View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: J5_12_19 (Length: 158)
Name: J5_12_19
Description: Pascalseqs
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] J5_12_19 |
 | |
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Alignment Details
Target: chr8 (Bit Score: 130; Significance: 1e-67; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 130; E-Value: 1e-67
Query Start/End: Original strand, 1 - 134
Target Start/End: Complemental strand, 31600464 - 31600331
Alignment:
| Q |
1 |
tttttatggtctaaatttaacacaactaagccataaacctctttgagtaatcatgcctattctcacctctggagagccaaattgtttggacagttctgaa |
100 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
31600464 |
tttttatggtctaaatttaacacaactaagccataaacctctttgagtaaccatgcctattctcacctctggagagccaaattgtttggacagttctgaa |
31600365 |
T |
|
| Q |
101 |
acagagtttaatgggtactaccttgcctattaat |
134 |
Q |
| |
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|||||||||||||||||||||||||||||||||| |
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| T |
31600364 |
acagagtttaatgggtactaccttgcctattaat |
31600331 |
T |
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