View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
Legend |
| Query |
| Query hiting target |
| Query hiting target's complemental strand |
| Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: F9310-LTR4-TNT-insertion-2 (Length: 183)
Name: F9310-LTR4-TNT-insertion-2
Description: F9310-LTR4
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
[»] F9310-LTR4-TNT-insertion-2 |
| |
|
[»] scaffold0031 (1 HSPs) |
| | |
|
[»] scaffold0128 (1 HSPs) |
| | |
|
[»] scaffold0248 (1 HSPs) |
| | |
|
[»] scaffold0051 (4 HSPs) |
| | |
|
[»] scaffold0274 (1 HSPs) |
| | |
|
[»] scaffold0136 (1 HSPs) |
| | |
|
[»] scaffold0053 (1 HSPs) |
| | |
|
Alignment Details
Target: chr6 (Bit Score: 141; Significance: 3e-74; HSPs: 11)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 141; E-Value: 3e-74
Query Start/End: Original strand, 33 - 173
Target Start/End: Original strand, 33212256 - 33212396
Alignment:
Q |
33 |
tgaaggatcaagtgaaagaaatagagaatattggaaggggaaggctttgaggggttaatttgtcttcataatacaacactctgctcatttggggaactaa |
132 |
Q |
|
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
T |
33212256 |
tgaaggatcaagtgaaagaaatagagaatattggaaggggaaggctttgaggggttaatttgtcttcataatacaacactctgctcatttggggaactaa |
33212355 |
T |
|
Q |
133 |
aaagttgtattggatgacggttttgtgggtttatatgaatt |
173 |
Q |
|
|
||||||||||||||||||||||||||||||||||||||||| |
|
|
T |
33212356 |
aaagttgtattggatgacggttttgtgggtttatatgaatt |
33212396 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #2
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 34 - 173
Target Start/End: Original strand, 26713788 - 26713929
Alignment:
Q |
34 |
gaaggatcaagtgaaagaaatagagaatattggaaggggaaggctttgaggggttaatttgtcttcataat-acaacactctgctcatttggggaactaa |
132 |
Q |
|
|
|||||| |||||| ||||||||||| | ||||| |||||| ||||||||||||||||||| ||||||| || | || | || ||||||||||||||| | |
|
|
T |
26713788 |
gaaggagcaagtggaagaaatagagtacattgggaggggagggctttgaggggttaatttttcttcatgataagaaaatcctcctcatttggggaactca |
26713887 |
T |
|
Q |
133 |
aaagttgtattggatgacggtttt-gtgggtttatatgaatt |
173 |
Q |
|
|
||| |||||||||| || |||||| | ||||||||||||||| |
|
|
T |
26713888 |
aaaattgtattggaggagggttttggagggtttatatgaatt |
26713929 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #3
Raw Score: 52; E-Value: 4e-21
Query Start/End: Original strand, 41 - 164
Target Start/End: Complemental strand, 33590476 - 33590353
Alignment:
Q |
41 |
caagtgaaagaaatagagaatattggaaggggaaggctttgaggggttaatttgtcttcataatacaacactctgctcatttggggaactaaaaagttgt |
140 |
Q |
|
|
||||||||| |||||||| | | ||| |||||| | |||| |||||||| || |||||||||||||| || || |||||||||||| ||||||| |||| |
|
|
T |
33590476 |
caagtgaaaaaaatagaggaaaatgggaggggaggattttggggggttaacttttcttcataatacaaaaccctcctcatttggggagctaaaaaattgt |
33590377 |
T |
|
Q |
141 |
attggatgacggttttgtgggttt |
164 |
Q |
|
|
||||||||| ||||||| |||||| |
|
|
T |
33590376 |
attggatgagggttttgggggttt |
33590353 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #4
Raw Score: 47; E-Value: 4e-18
Query Start/End: Original strand, 41 - 173
Target Start/End: Complemental strand, 20820679 - 20820545
Alignment:
Q |
41 |
caagtgaaagaaatagagaatattggaaggggaaggctttgaggggttaatttgtcttcataatacaacactctgctcattt-ggggaactaaaaagttg |
139 |
Q |
|
|
|||||| |||||||| |||| | ||| |||||| ||||||| |||||||| || |||||||||||| | ||||| ||| ||| ||||||||||||| ||| |
|
|
T |
20820679 |
caagtggaagaaataaagaaaaatgggaggggagggctttggggggttaacttttcttcataatactaaactctcctcgtttgggggaactaaaaaattg |
20820580 |
T |
|
Q |
140 |
tattggatgacggtttt-gtgggtttatatgaatt |
173 |
Q |
|
|
|||||||||| ||||| | || |||||||||||| |
|
|
T |
20820579 |
tattggatgagagttttagaggatttatatgaatt |
20820545 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #5
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 76 - 149
Target Start/End: Original strand, 1567248 - 1567322
Alignment:
Q |
76 |
gctttgaggggttaatttgtcttcataatacaacactctgctcatttgg-ggaactaaaaagttgtattggatga |
149 |
Q |
|
|
|||||| |||||||| || |||||||||||||| || || ||||||||| ||||||||||| ||||||||||||| |
|
|
T |
1567248 |
gctttggggggttaacttttcttcataatacaaaaccctcctcatttggaggaactaaaaaattgtattggatga |
1567322 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #6
Raw Score: 37; E-Value: 0.000000000004
Query Start/End: Original strand, 41 - 144
Target Start/End: Complemental strand, 28552034 - 28551930
Alignment:
Q |
41 |
caagtgaaagaaatagagaatattggaaggggaaggctttgaggggttaatttgtcttcataatacaacactctgctcatttgg-ggaactaaaaagttg |
139 |
Q |
|
|
|||||| |||||||||| | | ||| |||||| ||||||||||||||| || |||||||||||||| ||||| ||||||||| | ||||| ||| ||| |
|
|
T |
28552034 |
caagtggaagaaatagaagaaaatgggaggggatggctttgaggggttagcttttcttcataatacaaaactctcctcatttggagaaactataaatttg |
28551935 |
T |
|
Q |
140 |
tattg |
144 |
Q |
|
|
||||| |
|
|
T |
28551934 |
tattg |
28551930 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #7
Raw Score: 37; E-Value: 0.000000000004
Query Start/End: Original strand, 42 - 157
Target Start/End: Complemental strand, 32719523 - 32719408
Alignment:
Q |
42 |
aagtgaaagaaatagagaatattggaaggggaaggctttgaggggttaatttgtcttcataatacaacactctgctcatttgg-ggaactaaaaagttgt |
140 |
Q |
|
|
||||| ||||||||||| | | ||| | ||| ||||||| |||||||| || |||||||||||||| || || ||||||||| ||||||||||| |||| |
|
|
T |
32719523 |
aagtggaagaaatagaggaaaatgggaaaggagggctttg-ggggttaacttttcttcataatacaaaaccctcctcatttggaggaactaaaaaattgt |
32719425 |
T |
|
Q |
141 |
attggatgacggttttg |
157 |
Q |
|
|
|||||| || ||||||| |
|
|
T |
32719424 |
attggaggagggttttg |
32719408 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #8
Raw Score: 35; E-Value: 0.00000000006
Query Start/End: Original strand, 41 - 146
Target Start/End: Original strand, 32221935 - 32222041
Alignment:
Q |
41 |
caagtgaaagaaatagagaatattggaaggggaaggctttgaggggttaatttgtcttcataatacaacactctgctcatttgg-ggaactaaaaagttg |
139 |
Q |
|
|
|||||| |||||||| |||| | | |||| ||| || ||||||||||||| || |||| |||||| | ||||| ||||||||| ||||||||||| ||| |
|
|
T |
32221935 |
caagtggaagaaataaagaaaaatagaagaggagggttttgaggggttaacttttctttataatatcaaactctcctcatttggaggaactaaaaaattg |
32222034 |
T |
|
Q |
140 |
tattgga |
146 |
Q |
|
|
||||||| |
|
|
T |
32222035 |
tattgga |
32222041 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #9
Raw Score: 34; E-Value: 0.0000000002
Query Start/End: Original strand, 95 - 156
Target Start/End: Complemental strand, 22788612 - 22788551
Alignment:
Q |
95 |
tcttcataatacaacactctgctcatttggggaactaaaaagttgtattggatgacggtttt |
156 |
Q |
|
|
|||| ||||||||| ||||| |||||||| ||||||||||| |||||||||| || |||||| |
|
|
T |
22788612 |
tcttgataatacaaaactcttctcatttgaggaactaaaaaattgtattggaggagggtttt |
22788551 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #10
Raw Score: 28; E-Value: 0.0000009
Query Start/End: Original strand, 116 - 155
Target Start/End: Original strand, 4464953 - 4464992
Alignment:
Q |
116 |
ctcatttggggaactaaaaagttgtattggatgacggttt |
155 |
Q |
|
|
|||||||||||||||||||| |||||||||| || ||||| |
|
|
T |
4464953 |
ctcatttggggaactaaaaaattgtattggaggagggttt |
4464992 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #11
Raw Score: 28; E-Value: 0.0000009
Query Start/End: Original strand, 83 - 157
Target Start/End: Original strand, 12779488 - 12779563
Alignment:
Q |
83 |
ggggttaatttgtcttcataatacaacactctgctcatttgggg-aactaaaaagttgtattggatgacggttttg |
157 |
Q |
|
|
|||||||| || ||||| || ||||| || || || |||||||| |||||||||||||||||||| || ||||||| |
|
|
T |
12779488 |
ggggttaacttttcttcgtactacaaaacccttcttatttgggggaactaaaaagttgtattggaggagggttttg |
12779563 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4 (Bit Score: 62; Significance: 5e-27; HSPs: 24)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 62; E-Value: 5e-27
Query Start/End: Original strand, 34 - 173
Target Start/End: Complemental strand, 46177083 - 46176942
Alignment:
Q |
34 |
gaaggatcaagtgaaagaaatagagaatattggaaggggaaggctttgaggggttaatttgtcttcataatacaacactctgctcatttgg-ggaactaa |
132 |
Q |
|
|
|||||| |||||| ||||||||||| | ||||| |||||| || |||| ||||||||||| |||| ||||||||| || || ||||||||| |||||||| |
|
|
T |
46177083 |
gaaggaacaagtggaagaaatagagtacattgggaggggagggttttggggggttaatttttcttaataatacaaaaccctcctcatttggaggaactaa |
46176984 |
T |
|
Q |
133 |
aaagttgtattggatgacggtttt-gtgggtttatatgaatt |
173 |
Q |
|
|
|||||||||||||| || |||||| | ||||||||||||||| |
|
|
T |
46176983 |
aaagttgtattggaggagggttttggggggtttatatgaatt |
46176942 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #2
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 34 - 146
Target Start/End: Original strand, 35959121 - 35959234
Alignment:
Q |
34 |
gaaggatcaagtgaaagaaatagagaatattggaaggggaaggctttgaggggttaatttgtcttcataatacaacactctgctcattt-ggggaactaa |
132 |
Q |
|
|
|||||| |||||| ||||||||||| | |||| |||||| ||||||| ||| ||||||| |||||||||||||| || || ||||||| |||||||||| |
|
|
T |
35959121 |
gaaggagcaagtggaagaaatagagtacattgtgaggggagggctttgggggtttaatttttcttcataatacaaaaccctcctcatttgggggaactaa |
35959220 |
T |
|
Q |
133 |
aaagttgtattgga |
146 |
Q |
|
|
|||||||||||||| |
|
|
T |
35959221 |
aaagttgtattgga |
35959234 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #3
Raw Score: 45; E-Value: 7e-17
Query Start/End: Original strand, 42 - 157
Target Start/End: Complemental strand, 12708982 - 12708866
Alignment:
Q |
42 |
aagtgaaagaaatagagaatattggaaggggaaggctttgaggggttaatttgtcttcataatacaacactctgctcatttgg-ggaactaaaaagttgt |
140 |
Q |
|
|
||||| ||||||||||| | | ||| || ||| ||||||| |||||||| || |||||||||||||| || || ||||||||| ||||||||||| |||| |
|
|
T |
12708982 |
aagtggaagaaatagaggaaaatgggagaggagggctttggggggttaacttttcttcataatacaaaaccctcctcatttggaggaactaaaaaattgt |
12708883 |
T |
|
Q |
141 |
attggatgacggttttg |
157 |
Q |
|
|
|||||| || ||||||| |
|
|
T |
12708882 |
attggaggagggttttg |
12708866 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #4
Raw Score: 45; E-Value: 7e-17
Query Start/End: Original strand, 42 - 157
Target Start/End: Complemental strand, 29114381 - 29114265
Alignment:
Q |
42 |
aagtgaaagaaatagagaatattggaaggggaaggctttgaggggttaatttgtcttcataatacaacactctgctcatttgg-ggaactaaaaagttgt |
140 |
Q |
|
|
||||| ||||||||||| | | ||| || ||| ||||||| |||||||| || |||||||||||||| || || ||||||||| ||||||||||| |||| |
|
|
T |
29114381 |
aagtggaagaaatagaggaaaatgggagaggagggctttggggggttaacttttcttcataatacaaaaccctcctcatttggaggaactaaaaaattgt |
29114282 |
T |
|
Q |
141 |
attggatgacggttttg |
157 |
Q |
|
|
|||||| || ||||||| |
|
|
T |
29114281 |
attggaggagggttttg |
29114265 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #5
Raw Score: 45; E-Value: 7e-17
Query Start/End: Original strand, 42 - 157
Target Start/End: Complemental strand, 38136982 - 38136866
Alignment:
Q |
42 |
aagtgaaagaaatagagaatattggaaggggaaggctttgaggggttaatttgtcttcataatacaacactctgctcatttgg-ggaactaaaaagttgt |
140 |
Q |
|
|
||||| ||||||||||| | | |||||| ||| ||||||| |||||||| || | |||||||||||| || || ||||||||| ||||||||||| |||| |
|
|
T |
38136982 |
aagtggaagaaatagaggaaaatggaagaggagggctttggggggttaactttttttcataatacaaaacccttctcatttggaggaactaaaaaattgt |
38136883 |
T |
|
Q |
141 |
attggatgacggttttg |
157 |
Q |
|
|
|||||| || ||||||| |
|
|
T |
38136882 |
attggaggagggttttg |
38136866 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #6
Raw Score: 42; E-Value: 0.000000000000004
Query Start/End: Original strand, 41 - 134
Target Start/End: Original strand, 52636693 - 52636786
Alignment:
Q |
41 |
caagtgaaagaaatagagaatattggaaggggaaggctttgaggggttaatttgtcttcataatacaacactctgctcatttggggaactaaaa |
134 |
Q |
|
|
|||||| ||||||||||| | |||||||| || ||||||| ||||||||||| ||||||||||| || || || ||||||||| ||||||||| |
|
|
T |
52636693 |
caagtggaagaaatagagtacattggaagatgagggctttggggggttaatttttcttcataatataaaaccctcctcatttggagaactaaaa |
52636786 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #7
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 42 - 157
Target Start/End: Complemental strand, 30198919 - 30198803
Alignment:
Q |
42 |
aagtgaaagaaatagagaatattggaaggggaaggctttgaggggttaatttgtcttcataatacaacactctgctcatttgg-ggaactaaaaagttgt |
140 |
Q |
|
|
||||| ||||||||||| | | | | || ||| ||||||| |||||||| || |||||||||||||| || || ||||||||| ||||||||||| |||| |
|
|
T |
30198919 |
aagtggaagaaatagaggaaaataggagaggagggctttggggggttaacttttcttcataatacaaaaccctcctcatttggaggaactaaaaaattgt |
30198820 |
T |
|
Q |
141 |
attggatgacggttttg |
157 |
Q |
|
|
|||||| || ||||||| |
|
|
T |
30198819 |
attggaggagggttttg |
30198803 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #8
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 35 - 143
Target Start/End: Original strand, 44076530 - 44076638
Alignment:
Q |
35 |
aaggatcaagtgaaagaaatagagaatattggaaggggaaggctttgaggggttaatttgtcttcataatacaacactctgctcatttggggaactaaaa |
134 |
Q |
|
|
||||| ||||||||| |||||||||| |||| | | | ||||||| ||| ||||||| |||||||||||||| ||||| |||| || ||||||||||| |
|
|
T |
44076530 |
aaggaacaagtgaaaaaaatagagaacattgagatgaaagggctttgggggattaatttttcttcataatacaaaactcttctcacttagggaactaaaa |
44076629 |
T |
|
Q |
135 |
agttgtatt |
143 |
Q |
|
|
| ||||||| |
|
|
T |
44076630 |
aattgtatt |
44076638 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #9
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 41 - 149
Target Start/End: Original strand, 11976771 - 11976878
Alignment:
Q |
41 |
caagtgaaagaaatagagaatattggaaggggaaggctttgaggggttaatttgtcttcataatacaacactctgctcatttg-gggaactaaaaagttg |
139 |
Q |
|
|
|||||||||||||||||| | |||| |||||| || | |||| |||||||| |||||||||||||| || | ||||||| |||||||||||||||| |
|
|
T |
11976771 |
caagtgaaagaaatagaggacattgaaagggg--ggttatgagatgttaatttttcttcataatacaaaacatttctcatttaagggaactaaaaagttg |
11976868 |
T |
|
Q |
140 |
tattggatga |
149 |
Q |
|
|
|||||||||| |
|
|
T |
11976869 |
tattggatga |
11976878 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #10
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 86 - 143
Target Start/End: Complemental strand, 8827923 - 8827866
Alignment:
Q |
86 |
gttaatttgtcttcataatacaacactctgctcatttggggaactaaaaagttgtatt |
143 |
Q |
|
|
||||||| |||||||||||||| ||||| |||||||||| ||||||||||||||||| |
|
|
T |
8827923 |
gttaattattcttcataatacaaaactctcctcatttgggaaactaaaaagttgtatt |
8827866 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #11
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 62 - 157
Target Start/End: Original strand, 45899349 - 45899443
Alignment:
Q |
62 |
attggaaggggaaggctttgaggggttaatttgtcttcataatacaacactctgctcatttggggaactaaaaagttgtattggatgacggttttg |
157 |
Q |
|
|
||||| |||||| |||||||||||| | | || |||||||||||||| | || || ||||||||||||||||| |||||||||| || ||||||| |
|
|
T |
45899349 |
attgggaggggagggctttgaggggcttagttttcttcataatacaaaa-tcccctaatttggggaactaaaaaattgtattggaggagggttttg |
45899443 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #12
Raw Score: 35; E-Value: 0.00000000006
Query Start/End: Original strand, 41 - 146
Target Start/End: Original strand, 16318549 - 16318655
Alignment:
Q |
41 |
caagtgaaagaaatagagaatattggaaggggaaggctttgaggggttaatttgtcttcataatacaacactctgctcatttgg-ggaactaaaaagttg |
139 |
Q |
|
|
|||||| |||||||||| | | ||| || ||| |||||| ||||||||| || |||||||| ||||| || || ||||||||| ||||||||||| ||| |
|
|
T |
16318549 |
caagtggaagaaatagaagaaaatgggagaggagggctttcaggggttaacttttcttcatattacaaaaccctcctcatttggaggaactaaaaaattg |
16318648 |
T |
|
Q |
140 |
tattgga |
146 |
Q |
|
|
||||||| |
|
|
T |
16318649 |
tattgga |
16318655 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #13
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 34 - 149
Target Start/End: Original strand, 21081275 - 21081391
Alignment:
Q |
34 |
gaaggatcaagtgaaagaaatagagaatattggaaggggaaggctttgaggggttaatttgtcttcataatacaacactctgctcatttgggg-aactaa |
132 |
Q |
|
|
|||||| |||||| |||||||||| | |||| ||||||| | |||| ||||| |||| ||||||||| |||| || || ||||||||||| |||| | |
|
|
T |
21081275 |
gaaggagcaagtggaagaaatagatgacattgagaggggaatgttttggagggttcatttttcttcataaaacaaaaccctcctcatttggggtaactta |
21081374 |
T |
|
Q |
133 |
aaagttgtattggatga |
149 |
Q |
|
|
||| ||||||||||||| |
|
|
T |
21081375 |
aaaattgtattggatga |
21081391 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #14
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 42 - 157
Target Start/End: Complemental strand, 28175612 - 28175496
Alignment:
Q |
42 |
aagtgaaagaaatagagaatattggaaggggaaggctttgaggggttaatttgtcttcataatacaacactctgctcatttgg-ggaactaaaaagttgt |
140 |
Q |
|
|
||||| ||||||||||| | | ||| || ||| ||||||| | |||||| || |||||||||||||| | || ||||||||| ||||||||||| |||| |
|
|
T |
28175612 |
aagtggaagaaatagaggaaaatgggagaggagggctttgggaggttaacttttcttcataatacaaaatcctcctcatttggaggaactaaaaaattgt |
28175513 |
T |
|
Q |
141 |
attggatgacggttttg |
157 |
Q |
|
|
|| ||| || ||||||| |
|
|
T |
28175512 |
ataggaggagggttttg |
28175496 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #15
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 84 - 173
Target Start/End: Original strand, 45823530 - 45823621
Alignment:
Q |
84 |
gggttaatttgtcttcataatacaacactctgctcatttgggg-aactaaaaagttgtattggatgacggtttt-gtgggtttatatgaatt |
173 |
Q |
|
|
||||||| || |||||||||||||| ||||| ||||||||||| |||| |||| |||||||| | || |||||| | | ||||||||||||| |
|
|
T |
45823530 |
gggttaacttttcttcataatacaaaactctcctcatttggggaaacttaaaaattgtattgaaggagggttttggagagtttatatgaatt |
45823621 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #16
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 95 - 173
Target Start/End: Complemental strand, 8828292 - 8828215
Alignment:
Q |
95 |
tcttcataatacaacactctgctcatttggggaactaaaaagttgtattggatgacggttttgtgggtttatatgaatt |
173 |
Q |
|
|
|||||||||||||| ||||| |||||||| |||||| |||| || || |||| || || |||| ||||||||||||||| |
|
|
T |
8828292 |
tcttcataatacaaaactctcctcatttgaggaactgaaaaattataatggagga-ggatttgggggtttatatgaatt |
8828215 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #17
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 34 - 147
Target Start/End: Complemental strand, 22891443 - 22891329
Alignment:
Q |
34 |
gaaggatcaagtgaaagaaatagagaatattggaaggggaaggctttgaggggttaatttgtcttcataatacaacactctgctcatttgg-ggaactaa |
132 |
Q |
|
|
|||||| ||||| ||||||||||| |||||| |||||| | |||| ||||||||||| ||| | |||||||| | || |||||||| | |||||| |
|
|
T |
22891443 |
gaaggaacaagtagaagaaatagagtatattgagaggggagagttttggggggttaatttttctccgtaatacaaaaaccttatcatttggagaaactaa |
22891344 |
T |
|
Q |
133 |
aaagttgtattggat |
147 |
Q |
|
|
||||||||||||||| |
|
|
T |
22891343 |
aaagttgtattggat |
22891329 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #18
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 34 - 147
Target Start/End: Complemental strand, 22943107 - 22942993
Alignment:
Q |
34 |
gaaggatcaagtgaaagaaatagagaatattggaaggggaaggctttgaggggttaatttgtcttcataatacaacactctgctcatttgg-ggaactaa |
132 |
Q |
|
|
|||||| ||||| ||||||||||| |||||| |||||| | |||| ||||||||||| ||| | |||||||| | || |||||||| | |||||| |
|
|
T |
22943107 |
gaaggaacaagtagaagaaatagagtatattgagaggggagagttttggggggttaatttttctccgtaatacaaaaaccttatcatttggagaaactaa |
22943008 |
T |
|
Q |
133 |
aaagttgtattggat |
147 |
Q |
|
|
||||||||||||||| |
|
|
T |
22943007 |
aaagttgtattggat |
22942993 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 41 - 173
Target Start/End: Complemental strand, 49668252 - 49668119
Alignment:
Q |
41 |
caagtgaaagaaatagagaatattggaaggggaaggctttgaggggttaatttgtcttcataatacaacactctgctcatttg-gggaactaaaaagttg |
139 |
Q |
|
|
|||||| ||||||||||||| | ||| |||| | ||||||| | |||||| || ||||||||||| | || || ||||||| |||||||||||| ||| |
|
|
T |
49668252 |
caagtggaagaaatagagaaaaatgggagggtacggctttg-gaggttaacttttcttcataatattaaaccctcctcatttaagggaactaaaaaattg |
49668154 |
T |
|
Q |
140 |
tattggatgacggtttt-gtgggtttatatgaatt |
173 |
Q |
|
|
||||||| || |||||| | ||||||| ||||||| |
|
|
T |
49668153 |
tattggaggagggttttggggggtttacatgaatt |
49668119 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #20
Raw Score: 30; E-Value: 0.00000006
Query Start/End: Original strand, 116 - 157
Target Start/End: Complemental strand, 15498867 - 15498826
Alignment:
Q |
116 |
ctcatttggggaactaaaaagttgtattggatgacggttttg |
157 |
Q |
|
|
||||||||||||||| |||| ||||||||||||| ||||||| |
|
|
T |
15498867 |
ctcatttggggaactcaaaaattgtattggatgagggttttg |
15498826 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #21
Raw Score: 30; E-Value: 0.00000006
Query Start/End: Original strand, 83 - 128
Target Start/End: Original strand, 25843818 - 25843863
Alignment:
Q |
83 |
ggggttaatttgtcttcataatacaacactctgctcatttggggaa |
128 |
Q |
|
|
||||||||||| || ||||||||||| ||||| ||||||||||||| |
|
|
T |
25843818 |
ggggttaatttttcatcataatacaaaactcttctcatttggggaa |
25843863 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #22
Raw Score: 30; E-Value: 0.00000006
Query Start/End: Original strand, 41 - 145
Target Start/End: Original strand, 33500452 - 33500557
Alignment:
Q |
41 |
caagtgaaagaaatagagaatattggaaggggaaggctttgaggggttaatttgtcttcataatacaacactctgctcatttgg-ggaactaaaaagttg |
139 |
Q |
|
|
|||||| ||||||||||| | | ||| || ||| |||||||||| ||||| || |||||||| |||| || || ||||||||| ||||||||||| || |
|
|
T |
33500452 |
caagtggaagaaatagaggaaaatgggagaggagggctttgaggagttaactttccttcataagacaaaaccctcctcatttggaggaactaaaaaaatg |
33500551 |
T |
|
Q |
140 |
tattgg |
145 |
Q |
|
|
|||||| |
|
|
T |
33500552 |
tattgg |
33500557 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #23
Raw Score: 28; E-Value: 0.0000009
Query Start/End: Original strand, 83 - 126
Target Start/End: Original strand, 368043 - 368086
Alignment:
Q |
83 |
ggggttaatttgtcttcataatacaacactctgctcatttgggg |
126 |
Q |
|
|
||||||||||| |||||||||||||| || || ||||||||||| |
|
|
T |
368043 |
ggggttaatttttcttcataatacaaaaccctcctcatttgggg |
368086 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #24
Raw Score: 28; E-Value: 0.0000009
Query Start/End: Original strand, 75 - 157
Target Start/End: Original strand, 42650602 - 42650685
Alignment:
Q |
75 |
ggctttgaggggttaatttgtcttcataatacaacactctgctcatttgggg-aactaaaaagttgtattggatgacggttttg |
157 |
Q |
|
|
||||||| ||| || |||| |||||| |||| || || || ||||||||||| ||||||||| |||||||||| || ||||||| |
|
|
T |
42650602 |
ggctttgggggttttatttttcttcaaaatataaaaccctcctcatttgggggaactaaaaaattgtattggaggagggttttg |
42650685 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7 (Bit Score: 54; Significance: 3e-22; HSPs: 25)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 35 - 164
Target Start/End: Complemental strand, 32820384 - 32820256
Alignment:
Q |
35 |
aaggatcaagtgaaagaaatagagaatattggaaggggaaggctttgaggggttaatttgtcttcataatacaacactctgctcatttggggaactaaaa |
134 |
Q |
|
|
||||| |||||| |||||||| || | |||||||||||| || ||| |||||||||||| ||||| |||||||| | | | ||| ||||||||||||||| |
|
|
T |
32820384 |
aaggagcaagtggaagaaatatagtacattggaaggggagggtttt-aggggttaatttttcttcctaatacaaaattatcctcgtttggggaactaaaa |
32820286 |
T |
|
Q |
135 |
agttgtattggatgacggttttgtgggttt |
164 |
Q |
|
|
|||||||||||| | |||||||||||||| |
|
|
T |
32820285 |
agttgtattggagaagggttttgtgggttt |
32820256 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #2
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 34 - 146
Target Start/End: Complemental strand, 42113113 - 42113002
Alignment:
Q |
34 |
gaaggatcaagtgaaagaaatagagaatattggaaggggaaggctttgaggggttaatttgtcttcataatacaacactctgctcatttggggaactaaa |
133 |
Q |
|
|
|||||| |||||| ||||||||||| ||||| || ||| || |||| ||||||||||| |||||||||||| | ||||| |||||||||||||||||| |
|
|
T |
42113113 |
gaaggagcaagtggaagaaatagagtccattgggagagga-ggttttggggggttaatttttcttcataatactaaactctcctcatttggggaactaaa |
42113015 |
T |
|
Q |
134 |
aagttgtattgga |
146 |
Q |
|
|
||||||||||||| |
|
|
T |
42113014 |
aagttgtattgga |
42113002 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #3
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 41 - 173
Target Start/End: Complemental strand, 38505483 - 38505349
Alignment:
Q |
41 |
caagtgaaagaaatagagaatattggaaggggaaggctttgaggggttaatttgtcttcataatacaacactctgctcattt-ggggaactaaaaagttg |
139 |
Q |
|
|
|||||| ||||||||||| | | ||| |||||| ||||||| |||||||| || |||||||||||||| || || ||||||| ||||||||| ||| ||| |
|
|
T |
38505483 |
caagtggaagaaatagaggaaaatgggaggggagggctttggggggttaacttttcttcataatacaaaaccctcctcatttgggggaactataaaattg |
38505384 |
T |
|
Q |
140 |
tattggatgacggtttt-gtgggtttatatgaatt |
173 |
Q |
|
|
||||||| || |||||| | ||||||||||||||| |
|
|
T |
38505383 |
tattggaggagggttttggagggtttatatgaatt |
38505349 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #4
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 42 - 157
Target Start/End: Complemental strand, 4058287 - 4058171
Alignment:
Q |
42 |
aagtgaaagaaatagagaatattggaaggggaaggctttgaggggttaatttgtcttcataatacaacactctgctcatttgg-ggaactaaaaagttgt |
140 |
Q |
|
|
||||| ||||||||||| | | |||||| || ||||||| |||||||| || |||||||||||||| || || ||| ||||| | ||||||||| |||| |
|
|
T |
4058287 |
aagtggaagaaatagaggaaaatggaagatgagggctttggggggttaacttttcttcataatacaaaaccctcctcgtttggagcaactaaaaaattgt |
4058188 |
T |
|
Q |
141 |
attggatgacggttttg |
157 |
Q |
|
|
||||||||| ||||||| |
|
|
T |
4058187 |
attggatgagggttttg |
4058171 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #5
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 89 - 154
Target Start/End: Original strand, 13697262 - 13697328
Alignment:
Q |
89 |
aatttgtcttcataatacaacactctgctcatttgggg-aactaaaaagttgtattggatgacggtt |
154 |
Q |
|
|
||||| |||||||||||||| || || ||||||||||| |||||||||||||||||||| ||||||| |
|
|
T |
13697262 |
aatttttcttcataatacaaaaccctcctcatttgggggaactaaaaagttgtattggaagacggtt |
13697328 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #6
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 76 - 149
Target Start/End: Complemental strand, 15749063 - 15748989
Alignment:
Q |
76 |
gctttgaggggttaatttgtcttcataatacaacactctgctcatttgg-ggaactaaaaagttgtattggatga |
149 |
Q |
|
|
|||||| |||||||| || |||||||||||||| || || ||||||||| ||||||||||| ||||||||||||| |
|
|
T |
15749063 |
gctttggggggttaacttttcttcataatacaaaaccctcctcatttggaggaactaaaaaattgtattggatga |
15748989 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #7
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 68 - 146
Target Start/End: Complemental strand, 6746691 - 6746612
Alignment:
Q |
68 |
aggggaaggctttgaggggttaatttgtcttcataatacaacactctgctcattt-ggggaactaaaaagttgtattgga |
146 |
Q |
|
|
|||||| ||||||| ||||||||||| |||| ||||||||| ||| | ||||||| |||||||| |||| |||||||||| |
|
|
T |
6746691 |
aggggagggctttggggggttaatttttctttataatacaaaactttcctcatttgggggaactcaaaaattgtattgga |
6746612 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #8
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 35 - 146
Target Start/End: Original strand, 23551585 - 23551695
Alignment:
Q |
35 |
aaggatcaagtgaaagaaatagagaatattggaaggggaaggctttgaggggttaatttgtcttcataatacaacactctgctcatttggggaactaaaa |
134 |
Q |
|
|
||||| |||||| |||||||| || | ||||| |||||| || ||| |||| ||| ||| |||||||||||||| | || ||||||| ||||||||||| |
|
|
T |
23551585 |
aaggaacaagtggaagaaataaaggacattgggaggggagggatttaaggg-ttagtttttcttcataatacaaagccctcctcattttgggaactaaaa |
23551683 |
T |
|
Q |
135 |
agttgtattgga |
146 |
Q |
|
|
||||||||||| |
|
|
T |
23551684 |
ggttgtattgga |
23551695 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #9
Raw Score: 34; E-Value: 0.0000000002
Query Start/End: Original strand, 68 - 173
Target Start/End: Complemental strand, 33872232 - 33872125
Alignment:
Q |
68 |
aggggaaggctttgaggggttaatttgtcttcataatacaacactctgctcattt-ggggaactaaaaagttgtattggatgacggtttt--gtgggttt |
164 |
Q |
|
|
|||||| ||||||| |||||||| || |||||||||||| | || || ||||||| |||||||||| || |||||||||| || |||||| | |||||| |
|
|
T |
33872232 |
aggggagggctttg-ggggttaacttttcttcataatactaaaccctcctcatttgggggaactaacaaattgtattggaggagggtttttggagggttt |
33872134 |
T |
|
Q |
165 |
atatgaatt |
173 |
Q |
|
|
||||||||| |
|
|
T |
33872133 |
atatgaatt |
33872125 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #10
Raw Score: 34; E-Value: 0.0000000002
Query Start/End: Original strand, 51 - 144
Target Start/End: Complemental strand, 38233874 - 38233781
Alignment:
Q |
51 |
aaatagagaatattggaaggggaaggctttgaggggttaatttgtcttcataatacaacactctgctcatttggggaactaaaaagttgtattg |
144 |
Q |
|
|
|||||||| | ||||||| | || ||||||| ||||||||| |||| ||| ||||| || || |||||||| |||||||||||||||||||| |
|
|
T |
38233874 |
aaatagagtacattggaatgagagggctttggaaggttaatttttcttgatattacaaaacccttctcatttgaggaactaaaaagttgtattg |
38233781 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #11
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 41 - 143
Target Start/End: Original strand, 43741639 - 43741740
Alignment:
Q |
41 |
caagtgaaagaaatagagaatattggaaggggaaggctttgaggggttaatttgtcttcataatacaacactctgctcatttggg-gaactaaaaagttg |
139 |
Q |
|
|
|||||||||||||||||| | | ||| |||||| || |||| || |||| || |||||||||||||| ||||| |||||||||| ||||| |||| ||| |
|
|
T |
43741639 |
caagtgaaagaaatagaggaaaatgggaggggagggttttgtgg--ttaacttttcttcataatacaaaactctcctcatttgggagaactcaaaaattg |
43741736 |
T |
|
Q |
140 |
tatt |
143 |
Q |
|
|
|||| |
|
|
T |
43741737 |
tatt |
43741740 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #12
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 83 - 146
Target Start/End: Complemental strand, 45940507 - 45940443
Alignment:
Q |
83 |
ggggttaatttgtcttcataatacaacactctgctcatttgg-ggaactaaaaagttgtattgga |
146 |
Q |
|
|
|||||||| || |||||||||||||| || || ||||||||| ||||||||||| |||||||||| |
|
|
T |
45940507 |
ggggttaacttttcttcataatacaaaaccctcctcatttggaggaactaaaaaattgtattgga |
45940443 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #13
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 42 - 149
Target Start/End: Complemental strand, 39856511 - 39856405
Alignment:
Q |
42 |
aagtgaaagaaatagagaatattggaaggggaaggctttgaggggttaatttgtcttcataatacaacactctgctcatttggggaactaaaaagttgta |
141 |
Q |
|
|
||||| ||||||||||| ||||||||||| || | |||| | ||||||||| | || ||||||||| | | ||||||| || ||||||||||||||| |
|
|
T |
39856511 |
aagtggaagaaatagagtatattggaaggaaaaagttttgggaggttaattttt-ttaataatacaaaatcatcctcatttcggaaactaaaaagttgta |
39856413 |
T |
|
Q |
142 |
ttggatga |
149 |
Q |
|
|
|||||||| |
|
|
T |
39856412 |
ttggatga |
39856405 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #14
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 86 - 157
Target Start/End: Complemental strand, 42267110 - 42267039
Alignment:
Q |
86 |
gttaatttgtcttcataatacaacactctgctcatttggggaactaaaaagttgtattggatgacggttttg |
157 |
Q |
|
|
|||||||| |||||||||||||| ||||| |||||||| ||| | |||| |||||||||| || ||||||| |
|
|
T |
42267110 |
gttaatttttcttcataatacaaaactcttatcatttggagaattcaaaaattgtattggaggaaggttttg |
42267039 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #15
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 83 - 164
Target Start/End: Complemental strand, 17884298 - 17884219
Alignment:
Q |
83 |
ggggttaatttgtcttcataatacaacactctgctcatttggggaactaaaaagttgtattggatgacggttttgtgggttt |
164 |
Q |
|
|
||||||||||| |||||||||||||| ||| || ||||| ||||||||||| |||||||||| || || ||||| ||||| |
|
|
T |
17884298 |
ggggttaatttttcttcataatacaaaactt--cttatttgaggaactaaaaaattgtattggaggagggctttgttggttt |
17884219 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #16
Raw Score: 30; E-Value: 0.00000006
Query Start/End: Original strand, 85 - 146
Target Start/End: Original strand, 19791667 - 19791728
Alignment:
Q |
85 |
ggttaatttgtcttcataatacaacactctgctcatttggggaactaaaaagttgtattgga |
146 |
Q |
|
|
|||||| || |||||||||||| | || | |||||||||||||||||||| |||||||||| |
|
|
T |
19791667 |
ggttaacttttcttcataatactaaacccacctcatttggggaactaaaaaattgtattgga |
19791728 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #17
Raw Score: 30; E-Value: 0.00000006
Query Start/End: Original strand, 116 - 157
Target Start/End: Original strand, 31055382 - 31055423
Alignment:
Q |
116 |
ctcatttggggaactaaaaagttgtattggatgacggttttg |
157 |
Q |
|
|
|||||||||||||||||||| |||||||||| || ||||||| |
|
|
T |
31055382 |
ctcatttggggaactaaaaaattgtattggaggagggttttg |
31055423 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #18
Raw Score: 30; E-Value: 0.00000006
Query Start/End: Original strand, 49 - 146
Target Start/End: Original strand, 46442649 - 46442746
Alignment:
Q |
49 |
agaaatagagaatattggaaggggaaggctttgaggggttaatttgtcttcataatacaacactctgctcatttggggaactaaaaagttgtattgga |
146 |
Q |
|
|
|||||||||| | | ||| |||||| ||||| | |||||||| || |||||||||||||| | || ||||||||||| ||||||| |||| ||||| |
|
|
T |
46442649 |
agaaatagaggaaaatgggaggggagggcttcggggggttaacttttcttcataatacaaaatcctcatcatttggggagctaaaaaattgttttgga |
46442746 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #19
Raw Score: 29; E-Value: 0.0000002
Query Start/End: Original strand, 42 - 157
Target Start/End: Complemental strand, 16805715 - 16805599
Alignment:
Q |
42 |
aagtgaaagaaatagagaatattggaaggggaaggctttgaggggttaatttgtcttcataatacaacactctgctcatttgg-ggaactaaaaagttgt |
140 |
Q |
|
|
||||| |||||| |||| | | ||| || ||| ||||||| ||| |||| || |||||||||||||| || | |||||||| ||||||||||| |||| |
|
|
T |
16805715 |
aagtggaagaaagagaggaaaatgggagaggagggctttgggggtttaacttttcttcataatacaaaaccttcttcatttggaggaactaaaaaattgt |
16805616 |
T |
|
Q |
141 |
attggatgacggttttg |
157 |
Q |
|
|
|||||| || ||||||| |
|
|
T |
16805615 |
attggaggagggttttg |
16805599 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #20
Raw Score: 29; E-Value: 0.0000002
Query Start/End: Original strand, 71 - 146
Target Start/End: Complemental strand, 23466116 - 23466040
Alignment:
Q |
71 |
ggaaggctttgaggggttaatttgtcttcataatacaacactctgctcatttg-gggaactaaaaagttgtattgga |
146 |
Q |
|
|
||||||||||| |||||| |||| |||| ||||||||| || || |||||||| ||||||| | || |||||||||| |
|
|
T |
23466116 |
ggaaggctttggggggttcatttttctttataatacaaaaccctcctcatttgagggaactcacaaattgtattgga |
23466040 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #21
Raw Score: 29; E-Value: 0.0000002
Query Start/End: Original strand, 42 - 157
Target Start/End: Original strand, 42253893 - 42254007
Alignment:
Q |
42 |
aagtgaaagaaatagagaatattggaaggggaaggctttgaggggttaatttgtcttcataatacaacactctgctcatttgg-ggaactaaaaagttgt |
140 |
Q |
|
|
||||| ||||||||||| | | || || |||||||||| ||||||||| || |||||||||||||| || || ||||||||| ||||||||||| || | |
|
|
T |
42253893 |
aagtggaagaaatagaggaaaatgagagaggaaggcttt-aggggttaactt-tcttcataatacaaaaccctcctcatttggaggaactaaaaaattat |
42253990 |
T |
|
Q |
141 |
attggatgacggttttg |
157 |
Q |
|
|
|||| | || ||||||| |
|
|
T |
42253991 |
attgaaggagggttttg |
42254007 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #22
Raw Score: 28; E-Value: 0.0000009
Query Start/End: Original strand, 95 - 157
Target Start/End: Complemental strand, 2826342 - 2826279
Alignment:
Q |
95 |
tcttcataatacaacactctgctcatttgggg-aactaaaaagttgtattggatgacggttttg |
157 |
Q |
|
|
|||||||||||| | || || ||||||||||| ||||||||| |||||||||| || ||||||| |
|
|
T |
2826342 |
tcttcataatactaaaccctcctcatttgggggaactaaaaaattgtattggaggagggttttg |
2826279 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #23
Raw Score: 28; E-Value: 0.0000009
Query Start/End: Original strand, 83 - 146
Target Start/End: Original strand, 42622336 - 42622399
Alignment:
Q |
83 |
ggggttaatttgtcttcataatacaacactctgctcatttggggaactaaaaagttgtattgga |
146 |
Q |
|
|
||||||||| | ||||||| |||||| | | ||||||| ||||||||||||||||||||||| |
|
|
T |
42622336 |
ggggttaatatttcttcatcatacaaaatcattctcatttagggaactaaaaagttgtattgga |
42622399 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #24
Raw Score: 28; E-Value: 0.0000009
Query Start/End: Original strand, 84 - 146
Target Start/End: Original strand, 43741322 - 43741385
Alignment:
Q |
84 |
gggttaatttgtcttcataatacaacactctgctcatttgggg-aactaaaaagttgtattgga |
146 |
Q |
|
|
|||||||||| | |||||||||||| || | |||||||||| |||||||||||||||||||| |
|
|
T |
43741322 |
gggttaattttttttcataatacaaaaccttcatcatttggggtaactaaaaagttgtattgga |
43741385 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #25
Raw Score: 28; E-Value: 0.0000009
Query Start/End: Original strand, 69 - 144
Target Start/End: Original strand, 46509238 - 46509312
Alignment:
Q |
69 |
ggggaaggctttgaggggttaatttgtcttcataatacaacactctgctcatttggggaactaaaaagttgtattg |
144 |
Q |
|
|
|||||||| ||||||||||| |||| ||||||||||| || || || ||||||| | ||||||||| |||||||| |
|
|
T |
46509238 |
ggggaaggatttgaggggtttatttttcttcataatataaaac-ctcctcatttagaaaactaaaaaattgtattg |
46509312 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8 (Bit Score: 53; Significance: 1e-21; HSPs: 16)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 41 - 156
Target Start/End: Original strand, 39193863 - 39193979
Alignment:
Q |
41 |
caagtgaaagaaatagagaatattggaaggggaaggctttgaggggttaatttgtcttcataatacaacactctgctcattt-ggggaactaaaaagttg |
139 |
Q |
|
|
|||||| ||||||||||| | ||||| |||||| ||||||| ||||||||||| ||||||||||| || || || |||||| ||||||||||||||||| |
|
|
T |
39193863 |
caagtggaagaaatagagtacattgggaggggagggctttggggggttaatttttcttcataatataaaaccctcttcatttgggggaactaaaaagttg |
39193962 |
T |
|
Q |
140 |
tattggatgacggtttt |
156 |
Q |
|
|
||||||| || |||||| |
|
|
T |
39193963 |
tattggaggagggtttt |
39193979 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #2
Raw Score: 42; E-Value: 0.000000000000004
Query Start/End: Original strand, 41 - 157
Target Start/End: Complemental strand, 79762 - 79645
Alignment:
Q |
41 |
caagtgaaagaaatagagaatattggaaggggaaggctttgaggggttaatttgtcttcataatacaacactctgctcattt-ggggaactaaaaagttg |
139 |
Q |
|
|
|||||| ||||||||||| | | ||| |||||| ||||||| ||||||| || |||||||||||| | || || ||||||| ||||||||||||| ||| |
|
|
T |
79762 |
caagtggaagaaatagaggaaaatgggaggggagggctttggggggttacgttttcttcataatactaaaccctcctcatttgggggaactaaaaaattg |
79663 |
T |
|
Q |
140 |
tattggatgacggttttg |
157 |
Q |
|
|
||||||| || ||||||| |
|
|
T |
79662 |
tattggaggagggttttg |
79645 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #3
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 46 - 149
Target Start/End: Original strand, 43239607 - 43239710
Alignment:
Q |
46 |
gaaagaaatagagaatattggaaggggaaggctttgaggggttaatttgtcttcataatacaacactctgctcatttggggaactaaaaagttgtattgg |
145 |
Q |
|
|
||||||||||||| | | ||| |||||| |||||| |||||||| || ||||||||| |||| | || ||||||||||||| |||||| ||||||||| |
|
|
T |
43239607 |
gaaagaaatagaggaaaatgggaggggagggctttatggggttaacttttcttcataacacaaaagcctcctcatttggggaattaaaaaattgtattgg |
43239706 |
T |
|
Q |
146 |
atga |
149 |
Q |
|
|
|||| |
|
|
T |
43239707 |
atga |
43239710 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #4
Raw Score: 37; E-Value: 0.000000000004
Query Start/End: Original strand, 41 - 149
Target Start/End: Original strand, 8228466 - 8228574
Alignment:
Q |
41 |
caagtgaaagaaatagagaatattggaaggggaaggctttgaggggttaatttgtcttcataatacaacactctgctcatttggggaactaaaaagttgt |
140 |
Q |
|
|
|||||| ||||||||||||| | ||| | || | | ||||||||||||| || | |||||||||||| || || ||||||||||||||||||| | || |
|
|
T |
8228466 |
caagtggaagaaatagagaaaaatgggatggaagtgatttgaggggttaactttttttcataatacaaaaccctcatcatttggggaactaaaaaatcgt |
8228565 |
T |
|
Q |
141 |
attggatga |
149 |
Q |
|
|
||||||||| |
|
|
T |
8228566 |
attggatga |
8228574 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #5
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 45 - 144
Target Start/End: Complemental strand, 5911569 - 5911471
Alignment:
Q |
45 |
tgaaagaaatagagaatattggaaggggaaggctttgaggggttaatttgtcttcataatacaacactctgctcatttggggaactaaaaagttgtattg |
144 |
Q |
|
|
||||||||||| |||| ||||| ||| | |||||||||||||| |||| |||| | |||| || || || |||||||||||||||||||| |||||||| |
|
|
T |
5911569 |
tgaaagaaatacagaaaattgggaggagg-ggctttgaggggtttatttttctttaaaatataaaaccctcctcatttggggaactaaaaaattgtattg |
5911471 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #6
Raw Score: 35; E-Value: 0.00000000006
Query Start/End: Original strand, 68 - 142
Target Start/End: Original strand, 31149872 - 31149946
Alignment:
Q |
68 |
aggggaaggctttgaggggttaatttgtcttcataatacaacactctgctcatttggggaactaaaaagttgtat |
142 |
Q |
|
|
||||| || ||||| ||||||||||| ||||| |||||||| | | ||||||||||||||||||||||||||| |
|
|
T |
31149872 |
aggggtagactttggggggttaatttttcttcctaatacaaaatcatcctcatttggggaactaaaaagttgtat |
31149946 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #7
Raw Score: 34; E-Value: 0.0000000002
Query Start/End: Original strand, 41 - 157
Target Start/End: Complemental strand, 21174006 - 21173890
Alignment:
Q |
41 |
caagtgaaagaaatagagaatattggaaggggaaggctttgaggggttaatttgtcttcataatacaacactctgctcatttgg-ggaactaaaaagttg |
139 |
Q |
|
|
|||||| |||||||||| | | ||| || ||| ||||||| |||||||| || |||||||||||||| || || ||||||||| ||||||||||| || |
|
|
T |
21174006 |
caagtggaagaaatagaagaaaatgggagaggagggctttg-ggggttaacttttcttcataatacaaaaccctcctcatttggaggaactaaaaaatta |
21173908 |
T |
|
Q |
140 |
tattggatgacggttttg |
157 |
Q |
|
|
||||||| || ||||||| |
|
|
T |
21173907 |
tattggaggagggttttg |
21173890 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #8
Raw Score: 34; E-Value: 0.0000000002
Query Start/End: Original strand, 42 - 146
Target Start/End: Complemental strand, 23932705 - 23932601
Alignment:
Q |
42 |
aagtgaaagaaatagagaatattggaaggggaaggctttgaggggttaatttgtcttcataatacaacactctgctcatttgg-ggaactaaaaagttgt |
140 |
Q |
|
|
||||| ||||||||||| | | || || ||| ||||||| |||||||| || |||||||||||||| || || ||||||||| ||||||||||| |||| |
|
|
T |
23932705 |
aagtggaagaaatagaggaaaatgagagaggagggctttg-ggggttaacttttcttcataatacaaaaccctcctcatttggaggaactaaaaaattgt |
23932607 |
T |
|
Q |
141 |
attgga |
146 |
Q |
|
|
|||||| |
|
|
T |
23932606 |
attgga |
23932601 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #9
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 74 - 157
Target Start/End: Complemental strand, 26772758 - 26772674
Alignment:
Q |
74 |
aggctttgaggggttaatttgtcttcataatacaacactctgctcatttgg-ggaactaaaaagttgtattggatgacggttttg |
157 |
Q |
|
|
|||||||| | |||||| || |||||||||||||| || || ||||||| ||||||||||| ||||||||||||| ||||||| |
|
|
T |
26772758 |
aggctttgggaggttaacttttcttcataatacaaaaccctcatcatttgaaggaactaaaaaattgtattggatgagggttttg |
26772674 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #10
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 77 - 142
Target Start/End: Complemental strand, 4166755 - 4166689
Alignment:
Q |
77 |
ctttgaggggttaatttgtcttcataatacaacactctgctcatttg-gggaactaaaaagttgtat |
142 |
Q |
|
|
||||| ||||| ||||| |||||||||||||| ||||| |||||| | |||||||||||||||||| |
|
|
T |
4166755 |
ctttggggggtaaatttttcttcataatacaaaactcttctcattcgaaggaactaaaaagttgtat |
4166689 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #11
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 110 - 156
Target Start/End: Original strand, 27085350 - 27085396
Alignment:
Q |
110 |
actctgctcatttggggaactaaaaagttgtattggatgacggtttt |
156 |
Q |
|
|
||||| |||||||||||||||||||| |||||||||| || |||||| |
|
|
T |
27085350 |
actcttctcatttggggaactaaaaaattgtattggaggatggtttt |
27085396 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #12
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 116 - 166
Target Start/End: Complemental strand, 31297421 - 31297371
Alignment:
Q |
116 |
ctcatttggggaactaaaaagttgtattggatgacggttttgtgggtttat |
166 |
Q |
|
|
|||||||||||||||||||| |||||||||| || ||||||| ||| |||| |
|
|
T |
31297421 |
ctcatttggggaactaaaaaattgtattggaggagggttttggggggttat |
31297371 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #13
Raw Score: 30; E-Value: 0.00000006
Query Start/End: Original strand, 68 - 157
Target Start/End: Original strand, 44879506 - 44879595
Alignment:
Q |
68 |
aggggaaggctttgaggggttaatttgtcttcataatacaacactctgctcatttggggaactaaaaagttgtattggatgacggttttg |
157 |
Q |
|
|
||||||||| ||| ||||| |||| ||||||| || ||| | ||| ||||||| |||||||||||| |||||||||| || ||||||| |
|
|
T |
44879506 |
aggggaaggtttttgggggtgtatttttcttcatgattcaaaattctcctcatttagggaactaaaaaattgtattggaggaaggttttg |
44879595 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #14
Raw Score: 30; E-Value: 0.00000006
Query Start/End: Original strand, 68 - 157
Target Start/End: Complemental strand, 44880415 - 44880326
Alignment:
Q |
68 |
aggggaaggctttgaggggttaatttgtcttcataatacaacactctgctcatttggggaactaaaaagttgtattggatgacggttttg |
157 |
Q |
|
|
||||||||| ||| ||||| |||| ||||||| || ||| | ||| ||||||| |||||||||||| |||||||||| || ||||||| |
|
|
T |
44880415 |
aggggaaggtttttgggggtgtatttttcttcatgattcaaaattctcctcatttagggaactaaaaaattgtattggaggaaggttttg |
44880326 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #15
Raw Score: 29; E-Value: 0.0000002
Query Start/End: Original strand, 77 - 157
Target Start/End: Complemental strand, 28416272 - 28416193
Alignment:
Q |
77 |
ctttgaggggttaatttgtcttcataatacaacactctgctcatttggggaactaaaaagttgtattggatgacggttttg |
157 |
Q |
|
|
||||| ||||||| ||| |||||| |||| || || || || ||||||||||||| ||| ||||||||||||| ||||||| |
|
|
T |
28416272 |
ctttggggggttatttt-tcttcaaaatataaaaccctccttatttggggaactacaaaattgtattggatgagggttttg |
28416193 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #16
Raw Score: 28; E-Value: 0.0000009
Query Start/End: Original strand, 88 - 146
Target Start/End: Complemental strand, 1840300 - 1840241
Alignment:
Q |
88 |
taatttgtcttcataatacaacactctgctcatttgg-ggaactaaaaagttgtattgga |
146 |
Q |
|
|
|||||| ||||||| |||||| || || ||||||||| ||||||||| |||||||||||| |
|
|
T |
1840300 |
taatttttcttcatgatacaaaaccctcctcatttggaggaactaaatagttgtattgga |
1840241 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2 (Bit Score: 52; Significance: 4e-21; HSPs: 30)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 52; E-Value: 4e-21
Query Start/End: Original strand, 41 - 155
Target Start/End: Original strand, 4003360 - 4003475
Alignment:
Q |
41 |
caagtgaaagaaatagagaatattggaaggggaaggctttgaggggttaatttgtcttcataatacaacactctgctcattt-ggggaactaaaaagttg |
139 |
Q |
|
|
|||||| ||||||||||| | | ||| |||||| ||||||| ||||||||||| |||||||||||||| ||||| ||||||| |||||||| |||| ||| |
|
|
T |
4003360 |
caagtggaagaaatagaggaaaatgggaggggagggctttggggggttaatttttcttcataatacaaaactctcctcatttgggggaactcaaaaattg |
4003459 |
T |
|
Q |
140 |
tattggatgacggttt |
155 |
Q |
|
|
||||||| || ||||| |
|
|
T |
4003460 |
tattggaggagggttt |
4003475 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #2
Raw Score: 47; E-Value: 4e-18
Query Start/End: Original strand, 44 - 157
Target Start/End: Original strand, 34757540 - 34757654
Alignment:
Q |
44 |
gtgaaagaaatagagaatattggaaggggaaggctttgaggggttaatttgtcttcataatacaacactctgctcatttgg-ggaactaaaaagttgtat |
142 |
Q |
|
|
||||||||||||||||| | ||| || ||| ||||||| |||||||| | |||||||||||||| || || ||||||||| ||||||||||| |||||| |
|
|
T |
34757540 |
gtgaaagaaatagagaaaaatgggagaggagggctttggggggttaacctttcttcataatacaaaaccctcctcatttggaggaactaaaaaattgtat |
34757639 |
T |
|
Q |
143 |
tggatgacggttttg |
157 |
Q |
|
|
|||| || ||||||| |
|
|
T |
34757640 |
tggaggagggttttg |
34757654 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #3
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 42 - 156
Target Start/End: Original strand, 37194200 - 37194315
Alignment:
Q |
42 |
aagtgaaagaaatagagaatattggaaggggaaggctttgaggggttaatttgtcttcataatacaacactctgctcatttgg-ggaactaaaaagttgt |
140 |
Q |
|
|
||||| ||||||||||| | | |||||| || ||||||| |||||||| || |||||||||||||| || || ||||||||| ||||||||||| |||| |
|
|
T |
37194200 |
aagtggaagaaatagaggaaaatggaagacgagggctttggggggttaacttttcttcataatacaaaaccctcctcatttggaggaactaaaaaattgt |
37194299 |
T |
|
Q |
141 |
attggatgacggtttt |
156 |
Q |
|
|
|||||| || |||||| |
|
|
T |
37194300 |
attggaggagggtttt |
37194315 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #4
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 34 - 143
Target Start/End: Complemental strand, 16519244 - 16519135
Alignment:
Q |
34 |
gaaggatcaagtgaaagaaatagagaatattggaaggggaaggctttgaggggttaatttgtcttcataatacaacactctgctcatttgggg-aactaa |
132 |
Q |
|
|
|||||| |||||| ||||||||||| | |||||| ||||| ||||||| ||||| |||| |||||||||||||| | || ||||||||||| |||||| |
|
|
T |
16519244 |
gaaggagcaagtggaagaaatagagtacattgga-ggggagggctttggtgggttgatttttcttcataatacaaaatcctcctcatttggggaaactaa |
16519146 |
T |
|
Q |
133 |
aaagttgtatt |
143 |
Q |
|
|
||||||||||| |
|
|
T |
16519145 |
aaagttgtatt |
16519135 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #5
Raw Score: 42; E-Value: 0.000000000000004
Query Start/End: Original strand, 41 - 157
Target Start/End: Original strand, 1364765 - 1364882
Alignment:
Q |
41 |
caagtgaaagaaatagagaatattggaaggggaaggctttgaggggttaatttgtcttcataatacaacactctgctcatttgg-ggaactaaaaagttg |
139 |
Q |
|
|
|||||| |||||||||| | | ||| || ||| ||||||| |||||||| || |||||||||||||| || || ||||||||| ||||||||||| ||| |
|
|
T |
1364765 |
caagtggaagaaatagaagaaaatgggagaggagggctttggggggttaacttttcttcataatacaaaaccctcctcatttggaggaactaaaaaattg |
1364864 |
T |
|
Q |
140 |
tattggatgacggttttg |
157 |
Q |
|
|
||||||| || ||||||| |
|
|
T |
1364865 |
tattggaggagggttttg |
1364882 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #6
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 76 - 157
Target Start/End: Original strand, 11515011 - 11515093
Alignment:
Q |
76 |
gctttgaggggttaatttgtcttcataatacaacactctgctcatttgg-ggaactaaaaagttgtattggatgacggttttg |
157 |
Q |
|
|
|||||| |||||||| || |||||||||||||| || || ||||||||| ||||||||||| |||||||||| || ||||||| |
|
|
T |
11515011 |
gctttggggggttaacttttcttcataatacaaaaccctcctcatttggaggaactaaaaaattgtattggaggagggttttg |
11515093 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #7
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 41 - 146
Target Start/End: Complemental strand, 15555494 - 15555389
Alignment:
Q |
41 |
caagtgaaagaaatagagaatattggaaggggaaggctttgaggggttaatttgtcttcataatacaacactctgctcatttgg-ggaactaaaaagttg |
139 |
Q |
|
|
|||||| |||||||||| | | ||| || ||| ||||||| ||||||||||| |||||||||||||| || || ||||||||| ||||||||||| ||| |
|
|
T |
15555494 |
caagtggaagaaatagaagaaaatgggagaggagggctttg-ggggttaatttttcttcataatacaaaacccttctcatttggaggaactaaaaaattg |
15555396 |
T |
|
Q |
140 |
tattgga |
146 |
Q |
|
|
||||||| |
|
|
T |
15555395 |
tattgga |
15555389 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #8
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 84 - 149
Target Start/End: Original strand, 11949881 - 11949945
Alignment:
Q |
84 |
gggttaatttgtcttcataatacaacactctgctcatttggggaactaaaaagttgtattggatga |
149 |
Q |
|
|
||||| |||| |||||||||||||| ||||| |||||||||||||||||||| ||| ||||||||| |
|
|
T |
11949881 |
gggtttatttttcttcataatacaaaactcttctcatttggggaactaaaaa-ttgcattggatga |
11949945 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #9
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 76 - 160
Target Start/End: Original strand, 21626090 - 21626175
Alignment:
Q |
76 |
gctttgaggggttaatttgtcttcataatacaacactctgctcatttgggg-aactaaaaagttgtattggatgacggttttgtgg |
160 |
Q |
|
|
|||||| |||||||| || |||||||||||||| || | ||||||||||| |||||||||||||||||||| | |||||||||| |
|
|
T |
21626090 |
gctttggggggttaacttttcttcataatacaaaaccatcctcatttgggggaactaaaaagttgtattggagaagggttttgtgg |
21626175 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #10
Raw Score: 37; E-Value: 0.000000000004
Query Start/End: Original strand, 34 - 157
Target Start/End: Original strand, 21834866 - 21834990
Alignment:
Q |
34 |
gaaggatcaagtgaaagaaatagagaatattggaaggggaaggctttgaggggttaatttgtcttcataatacaacactctgctcattt-ggggaactaa |
132 |
Q |
|
|
|||||| |||||| |||||| |||| | || || | || | ||||||| || ||||||| ||||||||||| || ||||| ||||||| |||||||||| |
|
|
T |
21834866 |
gaaggagcaagtggaagaaacagaggacatcgggacggaagggctttggaggattaatttttcttcataatataaaactctcctcatttaggggaactaa |
21834965 |
T |
|
Q |
133 |
aaagttgtattggatgacggttttg |
157 |
Q |
|
|
||||||||||| || || ||||||| |
|
|
T |
21834966 |
aaagttgtattagaggagggttttg |
21834990 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #11
Raw Score: 37; E-Value: 0.000000000004
Query Start/End: Original strand, 78 - 157
Target Start/End: Original strand, 26905773 - 26905853
Alignment:
Q |
78 |
tttgaggggttaatttgtcttcataatacaacactctgctcatttgg-ggaactaaaaagttgtattggatgacggttttg |
157 |
Q |
|
|
||||||||||||| || ||||||| |||||| || || ||||||||| ||||||||||| |||||||||| || ||||||| |
|
|
T |
26905773 |
tttgaggggttaacttttcttcatgatacaaaaccctcctcatttggaggaactaaaaaattgtattggaggagggttttg |
26905853 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #12
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 41 - 108
Target Start/End: Complemental strand, 16625930 - 16625863
Alignment:
Q |
41 |
caagtgaaagaaatagagaatattggaaggggaaggctttgaggggttaatttgtcttcataatacaa |
108 |
Q |
|
|
|||||| ||||||||||| | ||||| |||||| ||||||| ||||||||||| ||||||| |||||| |
|
|
T |
16625930 |
caagtggaagaaatagagtacattgggaggggagggctttggggggttaatttttcttcatgatacaa |
16625863 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #13
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 95 - 157
Target Start/End: Original strand, 40211989 - 40212052
Alignment:
Q |
95 |
tcttcataatacaacactctgctcatttgg-ggaactaaaaagttgtattggatgacggttttg |
157 |
Q |
|
|
|||||||||||||| || || ||||||||| ||||||||||| ||||||||||||| ||||||| |
|
|
T |
40211989 |
tcttcataatacaaaaccctcctcatttggaggaactaaaaaattgtattggatgagggttttg |
40212052 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #14
Raw Score: 35; E-Value: 0.00000000006
Query Start/End: Original strand, 41 - 173
Target Start/End: Original strand, 31082748 - 31082881
Alignment:
Q |
41 |
caagtgaaagaaatagagaatattggaaggggaaggctttgaggggttaatttgtcttcataatacaacactctgctcatttgggg-aactaaaaagttg |
139 |
Q |
|
|
|||||| ||||||||||| | | ||| |||||| ||||||| |||||||| || ||||| |||||| | || || ||| ||||||| |||||||| ||| |
|
|
T |
31082748 |
caagtggaagaaatagaggaaaatgggaggggagggctttg-ggggttaacttttcttcgtaatactaaaccctcctcgtttgggggaactaaaatattg |
31082846 |
T |
|
Q |
140 |
tattggatgacggtttt-gtgggtttatatgaatt |
173 |
Q |
|
|
||||||| || |||||| | ||||||||||||||| |
|
|
T |
31082847 |
tattggaggagggttttggggggtttatatgaatt |
31082881 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #15
Raw Score: 34; E-Value: 0.0000000002
Query Start/End: Original strand, 116 - 157
Target Start/End: Complemental strand, 11522253 - 11522212
Alignment:
Q |
116 |
ctcatttggggaactaaaaagttgtattggatgacggttttg |
157 |
Q |
|
|
||||||||||||||||||||||||||||||| || ||||||| |
|
|
T |
11522253 |
ctcatttggggaactaaaaagttgtattggaggagggttttg |
11522212 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #16
Raw Score: 34; E-Value: 0.0000000002
Query Start/End: Original strand, 68 - 149
Target Start/End: Complemental strand, 28539547 - 28539466
Alignment:
Q |
68 |
aggggaaggctttgaggggttaatttgtcttcataatacaacactctgctcatttggggaactaaaaagttgtattggatga |
149 |
Q |
|
|
|||||| |||| || || ||||| || |||||||||| | | ||||| ||||||||||| |||||||| ||||||||||||| |
|
|
T |
28539547 |
aggggagggctctggggagttaacttttcttcataatgctaaactctcctcatttgggggactaaaaaattgtattggatga |
28539466 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #17
Raw Score: 34; E-Value: 0.0000000002
Query Start/End: Original strand, 41 - 106
Target Start/End: Complemental strand, 30072557 - 30072492
Alignment:
Q |
41 |
caagtgaaagaaatagagaatattggaaggggaaggctttgaggggttaatttgtcttcataatac |
106 |
Q |
|
|
|||||| ||||||||||| | | ||| |||||| |||||||||||||||| || |||||||||||| |
|
|
T |
30072557 |
caagtggaagaaatagaggaaaatgggaggggagggctttgaggggttaacttttcttcataatac |
30072492 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #18
Raw Score: 34; E-Value: 0.0000000002
Query Start/End: Original strand, 42 - 146
Target Start/End: Complemental strand, 35550303 - 35550201
Alignment:
Q |
42 |
aagtgaaagaaatagagaatattggaaggggaaggctttgaggggttaatttgtcttcataatacaacactctgctcatttggggaactaaaaagttgta |
141 |
Q |
|
|
||||| ||||||||||| | | |||||| ||| ||||| | ||||||| | |||||||||||| | || || |||||||||||||||||||||||||| |
|
|
T |
35550303 |
aagtggaagaaatagaggaaaatggaagtggagggcttgg--gggttaactgttcttcataatactaaaccctcctcatttggggaactaaaaagttgta |
35550206 |
T |
|
Q |
142 |
ttgga |
146 |
Q |
|
|
|||| |
|
|
T |
35550205 |
ctgga |
35550201 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #19
Raw Score: 34; E-Value: 0.0000000002
Query Start/End: Original strand, 82 - 146
Target Start/End: Complemental strand, 41100213 - 41100148
Alignment:
Q |
82 |
aggggttaatttgtct-tcataatacaacactctgctcatttggggaactaaaaagttgtattgga |
146 |
Q |
|
|
||||||||| || ||| ||||||||||| || || |||||||||||||||||||| |||||||||| |
|
|
T |
41100213 |
aggggttaacttttctatcataatacaaaaccctcctcatttggggaactaaaaaattgtattgga |
41100148 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #20
Raw Score: 34; E-Value: 0.0000000002
Query Start/End: Original strand, 84 - 141
Target Start/End: Complemental strand, 41656748 - 41656691
Alignment:
Q |
84 |
gggttaatttgtcttcataatacaacactctgctcatttggggaactaaaaagttgta |
141 |
Q |
|
|
|||||||||| |||||||||||||| ||||| |||||| |||||||| |||| ||||| |
|
|
T |
41656748 |
gggttaatttttcttcataatacaaaactctcctcattgggggaactcaaaaattgta |
41656691 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #21
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 41 - 157
Target Start/End: Original strand, 6656050 - 6656169
Alignment:
Q |
41 |
caagtgaaagaaatagagaatattggaaggggaaggctttgaggggttaatttgtcttcataatacaacactctgctcatttgg-ggaactaaa--aagt |
137 |
Q |
|
|
|||||| |||||||||| | | ||| || ||| ||||||| |||||||| || |||||||||||||| || || ||||||||| ||||||||| || | |
|
|
T |
6656050 |
caagtggaagaaatagaagaaaatgggagaggagggctttggggggttaacttttcttcataatacaaaaccctcctcatttggaggaactaaaacaaat |
6656149 |
T |
|
Q |
138 |
tgtattggatgacggttttg |
157 |
Q |
|
|
||||||||| || ||||||| |
|
|
T |
6656150 |
tgtattggaggagggttttg |
6656169 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #22
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 70 - 146
Target Start/End: Original strand, 39819860 - 39819935
Alignment:
Q |
70 |
gggaaggctttgaggggttaatttgtcttcataatacaacactctgctcatttggggaactaaaaagttgtattgga |
146 |
Q |
|
|
||||| |||||| |||||| |||| ||||| |||||||| | || |||||||||||||||||||| |||||||||| |
|
|
T |
39819860 |
gggaatgctttg-ggggttcatttttcttcctaatacaaaatcctcctcatttggggaactaaaaaattgtattgga |
39819935 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #23
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 83 - 146
Target Start/End: Complemental strand, 43572651 - 43572587
Alignment:
Q |
83 |
ggggttaatttgtcttcataatacaacactctgctcatttgg-ggaactaaaaagttgtattgga |
146 |
Q |
|
|
|||||||| || |||||||||||||| || || ||||||||| ||||||||||| |||||||||| |
|
|
T |
43572651 |
ggggttaacttttcttcataatacaaaaccctcctcatttggaggaactaaaaaattgtattgga |
43572587 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #24
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 51 - 157
Target Start/End: Complemental strand, 26599388 - 26599281
Alignment:
Q |
51 |
aaatagagaatattggaaggggaaggctttgaggggttaatttgtcttcataatacaacactctgctcattt-ggggaactaaaaagttgtattggatga |
149 |
Q |
|
|
||||||||| ||||| |||| | ||||||| |||||| |||| |||||||||||||| | || ||||||| |||||||| | || |||||||||| || |
|
|
T |
26599388 |
aaatagagagcattgggagggaagggctttggggggttcatttttcttcataatacaattccctcctcatttgggggaactcacaaattgtattggagga |
26599289 |
T |
|
Q |
150 |
cggttttg |
157 |
Q |
|
|
||||||| |
|
|
T |
26599288 |
gggttttg |
26599281 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #25
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 84 - 163
Target Start/End: Original strand, 30523222 - 30523301
Alignment:
Q |
84 |
gggttaatttgtcttcataatacaacactctgctcatttggggaactaaaaagttgtattggatgacggttttgtgggtt |
163 |
Q |
|
|
||||||| || |||||||||||||| | || || ||||||||||||||||| |||||||||| || | ||||| ||||| |
|
|
T |
30523222 |
gggttaaattttcttcataatacaaaatccttctaatttggggaactaaaaaattgtattggaggaggattttgggggtt |
30523301 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #26
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 42 - 144
Target Start/End: Complemental strand, 43190686 - 43190584
Alignment:
Q |
42 |
aagtgaaagaaatagagaatattggaaggggaaggctttgaggggttaatttgtcttcataatacaacactctgctcatttgg-ggaactaaaaagttgt |
140 |
Q |
|
|
||||| ||||||||||| | | ||| |||||| || ||||||||||||| || |||||||||||||| ||||| |||||||| |||| | |||| |||| |
|
|
T |
43190686 |
aagtggaagaaatagaggaaaatgggaggggaggg-tttgaggggttaacttttcttcataatacaaaactctcatcatttggaggaaatcaaaaattgt |
43190588 |
T |
|
Q |
141 |
attg |
144 |
Q |
|
|
|||| |
|
|
T |
43190587 |
attg |
43190584 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 42 - 108
Target Start/End: Complemental strand, 35412346 - 35412280
Alignment:
Q |
42 |
aagtgaaagaaatagagaatattggaaggggaaggctttgaggggttaatttgtcttcataatacaa |
108 |
Q |
|
|
||||| || |||||||| | ||||||| ||| ||||||| ||||||||||| |||||||||||||| |
|
|
T |
35412346 |
aagtggaaaaaatagaggacattggaaaaggagggctttggggggttaatttttcttcataatacaa |
35412280 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #28
Raw Score: 29; E-Value: 0.0000002
Query Start/End: Original strand, 42 - 145
Target Start/End: Complemental strand, 13018626 - 13018522
Alignment:
Q |
42 |
aagtgaaagaaatagagaatattggaaggggaaggctttgaggggttaatttgtcttcataatacaacactctgctcatttgg-ggaactaaaaagttgt |
140 |
Q |
|
|
||||| ||||||| ||| | | ||| || ||| ||||||| || ||||| || |||||||||||||| || || ||||||||| ||||||||||| ||| |
|
|
T |
13018626 |
aagtggaagaaatggaggaaaatgggagaggagggctttggggagttaacttttcttcataatacaaaaccctcctcatttggaggaactaaaaaaatgt |
13018527 |
T |
|
Q |
141 |
attgg |
145 |
Q |
|
|
||||| |
|
|
T |
13018526 |
attgg |
13018522 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #29
Raw Score: 28; E-Value: 0.0000009
Query Start/End: Original strand, 116 - 155
Target Start/End: Original strand, 3254643 - 3254682
Alignment:
Q |
116 |
ctcatttggggaactaaaaagttgtattggatgacggttt |
155 |
Q |
|
|
|||||||||||||||||||| ||| ||||||||| ||||| |
|
|
T |
3254643 |
ctcatttggggaactaaaaaattgcattggatgagggttt |
3254682 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #30
Raw Score: 28; E-Value: 0.0000009
Query Start/End: Original strand, 77 - 144
Target Start/End: Complemental strand, 31584878 - 31584811
Alignment:
Q |
77 |
ctttgaggggttaatttgtcttcataatacaacactctgctcatttggggaactaaaaagttgtattg |
144 |
Q |
|
|
|||||||||| | |||| |||||| |||| || || || |||||||||||||||||||| || ||||| |
|
|
T |
31584878 |
ctttgaggggcttatttttcttcaaaatataaaaccctcctcatttggggaactaaaaaattatattg |
31584811 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5 (Bit Score: 51; Significance: 2e-20; HSPs: 18)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 41 - 155
Target Start/End: Complemental strand, 43497008 - 43496895
Alignment:
Q |
41 |
caagtgaaagaaatagagaatattggaaggggaaggctttgaggggttaatttgtcttcataatacaacactctgctcatttggggaactaaaaagttgt |
140 |
Q |
|
|
||||||||||||||| || | | ||| || ||| ||||||| ||||||||||| |||| ||||||||| ||||||||||||||||||||| |||| |||| |
|
|
T |
43497008 |
caagtgaaagaaataaaggaaaatgggagaggagggctttg-ggggttaatttttcttaataatacaaaactctgctcatttggggaacttaaaaattgt |
43496910 |
T |
|
Q |
141 |
attggatgacggttt |
155 |
Q |
|
|
|||||| || ||||| |
|
|
T |
43496909 |
attggaggagggttt |
43496895 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #2
Raw Score: 42; E-Value: 0.000000000000004
Query Start/End: Original strand, 41 - 157
Target Start/End: Original strand, 10437918 - 10438035
Alignment:
Q |
41 |
caagtgaaagaaatagagaatattggaaggggaaggctttgaggggttaatttgtcttcataatacaacactctgctcattt-ggggaactaaaaagttg |
139 |
Q |
|
|
|||||| ||||||||||||| | ||| |||||| | ||||| |||||||| || |||| ||||||||| | || ||||||| | ||||||||||||||| |
|
|
T |
10437918 |
caagtggaagaaatagagaaaaatgggaggggaggtctttggggggttaacttttctttataatacaaaatcctcctcatttagaggaactaaaaagttg |
10438017 |
T |
|
Q |
140 |
tattggatgacggttttg |
157 |
Q |
|
|
||||||| || ||||||| |
|
|
T |
10438018 |
tattggaggagggttttg |
10438035 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #3
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 42 - 157
Target Start/End: Original strand, 10842978 - 10843093
Alignment:
Q |
42 |
aagtgaaagaaatagagaatattggaaggggaaggctttgaggggttaatttgtcttcataatacaacactctgctcatttgg-ggaactaaaaagttgt |
140 |
Q |
|
|
||||| ||||||||||| | | ||| || ||| ||||||| |||||||| || |||||||||||||| || || ||||||||| ||||||||||| |||| |
|
|
T |
10842978 |
aagtggaagaaatagaggaaaatgggagaggagggctttg-ggggttaacttttcttcataatacaaaaccctcctcatttggaggaactaaaaaattgt |
10843076 |
T |
|
Q |
141 |
attggatgacggttttg |
157 |
Q |
|
|
|||| | |||||||||| |
|
|
T |
10843077 |
attgaaggacggttttg |
10843093 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #4
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 68 - 173
Target Start/End: Complemental strand, 38568489 - 38568382
Alignment:
Q |
68 |
aggggaaggctttgaggggttaatttgtcttcataatacaacactctgctcattt-ggggaactaaaaagttgtattggatgacggtttt-gtgggttta |
165 |
Q |
|
|
|||||| ||||||| |||||||| || |||||||||||| | || || ||||||| ||||||||||||| || ||||||| || |||||| | ||||||| |
|
|
T |
38568489 |
aggggagggctttggggggttaacttttcttcataatactaaaccctcctcatttgggggaactaaaaaattatattggaggagggttttggggggttta |
38568390 |
T |
|
Q |
166 |
tatgaatt |
173 |
Q |
|
|
|||||||| |
|
|
T |
38568389 |
tatgaatt |
38568382 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #5
Raw Score: 37; E-Value: 0.000000000004
Query Start/End: Original strand, 41 - 140
Target Start/End: Original strand, 15974272 - 15974372
Alignment:
Q |
41 |
caagtgaaagaaatagagaatattggaaggggaaggctttgaggggttaatttgtcttcataatacaacactctgctcatttg-gggaactaaaaagttg |
139 |
Q |
|
|
|||||| ||||||||||||| | ||| |||| ||||||||| ||||||| || |||||||||||| | ||||| |||||||| | |||||||||| ||| |
|
|
T |
15974272 |
caagtggaagaaatagagaaaaatgggagggaaaggctttggagggttaacttttcttcataatactatactctcctcatttgagagaactaaaaaattg |
15974371 |
T |
|
Q |
140 |
t |
140 |
Q |
|
|
| |
|
|
T |
15974372 |
t |
15974372 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #6
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 83 - 146
Target Start/End: Complemental strand, 19389924 - 19389861
Alignment:
Q |
83 |
ggggttaatttgtcttcataatacaacactctgctcatttggggaactaaaaagttgtattgga |
146 |
Q |
|
|
|||||| |||| |||||||||||||| | || |||||||||||||||||||| |||||||||| |
|
|
T |
19389924 |
ggggttcatttatcttcataatacaaaatcctcctcatttggggaactaaaaaattgtattgga |
19389861 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #7
Raw Score: 35; E-Value: 0.00000000006
Query Start/End: Original strand, 41 - 146
Target Start/End: Complemental strand, 10955839 - 10955733
Alignment:
Q |
41 |
caagtgaaagaaatagagaatattggaaggggaaggctttgaggggttaatttgtcttcataatacaacactctgctcattt-ggggaactaaaaagttg |
139 |
Q |
|
|
|||||| ||||||||||||| | ||||| | | ||||||| |||||||| || || ||||||||||| || || ||||||| |||||||||||| ||| |
|
|
T |
10955839 |
caagtggaagaaatagagaaaaatggaaagagggggctttggggggttaacttttcatcataatacaaaaccctcctcatttgggggaactaaaagattg |
10955740 |
T |
|
Q |
140 |
tattgga |
146 |
Q |
|
|
||||||| |
|
|
T |
10955739 |
tattgga |
10955733 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #8
Raw Score: 35; E-Value: 0.00000000006
Query Start/End: Original strand, 41 - 146
Target Start/End: Complemental strand, 35683622 - 35683516
Alignment:
Q |
41 |
caagtgaaagaaatagagaatattggaaggggaaggctttgaggggttaatttgtcttcataatacaacactctgctcatttgg-ggaactaaaaagttg |
139 |
Q |
|
|
|||||| |||||||||| | | ||| || ||| ||||| | |||||||| || |||||||||||||| || || ||||||||| ||||||||||| ||| |
|
|
T |
35683622 |
caagtggaagaaatagaagaaaatgggagaggagggcttcggggggttaacttttcttcataatacaaaaccctcctcatttggaggaactaaaaaattg |
35683523 |
T |
|
Q |
140 |
tattgga |
146 |
Q |
|
|
||||||| |
|
|
T |
35683522 |
tattgga |
35683516 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #9
Raw Score: 34; E-Value: 0.0000000002
Query Start/End: Original strand, 41 - 157
Target Start/End: Complemental strand, 5772868 - 5772752
Alignment:
Q |
41 |
caagtgaaagaaatagagaatattggaaggggaaggctttgaggggttaatttgtcttcataatacaacactctgctcatttgg-ggaactaaaaagttg |
139 |
Q |
|
|
|||||| |||||||||| | | ||| || ||| ||||||| |||||||| || |||||||||||||| || || ||||||||| |||| |||||| ||| |
|
|
T |
5772868 |
caagtggaagaaatagaagaaaatgggagaggagggctttg-ggggttaacttttcttcataatacaaaaccctcctcatttggaggaattaaaaaattg |
5772770 |
T |
|
Q |
140 |
tattggatgacggttttg |
157 |
Q |
|
|
||||||| || ||||||| |
|
|
T |
5772769 |
tattggaggagggttttg |
5772752 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #10
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 51 - 142
Target Start/End: Original strand, 6044478 - 6044566
Alignment:
Q |
51 |
aaatagagaatattggaaggggaaggctttgaggggttaatttgtcttcataatacaacactctgctcatttggggaactaaaaagttgtat |
142 |
Q |
|
|
||||||| ||||| | |||||| ||||||||| ||||||||| ||||||||||| || |||| || ||||||||||||||||| |||||| |
|
|
T |
6044478 |
aaatagacgatattaggaggggatggctttgagaggttaatttttcttcataatagaaaactc--ct-atttggggaactaaaaaattgtat |
6044566 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #11
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 41 - 156
Target Start/End: Original strand, 8943979 - 8944094
Alignment:
Q |
41 |
caagtgaaagaaatagagaatattggaaggggaaggctttgaggggttaatttgtcttcataatacaacactctgctcatttgg-ggaactaaaaagttg |
139 |
Q |
|
|
|||||||||||||||||| | | | |||||||| ||||||||||||||| | | |||||||||| | || | ||||||||| ||||||||||| ||| |
|
|
T |
8943979 |
caagtgaaagaaatagaggaaaatagaaggggagagctttgaggggttaaccttttttcataatactaaaccttcctcatttggaggaactaaaaa-ttg |
8944077 |
T |
|
Q |
140 |
tattggatgacggtttt |
156 |
Q |
|
|
||| |||||| |||||| |
|
|
T |
8944078 |
tatcggatgagggtttt |
8944094 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #12
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 75 - 146
Target Start/End: Original strand, 39649537 - 39649609
Alignment:
Q |
75 |
ggctttgaggggttaatttgtcttcataatacaacactctgctcatttgg-ggaactaaaaagttgtattgga |
146 |
Q |
|
|
||||||| |||||||| || ||||||| |||||| || || ||||||||| ||||||||||| |||||||||| |
|
|
T |
39649537 |
ggctttggggggttaacttttcttcatgatacaaaaccctcctcatttggaggaactaaaaaattgtattgga |
39649609 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #13
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 68 - 138
Target Start/End: Complemental strand, 21916415 - 21916344
Alignment:
Q |
68 |
aggggaaggctttgaggggttaatttgtcttcataatacaacactctgctcattt-ggggaactaaaaagtt |
138 |
Q |
|
|
|||||| | ||||||||||||||||| ||||||| |||||| || || || |||| |||||||||||||||| |
|
|
T |
21916415 |
aggggaggactttgaggggttaatttttcttcatgatacaaaaccctccttatttgggggaactaaaaagtt |
21916344 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #14
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 87 - 149
Target Start/End: Complemental strand, 3925883 - 3925821
Alignment:
Q |
87 |
ttaatttgtcttcataatacaacactctgctcatttggggaactaaaaagttgtattggatga |
149 |
Q |
|
|
||||||| ||||||| ||| | | ||| |||||||||||||||||||| ||||||||||||| |
|
|
T |
3925883 |
ttaatttttcttcatgatatagaattctcctcatttggggaactaaaaaattgtattggatga |
3925821 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #15
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 33 - 173
Target Start/End: Complemental strand, 9684937 - 9684796
Alignment:
Q |
33 |
tgaaggatcaagtgaaagaaatagagaatattggaaggggaaggctttgaggggttaatttgtcttcataatacaacactctgctcattt-ggggaacta |
131 |
Q |
|
|
||||||| ||||||||||||||||| |||||| |||||||||||||| | || | || |||||||||||||| || || ||||||| |||||| || |
|
|
T |
9684937 |
tgaaggagcaagtgaaagaaatagatgatattgagaggggaaggctttg-gtatttcaattttcttcataatacaaaaccctcctcatttgggggaatta |
9684839 |
T |
|
Q |
132 |
aaaagttgtattggatgacggtttt-gtgggtttatatgaatt |
173 |
Q |
|
|
|||| ||| |||| | || |||||| | ||||||| ||||||| |
|
|
T |
9684838 |
aaaaattgcattgaaggaaggttttggggggtttacatgaatt |
9684796 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #16
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 83 - 149
Target Start/End: Original strand, 22103491 - 22103556
Alignment:
Q |
83 |
ggggttaatttgtcttcataatacaacactctgctcatttggggaactaaaaagttgtattggatga |
149 |
Q |
|
|
||||||||||| |||||||||||||| || || ||||| ||||||||||||| |||||||| |||| |
|
|
T |
22103491 |
ggggttaatttttcttcataatacaaaaccctcatcattcggggaactaaaaa-ttgtattgaatga |
22103556 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #17
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 90 - 156
Target Start/End: Original strand, 29022600 - 29022666
Alignment:
Q |
90 |
atttgtcttcataatacaacactctgctcatttggggaactaaaaagttgtattggatgacggtttt |
156 |
Q |
|
|
|||| |||||| |||| || ||||| ||||||| ||||||||||| |||||||||| ||||||||| |
|
|
T |
29022600 |
atttttcttcaaaatataaaactctcctcatttaaggaactaaaaaattgtattggaggacggtttt |
29022666 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #18
Raw Score: 28; E-Value: 0.0000009
Query Start/End: Original strand, 90 - 144
Target Start/End: Original strand, 5836869 - 5836924
Alignment:
Q |
90 |
atttgtcttcataatacaacactctgctcattt-ggggaactaaaaagttgtattg |
144 |
Q |
|
|
|||| |||||||||||||| ||||| ||||||| |||||||| |||| |||||||| |
|
|
T |
5836869 |
atttttcttcataatacaaaactcttctcatttgggggaacttaaaaattgtattg |
5836924 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1 (Bit Score: 51; Significance: 2e-20; HSPs: 35)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 41 - 146
Target Start/End: Original strand, 36269675 - 36269781
Alignment:
Q |
41 |
caagtgaaagaaatagagaatattggaaggggaaggctttgaggggttaatttgtcttcataatacaacactctgctcattt-ggggaactaaaaagttg |
139 |
Q |
|
|
|||||| ||||||||||||| | ||| |||||| ||||||| |||||||| || |||||||||||||| || || ||||||| ||||||||||||| ||| |
|
|
T |
36269675 |
caagtggaagaaatagagaaaaatgggaggggagggctttggggggttaacttttcttcataatacaaaaccctcctcatttgggggaactaaaaaattg |
36269774 |
T |
|
Q |
140 |
tattgga |
146 |
Q |
|
|
||||||| |
|
|
T |
36269775 |
tattgga |
36269781 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #2
Raw Score: 42; E-Value: 0.000000000000004
Query Start/End: Original strand, 41 - 157
Target Start/End: Original strand, 5584437 - 5584554
Alignment:
Q |
41 |
caagtgaaagaaatagagaatattggaaggggaaggctttgaggggttaatttgtcttcataatacaacactctgctcatttgg-ggaactaaaaagttg |
139 |
Q |
|
|
|||||| |||||||||| | | ||| || ||| ||||||| |||||||| || |||||||||||||| || || ||||||||| ||||||||||| ||| |
|
|
T |
5584437 |
caagtggaagaaatagaagaaaatgggagaggagggctttggggggttaacttttcttcataatacaaaaccctcctcatttggaggaactaaaaaattg |
5584536 |
T |
|
Q |
140 |
tattggatgacggttttg |
157 |
Q |
|
|
||||||| || ||||||| |
|
|
T |
5584537 |
tattggaggagggttttg |
5584554 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #3
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 83 - 157
Target Start/End: Complemental strand, 52068244 - 52068169
Alignment:
Q |
83 |
ggggttaatttgtcttcataatacaacactctgctcatttgg-ggaactaaaaagttgtattggatgacggttttg |
157 |
Q |
|
|
|||||||| || |||||||||||||| ||||| ||||||||| ||||||||||| |||||||||| || ||||||| |
|
|
T |
52068244 |
ggggttaacttttcttcataatacaaaactctcctcatttggaggaactaaaaaattgtattggaggagggttttg |
52068169 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #4
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 41 - 146
Target Start/End: Complemental strand, 17760624 - 17760518
Alignment:
Q |
41 |
caagtgaaagaaatagagaatattggaaggggaaggctttgaggggttaatttgtcttcataatacaacactctgctcatttgg-ggaactaaaaagttg |
139 |
Q |
|
|
|||||| ||||||||||| | | ||| || ||| |||||| |||||||| || |||||||||||||| || || ||||||||| ||||||||||| ||| |
|
|
T |
17760624 |
caagtggaagaaatagaggaaaatgggagaggagagctttggggggttaacttttcttcataatacaaaaccctcctcatttggaggaactaaaaaattg |
17760525 |
T |
|
Q |
140 |
tattgga |
146 |
Q |
|
|
||||||| |
|
|
T |
17760524 |
tattgga |
17760518 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #5
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 42 - 146
Target Start/End: Original strand, 29092020 - 29092124
Alignment:
Q |
42 |
aagtgaaagaaatagagaatattggaaggggaaggctttgaggggttaatttgtcttcataatacaacactctgctcatttgg-ggaactaaaaagttgt |
140 |
Q |
|
|
||||| ||||||||||| | | ||| || ||| ||||||| |||||||| || |||||||||||||| || || ||||||||| ||||||||||| |||| |
|
|
T |
29092020 |
aagtggaagaaatagaggaaaatgggagaggagggctttg-ggggttaacttttcttcataatacaaaaccctcctcatttggaggaactaaaaaattgt |
29092118 |
T |
|
Q |
141 |
attgga |
146 |
Q |
|
|
|||||| |
|
|
T |
29092119 |
attgga |
29092124 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #6
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 68 - 157
Target Start/End: Complemental strand, 41432887 - 41432798
Alignment:
Q |
68 |
aggggaaggctttgaggggttaatttgtcttcataatacaacactctgctcatttggggaactaaaaagttgtattggatgacggttttg |
157 |
Q |
|
|
|||||||||||||| ||| || |||| ||||||||||| || || || ||||||||||| ||| |||| |||||||||| || ||||||| |
|
|
T |
41432887 |
aggggaaggctttgggggtttcatttttcttcataatataaaaccctcctcatttgggggactcaaaatttgtattggaggagggttttg |
41432798 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #7
Raw Score: 37; E-Value: 0.000000000004
Query Start/End: Original strand, 86 - 146
Target Start/End: Original strand, 42333622 - 42333682
Alignment:
Q |
86 |
gttaatttgtcttcataatacaacactctgctcatttggggaactaaaaagttgtattgga |
146 |
Q |
|
|
|||||||| |||||||||||||| || || ||||||| |||||||||| |||||||||||| |
|
|
T |
42333622 |
gttaatttttcttcataatacaaaaccctcctcatttagggaactaaagagttgtattgga |
42333682 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #8
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 48 - 173
Target Start/End: Complemental strand, 5970572 - 5970446
Alignment:
Q |
48 |
aagaaatagagaatattggaaggggaaggctttgaggggttaatttgtcttcataatacaacactctgctcatttgg-ggaactaaaaagttgtattgga |
146 |
Q |
|
|
||||||||||| | ||| | |||||| ||||||| ||||||||||| ||||||||||| | || || | ||||| |||||||||||||||||||||| |
|
|
T |
5970572 |
aagaaatagagtacattaggaggggagggctttg-ggggttaatttttcttcataatatagaaccctcattgtttggtggaactaaaaagttgtattgga |
5970474 |
T |
|
Q |
147 |
tga-cggttttgtgggtttatatgaatt |
173 |
Q |
|
|
||| | ||||| ||||||||||||||| |
|
|
T |
5970473 |
tgagagtttttgagggtttatatgaatt |
5970446 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #9
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 42 - 156
Target Start/End: Complemental strand, 37649764 - 37649649
Alignment:
Q |
42 |
aagtgaaagaaatagagaatattggaaggggaaggctttgaggggttaatttgtcttcataatacaacactctgctcatttgg-ggaactaaaaagttgt |
140 |
Q |
|
|
||||| ||||||||||| | | ||| || ||| ||||||| || ||||| || |||| ||||||||| || || ||||||||| ||||||||||| |||| |
|
|
T |
37649764 |
aagtggaagaaatagaggaaaatgggagaggagggctttggggtgttaacttttctttataatacaaaaccctcctcatttggaggaactaaaaaattgt |
37649665 |
T |
|
Q |
141 |
attggatgacggtttt |
156 |
Q |
|
|
|||||| || |||||| |
|
|
T |
37649664 |
attggaggagggtttt |
37649649 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #10
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 44 - 173
Target Start/End: Original strand, 50225975 - 50226106
Alignment:
Q |
44 |
gtgaaagaaatagagaatattggaaggggaaggctttgaggggttaatttgtcttcataatacaacactctgctcatttgg-ggaactaaaaagttgtat |
142 |
Q |
|
|
||||||||||||||| | | || |||| |||| |||| |||||||| || ||||||||||| | || || ||||||||| |||||||||| |||||| |
|
|
T |
50225975 |
gtgaaagaaatagaggaaaatgaaaggcgaagattttggggggttaacttttcttcataatattaaacccttctcatttggaagaactaaaaaattgtat |
50226074 |
T |
|
Q |
143 |
tggatga-cggttttgtgggtttatatgaatt |
173 |
Q |
|
|
|||| || || ||||| ||||||||||||||| |
|
|
T |
50226075 |
tggaggagcgtttttgagggtttatatgaatt |
50226106 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #11
Raw Score: 34; E-Value: 0.0000000002
Query Start/End: Original strand, 95 - 156
Target Start/End: Original strand, 33579221 - 33579282
Alignment:
Q |
95 |
tcttcataatacaacactctgctcatttggggaactaaaaagttgtattggatgacggtttt |
156 |
Q |
|
|
|||| ||||||||| || || ||||||||||||||| ||||||||||||||| || |||||| |
|
|
T |
33579221 |
tctttataatacaaaaccctcctcatttggggaactcaaaagttgtattggaggagggtttt |
33579282 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #12
Raw Score: 34; E-Value: 0.0000000002
Query Start/End: Original strand, 42 - 146
Target Start/End: Complemental strand, 34154476 - 34154371
Alignment:
Q |
42 |
aagtgaaagaaatagagaatattggaaggggaaggctttgaggggttaatttgtcttcataatacaacactctgctcatttgg-ggaactaaaaagttgt |
140 |
Q |
|
|
||||| ||||||||||| | | || ||| || ||||||| |||||||| || |||||||||||||| || | ||||||||| ||||||||||| |||| |
|
|
T |
34154476 |
aagtggaagaaatagaggaaaatgaaagatgagggctttggggggttaacttttcttcataatacaaaaccttcctcatttggaggaactaaaaaattgt |
34154377 |
T |
|
Q |
141 |
attgga |
146 |
Q |
|
|
|||||| |
|
|
T |
34154376 |
attgga |
34154371 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #13
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 42 - 172
Target Start/End: Original strand, 17556601 - 17556732
Alignment:
Q |
42 |
aagtgaaagaaatagagaatattggaaggggaaggctttgaggggttaatttgtcttcataatacaacactctgctcatttgggg-aactaaaaagttgt |
140 |
Q |
|
|
||||| ||||||||||| | ||||| ||| || ||||||| |||| | |||| |||||| |||| || || || ||||||||||| ||||||||| || | |
|
|
T |
17556601 |
aagtggaagaaatagaggacattgggaggaga-ggctttggggggcttatttttcttcaaaatataaaaccctcctcatttgggggaactaaaaaattct |
17556699 |
T |
|
Q |
141 |
attggatgacggtttt-gtgggtttatatgaat |
172 |
Q |
|
|
|||||| || |||||| | |||||||||||||| |
|
|
T |
17556700 |
attggaggagggttttggggggtttatatgaat |
17556732 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #14
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 75 - 173
Target Start/End: Original strand, 33324600 - 33324699
Alignment:
Q |
75 |
ggctttgaggggttaatttgtcttcataatacaacactctgctcatttg-gggaactaaaaagttgtattggatgacggtttt-gtgggtttatatgaat |
172 |
Q |
|
|
||||||| |||||||| || |||||||||||| | || || |||||||| |||||||||||| ||||||| || || |||||| | |||||||||||||| |
|
|
T |
33324600 |
ggctttggggggttaacttttcttcataatactaaaccctcctcatttgagggaactaaaaa-ttgtattagaggagggttttagagggtttatatgaat |
33324698 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #15
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 42 - 157
Target Start/End: Complemental strand, 41817446 - 41817331
Alignment:
Q |
42 |
aagtgaaagaaatagagaatattggaaggggaaggctttgaggggttaatttgtcttcataatacaacactctgctcatttgg-ggaactaaaaagttgt |
140 |
Q |
|
|
||||| ||||||||||| | | ||| || ||| | ||||| |||||||| || |||||||||||||| || || |||||||| ||||||||||| |||| |
|
|
T |
41817446 |
aagtggaagaaatagaggaaaatgggagaggaggactttg-ggggttaacttttcttcataatacaaaaccctcatcatttggaggaactaaaaaattgt |
41817348 |
T |
|
Q |
141 |
attggatgacggttttg |
157 |
Q |
|
|
|||||| || ||||||| |
|
|
T |
41817347 |
attggaggagggttttg |
41817331 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #16
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 48 - 139
Target Start/End: Complemental strand, 33854980 - 33854889
Alignment:
Q |
48 |
aagaaatagagaatattggaaggggaaggctttgaggggttaatttgtcttcataatacaacactctgctcatttggggaactaaaaagttg |
139 |
Q |
|
|
||||||||||| ||||| | |||||| | |||| |||||||||| |||||||||||||| || || ||| ||||| ||||||||||||| |
|
|
T |
33854980 |
aagaaatagaggatattaggaggggagtgttttgcagggttaatttttcttcataatacaaaaccctcttcaattgggaaactaaaaagttg |
33854889 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #17
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 48 - 139
Target Start/End: Original strand, 33925942 - 33926033
Alignment:
Q |
48 |
aagaaatagagaatattggaaggggaaggctttgaggggttaatttgtcttcataatacaacactctgctcatttggggaactaaaaagttg |
139 |
Q |
|
|
||||||||||| ||||| | |||||| | |||| |||||||||| |||||||||||||| || || ||| ||||| ||||||||||||| |
|
|
T |
33925942 |
aagaaatagaggatattaggaggggagtgttttgcagggttaatttttcttcataatacaaaaccctcttcaattgggaaactaaaaagttg |
33926033 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #18
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 78 - 165
Target Start/End: Original strand, 50097597 - 50097684
Alignment:
Q |
78 |
tttgaggggttaatttgtcttcataatacaacactctgctcatttggggaactaaaaagttgtattggatgacggttttgtgggttta |
165 |
Q |
|
|
|||| |||||| |||| |||||| |||| || || | || ||||| ||||||||||||||||||||||||| | ||||| ||||||| |
|
|
T |
50097597 |
tttggggggtttatttttcttcaaaatataaaaccatccttatttgaggaactaaaaagttgtattggatgaggtttttgagggttta |
50097684 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 42 - 146
Target Start/End: Original strand, 47742464 - 47742570
Alignment:
Q |
42 |
aagtgaaagaaatagagaatattggaaggggaaggctttgaggggttaatttgtcttcataataca-acactctgctcatttgggg-aactaaaaagttg |
139 |
Q |
|
|
||||| ||||||||||| | |||| | |||| ||||||| ||||||||||| | ||| ||||||| | || || |||||| |||| ||||||||||||| |
|
|
T |
47742464 |
aagtggaagaaatagaggacattgagaagggagggctttggggggttaatttttgttcctaatacataaaccctcctcattcggggaaactaaaaagttg |
47742563 |
T |
|
Q |
140 |
tattgga |
146 |
Q |
|
|
||||||| |
|
|
T |
47742564 |
tattgga |
47742570 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 123 - 173
Target Start/End: Complemental strand, 51246629 - 51246579
Alignment:
Q |
123 |
ggggaactaaaaagttgtattggatgacggttttgtgggtttatatgaatt |
173 |
Q |
|
|
|||||||| |||| |||||||||| || ||||||| ||||||||||||||| |
|
|
T |
51246629 |
ggggaactcaaaaattgtattggaggagggttttgagggtttatatgaatt |
51246579 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #21
Raw Score: 30; E-Value: 0.00000006
Query Start/End: Original strand, 67 - 144
Target Start/End: Original strand, 69692 - 69769
Alignment:
Q |
67 |
aaggggaaggctttgaggggttaatttgtcttcataatacaacactctgctcatttggggaactaaaaagttgtattg |
144 |
Q |
|
|
||||||| || |||| |||||||| || |||||||||||| | || || ||| |||| ||||||||||| |||||||| |
|
|
T |
69692 |
aaggggagggttttggggggttaacttttcttcataatactaaaccctcctcgtttgaggaactaaaaaattgtattg |
69769 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #22
Raw Score: 30; E-Value: 0.00000006
Query Start/End: Original strand, 42 - 173
Target Start/End: Complemental strand, 35619651 - 35619519
Alignment:
Q |
42 |
aagtgaaagaaatagagaatattggaaggggaaggctttgaggggttaatttgtcttcataatacaacactctgctcatttg-gggaactaaaaagttgt |
140 |
Q |
|
|
|||||||||||||| | ||||||||||| | ||||||| | || | |||| |||||| |||| || ||||| |||| || |||||||||||| |||| |
|
|
T |
35619651 |
aagtgaaagaaataaatgatattggaaggagg-ggctttgggaggcttatttttcttcaaaatataaaactctaatcatctgagggaactaaaaaattgt |
35619553 |
T |
|
Q |
141 |
attggatgacggttttg-tgggtttatatgaatt |
173 |
Q |
|
|
||||||||| ||||||| |||||| |||||||| |
|
|
T |
35619552 |
attggatgagggttttgaagggtttgtatgaatt |
35619519 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #23
Raw Score: 30; E-Value: 0.00000006
Query Start/End: Original strand, 68 - 146
Target Start/End: Complemental strand, 39887048 - 39886968
Alignment:
Q |
68 |
aggggaaggctttgaggggttaatttgtcttcataatacaacactctgctcatttg--gggaactaaaaagttgtattgga |
146 |
Q |
|
|
|||||| ||||||| | |||||| || |||||||||||| | || || |||||||| |||||||||||| |||||||||| |
|
|
T |
39887048 |
aggggagggctttgggtggttaacttttcttcataatactaaaccctcctcatttggtgggaactaaaaaattgtattgga |
39886968 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #24
Raw Score: 30; E-Value: 0.00000006
Query Start/End: Original strand, 42 - 146
Target Start/End: Complemental strand, 43036459 - 43036356
Alignment:
Q |
42 |
aagtgaaagaaatagagaatattggaaggggaaggctttgaggggttaatttgtcttcataatacaacactctgctcatttggg-gaactaaaaagttgt |
140 |
Q |
|
|
||||| ||||||||||| | ||||| ||| | ||||||| ||||||||||| |||||| |||| || || || |||||||||| |||||||||| |||| |
|
|
T |
43036459 |
aagtggaagaaatagagtacattgggaggagg-ggctttggggggttaatttttcttca-aatataaaaccctcctcatttgggagaactaaaaaattgt |
43036362 |
T |
|
Q |
141 |
attgga |
146 |
Q |
|
|
|||||| |
|
|
T |
43036361 |
attgga |
43036356 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #25
Raw Score: 30; E-Value: 0.00000006
Query Start/End: Original strand, 34 - 173
Target Start/End: Original strand, 50586973 - 50587110
Alignment:
Q |
34 |
gaaggatcaagtgaaagaaatagagaatattggaaggggaaggctttgaggggttaatttgtcttcataatacaacactctgctcatttggggaactaaa |
133 |
Q |
|
|
|||||| |||||| ||||||||||| | |||| |||| | ||||||| |||||| |||| |||||||||||||| | || |||||||||| | |||| |
|
|
T |
50586973 |
gaaggagcaagtggaagaaatagaggacattgagaggg-agggctttggggggttcatttttcttcataatacaaaatcctcctcatttgggccattaaa |
50587071 |
T |
|
Q |
134 |
aagttgtattggatgacggttttg-tgggtttatatgaatt |
173 |
Q |
|
|
| ||| |||||| || ||||||| ||||||||||||||| |
|
|
T |
50587072 |
a--ttgcattggaggagggttttgaagggtttatatgaatt |
50587110 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #26
Raw Score: 30; E-Value: 0.00000006
Query Start/End: Original strand, 34 - 173
Target Start/End: Complemental strand, 52073603 - 52073463
Alignment:
Q |
34 |
gaaggatcaagtgaaagaaatagagaatattggaaggggaaggctttgaggggttaatttgtcttcataatacaacactctgctcattt-ggggaactaa |
132 |
Q |
|
|
|||||| |||||| |||||||||| | |||| |||||||||||||| ||| || |||| |||||||||| ||| || || ||||||| |||||||| | |
|
|
T |
52073603 |
gaaggagcaagtggaagaaatagatgacattgagaggggaaggctttg-gggtttcatttttcttcataattcaaaaccctcctcatttgggggaactca |
52073505 |
T |
|
Q |
133 |
aaagttgtattggatgacggtttt-gtgggtttatatgaatt |
173 |
Q |
|
|
||| ||||| | || || |||||| | ||||||| ||||||| |
|
|
T |
52073504 |
aaaattgtactagaggagggttttggagggtttagatgaatt |
52073463 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #27
Raw Score: 29; E-Value: 0.0000002
Query Start/End: Original strand, 34 - 157
Target Start/End: Original strand, 7915438 - 7915562
Alignment:
Q |
34 |
gaaggatcaagtgaaagaaatagagaatattggaaggggaaggctttgaggggttaatttgtcttcataatacaacactctgctca-tttggggaactaa |
132 |
Q |
|
|
|||||| |||||| || |||||||||| |||| || ||| ||||||| |||||| |||| ||||||||||| | || || |||| ||||||| | | | |
|
|
T |
7915438 |
gaaggagcaagtggaaaaaatagagaactttgggagaggagggctttggggggttcatttttcttcataatatagaaccctcctcattttgggggattca |
7915537 |
T |
|
Q |
133 |
aaagttgtattggatgacggttttg |
157 |
Q |
|
|
||| |||||||||| || ||||||| |
|
|
T |
7915538 |
aaaattgtattggaggagggttttg |
7915562 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #28
Raw Score: 29; E-Value: 0.0000002
Query Start/End: Original strand, 41 - 144
Target Start/End: Complemental strand, 27102973 - 27102869
Alignment:
Q |
41 |
caagtgaaagaaatagagaatattggaaggggaaggctttgaggggttaatttgtcttcataatacaacactctgctcatttgggg-aactaaaaagttg |
139 |
Q |
|
|
||||||||||||||||| ||||| | |||||| |||||| | |||| |||| |||||||||||||| | || |||||||||| |||| |||| ||| |
|
|
T |
27102973 |
caagtgaaagaaatagaagatatttggaggggagtgctttgggaggttcatttttcttcataatacaaaatgctcttcatttggggaaactcaaaaattg |
27102874 |
T |
|
Q |
140 |
tattg |
144 |
Q |
|
|
||||| |
|
|
T |
27102873 |
tattg |
27102869 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #29
Raw Score: 29; E-Value: 0.0000002
Query Start/End: Original strand, 70 - 157
Target Start/End: Complemental strand, 28848908 - 28848821
Alignment:
Q |
70 |
gggaaggctttgaggggttaatttgtcttcataatacaacactctgctcattt-ggggaactaaaaagttgtattggatgacggttttg |
157 |
Q |
|
|
|||||||||||| ||| || |||| ||||||||| |||| || || ||||||| |||||||| |||| |||||||||| || ||||||| |
|
|
T |
28848908 |
gggaaggctttg-gggtttcatttttcttcataacacaaaaccctcctcatttgggggaactcaaaaattgtattggaggagggttttg |
28848821 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #30
Raw Score: 29; E-Value: 0.0000002
Query Start/End: Original strand, 117 - 157
Target Start/End: Original strand, 32287589 - 32287629
Alignment:
Q |
117 |
tcatttggggaactaaaaagttgtattggatgacggttttg |
157 |
Q |
|
|
||||||| ||||||||||| ||||||||||||| ||||||| |
|
|
T |
32287589 |
tcatttgaggaactaaaaaattgtattggatgagggttttg |
32287629 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #31
Raw Score: 29; E-Value: 0.0000002
Query Start/End: Original strand, 41 - 156
Target Start/End: Original strand, 36886802 - 36886917
Alignment:
Q |
41 |
caagtgaaagaaatagagaatattggaaggggaaggctttgaggggttaatttgtcttcataatacaacactctgctcattt-ggggaactaaaaagttg |
139 |
Q |
|
|
|||||| ||||||||||| | | || |||||| ||||||| |||||||| || |||||||||||| | || | ||||||| ||||||||||||| ||| |
|
|
T |
36886802 |
caagtggaagaaatagaggaaaatgagaggggagggctttg-ggggttaacttttcttcataatactaaacccccctcattttggggaactaaaaaattg |
36886900 |
T |
|
Q |
140 |
tattggatgacggtttt |
156 |
Q |
|
|
|||||| || |||||| |
|
|
T |
36886901 |
cattggaggagggtttt |
36886917 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #32
Raw Score: 29; E-Value: 0.0000002
Query Start/End: Original strand, 78 - 146
Target Start/End: Complemental strand, 41428105 - 41428037
Alignment:
Q |
78 |
tttgaggggttaatttgtcttcataatacaacactctgctcatttggggaactaaaaagttgtattgga |
146 |
Q |
|
|
||||| |||||||||| |||||||||| || | ||| ||||||||||||||| |||| || ||||||| |
|
|
T |
41428105 |
tttgaagggttaatttttcttcataatgaaagaatctcctcatttggggaactcaaaaattatattgga |
41428037 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #33
Raw Score: 28; E-Value: 0.0000009
Query Start/End: Original strand, 95 - 157
Target Start/End: Original strand, 2909104 - 2909167
Alignment:
Q |
95 |
tcttcataatacaacactctgctcatttgg-ggaactaaaaagttgtattggatgacggttttg |
157 |
Q |
|
|
||||||||||| || || || ||||||||| ||||||||||| |||||||||| || ||||||| |
|
|
T |
2909104 |
tcttcataatagaaaaccctactcatttggaggaactaaaaaattgtattggaggagggttttg |
2909167 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #34
Raw Score: 28; E-Value: 0.0000009
Query Start/End: Original strand, 117 - 164
Target Start/End: Complemental strand, 25561389 - 25561342
Alignment:
Q |
117 |
tcatttggggaactaaaaagttgtattggatgacggttttgtgggttt |
164 |
Q |
|
|
||||||||||||||||||| || ||||||| || ||||||| |||||| |
|
|
T |
25561389 |
tcatttggggaactaaaaaattatattggaggagggttttgggggttt |
25561342 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #35
Raw Score: 28; E-Value: 0.0000009
Query Start/End: Original strand, 41 - 135
Target Start/End: Original strand, 27255141 - 27255236
Alignment:
Q |
41 |
caagtgaaagaaatagagaatattggaaggggaaggctttgaggggttaatttgtcttcataatacaacactctgctcatttg-gggaactaaaaa |
135 |
Q |
|
|
|||||| ||||||||||| | | ||| || ||| ||||||| | |||||| || |||||||||||||| || || |||||||| ||||||||||| |
|
|
T |
27255141 |
caagtggaagaaatagaggaaaatgggagaggagggctttgggaggttaacttttcttcataatacaaaaccctcctcatttgaaggaactaaaaa |
27255236 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3 (Bit Score: 48; Significance: 1e-18; HSPs: 30)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 34 - 157
Target Start/End: Original strand, 29623163 - 29623285
Alignment:
Q |
34 |
gaaggatcaagtgaaagaaatagagaatattggaaggggaaggctttgaggggttaatttgtcttcataatacaacactctgctcatttggggaactaaa |
133 |
Q |
|
|
|||||| |||||| ||||||||||| | ||| | |||||| |||||||| || ||||||| |||||||||||||| || || |||||||||| |||| || |
|
|
T |
29623163 |
gaaggagcaagtggaagaaatagaggacattaggaggggagggctttgatgg-ttaatttttcttcataatacaaaaccctcctcatttgggaaactcaa |
29623261 |
T |
|
Q |
134 |
aagttgtattggatgacggttttg |
157 |
Q |
|
|
||||||||||| | || ||||||| |
|
|
T |
29623262 |
aagttgtattgcaggagggttttg |
29623285 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #2
Raw Score: 45; E-Value: 7e-17
Query Start/End: Original strand, 42 - 157
Target Start/End: Original strand, 38639522 - 38639638
Alignment:
Q |
42 |
aagtgaaagaaatagagaatattggaaggggaaggctttgaggggttaatttgtcttcataatacaacactctgctcatttgg-ggaactaaaaagttgt |
140 |
Q |
|
|
||||| ||||||||||| | | ||| || |||||| |||| |||||||| || |||||||||||||| || || ||||||||| ||||||||||| |||| |
|
|
T |
38639522 |
aagtggaagaaatagaggaaaatgggagaggaaggttttggggggttaacttttcttcataatacaaaaccctcctcatttggaggaactaaaaaattgt |
38639621 |
T |
|
Q |
141 |
attggatgacggttttg |
157 |
Q |
|
|
|||||| || ||||||| |
|
|
T |
38639622 |
attggaggagggttttg |
38639638 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #3
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 42 - 164
Target Start/End: Original strand, 3537141 - 3537264
Alignment:
Q |
42 |
aagtgaaagaaatagagaatattggaaggggaaggctttgaggggttaatttgtcttcataatacaacactctgctcattt-ggggaactaaaaagttgt |
140 |
Q |
|
|
||||| ||||||||||| | | ||| |||||| ||||||| | |||||| || |||||||||||||| || || ||||||| ||||||||||||| |||| |
|
|
T |
3537141 |
aagtggaagaaatagaggaaaatgggaggggagggctttgggaggttaacttttcttcataatacaaaaccctcctcatttgggggaactaaaaaattgt |
3537240 |
T |
|
Q |
141 |
attggatgacggttttgtgggttt |
164 |
Q |
|
|
|||||| || |||||| |||||| |
|
|
T |
3537241 |
attggaggagagttttgggggttt |
3537264 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #4
Raw Score: 42; E-Value: 0.000000000000004
Query Start/End: Original strand, 34 - 135
Target Start/End: Original strand, 30995796 - 30995896
Alignment:
Q |
34 |
gaaggatcaagtgaaagaaatagagaatattggaaggggaaggctttgaggggttaatttgtcttcataatacaacactctgctcatttggggaactaaa |
133 |
Q |
|
|
|||||| ||| || |||||||||| ||||||| || | |||| |||| | ||||||||| |||||||||||||| ||||| |||||||||||||||||| |
|
|
T |
30995796 |
gaaggaacaaatggaagaaatagaagatattgggagag-aagggtttgggaggttaatttttcttcataatacaaaactctactcatttggggaactaaa |
30995894 |
T |
|
Q |
134 |
aa |
135 |
Q |
|
|
|| |
|
|
T |
30995895 |
aa |
30995896 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #5
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 42 - 157
Target Start/End: Complemental strand, 33944787 - 33944672
Alignment:
Q |
42 |
aagtgaaagaaatagagaatattggaaggggaaggctttgaggggttaatttgtcttcataatacaacactctgctcatttgg-ggaactaaaaagttgt |
140 |
Q |
|
|
||||| ||||||||||| | | ||| || ||| ||||||| |||||||| || |||||||||||||| || || ||||||||| ||||||||||| |||| |
|
|
T |
33944787 |
aagtggaagaaatagaggaaaatgggagaggagggctttg-ggggttaacttttcttcataatacaaaaccctcctcatttggaggaactaaaaaattgt |
33944689 |
T |
|
Q |
141 |
attggatgacggttttg |
157 |
Q |
|
|
|||||| || ||||||| |
|
|
T |
33944688 |
attggaggagggttttg |
33944672 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #6
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 34 - 157
Target Start/End: Original strand, 35283013 - 35283136
Alignment:
Q |
34 |
gaaggatcaagtgaaagaaatagagaatattggaaggggaaggctttgaggggttaatttgtcttcataatacaacactctgctcattt-ggggaactaa |
132 |
Q |
|
|
|||||| |||||| |||||||||||| ||||| ||| | || ||||| ||||||||||| |||||| |||| || || || ||||||| |||||||||| |
|
|
T |
35283013 |
gaaggagcaagtggaagaaatagagatcattgggaggaggag-ctttggggggttaatttttcttcaaaatataaaaccctcctcatttgggggaactaa |
35283111 |
T |
|
Q |
133 |
aaagttgtattggatgacggttttg |
157 |
Q |
|
|
||| |||||||||| || ||||||| |
|
|
T |
35283112 |
aaaattgtattggaggaaggttttg |
35283136 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #7
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 77 - 156
Target Start/End: Complemental strand, 53664712 - 53664632
Alignment:
Q |
77 |
ctttgaggggttaatttgtcttcataatacaacactctgctcatttgg-ggaactaaaaagttgtattggatgacggtttt |
156 |
Q |
|
|
|||||||||||||| || |||||||||||||| || || ||||||||| ||||||||||| |||||||||| || |||||| |
|
|
T |
53664712 |
ctttgaggggttaacttttcttcataatacaaaaccctcctcatttggaggaactaaaaaattgtattggaggagggtttt |
53664632 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #8
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 75 - 157
Target Start/End: Complemental strand, 33909064 - 33908981
Alignment:
Q |
75 |
ggctttgaggggttaatttgtcttcataatacaacactctgctcatttgggg-aactaaaaagttgtattggatgacggttttg |
157 |
Q |
|
|
||||||| ||| |||| || |||||||||||||| || || ||||||||||| |||||||||||||||||||| || ||||||| |
|
|
T |
33909064 |
ggctttgggggattaacttttcttcataatacaaaaccctcctcatttggggaaactaaaaagttgtattggaggagggttttg |
33908981 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #9
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 42 - 146
Target Start/End: Complemental strand, 25754248 - 25754145
Alignment:
Q |
42 |
aagtgaaagaaatagagaatattggaaggggaaggctttgaggggttaatttgtcttcataatacaacactctgctcatttgg-ggaactaaaaagttgt |
140 |
Q |
|
|
||||||||||||||||| ||| ||| || ||| |||||| |||||| | || |||||||||||||| || || ||||||||| ||||||||||| |||| |
|
|
T |
25754248 |
aagtgaaagaaatagaggataatgggagaggagggcttt--ggggttgacttttcttcataatacaaaaccctcctcatttggaggaactaaaaaattgt |
25754151 |
T |
|
Q |
141 |
attgga |
146 |
Q |
|
|
|||||| |
|
|
T |
25754150 |
attgga |
25754145 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #10
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 62 - 146
Target Start/End: Complemental strand, 40119012 - 40118927
Alignment:
Q |
62 |
attggaaggggaaggctttgaggggttaatttgtcttcataatacaacactctgctcattt-ggggaactaaaaagttgtattgga |
146 |
Q |
|
|
||||| |||||| ||||||| ||||||||||| ||||||| | |||| || || ||||||| ||||||||||||| |||||||||| |
|
|
T |
40119012 |
attgggaggggagggctttggggggttaatttttcttcattaaacaaaaccctcctcatttgggggaactaaaaaattgtattgga |
40118927 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #11
Raw Score: 37; E-Value: 0.000000000004
Query Start/End: Original strand, 70 - 173
Target Start/End: Original strand, 49183657 - 49183761
Alignment:
Q |
70 |
gggaaggctttgaggggttaatttgtcttcataatacaacactctgctcatttggggaactaaaaagttgtattggatgacggtttt-gtgggtttatat |
168 |
Q |
|
|
|||| ||||||| |||||||| || |||||||||||| | | || ||||||||| |||||||||| ||||||| || || |||||| | |||||||||| |
|
|
T |
49183657 |
gggagggctttggggggttaacttttcttcataatactaatccctcctcatttggagaactaaaaaattgtattagaggagggttttggagggtttatat |
49183756 |
T |
|
Q |
169 |
gaatt |
173 |
Q |
|
|
||||| |
|
|
T |
49183757 |
gaatt |
49183761 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #12
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 68 - 173
Target Start/End: Complemental strand, 1133046 - 1132940
Alignment:
Q |
68 |
aggggaaggctttgaggggttaatttgtcttcataatacaacactctgctcattt-ggggaactaaaaagttgtattggatgacggtttt-gtgggttta |
165 |
Q |
|
|
||||||||| |||| |||||| |||| ||||||||||||| ||||| ||||||| |||||||| |||| |||||||||| || |||||| | ||||||| |
|
|
T |
1133046 |
aggggaaggttttg-ggggttcattttacttcataatacaaaactctcctcattttggggaactcaaaaattgtattggaggagggttttggagggttta |
1132948 |
T |
|
Q |
166 |
tatgaatt |
173 |
Q |
|
|
||||||| |
|
|
T |
1132947 |
catgaatt |
1132940 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #13
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 48 - 146
Target Start/End: Complemental strand, 45571085 - 45570986
Alignment:
Q |
48 |
aagaaatagagaatattggaaggggaaggctttgaggggttaatttgtcttcataatacaacactctgctcattt-ggggaactaaaaagttgtattgga |
146 |
Q |
|
|
||||||||||| | | |||||||||| |||| || |||||| |||| ||||||||||| | || || ||||||| ||||||||||||| |||||||||| |
|
|
T |
45571085 |
aagaaatagaggaaaatggaaggggagggctatggggggttcatttttcttcataatattaaaccctcctcatttgggggaactaaaaaattgtattgga |
45570986 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #14
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 48 - 146
Target Start/End: Complemental strand, 50535244 - 50535145
Alignment:
Q |
48 |
aagaaatagagaatattggaaggggaaggctttgaggggttaatttgtcttcataatacaacactctgctcattt-ggggaactaaaaagttgtattgga |
146 |
Q |
|
|
||||||||||| | | || || || |||||||||||||||||| || ||||||||||| | || || ||||||| ||||||||||||| |||||||||| |
|
|
T |
50535244 |
aagaaatagaggaaaatgaaaaggaaaggctttgaggggttaactttacttcataatactaaaccctcctcatttaggggaactaaaaaattgtattgga |
50535145 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #15
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 42 - 157
Target Start/End: Complemental strand, 48909021 - 48908906
Alignment:
Q |
42 |
aagtgaaagaaatagagaatattggaaggggaaggctttgaggggttaatttgtcttcataatacaacactctgctcatttgg-ggaactaaaaagttgt |
140 |
Q |
|
|
||||| ||||||||||| | | ||| || ||||||||||| |||||||| || |||||||||||||| || || | |||||| ||||||||||| || | |
|
|
T |
48909021 |
aagtggaagaaatagaggaaaatgggagaggaaggctttg-ggggttaacttttcttcataatacaaaaccctcataatttggaggaactaaaaaattat |
48908923 |
T |
|
Q |
141 |
attggatgacggttttg |
157 |
Q |
|
|
|||||| || ||||||| |
|
|
T |
48908922 |
attggaggagggttttg |
48908906 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #16
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 84 - 146
Target Start/End: Original strand, 22225341 - 22225404
Alignment:
Q |
84 |
gggttaatttgtcttcataatacaacactctgctcattt-ggggaactaaaaagttgtattgga |
146 |
Q |
|
|
|||||||||| |||||||||||| | ||||| ||||||| ||||||||||||| || ||||||| |
|
|
T |
22225341 |
gggttaatttttcttcataatactaaactctcctcatttaggggaactaaaaaattatattgga |
22225404 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #17
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 95 - 157
Target Start/End: Original strand, 27197238 - 27197301
Alignment:
Q |
95 |
tcttcataatacaacactctgctcatttggggaact-aaaaagttgtattggatgacggttttg |
157 |
Q |
|
|
|||||||||||||| || || |||||||| |||||| ||||| ||||||||||||| ||||||| |
|
|
T |
27197238 |
tcttcataatacaaaaccctcctcatttgaggaactaaaaaaattgtattggatgagggttttg |
27197301 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #18
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 41 - 146
Target Start/End: Complemental strand, 37674289 - 37674183
Alignment:
Q |
41 |
caagtgaaagaaatagagaatattggaaggggaaggctttgaggggttaatttgtcttcataatacaacactctgctcatttgg-ggaactaaaaagttg |
139 |
Q |
|
|
|||||| |||||||| || | | ||| || ||| ||||||| |||||||| || ||||||| |||||| || || ||||||| | ||||||||||| ||| |
|
|
T |
37674289 |
caagtggaagaaataaaggaaaatgggagaggagggctttggggggttaacttttcttcatgatacaaaaccctcctcattttgaggaactaaaaaattg |
37674190 |
T |
|
Q |
140 |
tattgga |
146 |
Q |
|
|
||||||| |
|
|
T |
37674189 |
tattgga |
37674183 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 41 - 135
Target Start/End: Complemental strand, 49860658 - 49860565
Alignment:
Q |
41 |
caagtgaaagaaatagagaatattggaaggggaaggctttgaggggttaatttgtcttcataatacaacactctgctcatttggggaactaaaaa |
135 |
Q |
|
|
||||| ||||||| |||| ||||||| ||| || |||| | |||||| |||| | |||||||||||| | ||| |||||||||||||||||||| |
|
|
T |
49860658 |
caagtaaaagaaacagaggatattgggaggagagggctgttgggggttcattttt-ttcataatacaaaattctcctcatttggggaactaaaaa |
49860565 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 86 - 156
Target Start/End: Original strand, 51686484 - 51686554
Alignment:
Q |
86 |
gttaatttgtcttcataatacaacactctgctcatttggggaactaaaaagttgtattggatgacggtttt |
156 |
Q |
|
|
||||| || |||||||||||| | || | |||||||||||||||||||| |||||||||| || |||||| |
|
|
T |
51686484 |
gttaacttttcttcataatactaaacccccctcatttggggaactaaaaaattgtattggaggagggtttt |
51686554 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #21
Raw Score: 30; E-Value: 0.00000006
Query Start/End: Original strand, 70 - 146
Target Start/End: Complemental strand, 21777755 - 21777679
Alignment:
Q |
70 |
gggaaggctttgaggggttaatttgtcttcataatacaacactctgctcatttggg-gaactaaaaagttgtattgga |
146 |
Q |
|
|
|||||||||||| |||||| |||| |||||||||||||| ||||| ||||||||| ||| | |||| |||||||||| |
|
|
T |
21777755 |
gggaaggctttg-ggggttcatttttcttcataatacaaaactctcatcatttgggagaaatcaaaaattgtattgga |
21777679 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #22
Raw Score: 30; E-Value: 0.00000006
Query Start/End: Original strand, 116 - 157
Target Start/End: Original strand, 48444514 - 48444555
Alignment:
Q |
116 |
ctcatttggggaactaaaaagttgtattggatgacggttttg |
157 |
Q |
|
|
|||||||||||| ||||||| ||||||||||||| ||||||| |
|
|
T |
48444514 |
ctcatttggggatctaaaaaattgtattggatgagggttttg |
48444555 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #23
Raw Score: 30; E-Value: 0.00000006
Query Start/End: Original strand, 84 - 156
Target Start/End: Original strand, 50948181 - 50948254
Alignment:
Q |
84 |
gggttaatttgtcttcataatacaacactctgctcatttgg-ggaactaaaaagttgtattggatgacggtttt |
156 |
Q |
|
|
||||||| || |||||||||||||| || || |||| |||| ||||||||||| |||||||||| || |||||| |
|
|
T |
50948181 |
gggttaacttttcttcataatacaaaaccctcctcagttggaggaactaaaaaattgtattggaggagggtttt |
50948254 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #24
Raw Score: 30; E-Value: 0.00000006
Query Start/End: Original strand, 90 - 147
Target Start/End: Complemental strand, 54089553 - 54089496
Alignment:
Q |
90 |
atttgtcttcataatacaacactctgctcatttggggaactaaaaagttgtattggat |
147 |
Q |
|
|
|||| |||| ||||||||| ||||| |||||||| | ||||||||| ||||||||||| |
|
|
T |
54089553 |
atttttctttataatacaaaactcttctcatttgagaaactaaaaaattgtattggat |
54089496 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #25
Raw Score: 28; E-Value: 0.0000009
Query Start/End: Original strand, 83 - 126
Target Start/End: Complemental strand, 517738 - 517695
Alignment:
Q |
83 |
ggggttaatttgtcttcataatacaacactctgctcatttgggg |
126 |
Q |
|
|
||||||||||| |||||||||||||| || || ||||||||||| |
|
|
T |
517738 |
ggggttaatttttcttcataatacaaaaccctcctcatttgggg |
517695 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #26
Raw Score: 28; E-Value: 0.0000009
Query Start/End: Original strand, 83 - 157
Target Start/End: Complemental strand, 1340005 - 1339930
Alignment:
Q |
83 |
ggggttaatttgtcttcataatacaacactctgctcatttg-gggaactaaaaagttgtattggatgacggttttg |
157 |
Q |
|
|
||||||||||| ||||||||||||| ||||| ||||||| |||||| |||| |||||||||| || ||||||| |
|
|
T |
1340005 |
ggggttaatttttcttcataatacataactctcatcatttgaaggaactcaaaaattgtattggaagaaggttttg |
1339930 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #27
Raw Score: 28; E-Value: 0.0000009
Query Start/End: Original strand, 48 - 146
Target Start/End: Original strand, 11500045 - 11500142
Alignment:
Q |
48 |
aagaaatagagaatattggaaggggaaggctttgaggggttaatttgtcttcataatacaacactctgctcatttggg-gaactaaaaagttgtattgga |
146 |
Q |
|
|
|||||||||| |||||| ||||||||| |||| ||||||| ||| ||||||||||| || || || |||||||||| ||||||||| |||||||||| |
|
|
T |
11500045 |
aagaaatagatgatattgaaaggggaagattttg-ggggttatttt-tcttcataatagaaaaccctcctcatttgggataactaaaaaattgtattgga |
11500142 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #28
Raw Score: 28; E-Value: 0.0000009
Query Start/End: Original strand, 41 - 146
Target Start/End: Complemental strand, 15499446 - 15499342
Alignment:
Q |
41 |
caagtgaaagaaatagagaatattggaaggggaaggctttgaggggttaatttgtcttcataatacaacactctgctcatttggg-gaactaaaaagttg |
139 |
Q |
|
|
|||||| |||||||||| | |||| |||||||||||||| |||||| | || |||||||||||||| | | |||||||||| ||||| |||| ||| |
|
|
T |
15499446 |
caagtggaagaaatagattacattgaaaggggaaggcttt--ggggttcacttttcttcataatacaaaatcttcctcatttgggagaactcaaaaattg |
15499349 |
T |
|
Q |
140 |
tattgga |
146 |
Q |
|
|
||||||| |
|
|
T |
15499348 |
tattgga |
15499342 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #29
Raw Score: 28; E-Value: 0.0000009
Query Start/End: Original strand, 33 - 108
Target Start/End: Complemental strand, 49855964 - 49855890
Alignment:
Q |
33 |
tgaaggatcaagtgaaagaaatagagaatattggaaggggaaggctttgaggggttaatttgtcttcataatacaa |
108 |
Q |
|
|
||||||| ||||||||||||||||| | |||| || |||||| |||| |||||| |||| |||||||||||||| |
|
|
T |
49855964 |
tgaaggagcaagtgaaagaaatagatgacattgagagaggaaggttttg-ggggttcatttttcttcataatacaa |
49855890 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #30
Raw Score: 28; E-Value: 0.0000009
Query Start/End: Original strand, 90 - 157
Target Start/End: Complemental strand, 50345746 - 50345679
Alignment:
Q |
90 |
atttgtcttcataatacaacactctgctcatttggggaactaaaaagttgtattggatgacggttttg |
157 |
Q |
|
|
|||| |||||| |||| || || || ||| |||||||||||||| | ||||||||||||| ||||||| |
|
|
T |
50345746 |
atttttcttcaaaatataaaacactcctcgtttggggaactaaagaattgtattggatgagggttttg |
50345679 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0031 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold0031
Description:
Target: scaffold0031; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 78 - 157
Target Start/End: Complemental strand, 93618 - 93538
Alignment:
Q |
78 |
tttgaggggttaatttgtcttcataatacaacactctgctcatttgg-ggaactaaaaagttgtattggatgacggttttg |
157 |
Q |
|
|
|||| |||||||| || |||||||||||||| ||||| ||||||||| ||||||||||| |||||||||| || ||||||| |
|
|
T |
93618 |
tttggggggttaacttttcttcataatacaaaactctcctcatttggaggaactaaaaaattgtattggaggagggttttg |
93538 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0128 (Bit Score: 35; Significance: 0.00000000006; HSPs: 1)
Name: scaffold0128
Description:
Target: scaffold0128; HSP #1
Raw Score: 35; E-Value: 0.00000000006
Query Start/End: Original strand, 42 - 143
Target Start/End: Original strand, 26312 - 26414
Alignment:
Q |
42 |
aagtgaaagaaatagagaatattggaaggggaaggctttgaggggttaatttgtcttcataatacaacactctgctcatttgg-ggaactaaaaagttgt |
140 |
Q |
|
|
||||| ||||||||||| | | ||| || ||| ||||||| |||| ||| || |||||||||||||| || || ||||||||| ||||||||||| |||| |
|
|
T |
26312 |
aagtggaagaaatagaggaaaatgggagaggagggctttggggggataacttttcttcataatacaaaaccctcctcatttggaggaactaaaaaattgt |
26411 |
T |
|
Q |
141 |
att |
143 |
Q |
|
|
||| |
|
|
T |
26412 |
att |
26414 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0248 (Bit Score: 34; Significance: 0.0000000002; HSPs: 1)
Name: scaffold0248
Description:
Target: scaffold0248; HSP #1
Raw Score: 34; E-Value: 0.0000000002
Query Start/End: Original strand, 41 - 157
Target Start/End: Complemental strand, 344 - 228
Alignment:
Q |
41 |
caagtgaaagaaatagagaatattggaaggggaaggctttgaggggttaatttgtcttcataatacaacactctgctcatttgg-ggaactaaaaagttg |
139 |
Q |
|
|
|||||| ||||||||||| | | ||| || ||| |||||| |||||||| || |||||||||||||| || || || |||||| ||||||||||| ||| |
|
|
T |
344 |
caagtggaagaaatagaggaaaatgggagaggagagctttg-ggggttaacttttcttcataatacaaaaccctccttatttggaggaactaaaaaattg |
246 |
T |
|
Q |
140 |
tattggatgacggttttg |
157 |
Q |
|
|
||||||| || ||||||| |
|
|
T |
245 |
tattggaggagggttttg |
228 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0051 (Bit Score: 34; Significance: 0.0000000002; HSPs: 4)
Name: scaffold0051
Description:
Target: scaffold0051; HSP #1
Raw Score: 34; E-Value: 0.0000000002
Query Start/End: Original strand, 84 - 161
Target Start/End: Complemental strand, 796 - 719
Alignment:
Q |
84 |
gggttaatttgtcttcataatacaacactctgctcatttggggaactaaaaagttgtattggatgacggttttgtggg |
161 |
Q |
|
|
||||||| || |||||||||||||| || || |||||||| |||||||||| |||| ||||| || ||||||||||| |
|
|
T |
796 |
gggttaacttttcttcataatacaaaaccctcctcatttgaggaactaaaacattgtcttggaggatggttttgtggg |
719 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0051; HSP #2
Raw Score: 34; E-Value: 0.0000000002
Query Start/End: Original strand, 84 - 161
Target Start/End: Complemental strand, 3673 - 3596
Alignment:
Q |
84 |
gggttaatttgtcttcataatacaacactctgctcatttggggaactaaaaagttgtattggatgacggttttgtggg |
161 |
Q |
|
|
||||||| || |||||||||||||| || || |||||||| |||||||||| |||| ||||| || ||||||||||| |
|
|
T |
3673 |
gggttaacttttcttcataatacaaaaccctcctcatttgaggaactaaaacattgtcttggaggatggttttgtggg |
3596 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0051; HSP #3
Raw Score: 30; E-Value: 0.00000006
Query Start/End: Original strand, 85 - 157
Target Start/End: Complemental strand, 6862 - 6789
Alignment:
Q |
85 |
ggttaatttgtcttcataatacaacactctgctcatttgg-ggaactaaaaagttgtattggatgacggttttg |
157 |
Q |
|
|
|||||| || |||||||||||||| || || ||||||||| |||||||||| |||||||||| || ||||||| |
|
|
T |
6862 |
ggttaacttttcttcataatacaaaaccctcctcatttggaggaactaaaacattgtattggaggagggttttg |
6789 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0051; HSP #4
Raw Score: 30; E-Value: 0.00000006
Query Start/End: Original strand, 85 - 157
Target Start/End: Complemental strand, 7845 - 7772
Alignment:
Q |
85 |
ggttaatttgtcttcataatacaacactctgctcatttgg-ggaactaaaaagttgtattggatgacggttttg |
157 |
Q |
|
|
|||||| || |||||||||||||| || || ||||||||| |||||||||| |||||||||| || ||||||| |
|
|
T |
7845 |
ggttaacttttcttcataatacaaaaccctcctcatttggaggaactaaaacattgtattggaggagggttttg |
7772 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0274 (Bit Score: 32; Significance: 0.000000004; HSPs: 1)
Name: scaffold0274
Description:
Target: scaffold0274; HSP #1
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 78 - 157
Target Start/End: Original strand, 15887 - 15966
Alignment:
Q |
78 |
tttgaggggttaatttgtcttcataatacaacactctgctcatttggggaactaaaaagttgtattggatgacggttttg |
157 |
Q |
|
|
||||| |||||||||| |||||||||| || | ||| ||||||||||||| | |||| |||||||||| || ||||||| |
|
|
T |
15887 |
tttgaagggttaatttttcttcataatgaaaaaatctcctcatttggggaatttaaaaattgtattggaggagggttttg |
15966 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0136 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0136
Description:
Target: scaffold0136; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 41 - 146
Target Start/End: Complemental strand, 2171 - 2066
Alignment:
Q |
41 |
caagtgaaagaaatagagaatattggaaggggaaggctttgaggggttaatttgtcttcataatacaacactctgctcatttgg-ggaactaaaaagttg |
139 |
Q |
|
|
|||||| |||||||||| | | ||| || ||| ||||||| |||||||| || |||||||||||||| || || ||||||||| |||||| |||| ||| |
|
|
T |
2171 |
caagtggaagaaatagaagaaaatgggagaggagggctttg-ggggttaacttttcttcataatacaaaaccctcctcatttggaggaactgaaaaattg |
2073 |
T |
|
Q |
140 |
tattgga |
146 |
Q |
|
|
||||||| |
|
|
T |
2072 |
tattgga |
2066 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0053 (Bit Score: 29; Significance: 0.0000002; HSPs: 1)
Name: scaffold0053
Description:
Target: scaffold0053; HSP #1
Raw Score: 29; E-Value: 0.0000002
Query Start/End: Original strand, 75 - 146
Target Start/End: Original strand, 29211 - 29282
Alignment:
Q |
75 |
ggctttgaggggttaatttgtcttcataatacaacactctgctcatttgg-ggaactaaaaagttgtattgga |
146 |
Q |
|
|
||||||||||| |||| || |||||||||||||| || || |||||||| ||||||||||| |||||||||| |
|
|
T |
29211 |
ggctttgaggg-ttaacttttcttcataatacaaaaccctcatcatttggaggaactaaaaaattgtattgga |
29282 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
© Oklahoma State University
This website was viewed 544 times since January 2019
Visitors: 5619