View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: F9315-LTR4-TNT-insertion-1 (Length: 153)

Name: F9315-LTR4-TNT-insertion-1
Description: F9315-LTR4
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] F9315-LTR4-TNT-insertion-1
F9315-LTR4-TNT-insertion-1
[»] chr2 (16 HSPs)
chr2 (8-143)||(22131187-22131322)
chr2 (77-133)||(18570973-18571029)
chr2 (75-123)||(26787738-26787786)
chr2 (77-120)||(43586007-43586050)
chr2 (76-123)||(44605140-44605187)
chr2 (77-139)||(37497115-37497177)
chr2 (75-112)||(14373427-14373464)
chr2 (76-133)||(16630796-16630853)
chr2 (77-122)||(45000848-45000893)
chr2 (77-141)||(18622408-18622472)
chr2 (77-141)||(31026688-31026752)
chr2 (87-139)||(32843708-32843760)
chr2 (59-95)||(34006854-34006890)
chr2 (75-123)||(45166418-45166466)
chr2 (80-135)||(896210-896265)
chr2 (81-144)||(10535765-10535828)
[»] chr1 (11 HSPs)
chr1 (77-139)||(19637763-19637825)
chr1 (74-122)||(14332420-14332468)
chr1 (80-136)||(26462650-26462706)
chr1 (77-133)||(31667426-31667482)
chr1 (75-134)||(30847720-30847779)
chr1 (76-144)||(13709176-13709244)
chr1 (77-136)||(7988453-7988512)
chr1 (75-134)||(11412768-11412827)
chr1 (77-120)||(40176617-40176660)
chr1 (92-135)||(40747790-40747833)
chr1 (82-129)||(43609825-43609872)
[»] chr4 (16 HSPs)
chr4 (77-139)||(56049872-56049933)
chr4 (77-136)||(3568852-3568911)
chr4 (75-134)||(18513241-18513300)
chr4 (90-136)||(5654606-5654652)
chr4 (75-120)||(37496718-37496763)
chr4 (90-136)||(10546146-10546192)
chr4 (80-134)||(14465299-14465353)
chr4 (81-122)||(683064-683105)
chr4 (90-139)||(31243563-31243612)
chr4 (86-135)||(51673453-51673502)
chr4 (82-126)||(9988706-9988750)
chr4 (75-123)||(11110214-11110262)
chr4 (77-120)||(13307891-13307934)
chr4 (75-118)||(40224498-40224541)
chr4 (75-134)||(43299971-43300030)
chr4 (75-134)||(43300616-43300675)
[»] chr3 (12 HSPs)
chr3 (83-136)||(19323456-19323509)
chr3 (77-131)||(20691322-20691376)
chr3 (77-130)||(27513664-27513718)
chr3 (77-133)||(44427841-44427898)
chr3 (75-135)||(8039205-8039265)
chr3 (82-141)||(9210832-9210891)
chr3 (77-128)||(40150573-40150624)
chr3 (75-134)||(47542535-47542594)
chr3 (75-133)||(18268005-18268063)
chr3 (75-135)||(1502573-1502633)
chr3 (75-123)||(23271994-23272042)
chr3 (91-139)||(34189422-34189470)
[»] chr6 (18 HSPs)
chr6 (79-123)||(10157995-10158039)
chr6 (76-126)||(10335377-10335427)
chr6 (93-142)||(2140499-2140548)
chr6 (83-126)||(3151390-3151433)
chr6 (77-120)||(6751884-6751927)
chr6 (81-136)||(10760848-10760902)
chr6 (77-120)||(19369831-19369874)
chr6 (53-139)||(122085-122171)
chr6 (77-123)||(9024178-9024224)
chr6 (77-123)||(29670904-29670950)
chr6 (81-142)||(5579646-5579707)
chr6 (80-129)||(27661741-27661790)
chr6 (75-128)||(29711268-29711321)
chr6 (78-134)||(19343521-19343577)
chr6 (77-133)||(34057955-34058011)
chr6 (76-123)||(663785-663832)
chr6 (77-136)||(4859115-4859174)
chr6 (52-99)||(6650081-6650128)
[»] chr5 (11 HSPs)
chr5 (75-139)||(43208274-43208338)
chr5 (83-126)||(7512207-7512250)
chr5 (77-136)||(28296326-28296385)
chr5 (77-136)||(30080503-30080562)
chr5 (81-118)||(10009842-10009879)
chr5 (77-122)||(32444778-32444823)
chr5 (75-136)||(38749563-38749624)
chr5 (90-126)||(7512451-7512487)
chr5 (76-128)||(19737483-19737535)
chr5 (77-120)||(10010568-10010611)
chr5 (75-130)||(10948658-10948713)
[»] chr8 (12 HSPs)
chr8 (77-136)||(31548295-31548354)
chr8 (54-120)||(42874536-42874601)
chr8 (77-134)||(1433345-1433402)
chr8 (82-139)||(2447231-2447286)
chr8 (85-127)||(16464137-16464179)
chr8 (77-139)||(32691738-32691800)
chr8 (78-135)||(31236580-31236637)
chr8 (77-126)||(31681832-31681881)
chr8 (78-130)||(3508056-3508108)
chr8 (77-136)||(5307059-5307117)
chr8 (81-120)||(31119101-31119140)
chr8 (92-139)||(34201063-34201110)
[»] chr7 (17 HSPs)
chr7 (79-134)||(38134410-38134465)
chr7 (75-133)||(36314627-36314685)
chr7 (83-129)||(44172898-44172944)
chr7 (77-138)||(2525846-2525907)
chr7 (90-139)||(23930214-23930263)
chr7 (77-126)||(37775990-37776039)
chr7 (77-139)||(36013800-36013863)
chr7 (77-139)||(1885568-1885630)
chr7 (78-123)||(16827651-16827696)
chr7 (84-120)||(2143862-2143898)
chr7 (77-125)||(10893871-10893919)
chr7 (77-129)||(20427637-20427689)
chr7 (77-120)||(5937423-5937466)
chr7 (77-120)||(9050135-9050178)
chr7 (76-123)||(23165267-23165314)
chr7 (77-128)||(31808511-31808562)
chr7 (79-126)||(43160492-43160539)
[»] scaffold0571 (1 HSPs)
scaffold0571 (87-131)||(7693-7737)
[»] scaffold0314 (1 HSPs)
scaffold0314 (77-120)||(8962-9005)


Alignment Details
Target: chr2 (Bit Score: 136; Significance: 3e-71; HSPs: 16)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 136; E-Value: 3e-71
Query Start/End: Original strand, 8 - 143
Target Start/End: Original strand, 22131187 - 22131322
Alignment:
Q  8 atataagctctgtagcaccaatatttctgattgaagttgtatctggtgtccgacatgtgttagagtgcaacaccgacacatgtgattacattgaacaatg 107  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  22131187 atataagctctgtagcaccaatatttctgattgaagttgtatctggtgtccgacatgtgttagagtgcaacaccgacacatgtgattacattgaacaatg 22131286  T
Q  108 tcattttctcaaattactatcagtgtcgatgtatta 143  Q
    ||||||||||||||||||||||||||||||||||||    
T  22131287 tcattttctcaaattactatcagtgtcgatgtatta 22131322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 33; E-Value: 0.0000000008
Query Start/End: Original strand, 77 - 133
Target Start/End: Complemental strand, 18571029 - 18570973
Alignment:
Q  77 acaccgacacatgtgattacattgaacaatgtcattttctcaaattactatcagtgt 133  Q
    |||| ||||||| |||||||||||||  ||||||||||||||||||| |||| ||||    
T  18571029 acactgacacatatgattacattgaattatgtcattttctcaaattattatcggtgt 18570973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 33; E-Value: 0.0000000008
Query Start/End: Original strand, 75 - 123
Target Start/End: Original strand, 26787738 - 26787786
Alignment:
Q  75 caacaccgacacatgtgattacattgaacaatgtcattttctcaaatta 123  Q
    ||||| ||||||||||||||||||| || |||||||||||| |||||||    
T  26787738 caacaacgacacatgtgattacattcaataatgtcattttcgcaaatta 26787786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 32; E-Value: 0.000000003
Query Start/End: Original strand, 77 - 120
Target Start/End: Original strand, 43586007 - 43586050
Alignment:
Q  77 acaccgacacatgtgattacattgaacaatgtcattttctcaaa 120  Q
    |||||||||| |||||||||||||||  ||||||||||||||||    
T  43586007 acaccgacacttgtgattacattgaattatgtcattttctcaaa 43586050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 32; E-Value: 0.000000003
Query Start/End: Original strand, 76 - 123
Target Start/End: Original strand, 44605140 - 44605187
Alignment:
Q  76 aacaccgacacatgtgattacattgaacaatgtcattttctcaaatta 123  Q
    ||||||||||||||| |||||||||||  |||| ||||||||||||||    
T  44605140 aacaccgacacatgtaattacattgaattatgttattttctcaaatta 44605187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 31; E-Value: 0.00000001
Query Start/End: Original strand, 77 - 139
Target Start/End: Complemental strand, 37497177 - 37497115
Alignment:
Q  77 acaccgacacatgtgattacattgaacaatgtcattttctcaaattactatcagtgtcgatgt 139  Q
    ||||||||| || | |||||||||||   || ||||||||||||||| |||||||||||||||    
T  37497177 acaccgacagatattattacattgaattgtggcattttctcaaattattatcagtgtcgatgt 37497115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 30; E-Value: 0.00000005
Query Start/End: Original strand, 75 - 112
Target Start/End: Original strand, 14373427 - 14373464
Alignment:
Q  75 caacaccgacacatgtgattacattgaacaatgtcatt 112  Q
    ||||||||||||||||||||||||||||  ||||||||    
T  14373427 caacaccgacacatgtgattacattgaattatgtcatt 14373464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 30; E-Value: 0.00000005
Query Start/End: Original strand, 76 - 133
Target Start/End: Complemental strand, 16630853 - 16630796
Alignment:
Q  76 aacaccgacacatgtgattacattgaacaatgtcattttctcaaattactatcagtgt 133  Q
    ||||| |||||||||||||| ||||||  |||||||||||| |||||| |||| ||||    
T  16630853 aacactgacacatgtgattaaattgaattatgtcattttcttaaattattatcggtgt 16630796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 30; E-Value: 0.00000005
Query Start/End: Original strand, 77 - 122
Target Start/End: Original strand, 45000848 - 45000893
Alignment:
Q  77 acaccgacacatgtgattacattgaacaatgtcattttctcaaatt 122  Q
    |||||||||||| |||||||||||||   |||||||||||||||||    
T  45000848 acaccgacacatatgattacattgaattgtgtcattttctcaaatt 45000893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 29; E-Value: 0.0000002
Query Start/End: Original strand, 77 - 141
Target Start/End: Complemental strand, 18622472 - 18622408
Alignment:
Q  77 acaccgacacatgtgattacattgaacaatgtcattttctcaaattactatcagtgtcgatgtat 141  Q
    |||||||||||||||||| |||| ||  |||||||||||| |||||| ||||  ||||| |||||    
T  18622472 acaccgacacatgtgattgcatttaattatgtcattttcttaaattattatcgatgtcggtgtat 18622408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 29; E-Value: 0.0000002
Query Start/End: Original strand, 77 - 141
Target Start/End: Complemental strand, 31026752 - 31026688
Alignment:
Q  77 acaccgacacatgtgattacattgaacaatgtcattttctcaaattactatcagtgtcgatgtat 141  Q
    ||||||||| || |||||||||||||  |||||||||||| |||||| |||| || |||| ||||    
T  31026752 acaccgacatatatgattacattgaattatgtcattttcttaaattattatcggtctcgacgtat 31026688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 29; E-Value: 0.0000002
Query Start/End: Original strand, 87 - 139
Target Start/End: Complemental strand, 32843760 - 32843708
Alignment:
Q  87 atgtgattacattgaacaatgtcattttctcaaattactatcagtgtcgatgt 139  Q
    ||||||||||||| ||  |||||||||||||| ||||||| |||| |||||||    
T  32843760 atgtgattacattcaattatgtcattttctcatattactaccagtatcgatgt 32843708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 29; E-Value: 0.0000002
Query Start/End: Original strand, 59 - 95
Target Start/End: Complemental strand, 34006890 - 34006854
Alignment:
Q  59 gacatgtgttagagtgcaacaccgacacatgtgatta 95  Q
    |||||||||||| || |||||||||||||||||||||    
T  34006890 gacatgtgttagtgtccaacaccgacacatgtgatta 34006854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 29; E-Value: 0.0000002
Query Start/End: Original strand, 75 - 123
Target Start/End: Original strand, 45166418 - 45166466
Alignment:
Q  75 caacaccgacacatgtgattacattgaacaatgtcattttctcaaatta 123  Q
    |||||||||||||| || ||||||||||| ||||||||| || ||||||    
T  45166418 caacaccgacacatatggttacattgaactatgtcatttgctaaaatta 45166466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 28; E-Value: 0.0000008
Query Start/End: Original strand, 80 - 135
Target Start/End: Complemental strand, 896265 - 896210
Alignment:
Q  80 ccgacacatgtgattacattgaacaatgtcattttctcaaattactatcagtgtcg 135  Q
    ||||||||| |||||||||||||  |||| ||||||||||| || || ||||||||    
T  896265 ccgacacatatgattacattgaaatatgtgattttctcaaactattagcagtgtcg 896210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 28; E-Value: 0.0000008
Query Start/End: Original strand, 81 - 144
Target Start/End: Original strand, 10535765 - 10535828
Alignment:
Q  81 cgacacatgtgattacattgaacaatgtcattttctcaaattactatcagtgtcgatgtattag 144  Q
    |||||| | |||||||| ||||  ||||||||||||||||||| |||| ||||||  |||||||    
T  10535765 cgacacttatgattacactgaattatgtcattttctcaaattattatcggtgtcggcgtattag 10535828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 43; Significance: 9e-16; HSPs: 11)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 43; E-Value: 9e-16
Query Start/End: Original strand, 77 - 139
Target Start/End: Complemental strand, 19637825 - 19637763
Alignment:
Q  77 acaccgacacatgtgattacattgaacaatgtcattttctcaaattactatcagtgtcgatgt 139  Q
    |||||||||||| ||||||||||||| ||||||||||||| |||||| |||| ||||||||||    
T  19637825 acaccgacacatatgattacattgaataatgtcattttcttaaattattatcggtgtcgatgt 19637763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 37; E-Value: 0.000000000003
Query Start/End: Original strand, 74 - 122
Target Start/End: Complemental strand, 14332468 - 14332420
Alignment:
Q  74 gcaacaccgacacatgtgattacattgaacaatgtcattttctcaaatt 122  Q
    |||||||||||| ||||||||||||||||  ||||||||||||||||||    
T  14332468 gcaacaccgacatatgtgattacattgaattatgtcattttctcaaatt 14332420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 33; E-Value: 0.0000000008
Query Start/End: Original strand, 80 - 136
Target Start/End: Original strand, 26462650 - 26462706
Alignment:
Q  80 ccgacacatgtgattacattgaacaatgtcattttctcaaattactatcagtgtcga 136  Q
    |||||||||||||||||||| ||  || ||||||||| |||||| ||||||||||||    
T  26462650 ccgacacatgtgattacattcaattatttcattttcttaaattattatcagtgtcga 26462706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 33; E-Value: 0.0000000008
Query Start/End: Original strand, 77 - 133
Target Start/End: Complemental strand, 31667482 - 31667426
Alignment:
Q  77 acaccgacacatgtgattacattgaacaatgtcattttctcaaattactatcagtgt 133  Q
    ||||||||||||||||||||||| ||  |||||||||||| |||||| || ||||||    
T  31667482 acaccgacacatgtgattacatttaattatgtcattttctaaaattattaccagtgt 31667426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 32; E-Value: 0.000000003
Query Start/End: Original strand, 75 - 134
Target Start/End: Original strand, 30847720 - 30847779
Alignment:
Q  75 caacaccgacacatgtgattacattgaacaatgtcattttctcaaattactatcagtgtc 134  Q
    |||||| ||||||| |||||||||||||  |||||||||| |||||||| || |||||||    
T  30847720 caacactgacacatatgattacattgaattatgtcattttttcaaattattagcagtgtc 30847779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 29; E-Value: 0.0000002
Query Start/End: Original strand, 76 - 144
Target Start/End: Complemental strand, 13709244 - 13709176
Alignment:
Q  76 aacaccgacacatgtgattacattgaacaatgtcattttctcaaattactatcagtgtcgatgtattag 144  Q
    ||||| ||||||| |||||||||| ||   ||||||||||| |||| |||||||||||| |||| ||||    
T  13709244 aacactgacacatctgattacattcaattttgtcattttcttaaatcactatcagtgtcaatgtgttag 13709176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 28; E-Value: 0.0000008
Query Start/End: Original strand, 77 - 136
Target Start/End: Original strand, 7988453 - 7988512
Alignment:
Q  77 acaccgacacatgtgattacattgaacaatgtcattttctcaaattactatcagtgtcga 136  Q
    ||||| |||| | |||||||||||||  |||||| ||||| |||||| ||||||||||||    
T  7988453 acaccaacacttatgattacattgaattatgtcactttcttaaattattatcagtgtcga 7988512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 28; E-Value: 0.0000008
Query Start/End: Original strand, 75 - 134
Target Start/End: Original strand, 11412768 - 11412827
Alignment:
Q  75 caacaccgacacatgtgattacattgaacaatgtcattttctcaaattactatcagtgtc 134  Q
    |||||||||||| | |||| ||||||||  |||||||||||||| |||| |||| |||||    
T  11412768 caacaccgacacctatgatcacattgaattatgtcattttctcatattattatcggtgtc 11412827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 28; E-Value: 0.0000008
Query Start/End: Original strand, 77 - 120
Target Start/End: Complemental strand, 40176660 - 40176617
Alignment:
Q  77 acaccgacacatgtgattacattgaacaatgtcattttctcaaa 120  Q
    |||| |||||||||||||||||||||  | ||||||||||||||    
T  40176660 acactgacacatgtgattacattgaatgaagtcattttctcaaa 40176617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 28; E-Value: 0.0000008
Query Start/End: Original strand, 92 - 135
Target Start/End: Original strand, 40747790 - 40747833
Alignment:
Q  92 attacattgaacaatgtcattttctcaaattactatcagtgtcg 135  Q
    |||||||||||  ||||||||||||||||||| |||| ||||||    
T  40747790 attacattgaattatgtcattttctcaaattattatccgtgtcg 40747833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 28; E-Value: 0.0000008
Query Start/End: Original strand, 82 - 129
Target Start/End: Original strand, 43609825 - 43609872
Alignment:
Q  82 gacacatgtgattacattgaacaatgtcattttctcaaattactatca 129  Q
    |||||||||||||||||| ||  |||| |||||||||||||| |||||    
T  43609825 gacacatgtgattacattcaattatgttattttctcaaattattatca 43609872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 39; Significance: 0.0000000000002; HSPs: 16)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 39; E-Value: 0.0000000000002
Query Start/End: Original strand, 77 - 139
Target Start/End: Complemental strand, 56049933 - 56049872
Alignment:
Q  77 acaccgacacatgtgattacattgaacaatgtcattttctcaaattactatcagtgtcgatgt 139  Q
    |||||||||||| |||||||||||||| |||||| |||||||||||| |||| ||||||||||    
T  56049933 acaccgacacatatgattacattgaactatgtca-tttctcaaattattatcggtgtcgatgt 56049872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 36; E-Value: 0.00000000001
Query Start/End: Original strand, 77 - 136
Target Start/End: Original strand, 3568852 - 3568911
Alignment:
Q  77 acaccgacacatgtgattacattgaacaatgtcattttctcaaattactatcagtgtcga 136  Q
    |||||||||||| |||||  ||||||| ||||||||||||||||||||| || |||||||    
T  3568852 acaccgacacatatgatttaattgaactatgtcattttctcaaattactttcggtgtcga 3568911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 36; E-Value: 0.00000000001
Query Start/End: Original strand, 75 - 134
Target Start/End: Original strand, 18513241 - 18513300
Alignment:
Q  75 caacaccgacacatgtgattacattgaacaatgtcattttctcaaattactatcagtgtc 134  Q
    |||||| ||||||| |||||||||||||  ||||||||||||||||||| |||| |||||    
T  18513241 caacactgacacatatgattacattgaattatgtcattttctcaaattattatcggtgtc 18513300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 35; E-Value: 0.00000000005
Query Start/End: Original strand, 90 - 136
Target Start/End: Original strand, 5654606 - 5654652
Alignment:
Q  90 tgattacattgaacaatgtcattttctcaaattactatcagtgtcga 136  Q
    |||||||||||||  ||||||||||||||||||| ||||||||||||    
T  5654606 tgattacattgaattatgtcattttctcaaattattatcagtgtcga 5654652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 34; E-Value: 0.0000000002
Query Start/End: Original strand, 75 - 120
Target Start/End: Complemental strand, 37496763 - 37496718
Alignment:
Q  75 caacaccgacacatgtgattacattgaacaatgtcattttctcaaa 120  Q
    |||||||||||| |||||||||||||||  ||||||||||||||||    
T  37496763 caacaccgacacttgtgattacattgaattatgtcattttctcaaa 37496718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 31; E-Value: 0.00000001
Query Start/End: Original strand, 90 - 136
Target Start/End: Complemental strand, 10546192 - 10546146
Alignment:
Q  90 tgattacattgaacaatgtcattttctcaaattactatcagtgtcga 136  Q
    |||||||||||||  ||||||||||||||||||| ||||| ||||||    
T  10546192 tgattacattgaattatgtcattttctcaaattattatcattgtcga 10546146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 31; E-Value: 0.00000001
Query Start/End: Original strand, 80 - 134
Target Start/End: Original strand, 14465299 - 14465353
Alignment:
Q  80 ccgacacatgtgattacattgaacaatgtcattttctcaaattactatcagtgtc 134  Q
    ||||||||| |||||| ||||||  ||||||||||||||||||| |||| |||||    
T  14465299 ccgacacatatgattaaattgaattatgtcattttctcaaattattatcggtgtc 14465353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 30; E-Value: 0.00000005
Query Start/End: Original strand, 81 - 122
Target Start/End: Complemental strand, 683105 - 683064
Alignment:
Q  81 cgacacatgtgattacattgaacaatgtcattttctcaaatt 122  Q
    ||||||||||||||||||| ||  ||||||||||||||||||    
T  683105 cgacacatgtgattacattcaattatgtcattttctcaaatt 683064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 30; E-Value: 0.00000005
Query Start/End: Original strand, 90 - 139
Target Start/End: Original strand, 31243563 - 31243612
Alignment:
Q  90 tgattacattgaacaatgtcattttctcaaattactatcagtgtcgatgt 139  Q
    |||||||| ||||  ||||||||||||||||||| ||| |||||||||||    
T  31243563 tgattacactgaattatgtcattttctcaaattattataagtgtcgatgt 31243612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 30; E-Value: 0.00000005
Query Start/End: Original strand, 86 - 135
Target Start/End: Original strand, 51673453 - 51673502
Alignment:
Q  86 catgtgattacattgaacaatgtcattttctcaaattactatcagtgtcg 135  Q
    |||||||||||| ||||  ||||||||||||| ||||| |||||||||||    
T  51673453 catgtgattacaatgaattatgtcattttctccaattattatcagtgtcg 51673502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 29; E-Value: 0.0000002
Query Start/End: Original strand, 82 - 126
Target Start/End: Original strand, 9988706 - 9988750
Alignment:
Q  82 gacacatgtgattacattgaacaatgtcattttctcaaattacta 126  Q
    |||||||||||||||||| ||  ||||||||||||||||| ||||    
T  9988706 gacacatgtgattacattcaattatgtcattttctcaaataacta 9988750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 29; E-Value: 0.0000002
Query Start/End: Original strand, 75 - 123
Target Start/End: Complemental strand, 11110262 - 11110214
Alignment:
Q  75 caacaccgacacatgtgattacattgaacaatgtcattttctcaaatta 123  Q
    ||||| |||||||| ||||||||| |||  |||||||||||||||||||    
T  11110262 caacatcgacacatatgattacatcgaattatgtcattttctcaaatta 11110214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 28; E-Value: 0.0000008
Query Start/End: Original strand, 77 - 120
Target Start/End: Complemental strand, 13307934 - 13307891
Alignment:
Q  77 acaccgacacatgtgattacattgaacaatgtcattttctcaaa 120  Q
    ||||| |||| |||||||||||||||  ||||||||||||||||    
T  13307934 acaccaacacttgtgattacattgaattatgtcattttctcaaa 13307891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 28; E-Value: 0.0000008
Query Start/End: Original strand, 75 - 118
Target Start/End: Original strand, 40224498 - 40224541
Alignment:
Q  75 caacaccgacacatgtgattacattgaacaatgtcattttctca 118  Q
    |||||||||||||| |||||||||| ||  ||||||||||||||    
T  40224498 caacaccgacacatatgattacattaaattatgtcattttctca 40224541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 28; E-Value: 0.0000008
Query Start/End: Original strand, 75 - 134
Target Start/End: Original strand, 43299971 - 43300030
Alignment:
Q  75 caacaccgacacatgtgattacattgaacaatgtcattttctcaaattactatcagtgtc 134  Q
    |||||||| || || |||||||||||||  |||| |||||||||||||| |||| |||||    
T  43299971 caacaccggcagatatgattacattgaattatgtaattttctcaaattattatccgtgtc 43300030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 28; E-Value: 0.0000008
Query Start/End: Original strand, 75 - 134
Target Start/End: Complemental strand, 43300675 - 43300616
Alignment:
Q  75 caacaccgacacatgtgattacattgaacaatgtcattttctcaaattactatcagtgtc 134  Q
    ||||| ||||| || |||||||||||||  |||| |||||||||||||| |||| |||||    
T  43300675 caacagcgacaaatatgattacattgaattatgtaattttctcaaattattatccgtgtc 43300616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 38; Significance: 0.0000000000008; HSPs: 12)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 38; E-Value: 0.0000000000008
Query Start/End: Original strand, 83 - 136
Target Start/End: Original strand, 19323456 - 19323509
Alignment:
Q  83 acacatgtgattacattgaacaatgtcattttctcaaattactatcagtgtcga 136  Q
    ||||||||||||| ||| ||  ||||||||||||||||||||||||||||||||    
T  19323456 acacatgtgattaaattcaattatgtcattttctcaaattactatcagtgtcga 19323509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 35; E-Value: 0.00000000005
Query Start/End: Original strand, 77 - 131
Target Start/End: Complemental strand, 20691376 - 20691322
Alignment:
Q  77 acaccgacacatgtgattacattgaacaatgtcattttctcaaattactatcagt 131  Q
    |||||||||||| |||||||| ||||  ||||||||||||||||||| |||||||    
T  20691376 acaccgacacatatgattacactgaattatgtcattttctcaaattattatcagt 20691322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 35; E-Value: 0.00000000005
Query Start/End: Original strand, 77 - 130
Target Start/End: Original strand, 27513664 - 27513718
Alignment:
Q  77 acaccgacacatgtgattacattgaacaatgtca-ttttctcaaattactatcag 130  Q
    |||||||||||| ||||||||||||| ||||||| ||||||||||||| ||||||    
T  27513664 acaccgacacatatgattacattgaataatgtcatttttctcaaattattatcag 27513718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 34; E-Value: 0.0000000002
Query Start/End: Original strand, 77 - 133
Target Start/End: Complemental strand, 44427898 - 44427841
Alignment:
Q  77 acaccgacacatgtgattacattgaacaatgtcattttctcaaa-ttactatcagtgt 133  Q
    |||||||||||||||||||||||| |  |||||||||||||||| ||| |||||||||    
T  44427898 acaccgacacatgtgattacattggattatgtcattttctcaaacttattatcagtgt 44427841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 33; E-Value: 0.0000000008
Query Start/End: Original strand, 75 - 135
Target Start/End: Complemental strand, 8039265 - 8039205
Alignment:
Q  75 caacaccgacacatgtgattacattgaacaatgtcattttctcaaattactatcagtgtcg 135  Q
    |||||||||||| | |||||||||||||  ||| |||||||||||||||  ||||||||||    
T  8039265 caacaccgacacctatgattacattgaatcatgccattttctcaaattatcatcagtgtcg 8039205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 32; E-Value: 0.000000003
Query Start/End: Original strand, 82 - 141
Target Start/End: Original strand, 9210832 - 9210891
Alignment:
Q  82 gacacatgtgattacattgaacaatgtcattttctcaaattactatcagtgtcgatgtat 141  Q
    ||||||||||||| |||||||  ||||||||||||||||||| ||||  |||| ||||||    
T  9210832 gacacatgtgattccattgaattatgtcattttctcaaattattatcgttgtctatgtat 9210891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 32; E-Value: 0.000000003
Query Start/End: Original strand, 77 - 128
Target Start/End: Original strand, 40150573 - 40150624
Alignment:
Q  77 acaccgacacatgtgattacattgaacaatgtcattttctcaaattactatc 128  Q
    |||||||||||| |||||||||||||  || |||||||||||||||| ||||    
T  40150573 acaccgacacatatgattacattgaattatatcattttctcaaattattatc 40150624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 32; E-Value: 0.000000003
Query Start/End: Original strand, 75 - 134
Target Start/End: Complemental strand, 47542594 - 47542535
Alignment:
Q  75 caacaccgacacatgtgattacattgaacaatgtcattttctcaaattactatcagtgtc 134  Q
    ||||||||||||||||||||||||| ||  |  |||||||||||||||| || |||||||    
T  47542594 caacaccgacacatgtgattacattcaaatagttcattttctcaaattattaccagtgtc 47542535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 31; E-Value: 0.00000001
Query Start/End: Original strand, 75 - 133
Target Start/End: Original strand, 18268005 - 18268063
Alignment:
Q  75 caacaccgacacatgtgattacattgaacaatgtcattttctcaaattactatcagtgt 133  Q
    |||||||||||||||||||||| || ||  |  |||||||||||||||| |||||||||    
T  18268005 caacaccgacacatgtgattacgttcaattaattcattttctcaaattattatcagtgt 18268063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 29; E-Value: 0.0000002
Query Start/End: Original strand, 75 - 135
Target Start/End: Complemental strand, 1502633 - 1502573
Alignment:
Q  75 caacaccgacacatgtgattacattgaacaatgtcattttctcaaattactatcagtgtcg 135  Q
    |||||| |||||||||||||||||| ||  |||||||||||| | |||| || ||||||||    
T  1502633 caacacagacacatgtgattacattcaattatgtcattttcttagattattaccagtgtcg 1502573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 29; E-Value: 0.0000002
Query Start/End: Original strand, 75 - 123
Target Start/End: Original strand, 23271994 - 23272042
Alignment:
Q  75 caacaccgacacatgtgattacattgaacaatgtcattttctcaaatta 123  Q
    |||||||||||||| |||||||||| ||  |||||| ||||||||||||    
T  23271994 caacaccgacacatatgattacattcaattatgtcagtttctcaaatta 23272042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 29; E-Value: 0.0000002
Query Start/End: Original strand, 91 - 139
Target Start/End: Complemental strand, 34189470 - 34189422
Alignment:
Q  91 gattacattgaacaatgtcattttctcaaattactatcagtgtcgatgt 139  Q
    ||||||| ||||  ||||||||||||||||||| |||| ||||||||||    
T  34189470 gattacactgaaatatgtcattttctcaaattattatctgtgtcgatgt 34189422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 37; Significance: 0.000000000003; HSPs: 18)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 37; E-Value: 0.000000000003
Query Start/End: Original strand, 79 - 123
Target Start/End: Complemental strand, 10158039 - 10157995
Alignment:
Q  79 accgacacatgtgattacattgaacaatgtcattttctcaaatta 123  Q
    ||||||||||||||||||||||||  |||||||||||||||||||    
T  10158039 accgacacatgtgattacattgaattatgtcattttctcaaatta 10157995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 35; E-Value: 0.00000000005
Query Start/End: Original strand, 76 - 126
Target Start/End: Original strand, 10335377 - 10335427
Alignment:
Q  76 aacaccgacacatgtgattacattgaacaatgtcattttctcaaattacta 126  Q
    ||||||||||||| |||||||||| ||  ||||||||||||||||||||||    
T  10335377 aacaccgacacatctgattacattcaattatgtcattttctcaaattacta 10335427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 34; E-Value: 0.0000000002
Query Start/End: Original strand, 93 - 142
Target Start/End: Original strand, 2140499 - 2140548
Alignment:
Q  93 ttacattgaacaatgtcattttctcaaattactatcagtgtcgatgtatt 142  Q
    ||||||||||  ||||||||||||||||||| ||||| ||||||||||||    
T  2140499 ttacattgaattatgtcattttctcaaattattatcaatgtcgatgtatt 2140548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 32; E-Value: 0.000000003
Query Start/End: Original strand, 83 - 126
Target Start/End: Original strand, 3151390 - 3151433
Alignment:
Q  83 acacatgtgattacattgaacaatgtcattttctcaaattacta 126  Q
    ||||||||||||||||| ||||||  ||||||||||||||||||    
T  3151390 acacatgtgattacattcaacaattccattttctcaaattacta 3151433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 32; E-Value: 0.000000003
Query Start/End: Original strand, 77 - 120
Target Start/End: Original strand, 6751884 - 6751927
Alignment:
Q  77 acaccgacacatgtgattacattgaacaatgtcattttctcaaa 120  Q
    |||||||||| |||||||||||||||  ||||||||||||||||    
T  6751884 acaccgacacttgtgattacattgaattatgtcattttctcaaa 6751927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 32; E-Value: 0.000000003
Query Start/End: Original strand, 81 - 136
Target Start/End: Original strand, 10760848 - 10760902
Alignment:
Q  81 cgacacatgtgattacattgaacaatgtcattttctcaaattactatcagtgtcga 136  Q
    |||||| |||||||||||| || | |||||||||||||||||| ||||||||||||    
T  10760848 cgacacgtgtgattacattcaata-tgtcattttctcaaattattatcagtgtcga 10760902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 32; E-Value: 0.000000003
Query Start/End: Original strand, 77 - 120
Target Start/End: Complemental strand, 19369874 - 19369831
Alignment:
Q  77 acaccgacacatgtgattacattgaacaatgtcattttctcaaa 120  Q
    |||||||||| |||||||||||||||  ||||||||||||||||    
T  19369874 acaccgacacttgtgattacattgaattatgtcattttctcaaa 19369831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 31; E-Value: 0.00000001
Query Start/End: Original strand, 53 - 139
Target Start/End: Original strand, 122085 - 122171
Alignment:
Q  53 gtgtccgacatgtgttagagtgcaacaccgacacatgtgattacattgaacaatgtcattttctcaaattactatcagtgtcgatgt 139  Q
    |||||| ||| |||| || || ||||||| ||||||||||| |||| |||  ||||||| |||||||||||  || |||||||||||    
T  122085 gtgtcccacacgtgtcagtgtccaacaccaacacatgtgataacatcgaattatgtcatcttctcaaattatcataagtgtcgatgt 122171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 31; E-Value: 0.00000001
Query Start/End: Original strand, 77 - 123
Target Start/End: Original strand, 9024178 - 9024224
Alignment:
Q  77 acaccgacacatgtgattacattgaacaatgtcattttctcaaatta 123  Q
    |||| ||||||| |||||||||||||  |||||||||||||||||||    
T  9024178 acactgacacatatgattacattgaattatgtcattttctcaaatta 9024224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 31; E-Value: 0.00000001
Query Start/End: Original strand, 77 - 123
Target Start/End: Complemental strand, 29670950 - 29670904
Alignment:
Q  77 acaccgacacatgtgattacattgaacaatgtcattttctcaaatta 123  Q
    ||||| ||||||||| ||||||||||  |||||||||||||||||||    
T  29670950 acaccaacacatgtggttacattgaatcatgtcattttctcaaatta 29670904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 30; E-Value: 0.00000005
Query Start/End: Original strand, 81 - 142
Target Start/End: Complemental strand, 5579707 - 5579646
Alignment:
Q  81 cgacacatgtgattacattgaacaatgtcattttctcaaattactatcagtgtcgatgtatt 142  Q
    |||||| ||||| |||||||||| |||||||||||||||| |  |||| ||||||| |||||    
T  5579707 cgacacttgtgactacattgaactatgtcattttctcaaaattttatcggtgtcgacgtatt 5579646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 30; E-Value: 0.00000005
Query Start/End: Original strand, 80 - 129
Target Start/End: Complemental strand, 27661790 - 27661741
Alignment:
Q  80 ccgacacatgtgattacattgaacaatgtcattttctcaaattactatca 129  Q
    |||||||||||||||||||||||  || | ||||||| ||||||||||||    
T  27661790 ccgacacatgtgattacattgaaatatattattttcttaaattactatca 27661741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 30; E-Value: 0.00000005
Query Start/End: Original strand, 75 - 128
Target Start/End: Complemental strand, 29711321 - 29711268
Alignment:
Q  75 caacaccgacacatgtgattacattgaacaatgtcattttctcaaattactatc 128  Q
    ||||||||||||||||| ||| | ||||  ||||||||||||||||||| ||||    
T  29711321 caacaccgacacatgtggttataatgaattatgtcattttctcaaattattatc 29711268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 29; E-Value: 0.0000002
Query Start/End: Original strand, 78 - 134
Target Start/End: Original strand, 19343521 - 19343577
Alignment:
Q  78 caccgacacatgtgattacattgaacaatgtcattttctcaaattactatcagtgtc 134  Q
    |||| ||||||||||||||||||||  |||||| ||| |||||||| |||| |||||    
T  19343521 caccaacacatgtgattacattgaatcatgtcactttttcaaattaatatcggtgtc 19343577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 29; E-Value: 0.0000002
Query Start/End: Original strand, 77 - 133
Target Start/End: Complemental strand, 34058011 - 34057955
Alignment:
Q  77 acaccgacacatgtgattacattgaacaatgtcattttctcaaattactatcagtgt 133  Q
    ||||||||||||||||||||| | ||  |||||||||||| | |||||||| |||||    
T  34058011 acaccgacacatgtgattacagtcaattatgtcattttcttatattactattagtgt 34057955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 28; E-Value: 0.0000008
Query Start/End: Original strand, 76 - 123
Target Start/End: Original strand, 663785 - 663832
Alignment:
Q  76 aacaccgacacatgtgattacattgaacaatgtcattttctcaaatta 123  Q
    ||||||||||||||| ||| |||||||  ||||| |||||||||||||    
T  663785 aacaccgacacatgtaatttcattgaaatatgtctttttctcaaatta 663832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 28; E-Value: 0.0000008
Query Start/End: Original strand, 77 - 136
Target Start/End: Original strand, 4859115 - 4859174
Alignment:
Q  77 acaccgacacatgtgattacattgaacaatgtcattttctcaaattactatcagtgtcga 136  Q
    |||| ||||| ||||||||||||| |  ||||||||||||||||||| |||  |||||||    
T  4859115 acactgacacgtgtgattacattggattatgtcattttctcaaattattattggtgtcga 4859174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 28; E-Value: 0.0000008
Query Start/End: Original strand, 52 - 99
Target Start/End: Complemental strand, 6650128 - 6650081
Alignment:
Q  52 ggtgtccgacatgtgttagagtgcaacaccgacacatgtgattacatt 99  Q
    |||||| |||||||||||| ||  |||||| |||||||||||||||||    
T  6650128 ggtgtctgacatgtgttagtgttgaacacctacacatgtgattacatt 6650081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 37; Significance: 0.000000000003; HSPs: 11)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 37; E-Value: 0.000000000003
Query Start/End: Original strand, 75 - 139
Target Start/End: Original strand, 43208274 - 43208338
Alignment:
Q  75 caacaccgacacatgtgattacattgaacaatgtcattttctcaaattactatcagtgtcgatgt 139  Q
    |||||| |||| || |||||||||||||  |||||||||||||||||||||||| |||| |||||    
T  43208274 caacacagacagatatgattacattgaattatgtcattttctcaaattactatcggtgttgatgt 43208338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 32; E-Value: 0.000000003
Query Start/End: Original strand, 83 - 126
Target Start/End: Complemental strand, 7512250 - 7512207
Alignment:
Q  83 acacatgtgattacattgaacaatgtcattttctcaaattacta 126  Q
    |||||| |||||||||| || |||||||||||||||||||||||    
T  7512250 acacatctgattacattcaataatgtcattttctcaaattacta 7512207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 32; E-Value: 0.000000003
Query Start/End: Original strand, 77 - 136
Target Start/End: Complemental strand, 28296385 - 28296326
Alignment:
Q  77 acaccgacacatgtgattacattgaacaatgtcattttctcaaattactatcagtgtcga 136  Q
    ||||| |||||| ||| |||||||||  ||||||||||||||||||| |||| |||||||    
T  28296385 acaccaacacatatgagtacattgaattatgtcattttctcaaattattatcggtgtcga 28296326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 32; E-Value: 0.000000003
Query Start/End: Original strand, 77 - 136
Target Start/End: Original strand, 30080503 - 30080562
Alignment:
Q  77 acaccgacacatgtgattacattgaacaatgtcattttctcaaattactatcagtgtcga 136  Q
    ||||||| || |||||||||||||||  |||||||||||||||| |  ||||||||||||    
T  30080503 acaccgatacttgtgattacattgaattatgtcattttctcaaaattttatcagtgtcga 30080562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 30; E-Value: 0.00000005
Query Start/End: Original strand, 81 - 118
Target Start/End: Complemental strand, 10009879 - 10009842
Alignment:
Q  81 cgacacatgtgattacattgaacaatgtcattttctca 118  Q
    ||||||||||||||||||||||  ||||||||||||||    
T  10009879 cgacacatgtgattacattgaattatgtcattttctca 10009842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 30; E-Value: 0.00000005
Query Start/End: Original strand, 77 - 122
Target Start/End: Complemental strand, 32444823 - 32444778
Alignment:
Q  77 acaccgacacatgtgattacattgaacaatgtcattttctcaaatt 122  Q
    |||||||||||| |||||||||||||  ||||||| ||||||||||    
T  32444823 acaccgacacatttgattacattgaattatgtcatcttctcaaatt 32444778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 30; E-Value: 0.00000005
Query Start/End: Original strand, 75 - 136
Target Start/End: Original strand, 38749563 - 38749624
Alignment:
Q  75 caacaccgacacatgtgattacattgaacaatgtcattttctcaaattactatcagtgtcga 136  Q
    ||||||| |||||| | |||||||||||  |||||||||| |||||||| |||| |||||||    
T  38749563 caacaccaacacatataattacattgaattatgtcattttttcaaattattatcggtgtcga 38749624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 29; E-Value: 0.0000002
Query Start/End: Original strand, 90 - 126
Target Start/End: Complemental strand, 7512487 - 7512451
Alignment:
Q  90 tgattacattgaacaatgtcattttctcaaattacta 126  Q
    |||||||||| || |||||||||||||||||||||||    
T  7512487 tgattacattcaataatgtcattttctcaaattacta 7512451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 29; E-Value: 0.0000002
Query Start/End: Original strand, 76 - 128
Target Start/End: Original strand, 19737483 - 19737535
Alignment:
Q  76 aacaccgacacatgtgattacattgaacaatgtcattttctcaaattactatc 128  Q
    ||||||||||||| ||||| |||||||  |||| |||||||||||||| ||||    
T  19737483 aacaccgacacatatgattgcattgaattatgtaattttctcaaattattatc 19737535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 28; E-Value: 0.0000008
Query Start/End: Original strand, 77 - 120
Target Start/End: Complemental strand, 10010611 - 10010568
Alignment:
Q  77 acaccgacacatgtgattacattgaacaatgtcattttctcaaa 120  Q
    ||||||||||||||||||||| ||||  |||||||||| |||||    
T  10010611 acaccgacacatgtgattacaatgaattatgtcattttttcaaa 10010568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 28; E-Value: 0.0000008
Query Start/End: Original strand, 75 - 130
Target Start/End: Original strand, 10948658 - 10948713
Alignment:
Q  75 caacaccgacacatgtgattacattgaacaatgtcattttctcaaattactatcag 130  Q
    ||||||||||||||||||||||||| ||  |||||||| ||  |||||| ||||||    
T  10948658 caacaccgacacatgtgattacatttaatcatgtcattatcggaaattattatcag 10948713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 36; Significance: 0.00000000001; HSPs: 12)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 36; E-Value: 0.00000000001
Query Start/End: Original strand, 77 - 136
Target Start/End: Original strand, 31548295 - 31548354
Alignment:
Q  77 acaccgacacatgtgattacattgaacaatgtcattttctcaaattactatcagtgtcga 136  Q
    ||||||||||||||||||||||||||  |||||||||| |||||| | |||| |||||||    
T  31548295 acaccgacacatgtgattacattgaattatgtcattttatcaaataattatcggtgtcga 31548354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 35; E-Value: 0.00000000005
Query Start/End: Original strand, 54 - 120
Target Start/End: Complemental strand, 42874601 - 42874536
Alignment:
Q  54 tgtccgacatgtgttagagtgcaacaccgacacatgtgattacattgaacaatgtcattttctcaaa 120  Q
    ||||||||||||||| | || |||||| ||||| |||||||||||||||  ||||||||||||||||    
T  42874601 tgtccgacatgtgtt-gtgtccaacactgacacttgtgattacattgaattatgtcattttctcaaa 42874536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 34; E-Value: 0.0000000002
Query Start/End: Original strand, 77 - 134
Target Start/End: Complemental strand, 1433402 - 1433345
Alignment:
Q  77 acaccgacacatgtgattacattgaacaatgtcattttctcaaattactatcagtgtc 134  Q
    |||||||| ||||| ||||||||| |  ||||||||||||||||||||||| ||||||    
T  1433402 acaccgacgcatgttattacattggattatgtcattttctcaaattactattagtgtc 1433345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 31; E-Value: 0.00000001
Query Start/End: Original strand, 82 - 139
Target Start/End: Original strand, 2447231 - 2447286
Alignment:
Q  82 gacacatgtgattacattgaacaatgtcattttctcaaattactatcagtgtcgatgt 139  Q
    |||||||||||||||||| ||   ||||||||||| |||||||||||||| |||||||    
T  2447231 gacacatgtgattacatttaat--tgtcattttcttaaattactatcagtatcgatgt 2447286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 31; E-Value: 0.00000001
Query Start/End: Original strand, 85 - 127
Target Start/End: Complemental strand, 16464179 - 16464137
Alignment:
Q  85 acatgtgattacattgaacaatgtcattttctcaaattactat 127  Q
    ||||||| ||||||| |||||| ||||||||||||||||||||    
T  16464179 acatgtgtttacattcaacaatttcattttctcaaattactat 16464137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 31; E-Value: 0.00000001
Query Start/End: Original strand, 77 - 139
Target Start/End: Complemental strand, 32691800 - 32691738
Alignment:
Q  77 acaccgacacatgtgattacattgaacaatgtcattttctcaaattactatcagtgtcgatgt 139  Q
    |||| |||||||||||||||||| ||  |||||||||||| ||||||||| | ||||| ||||    
T  32691800 acactgacacatgtgattacattcaattatgtcattttcttaaattactaccggtgtcaatgt 32691738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 30; E-Value: 0.00000005
Query Start/End: Original strand, 78 - 135
Target Start/End: Original strand, 31236580 - 31236637
Alignment:
Q  78 caccgacacatgtgattacattgaacaatgtcattttctcaaattactatcagtgtcg 135  Q
    ||||||||||| | |||||||||||  |||| |||||||||||||| || ||||||||    
T  31236580 caccgacacatataattacattgaattatgtgattttctcaaattattagcagtgtcg 31236637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 30; E-Value: 0.00000005
Query Start/End: Original strand, 77 - 126
Target Start/End: Original strand, 31681832 - 31681881
Alignment:
Q  77 acaccgacacatgtgattacattgaacaatgtcattttctcaaattacta 126  Q
    |||||||||||||||||| |||| ||  |||||||||||| |||||||||    
T  31681832 acaccgacacatgtgatttcattcaattatgtcattttcttaaattacta 31681881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 29; E-Value: 0.0000002
Query Start/End: Original strand, 78 - 130
Target Start/End: Complemental strand, 3508108 - 3508056
Alignment:
Q  78 caccgacacatgtgattacattgaacaatgtcattttctcaaattactatcag 130  Q
    |||| |||||| |||||||||||||  |||| |||||||||||||| ||||||    
T  3508108 caccaacacatatgattacattgaattatgttattttctcaaattattatcag 3508056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 28; E-Value: 0.0000008
Query Start/End: Original strand, 77 - 136
Target Start/End: Complemental strand, 5307117 - 5307059
Alignment:
Q  77 acaccgacacatgtgattacattgaacaatgtcattttctcaaattactatcagtgtcga 136  Q
    |||||||||| | ||||| |||||||  |||||||||| |||||||| ||||||||||||    
T  5307117 acaccgacacttatgatttcattgaattatgtcatttt-tcaaattattatcagtgtcga 5307059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 28; E-Value: 0.0000008
Query Start/End: Original strand, 81 - 120
Target Start/End: Complemental strand, 31119140 - 31119101
Alignment:
Q  81 cgacacatgtgattacattgaacaatgtcattttctcaaa 120  Q
    |||||| |||||||||||||||  ||||||||||||||||    
T  31119140 cgacacttgtgattacattgaattatgtcattttctcaaa 31119101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 28; E-Value: 0.0000008
Query Start/End: Original strand, 92 - 139
Target Start/End: Original strand, 34201063 - 34201110
Alignment:
Q  92 attacattgaacaatgtcattttctcaaattactatcagtgtcgatgt 139  Q
    |||||||||||  ||||||||||||||||||| ||| |||||| ||||    
T  34201063 attacattgaattatgtcattttctcaaattattattagtgtcaatgt 34201110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 36; Significance: 0.00000000001; HSPs: 17)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 36; E-Value: 0.00000000001
Query Start/End: Original strand, 79 - 134
Target Start/End: Original strand, 38134410 - 38134465
Alignment:
Q  79 accgacacatgtgattacattgaacaatgtcattttctcaaattactatcagtgtc 134  Q
    |||||||||| |||||||||||||  ||||||||||||||||||| |||| |||||    
T  38134410 accgacacatatgattacattgaattatgtcattttctcaaattattatcggtgtc 38134465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 35; E-Value: 0.00000000005
Query Start/End: Original strand, 75 - 133
Target Start/End: Original strand, 36314627 - 36314685
Alignment:
Q  75 caacaccgacacatgtgattacattgaacaatgtcattttctcaaattactatcagtgt 133  Q
    ||||||| |||||| |||||||||||||  ||||||||||||||||||| ||| |||||    
T  36314627 caacaccaacacatatgattacattgaaatatgtcattttctcaaattattatgagtgt 36314685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 35; E-Value: 0.00000000005
Query Start/End: Original strand, 83 - 129
Target Start/End: Original strand, 44172898 - 44172944
Alignment:
Q  83 acacatgtgattacattgaacaatgtcattttctcaaattactatca 129  Q
    ||||||||||||||||||||  ||||||||||||||||||| |||||    
T  44172898 acacatgtgattacattgaattatgtcattttctcaaattattatca 44172944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 34; E-Value: 0.0000000002
Query Start/End: Original strand, 77 - 138
Target Start/End: Original strand, 2525846 - 2525907
Alignment:
Q  77 acaccgacacatgtgattacattgaacaatgtcattttctcaaattactatcagtgtcgatg 138  Q
    |||||||||||| |||||| ||||||  ||||||||| ||||||||| |||| |||||||||    
T  2525846 acaccgacacatatgattatattgaattatgtcatttgctcaaattattatcggtgtcgatg 2525907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 34; E-Value: 0.0000000002
Query Start/End: Original strand, 90 - 139
Target Start/End: Complemental strand, 23930263 - 23930214
Alignment:
Q  90 tgattacattgaacaatgtcattttctcaaattactatcagtgtcgatgt 139  Q
    |||||||| ||||  |||||||||||||||||||||||| ||||||||||    
T  23930263 tgattacactgaattatgtcattttctcaaattactatccgtgtcgatgt 23930214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 34; E-Value: 0.0000000002
Query Start/End: Original strand, 77 - 126
Target Start/End: Complemental strand, 37776039 - 37775990
Alignment:
Q  77 acaccgacacatgtgattacattgaacaatgtcattttctcaaattacta 126  Q
    |||| |||||||||||||||||| ||  ||||||||||||||||||||||    
T  37776039 acactgacacatgtgattacatttaattatgtcattttctcaaattacta 37775990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 32; E-Value: 0.000000003
Query Start/End: Original strand, 77 - 139
Target Start/End: Original strand, 36013800 - 36013863
Alignment:
Q  77 acaccgacacatgtgattacattgaacaatgtca-ttttctcaaattactatcagtgtcgatgt 139  Q
    |||||||||| |||||||||||||||  |||||| ||||||||||||| ||||| |||| ||||    
T  36013800 acaccgacacgtgtgattacattgaattatgtcatttttctcaaattattatcattgtcaatgt 36013863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 31; E-Value: 0.00000001
Query Start/End: Original strand, 77 - 139
Target Start/End: Complemental strand, 1885630 - 1885568
Alignment:
Q  77 acaccgacacatgtgattacattgaacaatgtcattttctcaaattactatcagtgtcgatgt 139  Q
    |||||||||| |||||||||||||||  |||||||||| ||||| |  |||| ||||||||||    
T  1885630 acaccgacacttgtgattacattgaattatgtcattttttcaaaattttatccgtgtcgatgt 1885568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 30; E-Value: 0.00000005
Query Start/End: Original strand, 78 - 123
Target Start/End: Complemental strand, 16827696 - 16827651
Alignment:
Q  78 caccgacacatgtgattacattgaacaatgtcattttctcaaatta 123  Q
    |||| ||||||||||||||||||||  ||||||||| |||||||||    
T  16827696 caccaacacatgtgattacattgaatcatgtcatttgctcaaatta 16827651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 29; E-Value: 0.0000002
Query Start/End: Original strand, 84 - 120
Target Start/End: Original strand, 2143862 - 2143898
Alignment:
Q  84 cacatgtgattacattgaacaatgtcattttctcaaa 120  Q
    |||||||||||||||||||  ||||||||||||||||    
T  2143862 cacatgtgattacattgaattatgtcattttctcaaa 2143898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 29; E-Value: 0.0000002
Query Start/End: Original strand, 77 - 125
Target Start/End: Original strand, 10893871 - 10893919
Alignment:
Q  77 acaccgacacatgtgattacattgaacaatgtcattttctcaaattact 125  Q
    ||||| ||||||||||||||||| ||  |||||||||||| ||||||||    
T  10893871 acaccaacacatgtgattacattcaattatgtcattttcttaaattact 10893919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 29; E-Value: 0.0000002
Query Start/End: Original strand, 77 - 129
Target Start/End: Original strand, 20427637 - 20427689
Alignment:
Q  77 acaccgacacatgtgattacattgaacaatgtcattttctcaaattactatca 129  Q
    |||||||||||| |||||||||| ||  ||||||| ||||||||||| |||||    
T  20427637 acaccgacacatatgattacatttaaatatgtcatcttctcaaattattatca 20427689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 28; E-Value: 0.0000008
Query Start/End: Original strand, 77 - 120
Target Start/End: Original strand, 5937423 - 5937466
Alignment:
Q  77 acaccgacacatgtgattacattgaacaatgtcattttctcaaa 120  Q
    |||| ||||| |||||||||||||||  ||||||||||||||||    
T  5937423 acacagacacttgtgattacattgaattatgtcattttctcaaa 5937466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 28; E-Value: 0.0000008
Query Start/End: Original strand, 77 - 120
Target Start/End: Original strand, 9050135 - 9050178
Alignment:
Q  77 acaccgacacatgtgattacattgaacaatgtcattttctcaaa 120  Q
    |||| |||||||||||||| ||||||| |||||||||| |||||    
T  9050135 acacagacacatgtgattatattgaactatgtcattttttcaaa 9050178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 28; E-Value: 0.0000008
Query Start/End: Original strand, 76 - 123
Target Start/End: Original strand, 23165267 - 23165314
Alignment:
Q  76 aacaccgacacatgtgattacattgaacaatgtcattttctcaaatta 123  Q
    ||||||||||||||| || ||||||||  |||||||||||||| ||||    
T  23165267 aacaccgacacatgtaatcacattgaatcatgtcattttctcagatta 23165314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 28; E-Value: 0.0000008
Query Start/End: Original strand, 77 - 128
Target Start/End: Original strand, 31808511 - 31808562
Alignment:
Q  77 acaccgacacatgtgattacattgaacaatgtcattttctcaaattactatc 128  Q
    ||||| |||||||||||||||||||    |||||||||||||||||| ||||    
T  31808511 acaccaacacatgtgattacattgacttgtgtcattttctcaaattattatc 31808562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 28; E-Value: 0.0000008
Query Start/End: Original strand, 79 - 126
Target Start/End: Complemental strand, 43160539 - 43160492
Alignment:
Q  79 accgacacatgtgattacattgaacaatgtcattttctcaaattacta 126  Q
    ||||||||||||||||||||| ||  |||| ||||||| |||||||||    
T  43160539 accgacacatgtgattacattcaattatgttattttcttaaattacta 43160492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0571 (Bit Score: 29; Significance: 0.0000002; HSPs: 1)
Name: scaffold0571
Description:

Target: scaffold0571; HSP #1
Raw Score: 29; E-Value: 0.0000002
Query Start/End: Original strand, 87 - 131
Target Start/End: Complemental strand, 7737 - 7693
Alignment:
Q  87 atgtgattacattgaacaatgtcattttctcaaattactatcagt 131  Q
    |||||||| |||||||  ||||||||||||||||||| |||||||    
T  7737 atgtgattgcattgaattatgtcattttctcaaattattatcagt 7693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0314 (Bit Score: 28; Significance: 0.0000008; HSPs: 1)
Name: scaffold0314
Description:

Target: scaffold0314; HSP #1
Raw Score: 28; E-Value: 0.0000008
Query Start/End: Original strand, 77 - 120
Target Start/End: Complemental strand, 9005 - 8962
Alignment:
Q  77 acaccgacacatgtgattacattgaacaatgtcattttctcaaa 120  Q
    |||||||||| ||||||||| |||||  ||||||||||||||||    
T  9005 acaccgacacttgtgattacgttgaattatgtcattttctcaaa 8962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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