View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
Legend |
| Query |
| Query hiting target |
| Query hiting target's complemental strand |
| Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: J5-6-49 (Length: 299)
Name: J5-6-49
Description: Pascalseqs
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
[»] J5-6-49 |
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[»] scaffold0027 (1 HSPs) |
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[»] scaffold0019 (1 HSPs) |
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[»] scaffold0381 (1 HSPs) |
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[»] scaffold0746 (1 HSPs) |
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[»] scaffold0070 (2 HSPs) |
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[»] scaffold0374 (1 HSPs) |
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Alignment Details
Target: chr2 (Bit Score: 254; Significance: 1e-141; HSPs: 24)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 254; E-Value: 1e-141
Query Start/End: Original strand, 1 - 254
Target Start/End: Complemental strand, 21813478 - 21813225
Alignment:
Q |
1 |
aatgcagcgcttactagctcaagatgatgcatattggcgtcaacgtgccaagactcattggtaccgggatggagactgcaacacaaaatttttccatgca |
100 |
Q |
|
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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|
T |
21813478 |
aatgcagcgcttactagctcaagatgatgcatattggcgtcaacgtgccaagactcattggtaccgggatggagactgcaacacaaaatttttccatgca |
21813379 |
T |
|
Q |
101 |
tcagccaccgctaggaagaagttaaattgtattattttttcaacagagtttcaaactaaaaggacctatttaaaacttttgaaatggtgacggtgaaata |
200 |
Q |
|
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
T |
21813378 |
tcagccaccgctaggaagaagttaaattgtattattttttcaacagagtttcaaactaaaaggacctatttaaaacttttgaaatggtgacggtgaaata |
21813279 |
T |
|
Q |
201 |
gtttatcaactaaaaggacctttttgaaacttaaaggactaacttgagaattct |
254 |
Q |
|
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
T |
21813278 |
gtttatcaactaaaaggacctttttgaaacttaaaggactaacttgagaattct |
21813225 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #2
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 147 - 232
Target Start/End: Original strand, 31264087 - 31264172
Alignment:
Q |
147 |
agtttcaaactaaaaggacctatttaaaacttttgaaatggtgacggtgaaatagtttatcaactaaaaggacctttttgaaactt |
232 |
Q |
|
|
||||||||||||||||||||||||| |||||||||||| |||||||||||||||||||||||||||||||||||| |||||||||| |
|
|
T |
31264087 |
agtttcaaactaaaaggacctatttgaaacttttgaaagggtgacggtgaaatagtttatcaactaaaaggacctatttgaaactt |
31264172 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #3
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 149 - 254
Target Start/End: Original strand, 41265183 - 41265289
Alignment:
Q |
149 |
tttcaaactaaaaggacctatttaaaacttttgaaatggtgac-ggtgaaatagtttatcaactaaaaggacctttttgaaacttaaaggactaacttga |
247 |
Q |
|
|
||||||||||||||||| ||||| |||| ||||||| | |||| |||||||||||||||||||||||| ||| | ||||||||||||||||||||||||| |
|
|
T |
41265183 |
tttcaaactaaaaggacatatttgaaacatttgaaacgatgaccggtgaaatagtttatcaactaaaatgacttatttgaaacttaaaggactaacttga |
41265282 |
T |
|
Q |
248 |
gaattct |
254 |
Q |
|
|
||||||| |
|
|
T |
41265283 |
gaattct |
41265289 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #4
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 248 - 299
Target Start/End: Complemental strand, 21813525 - 21813474
Alignment:
Q |
248 |
gaattcttcaggtgatgccaagttcagatgttttaattacggaagagaatgc |
299 |
Q |
|
|
|||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
T |
21813525 |
gaattcttcaggtgatgccaagttcagatgttttaattacggaagagaatgc |
21813474 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #5
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 151 - 245
Target Start/End: Complemental strand, 39376355 - 39376262
Alignment:
Q |
151 |
tcaaactaaaaggacctatttaaaacttttgaaatggtgacggtgaaatagtttatcaactaaaaggacctttttgaaacttaaaggactaactt |
245 |
Q |
|
|
|||||||||||||| |||||| |||||||||||| ||| |||||||||||||||||||||||| ||| | ||||||| ||||| ||||||||| |
|
|
T |
39376355 |
tcaaactaaaaggatctatttgaaacttttgaaacaatgatggtgaaatagtttatcaactaaaaagacttatttgaaatttaaa-gactaactt |
39376262 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #6
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 194 - 251
Target Start/End: Complemental strand, 27893174 - 27893117
Alignment:
Q |
194 |
tgaaatagtttatcaactaaaaggacctttttgaaacttaaaggactaacttgagaat |
251 |
Q |
|
|
|||||||||||||||||||||| ||||| |||||||||||||||||||||||| |||| |
|
|
T |
27893174 |
tgaaatagtttatcaactaaaaagacctatttgaaacttaaaggactaacttgggaat |
27893117 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #7
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 163 - 254
Target Start/End: Complemental strand, 34336214 - 34336114
Alignment:
Q |
163 |
gacctatttaaaacttttgaaatggtgacggtgaaatagtttatcaactaaaaggacct---------ttttgaaacttaaaggactaacttgagaattc |
253 |
Q |
|
|
||||||||| |||||||||||| ||||| ||||||||||||||| |||||||| ||||| ||||||||||||||||||||||||| |||||| |
|
|
T |
34336214 |
gacctatttgaaacttttgaaacggtgatggtgaaatagtttattaactaaaaagacctatttaaaacttttgaaacttaaaggactaacttgggaattc |
34336115 |
T |
|
Q |
254 |
t |
254 |
Q |
|
|
| |
|
|
T |
34336114 |
t |
34336114 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #8
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 147 - 255
Target Start/End: Original strand, 30907245 - 30907359
Alignment:
Q |
147 |
agtttcaaactaaaaggacctatttaaaacttttgaaatggtgacggtgaaatagtttatca------actaaaaggacctttttgaaacttaaaggact |
240 |
Q |
|
|
||||||||||||||||||| ||||| |||||||||||| |||||||| |||||| ||||||| ||| | || ||||||||||||||||||| |
|
|
T |
30907245 |
agtttcaaactaaaaggacatatttgaaacttttgaaacggtgacggcgaaataatttatcataaatgacttatttgaaacttttgaaacttaaaggact |
30907344 |
T |
|
Q |
241 |
aacttgagaattctt |
255 |
Q |
|
|
||||||||||||||| |
|
|
T |
30907345 |
aacttgagaattctt |
30907359 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #9
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 190 - 252
Target Start/End: Original strand, 20535934 - 20535996
Alignment:
Q |
190 |
acggtgaaatagtttatcaactaaaaggacctttttgaaacttaaaggactaacttgagaatt |
252 |
Q |
|
|
|||||||||||||||||||||||| | ||| | ||||||||||||| |||||||||||||||| |
|
|
T |
20535934 |
acggtgaaatagtttatcaactaacaagacttatttgaaacttaaaagactaacttgagaatt |
20535996 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #10
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 190 - 232
Target Start/End: Complemental strand, 19080781 - 19080739
Alignment:
Q |
190 |
acggtgaaatagtttatcaactaaaaggacctttttgaaactt |
232 |
Q |
|
|
|||||||||||||||||||||||||||||||| | |||||||| |
|
|
T |
19080781 |
acggtgaaatagtttatcaactaaaaggacctatatgaaactt |
19080739 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #11
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 190 - 232
Target Start/End: Original strand, 36196475 - 36196517
Alignment:
Q |
190 |
acggtgaaatagtttatcaactaaaaggacctttttgaaactt |
232 |
Q |
|
|
|||||||||||||||||||||||||| ||||| |||||||||| |
|
|
T |
36196475 |
acggtgaaatagtttatcaactaaaatgacctatttgaaactt |
36196517 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #12
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 193 - 254
Target Start/End: Original strand, 39301807 - 39301868
Alignment:
Q |
193 |
gtgaaatagtttatcaactaaaaggacctttttgaaacttaaaggactaacttgagaattct |
254 |
Q |
|
|
||||||||||||||||||||||| | ||| |||||||||||||| | |||||| | |||||| |
|
|
T |
39301807 |
gtgaaatagtttatcaactaaaatggcctatttgaaacttaaagaaataacttaaaaattct |
39301868 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #13
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 190 - 230
Target Start/End: Complemental strand, 20535595 - 20535555
Alignment:
Q |
190 |
acggtgaaatagtttatcaactaaaaggacctttttgaaac |
230 |
Q |
|
|
|||||||||||||||||||||||||| ||||| |||||||| |
|
|
T |
20535595 |
acggtgaaatagtttatcaactaaaatgacctatttgaaac |
20535555 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #14
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 222 - 254
Target Start/End: Complemental strand, 31264036 - 31264004
Alignment:
Q |
222 |
ttttgaaacttaaaggactaacttgagaattct |
254 |
Q |
|
|
||||||||||||||||||||||||||||||||| |
|
|
T |
31264036 |
ttttgaaacttaaaggactaacttgagaattct |
31264004 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #15
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 154 - 232
Target Start/End: Original strand, 5117014 - 5117092
Alignment:
Q |
154 |
aactaaaaggacctatttaaaacttttgaaatggtgacggtgaaatagtttatcaactaaaaggacctttttgaaactt |
232 |
Q |
|
|
|||||||| ||| ||||| || |||||||| ||||| ||||||||| |||||||||||||| ||| | ||| |||||| |
|
|
T |
5117014 |
aactaaaatgacttatttgaaggttttgaaacggtgatggtgaaataatttatcaactaaaaagacatatttaaaactt |
5117092 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #16
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 222 - 252
Target Start/End: Complemental strand, 30907185 - 30907155
Alignment:
Q |
222 |
ttttgaaacttaaaggactaacttgagaatt |
252 |
Q |
|
|
||||||||||||||||||||||||||||||| |
|
|
T |
30907185 |
ttttgaaacttaaaggactaacttgagaatt |
30907155 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #17
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 208 - 246
Target Start/End: Complemental strand, 37543072 - 37543034
Alignment:
Q |
208 |
aactaaaaggacctttttgaaacttaaaggactaacttg |
246 |
Q |
|
|
|||||||| ||||| |||||||||||||||||||||||| |
|
|
T |
37543072 |
aactaaaatgacctgtttgaaacttaaaggactaacttg |
37543034 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #18
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 190 - 232
Target Start/End: Original strand, 42117178 - 42117220
Alignment:
Q |
190 |
acggtgaaatagtttatcaactaaaaggacctttttgaaactt |
232 |
Q |
|
|
|||||||||| ||||||||||||||||||||| ||| |||||| |
|
|
T |
42117178 |
acggtgaaattgtttatcaactaaaaggacctatttaaaactt |
42117220 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #19
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 154 - 184
Target Start/End: Original strand, 42117196 - 42117226
Alignment:
Q |
154 |
aactaaaaggacctatttaaaacttttgaaa |
184 |
Q |
|
|
||||||||||||||||||||||||||||||| |
|
|
T |
42117196 |
aactaaaaggacctatttaaaacttttgaaa |
42117226 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 147 - 208
Target Start/End: Original strand, 16780981 - 16781042
Alignment:
Q |
147 |
agtttcaaactaaaaggacctatttaaaacttttgaaatggtgacggtgaaatagtttatca |
208 |
Q |
|
|
||||||||| ||||||||| ||||| |||||||||||| |||| ||| |||||||| |||| |
|
|
T |
16780981 |
agtttcaaattaaaaggacttatttgaaacttttgaaacagtgatggtaaaatagttcatca |
16781042 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #21
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 222 - 254
Target Start/End: Original strand, 11871763 - 11871795
Alignment:
Q |
222 |
ttttgaaacttaaaggactaacttgagaattct |
254 |
Q |
|
|
||||||||||||||||||||||| ||||||||| |
|
|
T |
11871763 |
ttttgaaacttaaaggactaactcgagaattct |
11871795 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #22
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 192 - 232
Target Start/End: Original strand, 15506478 - 15506518
Alignment:
Q |
192 |
ggtgaaatagtttatcaactaaaaggacctttttgaaactt |
232 |
Q |
|
|
|||||||||||||||||||||||||||| | ||| |||||| |
|
|
T |
15506478 |
ggtgaaatagtttatcaactaaaaggacatatttaaaactt |
15506518 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #23
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 222 - 254
Target Start/End: Original strand, 27893573 - 27893605
Alignment:
Q |
222 |
ttttgaaacttaaaggactaacttgagaattct |
254 |
Q |
|
|
||||||||||||||||||||||||| ||||||| |
|
|
T |
27893573 |
ttttgaaacttaaaggactaacttgggaattct |
27893605 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #24
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 17 - 117
Target Start/End: Original strand, 45010899 - 45010999
Alignment:
Q |
17 |
gctcaagatgatgcatattggcgtcaacgtgccaagactcattggtaccgggatggagactgcaacacaaaatttttccatgcatcagccaccgctagga |
116 |
Q |
|
|
||||| |||||||| | |||||| |||| ||| || ||||||||||| |||| || ||| | |||||||| ||||| ||||| ||||| || ||||||| |
|
|
T |
45010899 |
gctcaggatgatgctttttggcggcaacatgctaaaactcattggtatagggacggtgaccgtaacacaaagttttttcatgcttcagctacggctagga |
45010998 |
T |
|
Q |
117 |
a |
117 |
Q |
|
|
| |
|
|
T |
45010999 |
a |
45010999 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6 (Bit Score: 84; Significance: 6e-40; HSPs: 21)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 84; E-Value: 6e-40
Query Start/End: Original strand, 147 - 246
Target Start/End: Complemental strand, 16168652 - 16168553
Alignment:
Q |
147 |
agtttcaaactaaaaggacctatttaaaacttttgaaatggtgacggtgaaatagtttatcaactaaaaggacctttttgaaacttaaaggactaacttg |
246 |
Q |
|
|
||||||||||||||||||||||||| |||||||||||| ||||| |||||||||||||||||||||||||||||| |||||||||||||||||||||||| |
|
|
T |
16168652 |
agtttcaaactaaaaggacctatttgaaacttttgaaacggtgagggtgaaatagtttatcaactaaaaggacctatttgaaacttaaaggactaacttg |
16168553 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #2
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 147 - 232
Target Start/End: Complemental strand, 20575609 - 20575523
Alignment:
Q |
147 |
agtttcaaactaaaaggacctatttaaaacttttgaaatggtgacggtg-aaatagtttatcaactaaaaggacctttttgaaactt |
232 |
Q |
|
|
||||||||| ||||||||||||||| ||||||||||||||||||||||| |||||||||||||||| ||| ||||| |||||||||| |
|
|
T |
20575609 |
agtttcaaattaaaaggacctatttgaaacttttgaaatggtgacggtgaaaatagtttatcaactgaaatgacctatttgaaactt |
20575523 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #3
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 153 - 232
Target Start/End: Original strand, 32417647 - 32417726
Alignment:
Q |
153 |
aaactaaaaggacctatttaaaacttttgaaatggtgacggtgaaatagtttatcaactaaaaggacctttttgaaactt |
232 |
Q |
|
|
||||||||| ||| ||||| |||||||||||| | |||||||||||||||||||||||||||||||||| |||||||||| |
|
|
T |
32417647 |
aaactaaaatgacatatttgaaacttttgaaacgatgacggtgaaatagtttatcaactaaaaggacctatttgaaactt |
32417726 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #4
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 153 - 232
Target Start/End: Original strand, 32423488 - 32423567
Alignment:
Q |
153 |
aaactaaaaggacctatttaaaacttttgaaatggtgacggtgaaatagtttatcaactaaaaggacctttttgaaactt |
232 |
Q |
|
|
||||||||| ||| ||||| |||||||||||| | |||||||||||||||||||||||||||||||||| |||||||||| |
|
|
T |
32423488 |
aaactaaaatgacatatttgaaacttttgaaacgatgacggtgaaatagtttatcaactaaaaggacctatttgaaactt |
32423567 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #5
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 190 - 252
Target Start/End: Complemental strand, 11527680 - 11527618
Alignment:
Q |
190 |
acggtgaaatagtttatcaactaaaaggacctttttgaaacttaaaggactaacttgagaatt |
252 |
Q |
|
|
|||||||||||||||||||||||||| ||||| |||||||||||||||||||||||| ||||| |
|
|
T |
11527680 |
acggtgaaatagtttatcaactaaaatgacctatttgaaacttaaaggactaacttgtgaatt |
11527618 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #6
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 190 - 254
Target Start/End: Original strand, 2840032 - 2840096
Alignment:
Q |
190 |
acggtgaaatagtttatcaactaaaaggacctttttgaaacttaaaggactaacttgagaattct |
254 |
Q |
|
|
|||||||||||||||||||||||||| ||||| ||||||||||||| || ||||||||||||||| |
|
|
T |
2840032 |
acggtgaaatagtttatcaactaaaatgacctatttgaaacttaaatgattaacttgagaattct |
2840096 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #7
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 194 - 254
Target Start/End: Complemental strand, 2839765 - 2839705
Alignment:
Q |
194 |
tgaaatagtttatcaactaaaaggacctttttgaaacttaaaggactaacttgagaattct |
254 |
Q |
|
|
|||||||||||||||||||||| |||| ||||||| |||||||||||||||||||||||| |
|
|
T |
2839765 |
tgaaatagtttatcaactaaaaaaacctatttgaaatttaaaggactaacttgagaattct |
2839705 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #8
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 190 - 242
Target Start/End: Original strand, 9946685 - 9946737
Alignment:
Q |
190 |
acggtgaaatagtttatcaactaaaaggacctttttgaaacttaaaggactaa |
242 |
Q |
|
|
|||||||||||||||||||||||||||||||| ||||||| |||||||||||| |
|
|
T |
9946685 |
acggtgaaatagtttatcaactaaaaggacctctttgaaatttaaaggactaa |
9946737 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #9
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 192 - 254
Target Start/End: Original strand, 28630599 - 28630661
Alignment:
Q |
192 |
ggtgaaatagtttatcaactaaaaggacctttttgaaacttaaaggactaacttgagaattct |
254 |
Q |
|
|
|||||||||||||||||||||||||||||| |||||| ||||||| |||||||| ||||||| |
|
|
T |
28630599 |
ggtgaaatagtttatcaactaaaaggacctatttgaagcttaaagtactaacttaggaattct |
28630661 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #10
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 190 - 232
Target Start/End: Original strand, 10862558 - 10862600
Alignment:
Q |
190 |
acggtgaaatagtttatcaactaaaaggacctttttgaaactt |
232 |
Q |
|
|
|||||||||||||||||||||||||||||||| |||||||||| |
|
|
T |
10862558 |
acggtgaaatagtttatcaactaaaaggacctatttgaaactt |
10862600 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #11
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 2 - 99
Target Start/End: Original strand, 20927264 - 20927361
Alignment:
Q |
2 |
atgcagcgcttactagctcaagatgatgcatattggcgtcaacgtgccaagactcattggtaccgggatggagactgcaacacaaaatttttccatgc |
99 |
Q |
|
|
|||||||| ||| || ||||||||| ||| || ||||||||||||| ||||| |||||||| |||||||||| |||||| |||||||||||||| |
|
|
T |
20927264 |
atgcagcgtttattatctcaagatgttgcttactggcgtcaacgtggaaagacccattggtagaaggatggagacaacaacaccaaatttttccatgc |
20927361 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #12
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 192 - 245
Target Start/End: Complemental strand, 24139140 - 24139087
Alignment:
Q |
192 |
ggtgaaatagtttatcaactaaaaggacctttttgaaacttaaaggactaactt |
245 |
Q |
|
|
||||||||| |||||||||||||| ||| ||||||||||||||| || |||||| |
|
|
T |
24139140 |
ggtgaaataatttatcaactaaaatgacatttttgaaacttaaatgattaactt |
24139087 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #13
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 20 - 133
Target Start/End: Original strand, 26904544 - 26904657
Alignment:
Q |
20 |
caagatgatgcatattggcgtcaacgtgccaagactcattggtaccgggatggagactgcaacacaaaatttttccatgcatcagccaccgctaggaaga |
119 |
Q |
|
|
||||||||||| |||||||| |||||||| ||||||||||||||| |||||| || | || |||||||| || |||| ||| || | ||| |||||| |
|
|
T |
26904544 |
caagatgatgcctattggcgacaacgtgctaagactcattggtacaaggatggtgatcgaaatacaaaattctttcatgtatctgcttcagcttggaaga |
26904643 |
T |
|
Q |
120 |
agttaaattgtatt |
133 |
Q |
|
|
|| ||||| ||||| |
|
|
T |
26904644 |
aggtaaatcgtatt |
26904657 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #14
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 190 - 232
Target Start/End: Original strand, 17180110 - 17180152
Alignment:
Q |
190 |
acggtgaaatagtttatcaactaaaaggacctttttgaaactt |
232 |
Q |
|
|
|||||||||||||||||||||||||| || || |||||||||| |
|
|
T |
17180110 |
acggtgaaatagtttatcaactaaaatgatctatttgaaactt |
17180152 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #15
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 222 - 255
Target Start/End: Complemental strand, 2839677 - 2839644
Alignment:
Q |
222 |
ttttgaaacttaaaggactaacttgagaattctt |
255 |
Q |
|
|
|||||||||||||| ||||||||||||||||||| |
|
|
T |
2839677 |
ttttgaaacttaaacgactaacttgagaattctt |
2839644 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #16
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 151 - 184
Target Start/End: Complemental strand, 20575490 - 20575457
Alignment:
Q |
151 |
tcaaactaaaaggacctatttaaaacttttgaaa |
184 |
Q |
|
|
||||||||||||||||||||||||||||| |||| |
|
|
T |
20575490 |
tcaaactaaaaggacctatttaaaactttcgaaa |
20575457 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #17
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 151 - 184
Target Start/End: Complemental strand, 32417607 - 32417574
Alignment:
Q |
151 |
tcaaactaaaaggacctatttaaaacttttgaaa |
184 |
Q |
|
|
||||||||||||||| |||||||||||||||||| |
|
|
T |
32417607 |
tcaaactaaaaggacatatttaaaacttttgaaa |
32417574 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #18
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 151 - 184
Target Start/End: Complemental strand, 32423448 - 32423415
Alignment:
Q |
151 |
tcaaactaaaaggacctatttaaaacttttgaaa |
184 |
Q |
|
|
||||||||||||||| |||||||||||||||||| |
|
|
T |
32423448 |
tcaaactaaaaggacatatttaaaacttttgaaa |
32423415 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #19
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 153 - 185
Target Start/End: Original strand, 10963161 - 10963193
Alignment:
Q |
153 |
aaactaaaaggacctatttaaaacttttgaaat |
185 |
Q |
|
|
||||||||| ||||||||||||||||||||||| |
|
|
T |
10963161 |
aaactaaaatgacctatttaaaacttttgaaat |
10963193 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #20
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 222 - 254
Target Start/End: Original strand, 17132227 - 17132259
Alignment:
Q |
222 |
ttttgaaacttaaaggactaacttgagaattct |
254 |
Q |
|
|
||||||||||||||||| ||||||||||||||| |
|
|
T |
17132227 |
ttttgaaacttaaaggattaacttgagaattct |
17132259 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #21
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 222 - 254
Target Start/End: Original strand, 20575609 - 20575641
Alignment:
Q |
222 |
ttttgaaacttaaaggactaacttgagaattct |
254 |
Q |
|
|
||||||||||||||||||||||||| ||||||| |
|
|
T |
20575609 |
ttttgaaacttaaaggactaacttgggaattct |
20575641 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7 (Bit Score: 77; Significance: 9e-36; HSPs: 35)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 77; E-Value: 9e-36
Query Start/End: Original strand, 1 - 121
Target Start/End: Complemental strand, 8865365 - 8865245
Alignment:
Q |
1 |
aatgcagcgcttactagctcaagatgatgcatattggcgtcaacgtgccaagactcattggtaccgggatggagactgcaacacaaaatttttccatgca |
100 |
Q |
|
|
|||||||||||||||| |||| |||||||| |||||||||||||| ||||||||||||||||| || ||||||||| |||||||||| ||||| |||||| |
|
|
T |
8865365 |
aatgcagcgcttactatctcaggatgatgcctattggcgtcaacgcgccaagactcattggtatcgtgatggagaccgcaacacaaatttttttcatgca |
8865266 |
T |
|
Q |
101 |
tcagccaccgctaggaagaag |
121 |
Q |
|
|
||| |||| |||||||||||| |
|
|
T |
8865265 |
tcaaccactgctaggaagaag |
8865245 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #2
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 147 - 246
Target Start/End: Original strand, 36566450 - 36566549
Alignment:
Q |
147 |
agtttcaaactaaaaggacctatttaaaacttttgaaatggtgacggtgaaatagtttatcaactaaaaggacctttttgaaacttaaaggactaacttg |
246 |
Q |
|
|
||||||||||||||||||||||||| |||||||||||| |||||||||||||||||||||||||||||| ||| | ||||||||||||| |||||||||| |
|
|
T |
36566450 |
agtttcaaactaaaaggacctatttgaaacttttgaaaaggtgacggtgaaatagtttatcaactaaaaagacatatttgaaacttaaaagactaacttg |
36566549 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #3
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 153 - 254
Target Start/End: Complemental strand, 31893431 - 31893330
Alignment:
Q |
153 |
aaactaaaaggacctatttaaaacttttgaaatggtgacggtgaaatagtttatcaactaaaaggacctttttgaaacttaaaggactaacttgagaatt |
252 |
Q |
|
|
||||||||||||||||||| |||||||||||| |||||| ||||||||||||||| ||||||| ||||| ||||||||||||| ||||||||| ||||| |
|
|
T |
31893431 |
aaactaaaaggacctatttgaaacttttgaaacggtgactgtgaaatagtttatcgactaaaatgacctatttgaaacttaaaagactaacttaggaatt |
31893332 |
T |
|
Q |
253 |
ct |
254 |
Q |
|
|
|| |
|
|
T |
31893331 |
ct |
31893330 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #4
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 147 - 232
Target Start/End: Original strand, 21413038 - 21413123
Alignment:
Q |
147 |
agtttcaaactaaaaggacctatttaaaacttttgaaatggtgacggtgaaatagtttatcaactaaaaggacctttttgaaactt |
232 |
Q |
|
|
||||| ||| |||||||||||||||||||||||||||| |||||||||||| |||||||| |||||||||||||| |||||||||| |
|
|
T |
21413038 |
agttttaaattaaaaggacctatttaaaacttttgaaacggtgacggtgaagtagtttatgaactaaaaggacctatttgaaactt |
21413123 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #5
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 147 - 215
Target Start/End: Complemental strand, 33879478 - 33879410
Alignment:
Q |
147 |
agtttcaaactaaaaggacctatttaaaacttttgaaatggtgacggtgaaatagtttatcaactaaaa |
215 |
Q |
|
|
|||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| |
|
|
T |
33879478 |
agtttcaaactaaaaggacctatttaaaacttttgaaacagtgacggtgaaatagtttatcaactaaaa |
33879410 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #6
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 147 - 232
Target Start/End: Original strand, 4187618 - 4187703
Alignment:
Q |
147 |
agtttcaaactaaaaggacctatttaaaacttttgaaatggtgacggtgaaatagtttatcaactaaaaggacctttttgaaactt |
232 |
Q |
|
|
||||||||||||||| ||| ||||| |||||||||||||||||| |||||||||||||||||||||||| ||||| ||| |||||| |
|
|
T |
4187618 |
agtttcaaactaaaatgacttatttgaaacttttgaaatggtgaaggtgaaatagtttatcaactaaaatgacctatttaaaactt |
4187703 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #7
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 153 - 232
Target Start/End: Original strand, 19925272 - 19925351
Alignment:
Q |
153 |
aaactaaaaggacctatttaaaacttttgaaatggtgacggtgaaatagtttatcaactaaaaggacctttttgaaactt |
232 |
Q |
|
|
||||||||| ||||||||| |||||||||||| |||| |||||||||||||||||||| ||||||||| |||||||||| |
|
|
T |
19925272 |
aaactaaaaagacctatttgaaacttttgaaacagtgatggtgaaatagtttatcaactgaaaggacctatttgaaactt |
19925351 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #8
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 193 - 254
Target Start/End: Original strand, 1441416 - 1441477
Alignment:
Q |
193 |
gtgaaatagtttatcaactaaaaggacctttttgaaacttaaaggactaacttgagaattct |
254 |
Q |
|
|
||||||||||||||||||||||||||||| ||||||||||||| |||||||||| ||||||| |
|
|
T |
1441416 |
gtgaaatagtttatcaactaaaaggacctatttgaaacttaaaagactaacttgggaattct |
1441477 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #9
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 147 - 232
Target Start/End: Complemental strand, 34951423 - 34951338
Alignment:
Q |
147 |
agtttcaaactaaaaggacctatttaaaacttttgaaatggtgacggtgaaatagtttatcaactaaaaggacctttttgaaactt |
232 |
Q |
|
|
||||||||||||||| |||||||| |||||||||||| ||||| ||||||||||||||||||||||| ||| | |||||||||| |
|
|
T |
34951423 |
agtttcaaactaaaaaaacctatttgaaacttttgaaacagtgacagtgaaatagtttatcaactaaaatgacttatttgaaactt |
34951338 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #10
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 190 - 246
Target Start/End: Original strand, 8040127 - 8040183
Alignment:
Q |
190 |
acggtgaaatagtttatcaactaaaaggacctttttgaaacttaaaggactaacttg |
246 |
Q |
|
|
|||||||||||||| ||||||||||||||||| |||||||||||||||||||||||| |
|
|
T |
8040127 |
acggtgaaatagttcatcaactaaaaggacctatttgaaacttaaaggactaacttg |
8040183 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #11
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 192 - 238
Target Start/End: Complemental strand, 39958829 - 39958783
Alignment:
Q |
192 |
ggtgaaatagtttatcaactaaaaggacctttttgaaacttaaagga |
238 |
Q |
|
|
|||||||||||||||||||||||||||||| |||||||||||||||| |
|
|
T |
39958829 |
ggtgaaatagtttatcaactaaaaggacctatttgaaacttaaagga |
39958783 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #12
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 190 - 254
Target Start/End: Original strand, 5559599 - 5559662
Alignment:
Q |
190 |
acggtgaaatagtttatcaactaaaaggacctttttgaaacttaaaggactaacttgagaattct |
254 |
Q |
|
|
|||||||||||||| ||||||||||| ||| | |||||||||||||||||||||||| ||||||| |
|
|
T |
5559599 |
acggtgaaatagtt-atcaactaaaaagacttatttgaaacttaaaggactaacttgggaattct |
5559662 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #13
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 18 - 102
Target Start/End: Complemental strand, 17245582 - 17245498
Alignment:
Q |
18 |
ctcaagatgatgcatattggcgtcaacgtgccaagactcattggtaccgggatggagactgcaacacaaaatttttccatgcatc |
102 |
Q |
|
|
||||||||||||| |||||||| |||||||| ||||||||||||||| |||||| || | ||||| |||||||| |||||||| |
|
|
T |
17245582 |
ctcaagatgatgcttattggcggcaacgtgcaaagactcattggtacaaggatggcgatagaaacaccaaattttttcatgcatc |
17245498 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #14
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 190 - 232
Target Start/End: Complemental strand, 5559262 - 5559220
Alignment:
Q |
190 |
acggtgaaatagtttatcaactaaaaggacctttttgaaactt |
232 |
Q |
|
|
|||||||||||||||||||||||||||||||| |||||||||| |
|
|
T |
5559262 |
acggtgaaatagtttatcaactaaaaggacctatttgaaactt |
5559220 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #15
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 190 - 232
Target Start/End: Complemental strand, 8039799 - 8039757
Alignment:
Q |
190 |
acggtgaaatagtttatcaactaaaaggacctttttgaaactt |
232 |
Q |
|
|
|||||||||||||||||||||||||||||||| |||||||||| |
|
|
T |
8039799 |
acggtgaaatagtttatcaactaaaaggacctatttgaaactt |
8039757 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #16
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 190 - 232
Target Start/End: Complemental strand, 10619953 - 10619911
Alignment:
Q |
190 |
acggtgaaatagtttatcaactaaaaggacctttttgaaactt |
232 |
Q |
|
|
|||||||||||||||||||||||||||||||| |||||||||| |
|
|
T |
10619953 |
acggtgaaatagtttatcaactaaaaggacctatttgaaactt |
10619911 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #17
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 208 - 254
Target Start/End: Original strand, 31893474 - 31893520
Alignment:
Q |
208 |
aactaaaaggacctttttgaaacttaaaggactaacttgagaattct |
254 |
Q |
|
|
|||||||||||| | |||||||||||||||||||||||||||||||| |
|
|
T |
31893474 |
aactaaaaggacttatttgaaacttaaaggactaacttgagaattct |
31893520 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #18
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 190 - 231
Target Start/End: Complemental strand, 20366200 - 20366159
Alignment:
Q |
190 |
acggtgaaatagtttatcaactaaaaggacctttttgaaact |
231 |
Q |
|
|
|||||||||||||||||||||||||| ||||| ||||||||| |
|
|
T |
20366200 |
acggtgaaatagtttatcaactaaaaagacctatttgaaact |
20366159 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #19
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 191 - 252
Target Start/End: Original strand, 28256918 - 28256979
Alignment:
Q |
191 |
cggtgaaatagtttatcaactaaaaggacctttttgaaacttaaaggactaacttgagaatt |
252 |
Q |
|
|
|||||||||| |||||||||||||| || | ||| ||||||||||||||||||||| |||| |
|
|
T |
28256918 |
cggtgaaataatttatcaactaaaataacatatttaaaacttaaaggactaacttgaaaatt |
28256979 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #20
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 190 - 254
Target Start/End: Complemental strand, 35214960 - 35214887
Alignment:
Q |
190 |
acggtgaaatagtttatcaactaaaaggacc---------tttttgaaacttaaaggactaacttgagaattct |
254 |
Q |
|
|
|||||||||||||||||||||||||| |||| ||||||||||||||| |||||||||||||||||| |
|
|
T |
35214960 |
acggtgaaatagtttatcaactaaaaagacctatttgaaatttttgaaacttaaaagactaacttgagaattct |
35214887 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 190 - 254
Target Start/End: Original strand, 42990989 - 42991052
Alignment:
Q |
190 |
acggtgaaatagtttatcaactaaaaggacctttttgaaacttaaaggactaacttgagaattct |
254 |
Q |
|
|
|||||||||||||||||||||||||| ||||| ||| ||| ||||| || |||||||| |||||| |
|
|
T |
42990989 |
acggtgaaatagtttatcaactaaaaagacctatttaaaatttaaa-gattaacttgaaaattct |
42991052 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #22
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 193 - 232
Target Start/End: Complemental strand, 28256643 - 28256604
Alignment:
Q |
193 |
gtgaaatagtttatcaactaaaaggacctttttgaaactt |
232 |
Q |
|
|
|||||||||||||||||||||||| |||| |||||||||| |
|
|
T |
28256643 |
gtgaaatagtttatcaactaaaagaacctatttgaaactt |
28256604 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #23
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 190 - 232
Target Start/End: Original strand, 1349120 - 1349162
Alignment:
Q |
190 |
acggtgaaatagtttatcaactaaaaggacctttttgaaactt |
232 |
Q |
|
|
|||||||||| ||||||||||||||| ||||| |||||||||| |
|
|
T |
1349120 |
acggtgaaatggtttatcaactaaaatgacctatttgaaactt |
1349162 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #24
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 190 - 232
Target Start/End: Original strand, 27995551 - 27995593
Alignment:
Q |
190 |
acggtgaaatagtttatcaactaaaaggacctttttgaaactt |
232 |
Q |
|
|
||||||||||||||||||||||||||||| || ||| |||||| |
|
|
T |
27995551 |
acggtgaaatagtttatcaactaaaaggatctatttaaaactt |
27995593 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #25
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 222 - 252
Target Start/End: Original strand, 31893437 - 31893467
Alignment:
Q |
222 |
ttttgaaacttaaaggactaacttgagaatt |
252 |
Q |
|
|
||||||||||||||||||||||||||||||| |
|
|
T |
31893437 |
ttttgaaacttaaaggactaacttgagaatt |
31893467 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #26
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 194 - 232
Target Start/End: Complemental strand, 33235183 - 33235145
Alignment:
Q |
194 |
tgaaatagtttatcaactaaaaggacctttttgaaactt |
232 |
Q |
|
|
|||||||||||||||||||||| ||||| |||||||||| |
|
|
T |
33235183 |
tgaaatagtttatcaactaaaatgacctctttgaaactt |
33235145 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #27
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 190 - 232
Target Start/End: Original strand, 39959165 - 39959207
Alignment:
Q |
190 |
acggtgaaatagtttatcaactaaaaggacctttttgaaactt |
232 |
Q |
|
|
|||||||||||||||||||| |||||| |||| |||||||||| |
|
|
T |
39959165 |
acggtgaaatagtttatcaagtaaaagaacctatttgaaactt |
39959207 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #28
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 226 - 254
Target Start/End: Complemental strand, 5805086 - 5805058
Alignment:
Q |
226 |
gaaacttaaaggactaacttgagaattct |
254 |
Q |
|
|
||||||||||||||||||||||||||||| |
|
|
T |
5805086 |
gaaacttaaaggactaacttgagaattct |
5805058 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #29
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 248 - 299
Target Start/End: Complemental strand, 8865413 - 8865361
Alignment:
Q |
248 |
gaattcttcaggtgatgcc-aagttcagatgttttaattacggaagagaatgc |
299 |
Q |
|
|
||||||||||||||||| |||||||||||||| ||||||| |||||||||| |
|
|
T |
8865413 |
gaattcttcaggtgatggataagttcagatgtttgaattacgcaagagaatgc |
8865361 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #30
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 190 - 246
Target Start/End: Original strand, 10620206 - 10620262
Alignment:
Q |
190 |
acggtgaaatagtttatcaactaaaaggacctttttgaaacttaaaggactaacttg |
246 |
Q |
|
|
|||||| |||| |||||||||||||| || | |||||||||||||||||| ||||| |
|
|
T |
10620206 |
acggtggaataatttatcaactaaaataacttatttgaaacttaaaggacttacttg |
10620262 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #31
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 222 - 254
Target Start/End: Original strand, 19925350 - 19925382
Alignment:
Q |
222 |
ttttgaaacttaaaggactaacttgagaattct |
254 |
Q |
|
|
||||||||||||||||||||||||| ||||||| |
|
|
T |
19925350 |
ttttgaaacttaaaggactaacttgggaattct |
19925382 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #32
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 226 - 254
Target Start/End: Complemental strand, 20366096 - 20366068
Alignment:
Q |
226 |
gaaacttaaaggactaacttgagaattct |
254 |
Q |
|
|
||||||||||||||||||||||||||||| |
|
|
T |
20366096 |
gaaacttaaaggactaacttgagaattct |
20366068 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #33
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 222 - 254
Target Start/End: Complemental strand, 21412978 - 21412946
Alignment:
Q |
222 |
ttttgaaacttaaaggactaacttgagaattct |
254 |
Q |
|
|
|||||||||||||||||||||||||| |||||| |
|
|
T |
21412978 |
ttttgaaacttaaaggactaacttgaaaattct |
21412946 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #34
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 222 - 254
Target Start/End: Complemental strand, 21413038 - 21413006
Alignment:
Q |
222 |
ttttgaaacttaaaggactaacttgagaattct |
254 |
Q |
|
|
|||||||||||||| |||||||||||||||||| |
|
|
T |
21413038 |
ttttgaaacttaaaagactaacttgagaattct |
21413006 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #35
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 222 - 254
Target Start/End: Complemental strand, 27995173 - 27995141
Alignment:
Q |
222 |
ttttgaaacttaaaggactaacttgagaattct |
254 |
Q |
|
|
||||||||||||||||| ||||||||||||||| |
|
|
T |
27995173 |
ttttgaaacttaaaggattaacttgagaattct |
27995141 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4 (Bit Score: 66; Significance: 3e-29; HSPs: 25)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 147 - 232
Target Start/End: Original strand, 26329875 - 26329960
Alignment:
Q |
147 |
agtttcaaactaaaaggacctatttaaaacttttgaaatggtgacggtgaaatagtttatcaactaaaaggacctttttgaaactt |
232 |
Q |
|
|
||||||||||||||||||| ||||| ||||||||||||||||||| ||||||||||||||||||||||| ||||| |||||||||| |
|
|
T |
26329875 |
agtttcaaactaaaaggacttatttgaaacttttgaaatggtgacagtgaaatagtttatcaactaaaatgacctatttgaaactt |
26329960 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #2
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 147 - 232
Target Start/End: Complemental strand, 22025249 - 22025164
Alignment:
Q |
147 |
agtttcaaactaaaaggacctatttaaaacttttgaaatggtgacggtgaaatagtttatcaactaaaaggacctttttgaaactt |
232 |
Q |
|
|
|||||||||||||||||| |||||| |||||||||||| ||| ||||||||||||||||||||||||||| |||| |||||||||| |
|
|
T |
22025249 |
agtttcaaactaaaaggagctatttgaaacttttgaaacggttacggtgaaatagtttatcaactaaaagaacctatttgaaactt |
22025164 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #3
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 147 - 221
Target Start/End: Original strand, 36890575 - 36890649
Alignment:
Q |
147 |
agtttcaaactaaaaggacctatttaaaacttttgaaatggtgacggtgaaatagtttatcaactaaaaggacct |
221 |
Q |
|
|
||||||||||||||| ||| ||||| |||||||||||| |||||||||||||||||||||||||||||| ||||| |
|
|
T |
36890575 |
agtttcaaactaaaatgacatatttgaaacttttgaaacggtgacggtgaaatagtttatcaactaaaatgacct |
36890649 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #4
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 147 - 232
Target Start/End: Complemental strand, 43098373 - 43098289
Alignment:
Q |
147 |
agtttcaaactaaaaggacctatttaaaacttttgaaatggtgacggtgaaatagtttatcaactaaaaggacctttttgaaactt |
232 |
Q |
|
|
||||||||||||||| || |||||| ||||||||||| ||||| ||||||||||||||||||||||||||| | |||||||||| |
|
|
T |
43098373 |
agtttcaaactaaaatgatctatttgaaacttttgaac-ggtgatcgtgaaatagtttatcaactaaaaggacttatttgaaactt |
43098289 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #5
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 193 - 252
Target Start/End: Original strand, 44916294 - 44916353
Alignment:
Q |
193 |
gtgaaatagtttatcaactaaaaggacctttttgaaacttaaaggactaacttgagaatt |
252 |
Q |
|
|
||||||||||||||||||||||| |||| ||||||||||||||||||||||||| |||| |
|
|
T |
44916294 |
gtgaaatagtttatcaactaaaataacctatttgaaacttaaaggactaacttgaaaatt |
44916353 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #6
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 203 - 254
Target Start/End: Original strand, 52866347 - 52866398
Alignment:
Q |
203 |
ttatcaactaaaaggacctttttgaaacttaaaggactaacttgagaattct |
254 |
Q |
|
|
||||||||||||||||| |||||||||||||||||||||||||| ||||||| |
|
|
T |
52866347 |
ttatcaactaaaaggacatttttgaaacttaaaggactaacttgggaattct |
52866398 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #7
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 190 - 242
Target Start/End: Complemental strand, 19631911 - 19631859
Alignment:
Q |
190 |
acggtgaaatagtttatcaactaaaaggacctttttgaaacttaaaggactaa |
242 |
Q |
|
|
||||| |||||||||||||||||||| ||||| |||||||||||||||||||| |
|
|
T |
19631911 |
acggtaaaatagtttatcaactaaaatgacctatttgaaacttaaaggactaa |
19631859 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #8
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 18 - 121
Target Start/End: Complemental strand, 27012844 - 27012741
Alignment:
Q |
18 |
ctcaagatgatgcatattggcgtcaacgtgccaagactcattggtaccgggatggagactgcaacacaaaatttttccatgcatcagccaccgctaggaa |
117 |
Q |
|
|
||||||| ||||| |||||||| ||| | || |||||||||||||| || ||||| ||||| ||||| ||||| || |||||||| ||||| ||||| || |
|
|
T |
27012844 |
ctcaagaagatgcttattggcggcaatgcgctaagactcattggtatcgagatggcgactgaaacacgaaattatttcatgcatctgccactgctagaaa |
27012745 |
T |
|
Q |
118 |
gaag |
121 |
Q |
|
|
|||| |
|
|
T |
27012744 |
gaag |
27012741 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #9
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 194 - 241
Target Start/End: Complemental strand, 52866096 - 52866049
Alignment:
Q |
194 |
tgaaatagtttatcaactaaaaggacctttttgaaacttaaaggacta |
241 |
Q |
|
|
|||||||||||||||||||||| ||||| ||||||||||||||||||| |
|
|
T |
52866096 |
tgaaatagtttatcaactaaaatgacctatttgaaacttaaaggacta |
52866049 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #10
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 149 - 218
Target Start/End: Original strand, 35023910 - 35023979
Alignment:
Q |
149 |
tttcaaactaaaaggacctatttaaaacttttgaaatggtgacggtgaaatagtttatcaactaaaagga |
218 |
Q |
|
|
||||||| ||||| ||| ||||| ||| ||||||||| || ||| ||||||||||||||||||||||||| |
|
|
T |
35023910 |
tttcaaattaaaatgacatatttgaaatttttgaaatagttacgatgaaatagtttatcaactaaaagga |
35023979 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #11
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 13 - 99
Target Start/End: Original strand, 6613642 - 6613728
Alignment:
Q |
13 |
actagctcaagatgatgcatattggcgtcaacgtgccaagactcattggtaccgggatggagactgcaacacaaaatttttccatgc |
99 |
Q |
|
|
||||||||||||||||||||||||||||||| | || || || |||||| || || |||||| | ||||||||||| |||||||| |
|
|
T |
6613642 |
actagctcaagatgatgcatattggcgtcaaagagcgaaagcttattggtttcgtgacggagaccgtaacacaaaattcttccatgc |
6613728 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #12
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 190 - 252
Target Start/End: Original strand, 30543108 - 30543170
Alignment:
Q |
190 |
acggtgaaatagtttatcaactaaaaggacctttttgaaacttaaaggactaacttgagaatt |
252 |
Q |
|
|
|||||||||||||||||||| ||||| || | ||||||| ||||||||||||||||| |||| |
|
|
T |
30543108 |
acggtgaaatagtttatcaattaaaatgatttatttgaaatttaaaggactaacttgataatt |
30543170 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #13
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 190 - 232
Target Start/End: Complemental strand, 31229408 - 31229366
Alignment:
Q |
190 |
acggtgaaatagtttatcaactaaaaggacctttttgaaactt |
232 |
Q |
|
|
||||||||||||||||||||||||||| |||| |||||||||| |
|
|
T |
31229408 |
acggtgaaatagtttatcaactaaaagaacctatttgaaactt |
31229366 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #14
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 190 - 254
Target Start/End: Original strand, 52183404 - 52183468
Alignment:
Q |
190 |
acggtgaaatagtttatcaactaaaaggacctttttgaaacttaaaggactaacttgagaattct |
254 |
Q |
|
|
|||||||||||||||||||||| ||| || | |||||||||||||||||| |||| ||||||| |
|
|
T |
52183404 |
acggtgaaatagtttatcaacttaaaaaacttatttgaaacttaaaggactggcttgggaattct |
52183468 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #15
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 194 - 232
Target Start/End: Complemental strand, 30542769 - 30542731
Alignment:
Q |
194 |
tgaaatagtttatcaactaaaaggacctttttgaaactt |
232 |
Q |
|
|
||||||||||||||||||||||||| || |||||||||| |
|
|
T |
30542769 |
tgaaatagtttatcaactaaaaggatctgtttgaaactt |
30542731 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #16
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 221 - 254
Target Start/End: Complemental strand, 2909288 - 2909255
Alignment:
Q |
221 |
tttttgaaacttaaaggactaacttgagaattct |
254 |
Q |
|
|
||||||||| |||||||||||||||||||||||| |
|
|
T |
2909288 |
tttttgaaatttaaaggactaacttgagaattct |
2909255 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #17
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 191 - 232
Target Start/End: Original strand, 8408832 - 8408873
Alignment:
Q |
191 |
cggtgaaatagtttatcaactaaaaggacctttttgaaactt |
232 |
Q |
|
|
||||||||||||||||||||||| | ||||| |||||||||| |
|
|
T |
8408832 |
cggtgaaatagtttatcaactaagatgacctatttgaaactt |
8408873 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #18
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 151 - 184
Target Start/End: Original strand, 26329993 - 26330026
Alignment:
Q |
151 |
tcaaactaaaaggacctatttaaaacttttgaaa |
184 |
Q |
|
|
||||||||||||||||||||| |||||||||||| |
|
|
T |
26329993 |
tcaaactaaaaggacctatttgaaacttttgaaa |
26330026 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #19
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 151 - 184
Target Start/End: Complemental strand, 41735890 - 41735857
Alignment:
Q |
151 |
tcaaactaaaaggacctatttaaaacttttgaaa |
184 |
Q |
|
|
||||||||||||||||||||| |||||||||||| |
|
|
T |
41735890 |
tcaaactaaaaggacctatttgaaacttttgaaa |
41735857 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #20
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 222 - 254
Target Start/End: Original strand, 2788987 - 2789019
Alignment:
Q |
222 |
ttttgaaacttaaaggactaacttgagaattct |
254 |
Q |
|
|
|||||||||||||||||||||||||| |||||| |
|
|
T |
2788987 |
ttttgaaacttaaaggactaacttgaaaattct |
2789019 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #21
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 192 - 228
Target Start/End: Complemental strand, 19681340 - 19681304
Alignment:
Q |
192 |
ggtgaaatagtttatcaactaaaaggacctttttgaa |
228 |
Q |
|
|
|||||||||||||||||||||||| ||||| |||||| |
|
|
T |
19681340 |
ggtgaaatagtttatcaactaaaatgacctatttgaa |
19681304 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #22
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 222 - 254
Target Start/End: Original strand, 26330019 - 26330051
Alignment:
Q |
222 |
ttttgaaacttaaaggactaacttgagaattct |
254 |
Q |
|
|
||||||||||||||||||||||||| ||||||| |
|
|
T |
26330019 |
ttttgaaacttaaaggactaacttgggaattct |
26330051 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #23
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 222 - 254
Target Start/End: Complemental strand, 31229367 - 31229335
Alignment:
Q |
222 |
ttttgaaacttaaaggactaacttgagaattct |
254 |
Q |
|
|
|||||||||||||| |||||||||||||||||| |
|
|
T |
31229367 |
ttttgaaacttaaatgactaacttgagaattct |
31229335 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #24
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 222 - 254
Target Start/End: Complemental strand, 52181827 - 52181795
Alignment:
Q |
222 |
ttttgaaacttaaaggactaacttgagaattct |
254 |
Q |
|
|
||||||||||||||||||||||||| ||||||| |
|
|
T |
52181827 |
ttttgaaacttaaaggactaacttgggaattct |
52181795 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #25
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 222 - 254
Target Start/End: Original strand, 52568207 - 52568239
Alignment:
Q |
222 |
ttttgaaacttaaaggactaacttgagaattct |
254 |
Q |
|
|
||||||||||||||||||| ||||||||||||| |
|
|
T |
52568207 |
ttttgaaacttaaaggactgacttgagaattct |
52568239 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8 (Bit Score: 64; Significance: 5e-28; HSPs: 26)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 149 - 232
Target Start/End: Original strand, 9770725 - 9770808
Alignment:
Q |
149 |
tttcaaactaaaaggacctatttaaaacttttgaaatggtgacggtgaaatagtttatcaactaaaaggacctttttgaaactt |
232 |
Q |
|
|
|||||||||||||||| |||||| ||||||||||||| |||| |||||||||||||||||||||||||||||| |||||||||| |
|
|
T |
9770725 |
tttcaaactaaaaggatctatttgaaacttttgaaatagtgatggtgaaatagtttatcaactaaaaggacctatttgaaactt |
9770808 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #2
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 147 - 246
Target Start/End: Complemental strand, 11113737 - 11113638
Alignment:
Q |
147 |
agtttcaaactaaaaggacctatttaaaacttttgaaatggtgacggtgaaatagtttatcaactaaaaggacctttttgaaacttaaaggactaacttg |
246 |
Q |
|
|
||||||||||||||| ||| ||||| || ||||||||| ||||||| |||||||||||||||||||||| || | |||||||||||||||||||||||| |
|
|
T |
11113737 |
agtttcaaactaaaatgacatatttgaagcttttgaaacggtgacgatgaaatagtttatcaactaaaataacttatttgaaacttaaaggactaacttg |
11113638 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #3
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 147 - 232
Target Start/End: Complemental strand, 36360096 - 36360011
Alignment:
Q |
147 |
agtttcaaactaaaaggacctatttaaaacttttgaaatggtgacggtgaaatagtttatcaactaaaaggacctttttgaaactt |
232 |
Q |
|
|
|||||||||||||||||| ||||| |||||||||||| ||||||||| |||||||||||||||||||| ||||| |||||||||| |
|
|
T |
36360096 |
agtttcaaactaaaaggatttatttgaaacttttgaaacggtgacggtaaaatagtttatcaactaaaatgacctatttgaaactt |
36360011 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #4
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 196 - 252
Target Start/End: Original strand, 14871342 - 14871398
Alignment:
Q |
196 |
aaatagtttatcaactaaaaggacctttttgaaacttaaaggactaacttgagaatt |
252 |
Q |
|
|
|||||||||||||||||||||||||| |||||||||||||||||||| ||||||||| |
|
|
T |
14871342 |
aaatagtttatcaactaaaaggacctatttgaaacttaaaggactaatttgagaatt |
14871398 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #5
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 149 - 229
Target Start/End: Complemental strand, 45017940 - 45017860
Alignment:
Q |
149 |
tttcaaactaaaaggacctatttaaaacttttgaaatggtgacggtgaaatagtttatcaactaaaaggacctttttgaaa |
229 |
Q |
|
|
||||||||||||| ||||||||| |||| ||||||| |||||||||||||||||||||||| ||||| ||| | ||||||| |
|
|
T |
45017940 |
tttcaaactaaaatgacctatttgaaacctttgaaacggtgacggtgaaatagtttatcaattaaaatgacttatttgaaa |
45017860 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #6
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 147 - 232
Target Start/End: Original strand, 29794196 - 29794280
Alignment:
Q |
147 |
agtttcaaactaaaaggacctatttaaaacttttgaaatggtgacggtgaaatagtttatcaactaaaaggacctttttgaaactt |
232 |
Q |
|
|
||||||||| ||||| ||| ||||| |||| ||| ||| ||||||||||||||| ||||||||||||||||| || |||||||||| |
|
|
T |
29794196 |
agtttcaaagtaaaaagacttatttgaaaccttt-aaacggtgacggtgaaataatttatcaactaaaaggatctatttgaaactt |
29794280 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #7
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 198 - 254
Target Start/End: Complemental strand, 23179122 - 23179066
Alignment:
Q |
198 |
atagtttatcaactaaaaggacctttttgaaacttaaaggactaacttgagaattct |
254 |
Q |
|
|
|||||||||||||||||| ||||| ||||||||||||||||||||||| ||||||| |
|
|
T |
23179122 |
atagtttatcaactaaaacgacctacttgaaacttaaaggactaacttgggaattct |
23179066 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #8
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 190 - 254
Target Start/End: Original strand, 40553228 - 40553292
Alignment:
Q |
190 |
acggtgaaatagtttatcaactaaaaggacctttttgaaacttaaaggactaacttgagaattct |
254 |
Q |
|
|
|||||||||||||||||||| ||||| || || ||||||||||||| || ||||||||||||||| |
|
|
T |
40553228 |
acggtgaaatagtttatcaagtaaaatgatctatttgaaacttaaatgattaacttgagaattct |
40553292 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #9
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 208 - 254
Target Start/End: Complemental strand, 9770686 - 9770640
Alignment:
Q |
208 |
aactaaaaggacctttttgaaacttaaaggactaacttgagaattct |
254 |
Q |
|
|
|||||||||||||| ||||||||||||| |||||||||||||||||| |
|
|
T |
9770686 |
aactaaaaggacctatttgaaacttaaatgactaacttgagaattct |
9770640 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #10
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 20 - 133
Target Start/End: Complemental strand, 43221159 - 43221046
Alignment:
Q |
20 |
caagatgatgcatattggcgtcaacgtgccaagactcattggtaccgggatggagactgcaacacaaaatttttccatgcatcagccaccgctaggaaga |
119 |
Q |
|
|
|||||||||| |||||||||||||| || || || ||||||||||| ||||||||| || || |||||||| |||||||||| || |||||||| | |
|
|
T |
43221159 |
caagatgatgtgtattggcgtcaacgggcaaaaacccattggtaccgagatggagaccaaaatacgaaattttttcatgcatcagttactgctaggaaaa |
43221060 |
T |
|
Q |
120 |
agttaaattgtatt |
133 |
Q |
|
|
|| ||||| ||||| |
|
|
T |
43221059 |
aggtaaatcgtatt |
43221046 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #11
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 193 - 232
Target Start/End: Complemental strand, 9276632 - 9276593
Alignment:
Q |
193 |
gtgaaatagtttatcaactaaaaggacctttttgaaactt |
232 |
Q |
|
|
||||||||||||||||||||||||||||| |||||||||| |
|
|
T |
9276632 |
gtgaaatagtttatcaactaaaaggacctatttgaaactt |
9276593 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #12
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 190 - 232
Target Start/End: Complemental strand, 23553507 - 23553465
Alignment:
Q |
190 |
acggtgaaatagtttatcaactaaaaggacctttttgaaactt |
232 |
Q |
|
|
|||||||||||||||||||||||||| ||||| |||||||||| |
|
|
T |
23553507 |
acggtgaaatagtttatcaactaaaatgacctatttgaaactt |
23553465 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #13
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 190 - 232
Target Start/End: Original strand, 34686878 - 34686920
Alignment:
Q |
190 |
acggtgaaatagtttatcaactaaaaggacctttttgaaactt |
232 |
Q |
|
|
|||||||||||||||||||||||||||||||| ||| |||||| |
|
|
T |
34686878 |
acggtgaaatagtttatcaactaaaaggacctatttaaaactt |
34686920 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #14
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 194 - 246
Target Start/End: Original strand, 6236222 - 6236274
Alignment:
Q |
194 |
tgaaatagtttatcaactaaaaggacctttttgaaacttaaaggactaacttg |
246 |
Q |
|
|
||||||||||| |||| ||||| ||||| |||||||||||||| ||||||||| |
|
|
T |
6236222 |
tgaaatagtttttcaattaaaatgacctatttgaaacttaaagtactaacttg |
6236274 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #15
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 154 - 184
Target Start/End: Complemental strand, 5358717 - 5358687
Alignment:
Q |
154 |
aactaaaaggacctatttaaaacttttgaaa |
184 |
Q |
|
|
||||||||||||||||||||||||||||||| |
|
|
T |
5358717 |
aactaaaaggacctatttaaaacttttgaaa |
5358687 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #16
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 222 - 252
Target Start/End: Complemental strand, 8713897 - 8713867
Alignment:
Q |
222 |
ttttgaaacttaaaggactaacttgagaatt |
252 |
Q |
|
|
||||||||||||||||||||||||||||||| |
|
|
T |
8713897 |
ttttgaaacttaaaggactaacttgagaatt |
8713867 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #17
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 190 - 232
Target Start/End: Original strand, 9276965 - 9277006
Alignment:
Q |
190 |
acggtgaaatagtttatcaactaaaaggacctttttgaaactt |
232 |
Q |
|
|
|||||||||||||||||||||||||| ||||| |||||||||| |
|
|
T |
9276965 |
acggtgaaatagtttatcaactaaaa-gacctatttgaaactt |
9277006 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #18
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 194 - 232
Target Start/End: Original strand, 16208674 - 16208712
Alignment:
Q |
194 |
tgaaatagtttatcaactaaaaggacctttttgaaactt |
232 |
Q |
|
|
|||||||||||||||||||||||||| | |||||||||| |
|
|
T |
16208674 |
tgaaatagtttatcaactaaaaggacatatttgaaactt |
16208712 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #19
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 190 - 232
Target Start/End: Complemental strand, 39701037 - 39700995
Alignment:
Q |
190 |
acggtgaaatagtttatcaactaaaaggacctttttgaaactt |
232 |
Q |
|
|
|||||||||||||||||||||||||| ||| | |||||||||| |
|
|
T |
39701037 |
acggtgaaatagtttatcaactaaaatgacatatttgaaactt |
39700995 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 195 - 232
Target Start/End: Complemental strand, 5358730 - 5358693
Alignment:
Q |
195 |
gaaatagtttatcaactaaaaggacctttttgaaactt |
232 |
Q |
|
|
||||||||||||||||||||||||||| ||| |||||| |
|
|
T |
5358730 |
gaaatagtttatcaactaaaaggacctatttaaaactt |
5358693 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 190 - 254
Target Start/End: Original strand, 30576640 - 30576713
Alignment:
Q |
190 |
acggtgaaatagtttatcaactaaaaggacct---------ttttgaaacttaaaggactaacttgagaattct |
254 |
Q |
|
|
|||||||||||||||||||||||||| ||| | ||||||||||||||||||||||||| ||||||| |
|
|
T |
30576640 |
acggtgaaatagtttatcaactaaaatgacatatttaaaacttttgaaacttaaaggactaacttgggaattct |
30576713 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #22
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 192 - 232
Target Start/End: Complemental strand, 13771508 - 13771468
Alignment:
Q |
192 |
ggtgaaatagtttatcaactaaaaggacctttttgaaactt |
232 |
Q |
|
|
||||||||||||||||||||||||| | || |||||||||| |
|
|
T |
13771508 |
ggtgaaatagtttatcaactaaaagaatctatttgaaactt |
13771468 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #23
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 222 - 254
Target Start/End: Original strand, 25730144 - 25730176
Alignment:
Q |
222 |
ttttgaaacttaaaggactaacttgagaattct |
254 |
Q |
|
|
|||||||| |||||||||||||||||||||||| |
|
|
T |
25730144 |
ttttgaaatttaaaggactaacttgagaattct |
25730176 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #24
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 222 - 254
Target Start/End: Original strand, 25737630 - 25737662
Alignment:
Q |
222 |
ttttgaaacttaaaggactaacttgagaattct |
254 |
Q |
|
|
|||||||| |||||||||||||||||||||||| |
|
|
T |
25737630 |
ttttgaaatttaaaggactaacttgagaattct |
25737662 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #25
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 193 - 229
Target Start/End: Original strand, 39701376 - 39701412
Alignment:
Q |
193 |
gtgaaatagtttatcaactaaaaggacctttttgaaa |
229 |
Q |
|
|
||||| ||||||||||||||||||||||| ||||||| |
|
|
T |
39701376 |
gtgaagtagtttatcaactaaaaggacctatttgaaa |
39701412 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #26
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 222 - 254
Target Start/End: Original strand, 39701474 - 39701506
Alignment:
Q |
222 |
ttttgaaacttaaaggactaacttgagaattct |
254 |
Q |
|
|
||||||||||||||| ||||||||||||||||| |
|
|
T |
39701474 |
ttttgaaacttaaagaactaacttgagaattct |
39701506 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0027 (Bit Score: 54; Significance: 5e-22; HSPs: 1)
Name: scaffold0027
Description:
Target: scaffold0027; HSP #1
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 193 - 254
Target Start/End: Complemental strand, 9535 - 9474
Alignment:
Q |
193 |
gtgaaatagtttatcaactaaaaggacctttttgaaacttaaaggactaacttgagaattct |
254 |
Q |
|
|
||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||||||| |
|
|
T |
9535 |
gtgaaatagtttatcaactaaaaggacctatttgaaacttaaagaactaacttgagaattct |
9474 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0019 (Bit Score: 54; Significance: 5e-22; HSPs: 1)
Name: scaffold0019
Description:
Target: scaffold0019; HSP #1
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 147 - 220
Target Start/End: Original strand, 124254 - 124327
Alignment:
Q |
147 |
agtttcaaactaaaaggacctatttaaaacttttgaaatggtgacggtgaaatagtttatcaactaaaaggacc |
220 |
Q |
|
|
||||||||||||||| ||||||||| ||| |||||||| ||||| ||||||||||||||||||||||||||||| |
|
|
T |
124254 |
agtttcaaactaaaatgacctatttgaaatttttgaaacggtgatggtgaaatagtttatcaactaaaaggacc |
124327 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3 (Bit Score: 54; Significance: 5e-22; HSPs: 12)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 147 - 232
Target Start/End: Complemental strand, 54456807 - 54456722
Alignment:
Q |
147 |
agtttcaaactaaaaggacctatttaaaacttttgaaatggtgacggtgaaatagtttatcaactaaaaggacctttttgaaactt |
232 |
Q |
|
|
||||||||||||||| ||| ||||| |||||||||||| |||||||||||| ||||||||||||||||| ||| | |||||||||| |
|
|
T |
54456807 |
agtttcaaactaaaaagacttatttgaaacttttgaaacggtgacggtgaattagtttatcaactaaaatgacatatttgaaactt |
54456722 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #2
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 190 - 254
Target Start/End: Complemental strand, 14629369 - 14629305
Alignment:
Q |
190 |
acggtgaaatagtttatcaactaaaaggacctttttgaaacttaaaggactaacttgagaattct |
254 |
Q |
|
|
||||||||||| ||||||||||||||| |||| |||||||||||||||||||||||| ||||||| |
|
|
T |
14629369 |
acggtgaaataatttatcaactaaaagaacctatttgaaacttaaaggactaacttgggaattct |
14629305 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #3
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 191 - 254
Target Start/End: Original strand, 4276597 - 4276660
Alignment:
Q |
191 |
cggtgaaatagtttatcaactaaaaggacctttttgaaacttaaaggactaacttgagaattct |
254 |
Q |
|
|
||||||||||||||||||||||||| || || |||||||||||||||||||||||| ||||||| |
|
|
T |
4276597 |
cggtgaaatagtttatcaactaaaatgatctatttgaaacttaaaggactaacttgggaattct |
4276660 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #4
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 190 - 244
Target Start/End: Original strand, 3088073 - 3088127
Alignment:
Q |
190 |
acggtgaaatagtttatcaactaaaaggacctttttgaaacttaaaggactaact |
244 |
Q |
|
|
|||||||||||||||||||| ||||||||||| |||||||||||||||||||||| |
|
|
T |
3088073 |
acggtgaaatagtttatcaattaaaaggacctatttgaaacttaaaggactaact |
3088127 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #5
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 147 - 252
Target Start/End: Complemental strand, 5505700 - 5505595
Alignment:
Q |
147 |
agtttcaaactaaaaggacctatttaaaacttttgaaatggtgacggtgaaatagtttatcaactaaaaggacctttttgaaacttaaaggactaacttg |
246 |
Q |
|
|
|||||||||||||||| || ||||| |||||||| ||| | ||| ||||||| | |||||||||||||| ||||||||| |||| |||| || ||||||| |
|
|
T |
5505700 |
agtttcaaactaaaagaacttatttgaaactttttaaacgatgatggtgaaaaaatttatcaactaaaatgacctttttaaaacctaaatgagtaacttg |
5505601 |
T |
|
Q |
247 |
agaatt |
252 |
Q |
|
|
| |||| |
|
|
T |
5505600 |
aaaatt |
5505595 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #6
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 190 - 252
Target Start/End: Original strand, 35555954 - 35556016
Alignment:
Q |
190 |
acggtgaaatagtttatcaactaaaaggacctttttgaaacttaaaggactaacttgagaatt |
252 |
Q |
|
|
||||||||||||||||| |||||||| ||||| |||||||||||||||| ||||||| ||||| |
|
|
T |
35555954 |
acggtgaaatagtttattaactaaaatgacctatttgaaacttaaaggattaacttgggaatt |
35556016 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #7
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 190 - 238
Target Start/End: Original strand, 21376990 - 21377038
Alignment:
Q |
190 |
acggtgaaatagtttatcaactaaaaggacctttttgaaacttaaagga |
238 |
Q |
|
|
||||||||||||||||| |||||||||||||| |||||||||||||||| |
|
|
T |
21376990 |
acggtgaaatagtttataaactaaaaggacctatttgaaacttaaagga |
21377038 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #8
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 192 - 243
Target Start/End: Original strand, 33975069 - 33975120
Alignment:
Q |
192 |
ggtgaaatagtttatcaactaaaaggacctttttgaaacttaaaggactaac |
243 |
Q |
|
|
||||||||| ||||||||||||||| |||| ||||||||||||||||||||| |
|
|
T |
33975069 |
ggtgaaataatttatcaactaaaagaacctatttgaaacttaaaggactaac |
33975120 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #9
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 147 - 200
Target Start/End: Original strand, 14964776 - 14964829
Alignment:
Q |
147 |
agtttcaaactaaaaggacctatttaaaacttttgaaatggtgacggtgaaata |
200 |
Q |
|
|
|||||||||||||||||||| | || |||||||||||| ||||||||||||||| |
|
|
T |
14964776 |
agtttcaaactaaaaggaccaagttgaaacttttgaaacggtgacggtgaaata |
14964829 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #10
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 193 - 254
Target Start/End: Complemental strand, 50530386 - 50530326
Alignment:
Q |
193 |
gtgaaatagtttatcaactaaaaggacctttttgaaacttaaaggactaacttgagaattct |
254 |
Q |
|
|
||||||||||||||||| ||||| ||||| ||| |||||| |||||| || ||||||||||| |
|
|
T |
50530386 |
gtgaaatagtttatcaattaaaatgacctatttaaaactt-aaggacaaatttgagaattct |
50530326 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #11
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 35 - 123
Target Start/End: Original strand, 14478808 - 14478896
Alignment:
Q |
35 |
tggcgtcaacgtgccaagactcattggtaccgggatggagactgcaacacaaaatttttccatgcatcagccaccgctaggaagaagtt |
123 |
Q |
|
|
||||| |||||||| || |||||||||| || ||||| ||| | ||||| |||||||| || || |||||||| || ||||||||||| |
|
|
T |
14478808 |
tggcggcaacgtgctaaagctcattggtatcgagatggtgaccggaacacgaaattttttcacgcttcagccactgcaaggaagaagtt |
14478896 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #12
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 20 - 120
Target Start/End: Original strand, 44492146 - 44492246
Alignment:
Q |
20 |
caagatgatgcatattggcgtcaacgtgccaagactcattggtaccgggatggagactgcaacacaaaatttttccatgcatcagccaccgctaggaaga |
119 |
Q |
|
|
||||||||||| |||||||| || || || || || |||||||| | ||||| | | | ||||| ||||| |||||||| || |||||||||||||||| |
|
|
T |
44492146 |
caagatgatgcgtattggcgccagcgggctaaaacccattggtatagagatggtggccgtaacacgaaattcttccatgcctctgccaccgctaggaaga |
44492245 |
T |
|
Q |
120 |
a |
120 |
Q |
|
|
| |
|
|
T |
44492246 |
a |
44492246 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1 (Bit Score: 54; Significance: 5e-22; HSPs: 14)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 147 - 232
Target Start/End: Complemental strand, 1765889 - 1765804
Alignment:
Q |
147 |
agtttcaaactaaaaggacctatttaaaacttttgaaatggtgacggtgaaatagtttatcaactaaaaggacctttttgaaactt |
232 |
Q |
|
|
|||||||||||||||||| ||||| ||||||||||| ||||||||||||||||||||||||||||||||| || ||| |||||| |
|
|
T |
1765889 |
agtttcaaactaaaaggagatatttgaaacttttgaatcggtgacggtgaaatagtttatcaactaaaaggatctatttaaaactt |
1765804 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #2
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 193 - 254
Target Start/End: Original strand, 49650984 - 49651045
Alignment:
Q |
193 |
gtgaaatagtttatcaactaaaaggacctttttgaaacttaaaggactaacttgagaattct |
254 |
Q |
|
|
|||||||||||||||||||||| |||||| |||||||||||||||||||||||||||||||| |
|
|
T |
49650984 |
gtgaaatagtttatcaactaaagggacctatttgaaacttaaaggactaacttgagaattct |
49651045 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #3
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 2 - 137
Target Start/End: Original strand, 41329266 - 41329401
Alignment:
Q |
2 |
atgcagcgcttactagctcaagatgatgcatattggcgtcaacgtgccaagactcattggtaccgggatggagactgcaacacaaaatttttccatgcat |
101 |
Q |
|
|
|||||||| ||| || ||||||||||||| || ||| |||||| ||| |||||||||| |||| ||||||||||| |||||| |||||||||||||| | |
|
|
T |
41329266 |
atgcagcgtttattatctcaagatgatgcttactggtgtcaacctgcaaagactcattagtacagggatggagaccacaacaccaaatttttccatgctt |
41329365 |
T |
|
Q |
102 |
cagccaccgctaggaagaagttaaattgtattattt |
137 |
Q |
|
|
| || || ||||| |||||| ||||| |||||||| |
|
|
T |
41329366 |
ccgctacggctagaaagaaggtaaatcatattattt |
41329401 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #4
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 193 - 254
Target Start/End: Original strand, 27351518 - 27351579
Alignment:
Q |
193 |
gtgaaatagtttatcaactaaaaggacctttttgaaacttaaaggactaacttgagaattct |
254 |
Q |
|
|
||||||||||||||||| |||||| |||| |||||||||||||||||||| ||||||||||| |
|
|
T |
27351518 |
gtgaaatagtttatcaagtaaaagcacctatttgaaacttaaaggactaatttgagaattct |
27351579 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #5
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 193 - 254
Target Start/End: Complemental strand, 49650715 - 49650653
Alignment:
Q |
193 |
gtgaaatagtttatcaactaaaaggacctttttgaaactt-aaaggactaacttgagaattct |
254 |
Q |
|
|
||||||| |||||||||||||||| |||| |||||||||| |||||||||||||||||||||| |
|
|
T |
49650715 |
gtgaaatggtttatcaactaaaagaacctatttgaaacttaaaaggactaacttgagaattct |
49650653 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #6
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 190 - 246
Target Start/End: Complemental strand, 10685992 - 10685936
Alignment:
Q |
190 |
acggtgaaatagtttatcaactaaaaggacctttttgaaacttaaaggactaacttg |
246 |
Q |
|
|
||||| |||||||||||||||||||| ||| | |||||||||||||||||||||||| |
|
|
T |
10685992 |
acggtaaaatagtttatcaactaaaatgacatatttgaaacttaaaggactaacttg |
10685936 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #7
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 196 - 252
Target Start/End: Complemental strand, 4772249 - 4772193
Alignment:
Q |
196 |
aaatagtttatcaactaaaaggacctttttgaaacttaaaggactaacttgagaatt |
252 |
Q |
|
|
||||||||||||||||||||| || | ||||||||||||||||||| |||| ||||| |
|
|
T |
4772249 |
aaatagtttatcaactaaaagaacttatttgaaacttaaaggactaccttgtgaatt |
4772193 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #8
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 194 - 246
Target Start/End: Original strand, 4772621 - 4772673
Alignment:
Q |
194 |
tgaaatagtttatcaactaaaaggacctttttgaaacttaaaggactaacttg |
246 |
Q |
|
|
||||||||||||||||||||||| | | |||||||||||||||||||||||| |
|
|
T |
4772621 |
tgaaatagtttatcaactaaaagaatttatttgaaacttaaaggactaacttg |
4772673 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #9
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 192 - 254
Target Start/End: Original strand, 4030726 - 4030788
Alignment:
Q |
192 |
ggtgaaatagtttatcaactaaaaggacctttttgaaacttaaaggactaacttgagaattct |
254 |
Q |
|
|
|||||||||||||| ||||||||| ||||| |||||||||||| ||| || ||||| |||||| |
|
|
T |
4030726 |
ggtgaaatagtttaccaactaaaatgacctatttgaaacttaagggattagcttgaaaattct |
4030788 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #10
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 190 - 232
Target Start/End: Original strand, 10686685 - 10686727
Alignment:
Q |
190 |
acggtgaaatagtttatcaactaaaaggacctttttgaaactt |
232 |
Q |
|
|
|||||||||||||||||||||||||| ||||| |||||||||| |
|
|
T |
10686685 |
acggtgaaatagtttatcaactaaaatgacctatttgaaactt |
10686727 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #11
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 191 - 232
Target Start/End: Complemental strand, 48352352 - 48352311
Alignment:
Q |
191 |
cggtgaaatagtttatcaactaaaaggacctttttgaaactt |
232 |
Q |
|
|
|||||||||||||||||||||||||| |||| |||||||||| |
|
|
T |
48352352 |
cggtgaaatagtttatcaactaaaagaacctatttgaaactt |
48352311 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #12
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 190 - 252
Target Start/End: Complemental strand, 27351204 - 27351133
Alignment:
Q |
190 |
acggtgaaatagtttatcaactaaaaggacct---------ttttgaaacttaaaggactaacttgagaatt |
252 |
Q |
|
|
|||||||||||||||||||||||||| ||| | ||||||||||||||||||||||||||||||| |
|
|
T |
27351204 |
acggtgaaatagtttatcaactaaaatgacttatttgatacttttgaaacttaaaggactaacttgagaatt |
27351133 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #13
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 178 - 211
Target Start/End: Complemental strand, 44964004 - 44963971
Alignment:
Q |
178 |
tttgaaatggtgacggtgaaatagtttatcaact |
211 |
Q |
|
|
||||||| |||||||||||||||||||||||||| |
|
|
T |
44964004 |
tttgaaacggtgacggtgaaatagtttatcaact |
44963971 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #14
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 151 - 183
Target Start/End: Complemental strand, 34254577 - 34254545
Alignment:
Q |
151 |
tcaaactaaaaggacctatttaaaacttttgaa |
183 |
Q |
|
|
|||||||||||||| |||||||||||||||||| |
|
|
T |
34254577 |
tcaaactaaaaggatctatttaaaacttttgaa |
34254545 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5 (Bit Score: 52; Significance: 8e-21; HSPs: 21)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 147 - 230
Target Start/End: Original strand, 6336255 - 6336338
Alignment:
Q |
147 |
agtttcaaactaaaaggacctatttaaaacttttgaaatggtgacggtgaaatagtttatcaactaaaaggacctttttgaaac |
230 |
Q |
|
|
|||||||||| ||||||||||||| |||||||| ||| |||||||||||||||||||||||||| ||||||| | |||||||| |
|
|
T |
6336255 |
agtttcaaacataaaggacctatttgaaacttttaaaacggtgacggtgaaatagtttatcaactgaaaggacatatttgaaac |
6336338 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #2
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 193 - 252
Target Start/End: Complemental strand, 36418027 - 36417968
Alignment:
Q |
193 |
gtgaaatagtttatcaactaaaaggacctttttgaaacttaaaggactaacttgagaatt |
252 |
Q |
|
|
|||||||| |||||||||||||||||||| |||||||||||||||||||||||||||||| |
|
|
T |
36418027 |
gtgaaataatttatcaactaaaaggacctatttgaaacttaaaggactaacttgagaatt |
36417968 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #3
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 193 - 246
Target Start/End: Complemental strand, 35190054 - 35190001
Alignment:
Q |
193 |
gtgaaatagtttatcaactaaaaggacctttttgaaacttaaaggactaacttg |
246 |
Q |
|
|
||||||||||||||||||||||| || ||||||||||||||||||||||||||| |
|
|
T |
35190054 |
gtgaaatagtttatcaactaaaatgatctttttgaaacttaaaggactaacttg |
35190001 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #4
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 190 - 246
Target Start/End: Original strand, 26275979 - 26276035
Alignment:
Q |
190 |
acggtgaaatagtttatcaactaaaaggacctttttgaaacttaaaggactaacttg |
246 |
Q |
|
|
|||||||||||| ||||||||||||||||| | |||||||||||||||||||||||| |
|
|
T |
26275979 |
acggtgaaatagcttatcaactaaaaggacatatttgaaacttaaaggactaacttg |
26276035 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #5
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 193 - 254
Target Start/End: Complemental strand, 38082697 - 38082636
Alignment:
Q |
193 |
gtgaaatagtttatcaactaaaaggacctttttgaaacttaaaggactaacttgagaattct |
254 |
Q |
|
|
||||||||||||||||||||||| ||||| ||| ||| ||||| |||||||||||||||||| |
|
|
T |
38082697 |
gtgaaatagtttatcaactaaaatgacctatttaaaatttaaaagactaacttgagaattct |
38082636 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #6
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 147 - 215
Target Start/End: Original strand, 32660371 - 32660439
Alignment:
Q |
147 |
agtttcaaactaaaaggacctatttaaaacttttgaaatggtgacggtgaaatagtttatcaactaaaa |
215 |
Q |
|
|
|||||||||||||| |||| ||||| |||||||| ||| |||||| |||||||||||||||||||||| |
|
|
T |
32660371 |
agtttcaaactaaatggacttatttgaaacttttaaaacggtgacactgaaatagtttatcaactaaaa |
32660439 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #7
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 190 - 232
Target Start/End: Original strand, 36418371 - 36418413
Alignment:
Q |
190 |
acggtgaaatagtttatcaactaaaaggacctttttgaaactt |
232 |
Q |
|
|
|||||||||||||||||||||||||||||||| |||||||||| |
|
|
T |
36418371 |
acggtgaaatagtttatcaactaaaaggacctatttgaaactt |
36418413 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #8
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 190 - 240
Target Start/End: Original strand, 38405518 - 38405568
Alignment:
Q |
190 |
acggtgaaatagtttatcaactaaaaggacctttttgaaacttaaaggact |
240 |
Q |
|
|
|||||||||||||||||||||||||||||| | ||| |||||||||||||| |
|
|
T |
38405518 |
acggtgaaatagtttatcaactaaaaggacatatttaaaacttaaaggact |
38405568 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #9
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 192 - 232
Target Start/End: Original strand, 20729017 - 20729057
Alignment:
Q |
192 |
ggtgaaatagtttatcaactaaaaggacctttttgaaactt |
232 |
Q |
|
|
|||||||||||||||||||||||||||||| |||||||||| |
|
|
T |
20729017 |
ggtgaaatagtttatcaactaaaaggacctatttgaaactt |
20729057 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #10
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 194 - 253
Target Start/End: Complemental strand, 26275644 - 26275585
Alignment:
Q |
194 |
tgaaatagtttatcaactaaaaggacctttttgaaacttaaaggactaacttgagaattc |
253 |
Q |
|
|
||||||||||| ||||||||||| |||| |||||||||| || |||||||||| |||||| |
|
|
T |
26275644 |
tgaaatagtttgtcaactaaaagaacctatttgaaacttgaatgactaacttgggaattc |
26275585 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #11
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 192 - 254
Target Start/End: Original strand, 5734954 - 5735024
Alignment:
Q |
192 |
ggtgaaatagtttatcaactaaaaggacctttttga--------aacttaaaggactaacttgagaattct |
254 |
Q |
|
|
|||||||||||||||||||||||| ||||| ||||| ||||||||||||||||||||||||||| |
|
|
T |
5734954 |
ggtgaaatagtttatcaactaaaatgacctatttgaaacttttgaacttaaaggactaacttgagaattct |
5735024 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #12
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 190 - 235
Target Start/End: Complemental strand, 13538617 - 13538572
Alignment:
Q |
190 |
acggtgaaatagtttatcaactaaaaggacctttttgaaacttaaa |
235 |
Q |
|
|
|||||||||||||||||||||||||| ||| | ||||||||||||| |
|
|
T |
13538617 |
acggtgaaatagtttatcaactaaaatgacatatttgaaacttaaa |
13538572 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #13
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 149 - 184
Target Start/End: Complemental strand, 6336223 - 6336188
Alignment:
Q |
149 |
tttcaaactaaaaggacctatttaaaacttttgaaa |
184 |
Q |
|
|
||||||||||||| |||||||||||||||||||||| |
|
|
T |
6336223 |
tttcaaactaaaatgacctatttaaaacttttgaaa |
6336188 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #14
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 183 - 229
Target Start/End: Original strand, 32459819 - 32459865
Alignment:
Q |
183 |
aatggtgacggtgaaatagtttatcaactaaaaggacctttttgaaa |
229 |
Q |
|
|
|||||| || ||||||||||||||| ||||||||||||| ||||||| |
|
|
T |
32459819 |
aatggtaacagtgaaatagtttatcgactaaaaggacctatttgaaa |
32459865 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #15
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 222 - 252
Target Start/End: Complemental strand, 32660311 - 32660281
Alignment:
Q |
222 |
ttttgaaacttaaaggactaacttgagaatt |
252 |
Q |
|
|
||||||||||||||||||||||||||||||| |
|
|
T |
32660311 |
ttttgaaacttaaaggactaacttgagaatt |
32660281 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #16
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 190 - 252
Target Start/End: Original strand, 35190393 - 35190454
Alignment:
Q |
190 |
acggtgaaatagtttatcaactaaaaggacctttttgaaacttaaaggactaacttgagaatt |
252 |
Q |
|
|
|||||||||||||||||||||||||| |||| |||||||||||| ||| || ||||||||| |
|
|
T |
35190393 |
acggtgaaatagtttatcaactaaaaagacc-aattgaaacttaaaagacaaatttgagaatt |
35190454 |
T |
|
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #17
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 194 - 254
Target Start/End: Complemental strand, 18249107 - 18249038
Alignment:
Q |
194 |
tgaaatagtttatcaactaaaaggacct---------ttttgaaacttaaaggactaacttgagaattct |
254 |
Q |
|
|
|||||||||||||||||||||| ||||| |||||||||||||| |||||||||||||||||| |
|
|
T |
18249107 |
tgaaatagtttatcaactaaaaagacctatttaaaacttttgaaacttaaatgactaacttgagaattct |
18249038 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #18
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 151 - 184
Target Start/End: Complemental strand, 18951381 - 18951348
Alignment:
Q |
151 |
tcaaactaaaaggacctatttaaaacttttgaaa |
184 |
Q |
|
|
|||||||||||||| ||||||||||||||||||| |
|
|
T |
18951381 |
tcaaactaaaaggatctatttaaaacttttgaaa |
18951348 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #19
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 222 - 254
Target Start/End: Complemental strand, 18951355 - 18951323
Alignment:
Q |
222 |
ttttgaaacttaaaggactaacttgagaattct |
254 |
Q |
|
|
||||||||||||||||||||||||| ||||||| |
|
|
T |
18951355 |
ttttgaaacttaaaggactaacttgggaattct |
18951323 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #20
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 222 - 254
Target Start/End: Complemental strand, 18951415 - 18951383
Alignment:
Q |
222 |
ttttgaaacttaaaggactaacttgagaattct |
254 |
Q |
|
|
|||| |||||||||||||||||||||||||||| |
|
|
T |
18951415 |
ttttaaaacttaaaggactaacttgagaattct |
18951383 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #21
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 222 - 254
Target Start/End: Complemental strand, 20728640 - 20728608
Alignment:
Q |
222 |
ttttgaaacttaaaggactaacttgagaattct |
254 |
Q |
|
|
|||| |||||||||||||||||||||||||||| |
|
|
T |
20728640 |
ttttaaaacttaaaggactaacttgagaattct |
20728608 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0381 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 1)
Name: scaffold0381
Description:
Target: scaffold0381; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 18 - 121
Target Start/End: Original strand, 6939 - 7042
Alignment:
Q |
18 |
ctcaagatgatgcatattggcgtcaacgtgccaagactcattggtaccgggatggagactgcaacacaaaatttttccatgcatcagccaccgctaggaa |
117 |
Q |
|
|
||||||| ||||| |||||||| ||| | || |||||||||||||| || ||||| ||||| ||||| ||||| || |||||||| ||||| ||||| || |
|
|
T |
6939 |
ctcaagaagatgcttattggcggcaatgcgctaagactcattggtatcgagatggcgactgaaacacgaaattatttcatgcatctgccactgctagaaa |
7038 |
T |
|
Q |
118 |
gaag |
121 |
Q |
|
|
|||| |
|
|
T |
7039 |
gaag |
7042 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0746 (Bit Score: 32; Significance: 0.000000007; HSPs: 1)
Name: scaffold0746
Description:
Target: scaffold0746; HSP #1
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 193 - 232
Target Start/End: Original strand, 509 - 548
Alignment:
Q |
193 |
gtgaaatagtttatcaactaaaaggacctttttgaaactt |
232 |
Q |
|
|
||||||||||||||||||||||| ||||| |||||||||| |
|
|
T |
509 |
gtgaaatagtttatcaactaaaatgacctatttgaaactt |
548 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0070 (Bit Score: 32; Significance: 0.000000007; HSPs: 2)
Name: scaffold0070
Description:
Target: scaffold0070; HSP #1
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 193 - 232
Target Start/End: Complemental strand, 28694 - 28655
Alignment:
Q |
193 |
gtgaaatagtttatcaactaaaaggacctttttgaaactt |
232 |
Q |
|
|
||||||||||||||||||||||| ||||| |||||||||| |
|
|
T |
28694 |
gtgaaatagtttatcaactaaaatgacctatttgaaactt |
28655 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0070; HSP #2
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 193 - 245
Target Start/End: Original strand, 29033 - 29084
Alignment:
Q |
193 |
gtgaaatagtttatcaactaaaaggacctttttgaaacttaaaggactaactt |
245 |
Q |
|
|
|||||||| |||||||||||||| ||| | ||||||||||||| ||||||||| |
|
|
T |
29033 |
gtgaaataatttatcaactaaaatgacatatttgaaacttaaa-gactaactt |
29084 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0374 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0374
Description:
Target: scaffold0374; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 190 - 232
Target Start/End: Complemental strand, 16266 - 16224
Alignment:
Q |
190 |
acggtgaaatagtttatcaactaaaaggacctttttgaaactt |
232 |
Q |
|
|
|||||||||||||||||||||||||| ||||| ||| |||||| |
|
|
T |
16266 |
acggtgaaatagtttatcaactaaaatgacctatttaaaactt |
16224 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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