcctaccccccatttt 52268416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 232 - 345
Target Start/End: Complemental strand, 52269290 - 52269177
Alignment:
Q  232 ttaattacacttttggtcctcgtgtattggcctactcacgaaactagtcctacccttttaaaacagaacaaaacggtccttcaattatcatttttgttgc 331  Q
    ||||||||||||||||||||||||| ||| | |||||| ||||   || || |||||||||||||||||||||  ||| |||| ||||||||||||||||    
T  52269290 ttaattacacttttggtcctcgtgttttgacttactcatgaaatcggttctgcccttttaaaacagaacaaaaatgtcattcagttatcatttttgttgc 52269191  T
Q  332 atttttcgtcctac 345  Q
    | ||||||||||||    
T  52269190 acttttcgtcctac 52269177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 227 - 315
Target Start/End: Complemental strand, 2733504 - 2733416
Alignment:
Q  227 taggtttaattacacttttggtcctcgtgtattggcctactcacgaaactagtcctacccttttaaaacagaacaaaacggtccttcaa 315  Q
    |||| ||||||| |||||||||||| |||| |||||||| || ||||| | ||||| ||||||||||||||||||||||||||||||||    
T  2733504 taggcttaattatacttttggtccttgtgttttggcctattcgcgaaattggtcctgcccttttaaaacagaacaaaacggtccttcaa 2733416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 176 - 228
Target Start/End: Complemental strand, 15964378 - 15964326
Alignment:
Q  176 accactctaaaactaatttttaccttattacaaatcagtcctcatataaaata 228  Q
    |||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  15964378 accactctaaaactaaattttaccttattacaaatcagtcctcatataaaata 15964326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 237 - 329
Target Start/End: Complemental strand, 47827125 - 47827033
Alignment:
Q  237 tacacttttggtcctcgtgtattggcctactcacgaaactagtcctacccttttaaaacagaacaaaacggtccttcaattatcatttttgtt 329  Q
    |||||||||| ||  | ||| ||||||||||||||||| | ||| | |||||||||||||||||||||  |||||| ||||||||||||||||    
T  47827125 tacacttttgatctccttgttttggcctactcacgaaaatggtcatgcccttttaaaacagaacaaaattgtcctttaattatcatttttgtt 47827033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 289 - 390
Target Start/End: Original strand, 4636033 - 4636132
Alignment:
Q  289 ttaaaacagaacaaaacggtccttcaattatcatttttgttgcatttttcgtcctacctcctattttcaaactccagaaatgtagagaaatgacagtttt 388  Q
    ||||||||||||||| ||||||||||| ||||||||||||||||||||| || ||||| || ||||| |  || || ||| | |||||||||||||||||    
T  4636033 ttaaaacagaacaaa-cggtccttcaagtatcatttttgttgcattttttgttctaccccccatttt-attcttcaaaaacgcagagaaatgacagtttt 4636130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 232 - 304
Target Start/End: Original strand, 47826967 - 47827039
Alignment:
Q  232 ttaattacacttttggtcctcgtgtattggcctactcacgaaactagtcctacccttttaaaacagaacaaaa 304  Q
    ||||||||||||||||||||||||| |||| |||||||||||| | ||| | ||||||||||| | |||||||    
T  47826967 ttaattacacttttggtcctcgtgttttggtctactcacgaaaatggtcatgcccttttaaaatataacaaaa 47827039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 322 - 390
Target Start/End: Original strand, 17088243 - 17088310
Alignment:
Q  322 tttttgttgcatttttcgtcctacctcctattttcaaactccagaaatgtagagaaatgacagttttag 390  Q
    ||||| ||||| |||| |||||||||||||||||| |||| |||||||| ||||||||| |||||||||    
T  17088243 ttttttttgcaattttagtcctacctcctattttc-aacttcagaaatgcagagaaatggcagttttag 17088310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 227 - 379
Target Start/End: Complemental strand, 45048683 - 45048533
Alignment:
Q  227 taggtttaattacacttttggtcctcgtgtattggcctactcacgaaactagtcctacccttttaaaacagaacaaaacggtccttcaattatcattttt 326  Q
    |||||||||||||||||||||||||||  | ||| ||   |||||||| | ||| ||||  |||  ||  ||||||||| |||||  || |||||| |||    
T  45048683 taggtttaattacacttttggtcctcgcattttgaccagttcacgaaaatggtcatacctctttccaatcgaacaaaaccgtccta-aactatcatgttt 45048585  T
Q  327 gttgcatttttcgtcctacctcctattttcaaactccagaaatgtagagaaat 379  Q
     ||||| |||| |||||||||||||||||| ||||||||||| | ||||||||    
T  45048584 tttgcagttttagtcctacctcctattttc-aactccagaaacgcagagaaat 45048533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 170 - 228
Target Start/End: Original strand, 13876683 - 13876741
Alignment:
Q  170 tggtcgaccactctaaaactaatttttaccttattacaaatcagtcctcatataaaata 228  Q
    |||| |||||||||||||||||  |||||||||||||||||| || |||||| ||||||    
T  13876683 tggtggaccactctaaaactaaactttaccttattacaaatcggtactcatacaaaata 13876741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 170 - 228
Target Start/End: Complemental strand, 16135607 - 16135549
Alignment:
Q  170 tggtcgaccactctaaaactaatttttaccttattacaaatcagtcctcatataaaata 228  Q
    |||| |||||||||||||||||  |||||| |||||||||||||| |||||| ||||||    
T  16135607 tggtggaccactctaaaactaaactttaccctattacaaatcagttctcatacaaaata 16135549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 169 - 221
Target Start/End: Original strand, 3120625 - 3120677
Alignment:
Q  169 ttggtcgaccactctaaaactaatttttaccttattacaaatcagtcctcata 221  Q
    ||||| ||||||||||| | |||  ||||||||||||||||||||||||||||    
T  3120625 ttggtggaccactctaagattaaactttaccttattacaaatcagtcctcata 3120677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 328 - 390
Target Start/End: Complemental strand, 17088587 - 17088526
Alignment:
Q  328 ttgcatttttcgtcctacctcctattttcaaactccagaaatgtagagaaatgacagttttag 390  Q
    ||||| |||| || |||||||||||||||||| || ||||| | |||||||||||||||||||    
T  17088587 ttgcagttttagttctacctcctattttcaaa-tctagaaacgcagagaaatgacagttttag 17088526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 178 - 228
Target Start/End: Complemental strand, 27118606 - 27118556
Alignment:
Q  178 cactctaaaactaatttttaccttattacaaatcagtcctcatataaaata 228  Q
    |||||||||||||   |||||||||||||||||||||| ||||| ||||||    
T  27118606 cactctaaaactatactttaccttattacaaatcagtcatcatacaaaata 27118556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 183 - 228
Target Start/End: Complemental strand, 16127788 - 16127743
Alignment:
Q  183 taaaactaatttttaccttattacaaatcagtcctcatataaaata 228  Q
    |||||||||  |||||||||||||||| |||||||||| |||||||    
T  16127788 taaaactaaactttaccttattacaaaccagtcctcatttaaaata 16127743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 167 - 228
Target Start/End: Complemental strand, 25943485 - 25943424
Alignment:
Q  167 tgttggtcgaccactctaaaactaatttttaccttattacaaatcagtcctcatataaaata 228  Q
    ||||||| ||||||||||  ||||| ||||| ||||||||||||||||| || || ||||||    
T  25943485 tgttggtggaccactctactactaaattttatcttattacaaatcagtcatcgtacaaaata 25943424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 175 - 228
Target Start/End: Complemental strand, 47555034 - 47554981
Alignment:
Q  175 gaccactctaaaactaatttttaccttattacaaatcagtcctcatataaaata 228  Q
    ||||||||||| | |||  |||||||||||||||||||||| ||||| ||||||    
T  47555034 gaccactctaagagtaaactttaccttattacaaatcagtcatcatacaaaata 47554981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0417 (Bit Score: 135; Significance: 3e-70; HSPs: 2)
Name: scaffold0417
Description:

Target: scaffold0417; HSP #1
Raw Score: 135; E-Value: 3e-70
Query Start/End: Original strand, 232 - 409
Target Start/End: Complemental strand, 11165 - 10988
Alignment:
Q  232 ttaattacacttttggtcctcgtgtattggcctactcacgaaactagtcctacccttttaaaacagaacaaaacggtccttcaattatcatttttgttgc 331  Q
    ||||||||||||||||||||||||| |||||||||| |||||||| ||||| ||||||||||||| ||||||||||||||||||||||||||||||||||    
T  11165 ttaattacacttttggtcctcgtgttttggcctacttacgaaactggtcctgcccttttaaaacataacaaaacggtccttcaattatcatttttgttgc 11066  T
Q  332 atttttcgtcctacctcctattttcaaactccagaaatgtagagaaatgacagttttaggcggntttagacctaccct 409  Q
    ||||||||||||||||||||||||||||||| ||||| | ||||||||  ||||||||||||| ||||||||||||||    
T  11065 atttttcgtcctacctcctattttcaaactcgagaaacgcagagaaattgcagttttaggcggttttagacctaccct 10988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0417; HSP #2
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 248 - 390
Target Start/End: Original strand, 10640 - 10781
Alignment:
Q  248 tcctcgtgtattggcctactcacgaaactagtcctacccttttaaaacagaacaaaacggtccttcaattatcatttttgttgcatttttcgtcctacct 347  Q
    ||||||||| |||||||||||| |||||| ||||| |||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||||     
T  10640 tcctcgtgttttggcctactcatgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaagtatcattttcgttgcatttttcgtcctaccc 10739  T
Q  348 cctattttcaaactccagaaatgtagagaaatgacagttttag 390  Q
     | ||||| |  ||||| ||||| |||||||||||||||||||    
T  10740 tccatttt-attctccaaaaatgcagagaaatgacagttttag 10781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007 (Bit Score: 129; Significance: 1e-66; HSPs: 3)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 129; E-Value: 1e-66
Query Start/End: Original strand, 228 - 407
Target Start/End: Complemental strand, 64851 - 64672
Alignment:
Q  228 aggtttaattacacttttggtcctcgtgtattggcctactcacgaaactagtcctacccttttaaaacagaacaaaacggtccttcaattatcatttttg 327  Q
    ||||||||||||||||||||||||||||| ||||| ||||||||||||| ||||  ||||||||||||||||||||||||||||| ||||||||||||||    
T  64851 aggtttaattacacttttggtcctcgtgttttggcatactcacgaaactggtcccgcccttttaaaacagaacaaaacggtcctttaattatcatttttg 64752  T
Q  328 ttgcatttttcgtcctacctcctattttcaaactccagaaatgtagagaaatgacagttttaggcggntttagacctacc 407  Q
    ||||||||||||||||| || |||||||||||||||||||| | ||| |||| |||||||||||||| ||||||||||||    
T  64751 ttgcatttttcgtcctatcttctattttcaaactccagaaacggagaaaaataacagttttaggcggttttagacctacc 64672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007; HSP #2
Raw Score: 91; E-Value: 6e-44
Query Start/End: Original strand, 232 - 390
Target Start/End: Original strand, 64305 - 64462
Alignment:
Q  232 ttaattacacttttggtcctcgtgtattggcctactcacgaaactagtcctacccttttaaaacagaacaaaacggtccttcaattatcatttttgttgc 331  Q
    ||||||||||||||||||||||||| ||| | |||||||||||||  ||||  |||||||||||||||||||||||||||||||||||||||||||||||    
T  64305 ttaattacacttttggtcctcgtgttttgacatactcacgaaactgatcctgaccttttaaaacagaacaaaacggtccttcaattatcatttttgttgc 64404  T
Q  332 atttttcgtcctacctcctattttcaaactccagaaatgtagagaaatgacagttttag 390  Q
    |||||||||| |||| || ||||| |  ||||| ||| | |||||||||||||||||||    
T  64405 atttttcgtcataccccccatttt-attctccaaaaacgcagagaaatgacagttttag 64462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007; HSP #3
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 232 - 390
Target Start/End: Complemental strand, 205910 - 205754
Alignment:
Q  232 ttaattacacttttggtcctcgtgtattggcctactcacgaaactagtcctacccttttaaaacagaacaaaacggtccttcaattatcatttttgttgc 331  Q
    |||||||||||||| ||||||   | ||| || |||||||||| | ||||| ||  ||| |||  ||||||||| |||| | || |||||| ||| ||||    
T  205910 ttaattacacttttagtcctcacattttgaccaactcacgaaaatggtcctgcctctttcaaatcgaacaaaaccgtccctaaactatcatgttt-ttgc 205812  T
Q  332 atttttcgtcctacctcctattttcaaactccagaaatgtagagaaatgacagttttag 390  Q
    | |||| ||||||| |||||||||| ||||||| ||| | ||||||||| |||||||||    
T  205811 agttttagtcctacgtcctattttc-aactccaaaaacgcagagaaatggcagttttag 205754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1223 (Bit Score: 115; Significance: 3e-58; HSPs: 2)
Name: scaffold1223
Description:

Target: scaffold1223; HSP #1
Raw Score: 115; E-Value: 3e-58
Query Start/End: Original strand, 232 - 390
Target Start/End: Complemental strand, 1283 - 1125
Alignment:
Q  232 ttaattacacttttggtcctcgtgtattggcctactcacgaaactagtcctacccttttaaaacagaacaaaacggtccttcaattatcatttttgttgc 331  Q
    |||||||||||||| |||||||||| ||||| ||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  1283 ttaattacacttttagtcctcgtgttttggcttactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgc 1184  T
Q  332 atttttcgtcctacctcctattttcaaactccagaaatgtagagaaatgacagttttag 390  Q
    || |||||||||||||||||||||||||| ||||||| | ||| ||||| |||||||||    
T  1183 atctttcgtcctacctcctattttcaaaccccagaaacgcagaaaaatggcagttttag 1125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1223; HSP #2
Raw Score: 91; E-Value: 6e-44
Query Start/End: Original strand, 232 - 390
Target Start/End: Original strand, 756 - 912
Alignment:
Q  232 ttaattacacttttggtcctcgtgtattggcctactcacgaaactagtcctacccttttaaaacagaacaaaacggtccttcaattatcatttttgttgc 331  Q
    |||||||||||||||||| |||||| ||||||||||||||| ||| ||||| |||||||||||||||||||||||||||||||||||||| |||||||||    
T  756 ttaattacacttttggtcttcgtgttttggcctactcacgatactggtcctgcccttttaaaacagaacaaaacggtccttcaattatca-ttttgttgc 854  T
Q  332 atttttcgtcctacctcctattttcaaactccagaaatgtagagaaatgacagttttag 390  Q
    ||||||||||||||| || ||||| |  ||||| ||| | |||||||| ||||||||||    
T  855 atttttcgtcctaccccccatttt-attctccaaaaacgcagagaaataacagttttag 912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0273 (Bit Score: 111; Significance: 7e-56; HSPs: 2)
Name: scaffold0273
Description:

Target: scaffold0273; HSP #1
Raw Score: 111; E-Value: 7e-56
Query Start/End: Original strand, 268 - 413
Target Start/End: Original strand, 4242 - 4387
Alignment:
Q  268 cacgaaactagtcctacccttttaaaacagaacaaaacggtccttcaattatcatttttgttgcatttttcgtcctacctcctattttcaaactccagaa 367  Q
    ||||||||| ||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| | ||    
T  4242 cacgaaactggtcctgcccttttaaaacaaaacaaaacggtccttcaattatcatttttgttgcatttttcgttctacctcctattttcaaactctaaaa 4341  T
Q  368 atgtagagaaatgacagttttaggcggntttagacctacccttatg 413  Q
    ||| ||||||||||||||||||||||| ||||||||||||| ||||    
T  4342 atgcagagaaatgacagttttaggcggttttagacctacccctatg 4387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0273; HSP #2
Raw Score: 96; E-Value: 6e-47
Query Start/End: Original strand, 227 - 390
Target Start/End: Complemental strand, 4754 - 4592
Alignment:
Q  227 taggtttaattacacttttggtcctcgtgtattggcctactcacgaaactagtcctacccttttaaaacagaacaaaacggtccttcaattatcattttt 326  Q
    |||| |||||||||||||||||| |||||| ||||| ||||||||||||| ||||| ||||||||||||||||||||||||||||| |||||||||||||    
T  4754 taggcttaattacacttttggtcttcgtgttttggcatactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcctttaattatcattttt 4655  T
Q  327 gttgcatttttcgtcctacctcctattttcaaactccagaaatgtagagaaatgacagttttag 390  Q
    |||||||||||||||||||| || ||||| |  ||||| |||   |||||||||||||||||||    
T  4654 gttgcatttttcgtcctaccccccatttt-attctccaaaaacacagagaaatgacagttttag 4592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0295 (Bit Score: 105; Significance: 3e-52; HSPs: 2)
Name: scaffold0295
Description:

Target: scaffold0295; HSP #1
Raw Score: 105; E-Value: 3e-52
Query Start/End: Original strand, 232 - 408
Target Start/End: Complemental strand, 5333 - 5161
Alignment:
Q  232 ttaattacacttttggtcctcgtgtattggcctactcacgaaactagtcctacccttttaaaacagaacaaaacggtccttcaattatcatttttgttgc 331  Q
    ||||||||||||||||||||||||| |||||||| |||||||||| ||| |  ||||||||||||||| ||||||||  |||||||||||||||||||||    
T  5333 ttaattacacttttggtcctcgtgttttggcctagtcacgaaactggtcttgtccttttaaaacagaataaaacggtaattcaattatcatttttgttgc 5234  T
Q  332 atttttcgtcctacctcctattttcaaactccagaaatgtagagaaatgacagttttaggcggntttagacctaccc 408  Q
    |||||||||    |||||||||||||||||||||||| | ||| ||||||||||||||||||| ||||||| |||||    
T  5233 atttttcgt----cctcctattttcaaactccagaaacgcagaaaaatgacagttttaggcggttttagacttaccc 5161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0295; HSP #2
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 227 - 390
Target Start/End: Original strand, 4791 - 4953
Alignment:
Q  227 taggtttaattacacttttggtcctcgtgtattggcctactcacgaaactagtcctacccttttaaaacagaacaaaacggtccttcaattatcattttt 326  Q
    |||| ||||||||||||||||||||||||| ||||||||||||||||||| ||| | |||||||||||||||||||||||||||||||||||||||||||    
T  4791 taggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcatgcccttttaaaacagaacaaaacggtccttcaattatcattttt 4890  T
Q  327 gttgcatttttcgtcctacctcctattttcaaactccagaaatgtagagaaatgacagttttag 390  Q
    |||||||||||||||||||| || ||||| |  ||||| ||| | |||||||| ||||||||||    
T  4891 gttgcatttttcgtcctaccccccatttt-attctccaaaaacgcagagaaataacagttttag 4953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0157 (Bit Score: 105; Significance: 3e-52; HSPs: 2)
Name: scaffold0157
Description:

Target: scaffold0157; HSP #1
Raw Score: 105; E-Value: 3e-52
Query Start/End: Original strand, 246 - 413
Target Start/End: Complemental strand, 17024 - 16857
Alignment:
Q  246 ggtcctcgtgtattggcctactcacgaaactagtcctacccttttaaaacagaacaaaacggtccttcaattatcatttttgttgcatttttcgtcctac 345  Q
    ||||||||||| ||| | |||||||||||||  |||  || ||||||||||||||||||  |||||||||||||||||||||||||||||||||||||||    
T  17024 ggtcctcgtgttttgacttactcacgaaactgatcccgccattttaaaacagaacaaaattgtccttcaattatcatttttgttgcatttttcgtcctac 16925  T
Q  346 ctcctattttcaaactccagaaatgtagagaaatgacagttttaggcggntttagacctacccttatg 413  Q
    ||||||||||||||||||||||| | |||||||| |||||||||||||  ||||||||||||| ||||    
T  16924 ctcctattttcaaactccagaaacgcagagaaattacagttttaggcgattttagacctacccctatg 16857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0157; HSP #2
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 297 - 390
Target Start/End: Original strand, 16564 - 16656
Alignment:
Q  297 gaacaaaacggtccttcaattatcatttttgttgcatttttcgtcctacctcctattttcaaactccagaaatgtagagaaatgacagttttag 390  Q
    ||||||||||||||||||| ||||||||||||||||||||||||| |||| || ||||| |  ||||| ||| | |||||||||||||||||||    
T  16564 gaacaaaacggtccttcaagtatcatttttgttgcatttttcgtcataccccccatttt-attctccaaaaacgcagagaaatgacagttttag 16656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0027 (Bit Score: 103; Significance: 4e-51; HSPs: 2)
Name: scaffold0027
Description:

Target: scaffold0027; HSP #1
Raw Score: 103; E-Value: 4e-51
Query Start/End: Original strand, 228 - 390
Target Start/End: Original strand, 42168 - 42330
Alignment:
Q  228 aggtttaattacacttttggtcctcgtgtattggcctactcacgaaactagtcctacccttttaaaacagaacaaaacggtccttcaattatcatttttg 327  Q
    |||||||||||||||||| || ||||||| |||| ||| ||||||||||  |||| || ||||||||||||||||||||||| |||||||||||||||||    
T  42168 aggtttaattacacttttagttctcgtgttttggtctaatcacgaaactgatcctgccattttaaaacagaacaaaacggtcattcaattatcatttttg 42267  T
Q  328 ttgcatttttcgtcctacctcctattttcaaactccagaaatgtagagaaatgacagttttag 390  Q
    |||||||||| ||| ||||||||||||||||||| |||||| | |||||||||||||||||||    
T  42268 ttgcattttttgtcatacctcctattttcaaacttcagaaacgcagagaaatgacagttttag 42330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0027; HSP #2
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 227 - 390
Target Start/End: Complemental strand, 42705 - 42544
Alignment:
Q  227 taggtttaattacacttttggtcctcgtgtattggcctactcacgaaactagtcctacccttttaaaacagaacaaaacggtccttcaattatcattttt 326  Q
    |||| ||||||| |||||||| |||||||| |||| ||||||| ||||||  | || ||||||||||||||||||||||||||||||| |||||||||||    
T  42705 taggcttaattatacttttggncctcgtgttttggtctactcaggaaactgattctgcccttttaaaacagaacaaaacggtccttcagttatcattttt 42606  T
Q  327 gttgcatttttcgtcctacctcctattttcaaactccagaaatgtagagaaatgacagttttag 390  Q
    ||| |||||||||||||||| || ||||| |  ||||| ||| | |||||||||||||||||||    
T  42605 gtttcatttttcgtcctacc-cccatttt-attctccaaaaacgcagagaaatgacagttttag 42544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0019 (Bit Score: 100; Significance: 3e-49; HSPs: 1)
Name: scaffold0019
Description:

Target: scaffold0019; HSP #1
Raw Score: 100; E-Value: 3e-49
Query Start/End: Original strand, 227 - 390
Target Start/End: Complemental strand, 134220 - 134058
Alignment:
Q  227 taggtttaattacacttttggtcctcgtgtattggcctactcacgaaactagtcctacccttttaaaacagaacaaaacggtccttcaattatcattttt 326  Q
    |||| ||||||||||||||||||||||||| ||||||||||||||||||||||| | ||||||||| ||||||||||||| ||||||||||| |||||||    
T  134220 taggcttaattacacttttggtcctcgtgttttggcctactcacgaaactagtcatgcccttttaatacagaacaaaacgatccttcaattaacattttt 134121  T
Q  327 gttgcatttttcgtcctacctcctattttcaaactccagaaatgtagagaaatgacagttttag 390  Q
    |||||||||||||||||||| || ||||| |  ||||| ||| | |||||||||||||||||||    
T  134120 gttgcatttttcgtcctaccccccatttt-attctccaaaaacgcagagaaatgacagttttag 134058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0432 (Bit Score: 94; Significance: 1e-45; HSPs: 2)
Name: scaffold0432
Description:

Target: scaffold0432; HSP #1
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 232 - 389
Target Start/End: Complemental strand, 10414 - 10259
Alignment:
Q  232 ttaattacacttttggtcctcgtgtattggcctactcacgaaactagtcctacccttttaaaacagaacaaaacggtccttcaattatcatttttgttgc 331  Q
    ||||||||||||||||||||||||| |||| |||||||||||||| ||  | ||||||||||||||||||||||||||||||||||||||||||||||||    
T  10414 ttaattacacttttggtcctcgtgttttggtctactcacgaaactggtgtttcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgc 10315  T
Q  332 atttttcgtcctacctcctattttcaaactccagaaatgtagagaaatgacagtttta 389  Q
    ||||||||||||||| || ||||| |  ||||| ||||  ||||||||||||||||||    
T  10314 atttttcgtcctacc-cccatttt-attctccaaaaattcagagaaatgacagtttta 10259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0432; HSP #2
Raw Score: 84; E-Value: 9e-40
Query Start/End: Original strand, 231 - 413
Target Start/End: Original strand, 9934 - 10114
Alignment:
Q  231 tttaattacacttttggtcctcgtgtattggcctactcacgaaactagtcctacccttttaaaacagaacaaaacggtccttcaattatcatttttgttg 330  Q
    |||||||||| ||||||||||||||| || ||||| ||||||||||  || | ||||||||| | ||||||||| |||||||||||||||| |||||||     
T  9934 tttaattacatttttggtcctcgtgttttagcctattcacgaaactgatcttgcccttttaagatagaacaaaatggtccttcaattatcaattttgtta 10033  T
Q  331 catttttcgtcctacctcctattttcaaactccagaaatgtagagaaatgacagttttaggcggntttagacctacccttatg 413  Q
    || ||||| ||||||||||||||||||||||| ||||| | |||||||||||| |||||||||| |||| || ||||| ||||    
T  10034 ca-ttttcatcctacctcctattttcaaactcaagaaacg-agagaaatgacaattttaggcggttttaaacatacccctatg 10114  T

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Target: scaffold0176 (Bit Score: 83; Significance: 3e-39; HSPs: 2)
Name: scaffold0176
Description:

Target: scaffold0176; HSP #1
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 232 - 326
Target Start/End: Complemental strand, 19163 - 19069
Alignment:
Q  232 ttaattacacttttggtcctcgtgtattggcctactcacgaaactagtcctacccttttaaaacagaacaaaacggtccttcaattatcattttt 326  Q
    ||||||||||||||||||||||||| ||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||    
T  19163 ttaattacacttttggtcctcgtgttttggcctactcacgaaacttgtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttt 19069  T

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Target: scaffold0176; HSP #2
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 235 - 346
Target Start/End: Original strand, 18841 - 18952
Alignment:
Q  235 attacacttttggtcctcgtgtattggcctactcacgaaactagtcctacccttttaaaacagaacaaaacggtccttcaattatcatttttgttgcatt 334  Q
    |||||||||||||||||  ||| ||||||||||||||||||| ||| | ||||||||||||| ||||||||||| |||||||||||||||||||||||||    
T  18841 attacacttttggtccttctgttttggcctactcacgaaactggtcttgcccttttaaaacataacaaaacggtgcttcaattatcatttttgttgcatt 18940  T
Q  335 tttcgtcctacc 346  Q
    |||| |||||||    
T  18941 tttcatcctacc 18952  T

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Target: scaffold0113 (Bit Score: 79; Significance: 9e-37; HSPs: 1)
Name: scaffold0113
Description:

Target: scaffold0113; HSP #1
Raw Score: 79; E-Value: 9e-37
Query Start/End: Original strand, 233 - 343
Target Start/End: Complemental strand, 28784 - 28674
Alignment:
Q  233 taattacacttttggtcctcgtgtattggcctactcacgaaactagtcctacccttttaaaacagaacaaaacggtccttcaattatcatttttgttgca 332  Q
    ||||||||||||||||| |||||| |||||||||| |||||||| ||| | |||||||||||||||||||||||||| ||||||||||||||||||||||    
T  28784 taattacacttttggtcatcgtgttttggcctacttacgaaactggtcatgcccttttaaaacagaacaaaacggtcattcaattatcatttttgttgca 28685  T
Q  333 tttttcgtcct 343  Q
     ||||||||||    
T  28684 gttttcgtcct 28674  T

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Target: scaffold1585 (Bit Score: 75; Significance: 2e-34; HSPs: 1)
Name: scaffold1585
Description:

Target: scaffold1585; HSP #1
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 232 - 354
Target Start/End: Original strand, 570 - 692
Alignment:
Q  232 ttaattacacttttggtcctcgtgtattggcctactcacgaaactagtcctacccttttaaaacagaacaaaacggtccttcaattatcatttttgttgc 331  Q
    ||||||||||||||| ||||||||| ||||||||||||||||| |  || | |||||||||||||||||||||| ||||||||||||||||||||||||     
T  570 ttaattacacttttgatcctcgtgttttggcctactcacgaaaatgatcatgcccttttaaaacagaacaaaactgtccttcaattatcatttttgttgt 669  T
Q  332 atttttcgtcctacctcctattt 354  Q
    ||||||||||  |||||| ||||    
T  670 atttttcgtctcacctcccattt 692  T

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Target: scaffold0076 (Bit Score: 72; Significance: 1e-32; HSPs: 1)
Name: scaffold0076
Description:

Target: scaffold0076; HSP #1
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 229 - 332
Target Start/End: Complemental strand, 8554 - 8451
Alignment:
Q  229 ggtttaattacacttttggtcctcgtgtattggcctactcacgaaactagtcctacccttttaaaacagaacaaaacggtccttcaattatcatttttgt 328  Q
    ||||||||||||||||||||| || ||| |||| ||||| |||||||| ||||||||||||||||||| | |||||||||||||||||||||||||||||    
T  8554 ggtttaattacacttttggtcttcatgttttggtctacttacgaaactggtcctacccttttaaaacacagcaaaacggtccttcaattatcatttttgt 8455  T
Q  329 tgca 332  Q
    ||||    
T  8454 tgca 8451  T

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Target: scaffold0057 (Bit Score: 66; Significance: 5e-29; HSPs: 2)
Name: scaffold0057
Description:

Target: scaffold0057; HSP #1
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 230 - 355
Target Start/End: Complemental strand, 62002 - 61877
Alignment:
Q  230 gtttaattacacttttggtcctcgtgtattggcctactcacgaaactagtcctacccttttaaaacagaacaaaacggtccttcaattatcatttttgtt 329  Q
    ||||||||||||||||| ||||||||| |||| |||||||||||| | ||||||||||||||||| |||||||||   || ||||| |||||||||||||    
T  62002 gtttaattacacttttgatcctcgtgttttggtctactcacgaaaatggtcctacccttttaaaatagaacaaaatcatcattcaaatatcatttttgtt 61903  T
Q  330 gcatttttcgtcctacctcctatttt 355  Q
      ||||||||||||||| || |||||    
T  61902 atatttttcgtcctaccccccatttt 61877  T

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Target: scaffold0057; HSP #2
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 226 - 303
Target Start/End: Original strand, 61025 - 61102
Alignment:
Q  226 ataggtttaattacacttttggtcctcgtgtattggcctactcacgaaactagtcctacccttttaaaacagaacaaa 303  Q
    ||||| |||| |||||||||| ||||||||| ||||||||||||||||| |  |||| || |||||||| ||||||||    
T  61025 ataggcttaagtacacttttgatcctcgtgttttggcctactcacgaaaatgatcctgccattttaaaatagaacaaa 61102  T

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Target: scaffold0168 (Bit Score: 58; Significance: 3e-24; HSPs: 1)
Name: scaffold0168
Description:

Target: scaffold0168; HSP #1
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 278 - 355
Target Start/End: Complemental strand, 7784 - 7707
Alignment:
Q  278 gtcctacccttttaaaacagaacaaaacggtccttcaattatcatttttgttgcatttttcgtcctacctcctatttt 355  Q
    ||||| |||||||||||||||||||||| ||| |||| ||||||||||||||||||||||||||||||| ||||||||    
T  7784 gtccttcccttttaaaacagaacaaaactgtcgttcagttatcatttttgttgcatttttcgtcctaccccctatttt 7707  T

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Target: scaffold1696 (Bit Score: 57; Significance: 1e-23; HSPs: 1)
Name: scaffold1696
Description:

Target: scaffold1696; HSP #1
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 233 - 345
Target Start/End: Original strand, 454 - 565
Alignment:
Q  233 taattacacttttggtcctcgtgtattggcctactcacgaaactagtcctacccttttaaaacagaacaaaacggtccttcaattatcatttttgttgca 332  Q
    |||||||| |||||||| |||||| ||||||||||||||||| | ||| |   ||||||||||| |||| ||  ||||||||||||||||||||||||||    
T  454 taattaca-ttttggtcttcgtgttttggcctactcacgaaaatggtcatgatcttttaaaacaaaacataatcgtccttcaattatcatttttgttgca 552  T
Q  333 tttttcgtcctac 345  Q
    |||||||||||||    
T  553 tttttcgtcctac 565  T

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Target: scaffold0262 (Bit Score: 37; Significance: 0.00000000001; HSPs: 1)
Name: scaffold0262
Description:

Target: scaffold0262; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 176 - 228
Target Start/End: Original strand, 11443 - 11495
Alignment:
Q  176 accactctaaaactaatttttaccttattacaaatcagtcctcatataaaata 228  Q
    |||||||||| ||||| ||||| ||||||||||||||||||||||| ||||||    
T  11443 accactctaagactaaattttatcttattacaaatcagtcctcatacaaaata 11495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0050 (Bit Score: 34; Significance: 0.0000000006; HSPs: 1)
Name: scaffold0050
Description:

Target: scaffold0050; HSP #1
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 175 - 228
Target Start/End: Complemental strand, 5868 - 5815
Alignment:
Q  175 gaccactctaaaactaatttttaccttattacaaatcagtcctcatataaaata 228  Q
    |||||||||||||||||  |||||||||||| |||||||| |||||| ||||||    
T  5868 gaccactctaaaactaaactttaccttattataaatcagttctcatacaaaata 5815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0200 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0200
Description:

Target: scaffold0200; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 167 - 228
Target Start/End: Original strand, 24579 - 24640
Alignment:
Q  167 tgttggtcgaccactctaaaactaatttttaccttattacaaatcagtcctcatataaaata 228  Q
    ||||||| || ||||||| ||||||  |||||||||||||||||||||| || || ||||||    
T  24579 tgttggtggatcactctagaactaaactttaccttattacaaatcagtcatcgtacaaaata 24640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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