View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: J5-5-26 (Length: 239)
Name: J5-5-26
Description: Pascalseqs
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] J5-5-26 |
 | |
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Alignment Details
Target: chr7 (Bit Score: 206; Significance: 1e-113; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 206; E-Value: 1e-113
Query Start/End: Original strand, 1 - 230
Target Start/End: Complemental strand, 33689043 - 33688814
Alignment:
| Q |
1 |
atttaggcagcacatggaaatcaaatggcatgtgtaaactaaatccttatgatatagttaaagctattgtagaagaaaattgacgagttccatattttca |
100 |
Q |
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|
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| T |
33689043 |
atttaggcagcacatggaaatcaaatggcatgtgtaaactaaatccttatgatatagttaaagctattgtagaagaaaattgacgagttccatattttca |
33688944 |
T |
|
| Q |
101 |
tgctccaaaatattgatatttttcttgaacatcccatgcactagttatgctttatctctttagctttgannnnnnnngggttcataatatttatgcttag |
200 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| |
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| T |
33688943 |
tgctccaaaatattgatatttttcttgaacatcccatgcactagttatgctttatctctttagctttgattttttttgggttcataatatttatgcttag |
33688844 |
T |
|
| Q |
201 |
aaattatgttatgatccttgttagattaat |
230 |
Q |
| |
|
|||||||||||||||||||||||||||||| |
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|
| T |
33688843 |
aaattatgttatgatccttgttagattaat |
33688814 |
T |
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