View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
Legend |
| Query |
| Query hiting target |
| Query hiting target's complemental strand |
| Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: J5_14_71 (Length: 657)
Name: J5_14_71
Description: Pascalseqs
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
[»] J5_14_71 |
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[»] chr1 (37 HSPs) |
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[»] chr2 (23 HSPs) |
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[»] chr3 (32 HSPs) |
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[»] chr7 (40 HSPs) |
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[»] scaffold0472 (2 HSPs) |
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[»] chr8 (12 HSPs) |
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[»] scaffold0287 (1 HSPs) |
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[»] scaffold1504 (1 HSPs) |
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[»] scaffold0543 (1 HSPs) |
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[»] scaffold0042 (1 HSPs) |
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[»] scaffold0347 (1 HSPs) |
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[»] scaffold0306 (1 HSPs) |
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[»] scaffold0152 (1 HSPs) |
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Alignment Details
Target: chr1 (Bit Score: 313; Significance: 1e-176; HSPs: 37)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 313; E-Value: 1e-176
Query Start/End: Original strand, 324 - 657
Target Start/End: Original strand, 51826348 - 51826681
Alignment:
Q |
324 |
aattaataaattagaaaacaaattgactttnnnnnnntttacacatgaatctgcaattttgaaatacaagcatcagtatgtaacgtggacaacaaccttc |
423 |
Q |
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|||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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|
T |
51826348 |
aattaataaattagaaaacaaattgactttaaaaaaatttacacatgaatctgcaattttgaaatacaagcatcagtatgtaacgtggacaacaaccttc |
51826447 |
T |
|
Q |
424 |
ttaactggaacgagcacatcaacaatgagaagcaataatataaaaaattaaaagtgtacggtgtgaaattggaataattacgttgaaggagagtagaggc |
523 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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T |
51826448 |
ttaactggaacgagcacatcaacaatgagaagcaataatataaaaaattaaaagtgtacggtgtgaaattggaataattacgttgaaggagagtagaggc |
51826547 |
T |
|
Q |
524 |
tatgactctgagggcaagagacaaggatgaaacaaaagttatgaatgtctcaaaaagtctcaaggttttttgtgagattgttgaatgagcatttcatgtg |
623 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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T |
51826548 |
tatgactctgagggcaagagacaaggatgaaacaaaagttatgaatgtctcaaaaagtctcaaggttttttgtgagattgttgaatgagcatttcatgtg |
51826647 |
T |
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Q |
624 |
tatttttaactaaaaagtctcacaaaatccactc |
657 |
Q |
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|||||||||||||||||||||||||||||||||| |
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|
T |
51826648 |
tatttttaactaaaaagtctcacaaaatccactc |
51826681 |
T |
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Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #2
Raw Score: 257; E-Value: 1e-143
Query Start/End: Original strand, 1 - 331
Target Start/End: Original strand, 51826677 - 51827004
Alignment:
Q |
1 |
cactctacaatagaatccattaaaatctcaagannnnnnnaataccaatagacattttataagttactataaattctcaaatgatgccatgggaattgat |
100 |
Q |
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||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||||| |
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T |
51826677 |
cactctacaatagaatccattaaaatctcaagatttttttaataccaatagacattttataagttactataaat-ctcaattgatgccatgggaattgat |
51826775 |
T |
|
Q |
101 |
tgccctggaataaaaaatcttgattgtcttngattcaatatcatgagatttatttatgttttataaaagtcttgattgaataccacaagannnnnnnatt |
200 |
Q |
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|||| || |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |
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|
T |
51826776 |
tgccttg-aataaaaaatcttgattgtctt-gattcaatatcatgagatttatttatgttttataaaagtcttgattgaataccacaagatttttttatt |
51826873 |
T |
|
Q |
201 |
attaaaaagtcttttaaaatcccttcaaatcttaattcaatacactctccttagtttatttctcaccatcatcaatgcaaacttatacatggtaattatc |
300 |
Q |
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|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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T |
51826874 |
attaaaaagtcttttaaaatcccttcaaatcttaattcaatacactctccttagtttatttctcaccatcatcaatgcaaacttatacatggtaattatc |
51826973 |
T |
|
Q |
301 |
agagggacacattgggaaaaaagaattaata |
331 |
Q |
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||||||||||||||||||||||||||||||| |
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|
T |
51826974 |
agagggacacattgggaaaaaagaattaata |
51827004 |
T |
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Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #3
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 553 - 657
Target Start/End: Complemental strand, 4289276 - 4289172
Alignment:
Q |
553 |
aaacaaaagttatgaatgtctcaaaaagtctcaaggttttttgtgagattgttgaatgagcatttcatgtgtatttttaactaaaaagtctcacaaaatc |
652 |
Q |
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|||||||| ||||| ||||| |||||||| |||| | |||||||||||||||||| ||||| | ||||||||||||| ||||||| |||||||||||| |
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T |
4289276 |
aaacaaaaattatgggagtctctaaaagtctgaaggatatttgtgagattgttgaataagcatcttatgtgtatttttagctaaaaattctcacaaaatc |
4289177 |
T |
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Q |
653 |
cactc |
657 |
Q |
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|
||||| |
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|
T |
4289176 |
cactc |
4289172 |
T |
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Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #4
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 146 - 245
Target Start/End: Original strand, 19007562 - 19007661
Alignment:
Q |
146 |
agatttatttatgttttataaaagtcttgattgaataccacaagannnnnnnattattaaaaagtcttttaaaatcccttcaaatcttaattcaatacac |
245 |
Q |
|
|
|||||| |||| |||||||||||||||||||||||||||| ||| ||||| |||||||||||||||||||||| |||||| |||||||||||| |
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|
T |
19007562 |
agatttgtttacattttataaaagtcttgattgaataccactagactttttcattataaaaaagtcttttaaaatcccttgaaatctcaattcaatacac |
19007661 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #5
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 112 - 245
Target Start/End: Complemental strand, 48203482 - 48203350
Alignment:
Q |
112 |
aaaaaatcttgattgtcttngattcaatatcatgagatttatttatgttttataaaagtcttgattgaataccacaagannnnnnnattattaaaaagtc |
211 |
Q |
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||||| || |||||||||| |||| |||| || |||||| ||||| |||||||||||||||||||||||||||| ||| ||| | |||||||| |
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T |
48203482 |
aaaaagtcatgattgtctt-gattgaataccacaagatttgtttatattttataaaagtcttgattgaataccactagactttttcattctaaaaaagtc |
48203384 |
T |
|
Q |
212 |
ttttaaaatcccttcaaatcttaattcaatacac |
245 |
Q |
|
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|||||||||||||| ||||| |||||||||||| |
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|
T |
48203383 |
ttttaaaatcccttgaaatcccaattcaatacac |
48203350 |
T |
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Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #6
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 570 - 657
Target Start/End: Original strand, 28039183 - 28039270
Alignment:
Q |
570 |
gtctcaaaaagtctcaaggttttttgtgagattgttgaatgagcatttcatgtgtatttttaactaaaaagtctcacaaaatccactc |
657 |
Q |
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|||||||||||||||||| | ||||||||||||||||||||| | | |||||||||||||| |||||||| ||||||||| ||||| |
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T |
28039183 |
gtctcaaaaagtctcaagaatatttgtgagattgttgaatgagtacgttatgtgtatttttaattaaaaagtttcacaaaattcactc |
28039270 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #7
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 575 - 657
Target Start/End: Complemental strand, 42055389 - 42055307
Alignment:
Q |
575 |
aaaaagtctcaaggttttttgtgagattgttgaatgagcatttcatgtgtatttttaactaaaaagtctcacaaaatccactc |
657 |
Q |
|
|
||||||||| ||||||||| ||||||||||||||||| |||| ||||||||||||||||||||| | | |||||||||||| |
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|
T |
42055389 |
aaaaagtcttgaggttttttttgagattgttgaatgagtattttatgtgtatttttaactaaaaatttttgcaaaatccactc |
42055307 |
T |
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Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #8
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 150 - 245
Target Start/End: Complemental strand, 42657811 - 42657716
Alignment:
Q |
150 |
ttatttatgttttataaaagtcttgattgaataccacaagannnnnnnattattaaaaagtcttttaaaatcccttcaaatcttaattcaatacac |
245 |
Q |
|
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|||||||| |||||| ||||||||||||||||||||||||| || ||||||||||||||||||||| ||| |||||| ||| |||||||| |
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|
T |
42657811 |
ttatttatattttatgaaagtcttgattgaataccacaagacttttttataattaaaaagtcttttaaaatctcttgaaatctcaatccaatacac |
42657716 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #9
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 146 - 251
Target Start/End: Complemental strand, 27198372 - 27198267
Alignment:
Q |
146 |
agatttatttatgttttataaaagtcttgattgaataccacaagannnnnnnattattaaaaagtcttttaaaatcccttcaaatcttaattcaatacac |
245 |
Q |
|
|
|||||||||||| |||||||||||| ||||||||||||||||||| || | |||||||||||||||||||||| || ||| ||| |||||||| |
|
|
T |
27198372 |
agatttatttatattttataaaagttttgattgaataccacaagacttttttataaacaaaaagtcttttaaaatcccttaaagtctcaatccaatacac |
27198273 |
T |
|
Q |
246 |
tctcct |
251 |
Q |
|
|
||||| |
|
|
T |
27198272 |
cctcct |
27198267 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #10
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 112 - 245
Target Start/End: Complemental strand, 48194724 - 48194592
Alignment:
Q |
112 |
aaaaaatcttgattgtcttngattcaatatcatgagatttatttatgttttataaaagtcttgattgaataccacaagannnnnnnattattaaaaagtc |
211 |
Q |
|
|
||||| || |||||||||| |||| |||| || |||||| |||| |||||||||||||||||||||||||||| ||| ||| | |||||||| |
|
|
T |
48194724 |
aaaaagtcatgattgtctt-gattgaataccacaagatttgtttagattttataaaagtcttgattgaataccactagactttttcattctaaaaaagtc |
48194626 |
T |
|
Q |
212 |
ttttaaaatcccttcaaatcttaattcaatacac |
245 |
Q |
|
|
|||||||||||||| ||||| |||||||||||| |
|
|
T |
48194625 |
ttttaaaatcccttgaaatcccaattcaatacac |
48194592 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #11
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 137 - 245
Target Start/End: Complemental strand, 19893561 - 19893453
Alignment:
Q |
137 |
aatatcatgagatttatttatgttttataaaagtcttgattgaataccacaagannnnnnnattattaaaaagtcttttaaaatcccttcaaatcttaat |
236 |
Q |
|
|
|||| ||||||||||||| || || ||||||| |||||||||||| ||||| || ||||||||||||||||||||||||| |||||||||| |
|
|
T |
19893561 |
aataccatgagatttattaatattctataaaaaatttgattgaatactccaagatttttttatcattaaaaagtcttttaaaatcccttaaaatcttaat |
19893462 |
T |
|
Q |
237 |
tcaatacac |
245 |
Q |
|
|
||||||||| |
|
|
T |
19893461 |
tcaatacac |
19893453 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #12
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 146 - 245
Target Start/End: Complemental strand, 43553637 - 43553538
Alignment:
Q |
146 |
agatttatttatgttttataaaagtcttgattgaataccacaagannnnnnnattattaaaaagtcttttaaaatcccttcaaatcttaattcaatacac |
245 |
Q |
|
|
||||||||||| ||||||||||||||| |||| ||||||||||| ||||| |||| |||| |||||||| ||| ||||||||||||||||||| |
|
|
T |
43553637 |
agatttatttaaattttataaaagtcttaattgtataccacaagacttttttattatgaaaatgtctattaaaatctcttgaaatcttaattcaatacac |
43553538 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #13
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 171 - 251
Target Start/End: Original strand, 35679369 - 35679449
Alignment:
Q |
171 |
cttgattgaataccacaagannnnnnnattattaaaaagtcttttaaaatcccttcaaatcttaattcaatacactctcct |
251 |
Q |
|
|
|||||||||||||||||||| ||||| |||||||||||||||||||||| ||||| | ||||||||||| ||||| |
|
|
T |
35679369 |
cttgattgaataccacaagactttttcattataaaaaagtcttttaaaatcccttaaaatcatgattcaatacaccctcct |
35679449 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #14
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 165 - 244
Target Start/End: Original strand, 8141363 - 8141442
Alignment:
Q |
165 |
aaaagtcttgattgaataccacaagannnnnnnattattaaaaagtcttttaaaatcccttcaaatcttaattcaataca |
244 |
Q |
|
|
|||||||||||||||||||||||||| || ||||||||||||||||||||||| | |||| |||||||||||| |
|
|
T |
8141363 |
aaaagtcttgattgaataccacaagactttttcataattaaaaagtcttttaaaatcccatagaatcctaattcaataca |
8141442 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #15
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 581 - 654
Target Start/End: Original strand, 19007349 - 19007422
Alignment:
Q |
581 |
tctcaaggttttttgtgagattgttgaatgagcatttcatgtgtatttttaactaaaaagtctcacaaaatcca |
654 |
Q |
|
|
|||||||| ||| ||||||||||||| ||||| | | || | ||||||||||||||||||||||||||||||| |
|
|
T |
19007349 |
tctcaagggtttgtgtgagattgttggatgagagtattatttatatttttaactaaaaagtctcacaaaatcca |
19007422 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #16
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 115 - 186
Target Start/End: Original strand, 14229004 - 14229074
Alignment:
Q |
115 |
aaatcttgattgtcttngattcaatatcatgagatttatttatgttttataaaagtcttgattgaataccac |
186 |
Q |
|
|
||||| |||||||||| |||||||| || ||||||| ||| | |||||||||||||||||||||||||||| |
|
|
T |
14229004 |
aaatcatgattgtctta-attcaataccacgagatttctttgtattttataaaagtcttgattgaataccac |
14229074 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #17
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 168 - 244
Target Start/End: Original strand, 9577670 - 9577746
Alignment:
Q |
168 |
agtcttgattgaataccacaagannnnnnnattattaaaaagtcttttaaaatcccttcaaatcttaattcaataca |
244 |
Q |
|
|
||||||||||||||||||||| | || |||||||||||||||||||||||||| |||| |||| ||||||| |
|
|
T |
9577670 |
agtcttgattgaataccacaaaactttttcatcattaaaaagtcttttaaaatcccttcgaatcctaatccaataca |
9577746 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #18
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 590 - 657
Target Start/End: Complemental strand, 27198577 - 27198510
Alignment:
Q |
590 |
tttttgtgagattgttgaatgagcatttcatgtgtatttttaactaaaaagtctcacaaaatccactc |
657 |
Q |
|
|
||||||||||||||||||||||| |||| | ||||||||||||| ||||||||||||||| |||| |
|
|
T |
27198577 |
tttttgtgagattgttgaatgagtattttgttcatatttttaactaagaagtctcacaaaatcaactc |
27198510 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #19
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 108 - 182
Target Start/End: Complemental strand, 4289071 - 4288998
Alignment:
Q |
108 |
gaataaaaaatcttgattgtcttngattcaatatcatgagatttatttatgttttataaaagtcttgattgaata |
182 |
Q |
|
|
||||||||| ||||||||||||| |||| |||| || ||||||||||| || ||||||||||||||||||||| |
|
|
T |
4289071 |
gaataaaaagtcttgattgtctt-gattgaataccacatgatttatttatattctataaaagtcttgattgaata |
4288998 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #20
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 165 - 244
Target Start/End: Complemental strand, 6312539 - 6312460
Alignment:
Q |
165 |
aaaagtcttgattgaataccacaagannnnnnnattattaaaaagtcttttaaaatcccttcaaatcttaattcaataca |
244 |
Q |
|
|
|||||||||||||||||||||||||| || ||||||||||||||||||||||| | |||| |||| ||||||| |
|
|
T |
6312539 |
aaaagtcttgattgaataccacaagactttttcataattaaaaagtcttttaaaatcccatagaatcctaatccaataca |
6312460 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #21
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 165 - 244
Target Start/End: Original strand, 9322735 - 9322814
Alignment:
Q |
165 |
aaaagtcttgattgaataccacaagannnnnnnattattaaaaagtcttttaaaatcccttcaaatcttaattcaataca |
244 |
Q |
|
|
|||||||||||||||||||||||||| || ||||||||||||||||||||||| | |||| |||| ||||||| |
|
|
T |
9322735 |
aaaagtcttgattgaataccacaagactttttcataattaaaaagtcttttaaaatcccatagaatcctaatccaataca |
9322814 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #22
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 165 - 244
Target Start/End: Original strand, 15835288 - 15835367
Alignment:
Q |
165 |
aaaagtcttgattgaataccacaagannnnnnnattattaaaaagtcttttaaaatcccttcaaatcttaattcaataca |
244 |
Q |
|
|
|||||||||||||||||||||||||| || ||||||||||||||||||||||| | |||| |||| ||||||| |
|
|
T |
15835288 |
aaaagtcttgattgaataccacaagactttttcataattaaaaagtcttttaaaatcccatagaatcctaatccaataca |
15835367 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #23
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 165 - 244
Target Start/End: Complemental strand, 25612122 - 25612043
Alignment:
Q |
165 |
aaaagtcttgattgaataccacaagannnnnnnattattaaaaagtcttttaaaatcccttcaaatcttaattcaataca |
244 |
Q |
|
|
|||||||||||||||||||||||||| || ||||||||||||||||||||||| | |||| |||| ||||||| |
|
|
T |
25612122 |
aaaagtcttgattgaataccacaagattttttcataattaaaaagtcttttaaaatcccatagaatcctaatccaataca |
25612043 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #24
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 204 - 245
Target Start/End: Original strand, 31622712 - 31622753
Alignment:
Q |
204 |
aaaaagtcttttaaaatcccttcaaatcttaattcaatacac |
245 |
Q |
|
|
||||| |||||||||||||||||||||| ||||||||||||| |
|
|
T |
31622712 |
aaaaaatcttttaaaatcccttcaaatcataattcaatacac |
31622753 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #25
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 153 - 222
Target Start/End: Original strand, 14555301 - 14555370
Alignment:
Q |
153 |
tttatgttttataaaagtcttgattgaataccacaagannnnnnnattattaaaaagtcttttaaaatcc |
222 |
Q |
|
|
||||| |||||||||||||||||||||||||||| | | ||||| ||||||||||||||||||| |
|
|
T |
14555301 |
tttatattttataaaagtcttgattgaataccaccaaacttttttattataaaaaagtcttttaaaatcc |
14555370 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #26
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 165 - 221
Target Start/End: Complemental strand, 18798456 - 18798400
Alignment:
Q |
165 |
aaaagtcttgattgaataccacaagannnnnnnattattaaaaagtcttttaaaatc |
221 |
Q |
|
|
|||||||||||||||||||||||||| || ||||||||||||||||||||| |
|
|
T |
18798456 |
aaaagtcttgattgaataccacaagacattttcataattaaaaagtcttttaaaatc |
18798400 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #27
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 599 - 654
Target Start/End: Complemental strand, 19894245 - 19894190
Alignment:
Q |
599 |
gattgttgaatgagcatttcatgtgtatttttaactaaaaagtctcacaaaatcca |
654 |
Q |
|
|
||||||||||||| ||| ||| ||||||||| ||||||||||| | |||||||||| |
|
|
T |
19894245 |
gattgttgaatgatcatgtcacgtgtattttcaactaaaaagttttacaaaatcca |
19894190 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #28
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 198 - 245
Target Start/End: Original strand, 39881195 - 39881242
Alignment:
Q |
198 |
attattaaaaagtcttttaaaatcccttcaaatcttaattcaatacac |
245 |
Q |
|
|
|||||||||||||||||||||||| || || |||||||||||||||| |
|
|
T |
39881195 |
attattaaaaagtcttttaaaatcatttgaagtcttaattcaatacac |
39881242 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #29
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 146 - 245
Target Start/End: Original strand, 28039390 - 28039489
Alignment:
Q |
146 |
agatttatttatgttttataaaagtcttgattgaataccacaagannnnnnnattattaaaaagtcttttaaaatcccttcaaatcttaattcaatacac |
245 |
Q |
|
|
|||||||||||| |||||||||||| || |||||||| | ||||| ||| ||||||| ||||||| |||||| | |||||| |||| ||||||| |
|
|
T |
28039390 |
agatttatttatattttataaaagttttaattgaatatctcaagacctttttatttttaaaaattcttttataatcccatgaaatctcaattgaatacac |
28039489 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #30
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 165 - 220
Target Start/End: Complemental strand, 29219253 - 29219198
Alignment:
Q |
165 |
aaaagtcttgattgaataccacaagannnnnnnattattaaaaagtcttttaaaat |
220 |
Q |
|
|
|||||||||||||||||||||||||| || |||||||||||||||||||| |
|
|
T |
29219253 |
aaaagtcttgattgaataccacaagactttttcataattaaaaagtcttttaaaat |
29219198 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #31
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 165 - 220
Target Start/End: Original strand, 29396623 - 29396678
Alignment:
Q |
165 |
aaaagtcttgattgaataccacaagannnnnnnattattaaaaagtcttttaaaat |
220 |
Q |
|
|
|||||||||||||||||||||||||| || |||||||||||||||||||| |
|
|
T |
29396623 |
aaaagtcttgattgaataccacaagactttttcataattaaaaagtcttttaaaat |
29396678 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #32
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 624 - 654
Target Start/End: Complemental strand, 48194862 - 48194832
Alignment:
Q |
624 |
tatttttaactaaaaagtctcacaaaatcca |
654 |
Q |
|
|
||||||||||||||||||||||||||||||| |
|
|
T |
48194862 |
tatttttaactaaaaagtctcacaaaatcca |
48194832 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #33
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 624 - 654
Target Start/End: Complemental strand, 48203620 - 48203590
Alignment:
Q |
624 |
tatttttaactaaaaagtctcacaaaatcca |
654 |
Q |
|
|
||||||||||||||||||||||||||||||| |
|
|
T |
48203620 |
tatttttaactaaaaagtctcacaaaatcca |
48203590 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #34
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 146 - 184
Target Start/End: Original strand, 52179674 - 52179712
Alignment:
Q |
146 |
agatttatttatgttttataaaagtcttgattgaatacc |
184 |
Q |
|
|
|||||||||||| ||||||||||||||| |||||||||| |
|
|
T |
52179674 |
agatttatttatattttataaaagtctttattgaatacc |
52179712 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 137 - 186
Target Start/End: Original strand, 8416410 - 8416459
Alignment:
Q |
137 |
aatatcatgagatttatttatgttttataaaagtcttgattgaataccac |
186 |
Q |
|
|
|||||||| ||| |||||||| |||||| ||||||||||||||| ||||| |
|
|
T |
8416410 |
aatatcataagacttatttattttttattaaagtcttgattgaacaccac |
8416459 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #36
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 165 - 223
Target Start/End: Original strand, 28387628 - 28387686
Alignment:
Q |
165 |
aaaagtcttgattgaataccacaagannnnnnnattattaaaaagtcttttaaaatccc |
223 |
Q |
|
|
||||||||||||||||||||| |||| || ||||||||||||||||||||||| |
|
|
T |
28387628 |
aaaagtcttgattgaataccataagactttttcataattaaaaagtcttttaaaatccc |
28387686 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #37
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 165 - 242
Target Start/End: Complemental strand, 42290809 - 42290732
Alignment:
Q |
165 |
aaaagtcttgattgaataccacaagannnnnnnattattaaaaagtcttttaaaatcccttcaaatcttaattcaata |
242 |
Q |
|
|
|||||| ||||||||||||||||||| || |||||||| |||||||||||||| | ||||||||| ||||| |
|
|
T |
42290809 |
aaaagttttgattgaataccacaagactttttcataattaaaaaatcttttaaaatcccatagaatcttaatccaata |
42290732 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2 (Bit Score: 180; Significance: 7e-97; HSPs: 23)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 180; E-Value: 7e-97
Query Start/End: Original strand, 454 - 657
Target Start/End: Original strand, 18176111 - 18176314
Alignment:
Q |
454 |
agcaataatataaaaaattaaaagtgtacggtgtgaaattggaataattacgttgaaggagagtagaggctatgactctgagggcaagagacaaggatga |
553 |
Q |
|
|
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| ||||||||||||||| |
|
|
T |
18176111 |
agcaataatataaaaacttaaaagtgtacggtgtgaaattggaataattacgttgaaggagagtagaggctatgactctaagggtaagagacaaggatga |
18176210 |
T |
|
Q |
554 |
aacaaaagttatgaatgtctcaaaaagtctcaaggttttttgtgagattgttgaatgagcatttcatgtgtatttttaactaaaaagtctcacaaaatcc |
653 |
Q |
|
|
||| |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| |
|
|
T |
18176211 |
aacgaaagttgtgaatgtctcaaaaagtctcaaggttttttgtgagattgttgaatgagcatatcatgtgtatttttaactaaaaagtctcacaaaatcc |
18176310 |
T |
|
Q |
654 |
actc |
657 |
Q |
|
|
|||| |
|
|
T |
18176311 |
actc |
18176314 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #2
Raw Score: 137; E-Value: 3e-71
Query Start/End: Original strand, 1 - 251
Target Start/End: Original strand, 18176310 - 18176557
Alignment:
Q |
1 |
cactctacaatagaatccattaaaatctcaagannnnnnnaataccaatagacattttataagttactataaattctcaaatga-tgccatgggaattga |
99 |
Q |
|
|
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| | |||||| |||||| ||| | ||||||||||||| |
|
|
T |
18176310 |
cactctacaatagaatccattaaaatctcaagaattttg-aataccaatagacattttataagatt-tataaaatctcaattgaataccatgggaattga |
18176407 |
T |
|
Q |
100 |
ttgccctggaataaaaaatcttgattgtcttngattcaatatcatgagatttatttatgttttataaaagtcttgattgaataccacaagannnnnnnat |
199 |
Q |
|
|
||||| || |||||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| || |
|
|
T |
18176408 |
ttgccttg-aataaaaaatcttgattgtctt-gattcaataccatgagatttatttatgttttataaaagtcttgattgaataccacaagatttttttat |
18176505 |
T |
|
Q |
200 |
tattaaaaagtcttttaaaatcccttcaaatcttaattcaatacactctcct |
251 |
Q |
|
|
||||||||| |||||||||||||||||||||||||||||||||||| ||||| |
|
|
T |
18176506 |
tattaaaaaatcttttaaaatcccttcaaatcttaattcaatacaccctcct |
18176557 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #3
Raw Score: 101; E-Value: 1e-49
Query Start/End: Original strand, 327 - 460
Target Start/End: Original strand, 18175950 - 18176083
Alignment:
Q |
327 |
taataaattagaaaacaaattgactttnnnnnnntttacacatgaatctgcaattttgaaatacaagcatcagtatgtaacgtggacaacaaccttctta |
426 |
Q |
|
|
||||||||||||||||||||||||||| |||||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||||||| |
|
|
T |
18175950 |
taataaattagaaaacaaattgactttaaaaaaatttacacatgaatctggaattttgaaatataagcatcagtatgtaacgtggacaacaaccttcttg |
18176049 |
T |
|
Q |
427 |
actggaacgagcacatcaacaatgagaagcaata |
460 |
Q |
|
|
|||||||||||||||||||||||||||||||||| |
|
|
T |
18176050 |
actggaacgagcacatcaacaatgagaagcaata |
18176083 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #4
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 568 - 654
Target Start/End: Original strand, 15284282 - 15284369
Alignment:
Q |
568 |
atgtctcaaaaagtctcaaggttttttgtgagattgttgaatgagcatttcatgtgtatttttaactaaaaagt-ctcacaaaatcca |
654 |
Q |
|
|
|||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| ||||||||||||| |
|
|
T |
15284282 |
atgtctcaaaaagtcttaaggttttttgtgagattgttgaatgagcatgtcatgtgtatttttaactaaaaagtactcacaaaatcca |
15284369 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #5
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 132 - 245
Target Start/End: Original strand, 3858155 - 3858268
Alignment:
Q |
132 |
gattcaatatcatgagatttatttatgttttataaaagtcttgattgaataccacaagannnnnnnattattaaaaagtcttttaaaatcccttcaaatc |
231 |
Q |
|
|
|||| ||||||||||||||||||||| || |||||||||||||||||||||||| || | || ||||||||||||||||||||||||| ||||| |
|
|
T |
3858155 |
gattgaatatcatgagatttatttatattctataaaagtcttgattgaataccaaaaaagttttttatcattaaaaagtcttttaaaatcccttaaaatc |
3858254 |
T |
|
Q |
232 |
ttaattcaatacac |
245 |
Q |
|
|
|||||||||||||| |
|
|
T |
3858255 |
ttaattcaatacac |
3858268 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #6
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 564 - 654
Target Start/End: Complemental strand, 2085877 - 2085787
Alignment:
Q |
564 |
atgaatgtctcaaaaagtctcaaggttttttgtgagattgttgaatgagcatttcatgtgtatttttaactaaaaagtctcacaaaatcca |
654 |
Q |
|
|
||||| |||| |||||||| ||||||||| | |||||||||||| ||| ||| ||||||||||||| || ||||||||||||||||||||| |
|
|
T |
2085877 |
atgaaagtcttaaaaagtcacaaggttttctatgagattgttgattgaacatatcatgtgtattttcaaataaaaagtctcacaaaatcca |
2085787 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #7
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 568 - 621
Target Start/End: Complemental strand, 2288688 - 2288635
Alignment:
Q |
568 |
atgtctcaaaaagtctcaaggttttttgtgagattgttgaatgagcatttcatg |
621 |
Q |
|
|
|||||||||||||| ||||||||||||||||||||||||||||||||| ||||| |
|
|
T |
2288688 |
atgtctcaaaaagtttcaaggttttttgtgagattgttgaatgagcatatcatg |
2288635 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #8
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 589 - 651
Target Start/End: Complemental strand, 43022743 - 43022682
Alignment:
Q |
589 |
ttttttgtgagattgttgaatgagcatttcatgtgtatttttaactaaaaagtctcacaaaat |
651 |
Q |
|
|
||||||| ||||||||||||||| ||| ||||||||||||||||||||||| ||||||||||| |
|
|
T |
43022743 |
ttttttgagagattgttgaatgatcatatcatgtgtatttttaactaaaaa-tctcacaaaat |
43022682 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #9
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 146 - 245
Target Start/End: Complemental strand, 2288560 - 2288463
Alignment:
Q |
146 |
agatttatttatgttttataaaagtcttgattgaataccacaagannnnnnnattattaaaaagtcttttaaaatcccttcaaatcttaattcaatacac |
245 |
Q |
|
|
|||||| |||| |||||||||||||||||||||||||||| ||| || || |||||||||||||||||||||| || ||| |||||||||||| |
|
|
T |
2288560 |
agatttgtttacattttataaaagtcttgattgaataccactagactttt--ataataaaaaagtcttttaaaatcccttgaattctcaattcaatacac |
2288463 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #10
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 165 - 225
Target Start/End: Complemental strand, 378952 - 378892
Alignment:
Q |
165 |
aaaagtcttgattgaataccacaagannnnnnnattattaaaaagtcttttaaaatccctt |
225 |
Q |
|
|
|||||||||||||||||||||||||| || ||||||||||||||||||||||||| |
|
|
T |
378952 |
aaaagtcttgattgaataccacaagactttttcataattaaaaagtcttttaaaatccctt |
378892 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #11
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 168 - 260
Target Start/End: Complemental strand, 24776325 - 24776233
Alignment:
Q |
168 |
agtcttgattgaataccacaagannnnnnnattattaaaaagtcttttaaaatcccttcaaatcttaattcaatacactctccttagtttatt |
260 |
Q |
|
|
||||||||||||||||||||||| || || |||||||||||||||||||||| |||| | || |||||||| | |||||||||||| |
|
|
T |
24776325 |
agtcttgattgaataccacaagactttttcatgataaaaaagtcttttaaaatcccttagaatcatgatccaatacaccccccttagtttatt |
24776233 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #12
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 168 - 240
Target Start/End: Complemental strand, 32125220 - 32125148
Alignment:
Q |
168 |
agtcttgattgaataccacaagannnnnnnattattaaaaagtcttttaaaatcccttcaaatcttaattcaa |
240 |
Q |
|
|
||||||||||||||||||||||| ||||| |||||||||||||||||||||| ||||| | |||||| |
|
|
T |
32125220 |
agtcttgattgaataccacaagactttttcattataaaaaagtcttttaaaatcccttaaaatcatgattcaa |
32125148 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #13
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 571 - 654
Target Start/End: Complemental strand, 42863394 - 42863311
Alignment:
Q |
571 |
tctcaaaaagtctcaaggttttttgtgagattgttgaatgagcatttcatgtgtatttttaactaaaaagtctcacaaaatcca |
654 |
Q |
|
|
|||| ||||||||||| |||||||||||||||| |||||| ||| | |||| ||||||||| ||| || ||| |||||||||| |
|
|
T |
42863394 |
tctcgaaaagtctcaatattttttgtgagattgtagaatgaacatgttatgtatatttttaattaagaactcttacaaaatcca |
42863311 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #14
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 165 - 244
Target Start/End: Complemental strand, 26788757 - 26788678
Alignment:
Q |
165 |
aaaagtcttgattgaataccacaagannnnnnnattattaaaaagtcttttaaaatcccttcaaatcttaattcaataca |
244 |
Q |
|
|
|||||||||||||||||||||||||| || ||||||||||||||||||||||| | |||| |||| ||||||| |
|
|
T |
26788757 |
aaaagtcttgattgaataccacaagactttttcataattaaaaagtcttttaaaatcccatagaatcctaatccaataca |
26788678 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #15
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 165 - 244
Target Start/End: Complemental strand, 28844528 - 28844449
Alignment:
Q |
165 |
aaaagtcttgattgaataccacaagannnnnnnattattaaaaagtcttttaaaatcccttcaaatcttaattcaataca |
244 |
Q |
|
|
|||||||||||||||||||||||||| || ||||||||||||||||||||||| | |||| |||| ||||||| |
|
|
T |
28844528 |
aaaagtcttgattgaataccacaagactttttcataattaaaaagtcttttaaaatcccatagaatcctaatccaataca |
28844449 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #16
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 168 - 225
Target Start/End: Complemental strand, 20605122 - 20605065
Alignment:
Q |
168 |
agtcttgattgaataccacaagannnnnnnattattaaaaagtcttttaaaatccctt |
225 |
Q |
|
|
||||||||||||||||||||||| || ||||||||||||||||||||||||| |
|
|
T |
20605122 |
agtcttgattgaataccacaagactttttcatgattaaaaagtcttttaaaatccctt |
20605065 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #17
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 112 - 187
Target Start/End: Complemental strand, 37981756 - 37981682
Alignment:
Q |
112 |
aaaaaatcttgattgtcttngattcaatatcatgagatttatttatgttttataaaagtcttgattgaataccaca |
187 |
Q |
|
|
|||||||| |||||||||| ||| |||| || | |||||||||| |||||||||||| |||||||||||||||| |
|
|
T |
37981756 |
aaaaaatcatgattgtctta-attgaataccacaaaatttatttatattttataaaagttttgattgaataccaca |
37981682 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #18
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 165 - 221
Target Start/End: Original strand, 215462 - 215518
Alignment:
Q |
165 |
aaaagtcttgattgaataccacaagannnnnnnattattaaaaagtcttttaaaatc |
221 |
Q |
|
|
|||||||||||||||||||||||||| || ||||||||||||||||||||| |
|
|
T |
215462 |
aaaagtcttgattgaataccacaagactttttcataattaaaaagtcttttaaaatc |
215518 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #19
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 165 - 221
Target Start/End: Complemental strand, 3463644 - 3463588
Alignment:
Q |
165 |
aaaagtcttgattgaataccacaagannnnnnnattattaaaaagtcttttaaaatc |
221 |
Q |
|
|
|||||||||||||||||||||||||| || ||||||||||||||||||||| |
|
|
T |
3463644 |
aaaagtcttgattgaataccacaagattttttcataattaaaaagtcttttaaaatc |
3463588 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #20
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 112 - 190
Target Start/End: Original strand, 7488079 - 7488156
Alignment:
Q |
112 |
aaaaaatcttgattgtcttngattcaatatcatgagatttatttatgttttataaaagtcttgattgaataccacaaga |
190 |
Q |
|
|
||||| |||| |||||||| |||| |||| || ||||||||||| ||| ||||||||||||||| |||||||||||| |
|
|
T |
7488079 |
aaaaagtcttaattgtctt-gattgaataccacaagatttatttagatttcataaaagtcttgattcaataccacaaga |
7488156 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #21
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 165 - 223
Target Start/End: Original strand, 28740520 - 28740578
Alignment:
Q |
165 |
aaaagtcttgattgaataccacaagannnnnnnattattaaaaagtcttttaaaatccc |
223 |
Q |
|
|
|||||| ||||||||||||||||||| || ||||||||||||||||||||||| |
|
|
T |
28740520 |
aaaagttttgattgaataccacaagactttttcataattaaaaagtcttttaaaatccc |
28740578 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #22
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 204 - 253
Target Start/End: Complemental strand, 29940988 - 29940939
Alignment:
Q |
204 |
aaaaagtcttttaaaatcccttcaaatcttaattcaatacactctcctta |
253 |
Q |
|
|
||||||||||||||||||| || |||||| ||| |||||||| ||||||| |
|
|
T |
29940988 |
aaaaagtcttttaaaatcctttgaaatctcaatccaatacaccctcctta |
29940939 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #23
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 165 - 222
Target Start/End: Complemental strand, 33135596 - 33135539
Alignment:
Q |
165 |
aaaagtcttgattgaataccacaagannnnnnnattattaaaaagtcttttaaaatcc |
222 |
Q |
|
|
||||||||||||||||||||| |||| || |||||||||||||||||||||| |
|
|
T |
33135596 |
aaaagtcttgattgaataccataagactttttcataattaaaaagtcttttaaaatcc |
33135539 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3 (Bit Score: 164; Significance: 3e-87; HSPs: 32)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 164; E-Value: 3e-87
Query Start/End: Original strand, 474 - 657
Target Start/End: Original strand, 45215063 - 45215246
Alignment:
Q |
474 |
aaagtgtacggtgtgaaattggaataattacgttgaaggagagtagaggctatgactctgagggcaagagacaaggatgaaacaaaagttatgaatgtct |
573 |
Q |
|
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| ||||||||||||||||||||||||| ||||||||| |
|
|
T |
45215063 |
aaagtgtacggtgtgaaattggaataattacgttgaaggagagtagaggctatgactgtgagggtaagagacaaggatgaaacaaaagttgtgaatgtct |
45215162 |
T |
|
Q |
574 |
caaaaagtctcaaggttttttgtgagattgttgaatgagcatttcatgtgtatttttaactaaaaagtctcacaaaatccactc |
657 |
Q |
|
|
|||||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||| |
|
|
T |
45215163 |
caaaaagtctcaaggttttttgtgagattgttgaatgagcatctcaggtgtatttttaactaaaaagtctcacaaaatccactc |
45215246 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #2
Raw Score: 125; E-Value: 5e-64
Query Start/End: Original strand, 1 - 251
Target Start/End: Original strand, 45215242 - 45215489
Alignment:
Q |
1 |
cactctacaatagaatccattaaaatctcaagannnnnnnaataccaatagacattttataagttactataaattctcaaatga-tgccatgggaattga |
99 |
Q |
|
|
||||||||||| ||||| ||||||||||||||| ||||||||||||||||||||||||| ||| ||| ||||| ||| | ||||||||||||| |
|
|
T |
45215242 |
cactctacaattgaatctattaaaatctcaagatttttg-aataccaatagacattttataagttgctacaaaa-ctcaattgaataccatgggaattga |
45215339 |
T |
|
Q |
100 |
ttgccctggaataaaaaatcttgattgtcttngattcaatatcatgagatttatttatgttttataaaagtcttgattgaataccacaagannnnnnnat |
199 |
Q |
|
|
||||| || |||||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||| || |
|
|
T |
45215340 |
ttgccttg-aataaaaaatcttgattgtctt-gattcaataccatgagatttatttatgttttataaaagttttgattgaataccacaagatttttttat |
45215437 |
T |
|
Q |
200 |
tattaaaaagtcttttaaaatcccttcaaatcttaattcaatacactctcct |
251 |
Q |
|
|
|||||||||||||||||||||||||||||||||||||| ||||||| ||||| |
|
|
T |
45215438 |
tattaaaaagtcttttaaaatcccttcaaatcttaatttaatacaccctcct |
45215489 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #3
Raw Score: 98; E-Value: 6e-48
Query Start/End: Original strand, 327 - 469
Target Start/End: Original strand, 45214836 - 45214978
Alignment:
Q |
327 |
taataaattagaaaacaaattgactttnnnnnnntttacacatgaatctgcaattttgaaatacaagcatcagtatgtaacgtggacaacaaccttctta |
426 |
Q |
|
|
||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||| |||| |||||||||||||||||||||||||| |
|
|
T |
45214836 |
taataaattagaaaataaattgactttaaaaaaatttacacatgaatctgcaattttgaaatacaagtatcactatgtaacgtggacaacaaccttcttg |
45214935 |
T |
|
Q |
427 |
actggaacgagcacatcaacaatgagaagcaataatataaaaa |
469 |
Q |
|
|
||||||| |||||||||||||||||||| |||||||||||||| |
|
|
T |
45214936 |
actggaatgagcacatcaacaatgagaaacaataatataaaaa |
45214978 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #4
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 146 - 232
Target Start/End: Original strand, 10104997 - 10105083
Alignment:
Q |
146 |
agatttatttatgttttataaaagtcttgattgaataccacaagannnnnnnattattaaaaagtcttttaaaatcccttcaaatct |
232 |
Q |
|
|
|||||||||||| |||||||||||||||||||||||||||||||| || || |||||||||||||||||||||| |||||| |
|
|
T |
10104997 |
agatttatttatattttataaaagtcttgattgaataccacaagatttttttataataaaaaagtcttttaaaatcccttgaaatct |
10105083 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #5
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 146 - 232
Target Start/End: Original strand, 10216144 - 10216230
Alignment:
Q |
146 |
agatttatttatgttttataaaagtcttgattgaataccacaagannnnnnnattattaaaaagtcttttaaaatcccttcaaatct |
232 |
Q |
|
|
|||||||||||| |||||||||||||||||||||||||||||||| || || ||||| |||||||||||||||| |||||| |
|
|
T |
10216144 |
agatttatttatattttataaaagtcttgattgaataccacaagacttttttataataaaaaaatcttttaaaatccctttaaatct |
10216230 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #6
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 146 - 232
Target Start/End: Original strand, 10225773 - 10225859
Alignment:
Q |
146 |
agatttatttatgttttataaaagtcttgattgaataccacaagannnnnnnattattaaaaagtcttttaaaatcccttcaaatct |
232 |
Q |
|
|
|||||||||||| |||||||||||||||||||||||| ||||||| || || |||||||||||||||||||||| |||||| |
|
|
T |
10225773 |
agatttatttatattttataaaagtcttgattgaatagcacaagacttttttataataaaaaagtcttttaaaatcccttgaaatct |
10225859 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #7
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 592 - 657
Target Start/End: Original strand, 34292293 - 34292358
Alignment:
Q |
592 |
tttgtgagattgttgaatgagcatttcatgtgtatttttaactaaaaagtctcacaaaatccactc |
657 |
Q |
|
|
|||||||||||||||||||||||| | ||||||||||||| |||||| ||||||||||||||||| |
|
|
T |
34292293 |
tttgtgagattgttgaatgagcatcttatgtgtatttttagttaaaaaatctcacaaaatccactc |
34292358 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #8
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 557 - 654
Target Start/End: Original strand, 44041790 - 44041887
Alignment:
Q |
557 |
aaaagttatgaatgtctcaaaaagtctcaaggttttttgtgagattgttgaatgagcatttcatgtgtatttttaactaaaaagtctcacaaaatcca |
654 |
Q |
|
|
|||| ||||||| |||||| ||||||||| |||||| | ||||||||||||| ||| || | ||||||||||| ||||||||||||||| ||||||| |
|
|
T |
44041790 |
aaaaattatgaaagtctcagaaagtctcatggttttctttgagattgttgaaagagtatgttatgtgtattttcaactaaaaagtctcatgaaatcca |
44041887 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #9
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 112 - 190
Target Start/End: Complemental strand, 46749385 - 46749308
Alignment:
Q |
112 |
aaaaaatcttgattgtcttngattcaatatcatgagatttatttatgttttataaaagtcttgattgaataccacaaga |
190 |
Q |
|
|
||||||||||||||||||| ||| |||| ||| |||||||||||| ||||||||||||||||||| | |||||||||| |
|
|
T |
46749385 |
aaaaaatcttgattgtctta-attgaataccataagatttatttatattttataaaagtcttgattcattaccacaaga |
46749308 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #10
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 581 - 651
Target Start/End: Original strand, 12103172 - 12103242
Alignment:
Q |
581 |
tctcaaggttttttgtgagattgttgaatgagcatttcatgtgtatttttaactaaaaagtctcacaaaat |
651 |
Q |
|
|
|||||||| | |||||||||| ||||||||||||| | ||||||||||||| |||||||||||||||||| |
|
|
T |
12103172 |
tctcaaggatatttgtgagatcgttgaatgagcatgttatgtgtatttttagttaaaaagtctcacaaaat |
12103242 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #11
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 146 - 190
Target Start/End: Original strand, 10225652 - 10225696
Alignment:
Q |
146 |
agatttatttatgttttataaaagtcttgattgaataccacaaga |
190 |
Q |
|
|
|||||||||||| |||||||||||||||||||||||||||||||| |
|
|
T |
10225652 |
agatttatttatattttataaaagtcttgattgaataccacaaga |
10225696 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #12
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 165 - 244
Target Start/End: Complemental strand, 10660506 - 10660427
Alignment:
Q |
165 |
aaaagtcttgattgaataccacaagannnnnnnattattaaaaagtcttttaaaatcccttcaaatcttaattcaataca |
244 |
Q |
|
|
|||||||||||||||||||||||||| || ||||||||||||||||||||||| | ||||||||| ||||||| |
|
|
T |
10660506 |
aaaagtcttgattgaataccacaagactttttcataattaaaaagtcttttaaaatcccatagaatcttaatccaataca |
10660427 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #13
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 165 - 244
Target Start/End: Original strand, 31646519 - 31646598
Alignment:
Q |
165 |
aaaagtcttgattgaataccacaagannnnnnnattattaaaaagtcttttaaaatcccttcaaatcttaattcaataca |
244 |
Q |
|
|
|||||||||||||||||||||||||| || ||||||||||||||||||||||| | |||| |||||||||||| |
|
|
T |
31646519 |
aaaagtcttgattgaataccacaagactttttcataattaaaaagtcttttaaaatcccatagaatcctaattcaataca |
31646598 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #14
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 204 - 253
Target Start/End: Original strand, 10067725 - 10067774
Alignment:
Q |
204 |
aaaaagtcttttaaaatcccttcaaatcttaattcaatacactctcctta |
253 |
Q |
|
|
|||||||||||||||||||||| |||||| |||||||||||| ||||||| |
|
|
T |
10067725 |
aaaaagtcttttaaaatcccttgaaatctcaattcaatacaccctcctta |
10067774 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #15
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 146 - 190
Target Start/End: Original strand, 10104876 - 10104920
Alignment:
Q |
146 |
agatttatttatgttttataaaagtcttgattgaataccacaaga |
190 |
Q |
|
|
|||||||||||| |||||||||||| ||||||||||||||||||| |
|
|
T |
10104876 |
agatttatttatattttataaaagttttgattgaataccacaaga |
10104920 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #16
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 146 - 190
Target Start/End: Original strand, 10216023 - 10216067
Alignment:
Q |
146 |
agatttatttatgttttataaaagtcttgattgaataccacaaga |
190 |
Q |
|
|
|||||||||||| |||||||||||| ||||||||||||||||||| |
|
|
T |
10216023 |
agatttatttatattttataaaagttttgattgaataccacaaga |
10216067 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #17
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 165 - 244
Target Start/End: Original strand, 36674365 - 36674444
Alignment:
Q |
165 |
aaaagtcttgattgaataccacaagannnnnnnattattaaaaagtcttttaaaatcccttcaaatcttaattcaataca |
244 |
Q |
|
|
|||||||||||||||||||||||||| || ||||||||||||||||||||||| | |||| |||| ||||||| |
|
|
T |
36674365 |
aaaagtcttgattgaataccacaagactttttcataattaaaaagtcttttaaaatcccatagaatcctaatccaataca |
36674444 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #18
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 116 - 185
Target Start/End: Original strand, 44041999 - 44042067
Alignment:
Q |
116 |
aatcttgattgtcttngattcaatatcatgagatttatttatgttttataaaagtcttgattgaatacca |
185 |
Q |
|
|
||||||||||||||| ||| |||| || |||||||||||| || |||||||||||||||||||||||| |
|
|
T |
44041999 |
aatcttgattgtctta-attgaataccacaagatttatttatattctataaaagtcttgattgaatacca |
44042067 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #19
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 146 - 244
Target Start/End: Complemental strand, 44701645 - 44701546
Alignment:
Q |
146 |
agatttatttatgttttataaaagtcttgattgaataccacaagannnnnnnattattaaaaa-gtcttttaaaatcccttcaaatcttaattcaataca |
244 |
Q |
|
|
|||||| |||| |||||||||||||||||||||||| ||| ||| ||||| ||||| ||||||||||||||||| || ||| ||||||||||| |
|
|
T |
44701645 |
agatttgtttacattttataaaagtcttgattgaatatcactagacattttcattataaaaaatgtcttttaaaatcccttgaattctcaattcaataca |
44701546 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #20
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 146 - 183
Target Start/End: Original strand, 10055767 - 10055804
Alignment:
Q |
146 |
agatttatttatgttttataaaagtcttgattgaatac |
183 |
Q |
|
|
|||||||||||| ||||||||||||||||||||||||| |
|
|
T |
10055767 |
agatttatttatattttataaaagtcttgattgaatac |
10055804 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #21
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 171 - 236
Target Start/End: Original strand, 6035293 - 6035358
Alignment:
Q |
171 |
cttgattgaataccacaagannnnnnnattattaaaaagtcttttaaaatcccttcaaatcttaat |
236 |
Q |
|
|
|||||||||||||||||||| || ||||||||||||||||||||||| | |||||||||| |
|
|
T |
6035293 |
cttgattgaataccacaagattttttcataattaaaaagtcttttaaaatcccataaaatcttaat |
6035358 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #22
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 165 - 222
Target Start/End: Original strand, 23753621 - 23753678
Alignment:
Q |
165 |
aaaagtcttgattgaataccacaagannnnnnnattattaaaaagtcttttaaaatcc |
222 |
Q |
|
|
|||||||||||||||||||||||||| || |||||||||||||||||||||| |
|
|
T |
23753621 |
aaaagtcttgattgaataccacaagactttttcataattaaaaagtcttttaaaatcc |
23753678 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #23
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 168 - 225
Target Start/End: Original strand, 44762275 - 44762332
Alignment:
Q |
168 |
agtcttgattgaataccacaagannnnnnnattattaaaaagtcttttaaaatccctt |
225 |
Q |
|
|
||||||||||||||||||||||| ||||| |||||||||||||||||||||| |
|
|
T |
44762275 |
agtcttgattgaataccacaagactttttcattataaaaaagtcttttaaaatccctt |
44762332 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #24
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 165 - 221
Target Start/End: Complemental strand, 11431497 - 11431441
Alignment:
Q |
165 |
aaaagtcttgattgaataccacaagannnnnnnattattaaaaagtcttttaaaatc |
221 |
Q |
|
|
|||||||||||||||||||||||||| || ||||||||||||||||||||| |
|
|
T |
11431497 |
aaaagtcttgattgaataccacaagactttttcataattaaaaagtcttttaaaatc |
11431441 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #25
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 165 - 221
Target Start/End: Original strand, 27240478 - 27240534
Alignment:
Q |
165 |
aaaagtcttgattgaataccacaagannnnnnnattattaaaaagtcttttaaaatc |
221 |
Q |
|
|
|||||||||||||||||||||||||| || ||||||||||||||||||||| |
|
|
T |
27240478 |
aaaagtcttgattgaataccacaagactttttcataattaaaaagtcttttaaaatc |
27240534 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #26
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 165 - 221
Target Start/End: Original strand, 44906748 - 44906804
Alignment:
Q |
165 |
aaaagtcttgattgaataccacaagannnnnnnattattaaaaagtcttttaaaatc |
221 |
Q |
|
|
|||||||||||||||||||||||||| || ||||||||||||||||||||| |
|
|
T |
44906748 |
aaaagtcttgattgaataccacaagactttttcataattaaaaagtcttttaaaatc |
44906804 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #27
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 201 - 244
Target Start/End: Original strand, 50901212 - 50901255
Alignment:
Q |
201 |
attaaaaagtcttttaaaatcccttcaaatcttaattcaataca |
244 |
Q |
|
|
||||||||||||||||||||||||| |||| ||||| ||||||| |
|
|
T |
50901212 |
attaaaaagtcttttaaaatcccttaaaattttaatccaataca |
50901255 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #28
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 165 - 221
Target Start/End: Complemental strand, 54628814 - 54628758
Alignment:
Q |
165 |
aaaagtcttgattgaataccacaagannnnnnnattattaaaaagtcttttaaaatc |
221 |
Q |
|
|
|||||||||||||||||||||||||| || ||||||||||||||||||||| |
|
|
T |
54628814 |
aaaagtcttgattgaataccacaagacgttttcataattaaaaagtcttttaaaatc |
54628758 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #29
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 165 - 220
Target Start/End: Complemental strand, 18749541 - 18749486
Alignment:
Q |
165 |
aaaagtcttgattgaataccacaagannnnnnnattattaaaaagtcttttaaaat |
220 |
Q |
|
|
|||||||||||||||||||||||||| || |||||||||||||||||||| |
|
|
T |
18749541 |
aaaagtcttgattgaataccacaagactttttcataattaaaaagtcttttaaaat |
18749486 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 204 - 257
Target Start/End: Original strand, 36055048 - 36055101
Alignment:
Q |
204 |
aaaaagtcttttaaaatcccttcaaatcttaattcaatacactctccttagttt |
257 |
Q |
|
|
||||||||||||||||||| || |||||| ||| |||||||| | ||||||||| |
|
|
T |
36055048 |
aaaaagtcttttaaaatcctttgaaatctcaatccaatacaccccccttagttt |
36055101 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #31
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 146 - 183
Target Start/End: Original strand, 45926928 - 45926965
Alignment:
Q |
146 |
agatttatttatgttttataaaagtcttgattgaatac |
183 |
Q |
|
|
|||||||||||| ||||||| ||||||||||||||||| |
|
|
T |
45926928 |
agatttatttatattttatagaagtcttgattgaatac |
45926965 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 204 - 245
Target Start/End: Original strand, 50900488 - 50900529
Alignment:
Q |
204 |
aaaaagtcttttaaaatcccttcaaatcttaattcaatacac |
245 |
Q |
|
|
||||||||||||||||||| || |||||||||| |||||||| |
|
|
T |
50900488 |
aaaaagtcttttaaaatcctttgaaatcttaatccaatacac |
50900529 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6 (Bit Score: 90; Significance: 4e-43; HSPs: 14)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 90; E-Value: 4e-43
Query Start/End: Original strand, 515 - 656
Target Start/End: Original strand, 31609396 - 31609537
Alignment:
Q |
515 |
agtagaggctatgactctgagggcaagagacaaggatgaaacaaaagttatgaatgtctcaaaaagtctcaaggttttttgtgagattgttgaatgagca |
614 |
Q |
|
|
|||||||||||||| | || ||| | || |||| || |||||||||||||| ||||||||||||||||||||||||||| ||||||||||||||||||| |
|
|
T |
31609396 |
agtagaggctatgattgtgggggtatgaaacaaagacaaaacaaaagttatggatgtctcaaaaagtctcaaggttttttatgagattgttgaatgagca |
31609495 |
T |
|
Q |
615 |
tttcatgtgtatttttaactaaaaagtctcacaaaatccact |
656 |
Q |
|
|
| ||||||||||||| |||||||||||||||||||||||||| |
|
|
T |
31609496 |
tgtcatgtgtattttcaactaaaaagtctcacaaaatccact |
31609537 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #2
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 568 - 654
Target Start/End: Complemental strand, 5957457 - 5957371
Alignment:
Q |
568 |
atgtctcaaaaagtctcaaggttttttgtgagattgttgaatgagcatttcatgtgtatttttaactaaaaagtctcacaaaatcca |
654 |
Q |
|
|
||||||||||||||||||||||||||||||||||| |||||||||||| |||||||||||||||||||||||||||||||||||||| |
|
|
T |
5957457 |
atgtctcaaaaagtctcaaggttttttgtgagattattgaatgagcatatcatgtgtatttttaactaaaaagtctcacaaaatcca |
5957371 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #3
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 143 - 245
Target Start/End: Original strand, 31609672 - 31609774
Alignment:
Q |
143 |
atgagatttatttatgttttataaaagtcttgattgaataccacaagannnnnnnattattaaaaagtcttttaaaatcccttcaaatcttaattcaata |
242 |
Q |
|
|
||||||||||||||| || ||||||||||||||||||||||||||||| || |||||||||||||||||||||| || ||| ||| |||||||| |
|
|
T |
31609672 |
atgagatttatttatattctataaaagtcttgattgaataccacaagatttttttataattaaaaagtcttttaaaatccattgaaaacttcattcaata |
31609771 |
T |
|
Q |
243 |
cac |
245 |
Q |
|
|
||| |
|
|
T |
31609772 |
cac |
31609774 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #4
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 146 - 245
Target Start/End: Complemental strand, 5957227 - 5957128
Alignment:
Q |
146 |
agatttatttatgttttataaaagtcttgattgaataccacaagannnnnnnattattaaaaagtcttttaaaatcccttcaaatcttaattcaatacac |
245 |
Q |
|
|
|||||| |||| |||||||||||||||||||||||||||| ||| ||||| |||||||||||||||||||||| || ||| |||||||||||| |
|
|
T |
5957227 |
agatttgtttacattttataaaagtcttgattgaataccactagacttttttattataaaaaagtcttttaaaatcccttgaattctcaattcaatacac |
5957128 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #5
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 112 - 245
Target Start/End: Complemental strand, 7100298 - 7100166
Alignment:
Q |
112 |
aaaaaatcttgattgtcttngattcaatatcatgagatttatttatgttttataaaagtcttgattgaataccacaagannnnnnnattattaaaaagtc |
211 |
Q |
|
|
||||| || |||||||||| |||| |||| || |||||| |||| |||||||||||||||||||||||||||| ||| ||| | |||||||| |
|
|
T |
7100298 |
aaaaagtcatgattgtctt-gattgaataccacaagatttgtttagattttataaaagtcttgattgaataccactagactttttcattctaaaaaagtc |
7100200 |
T |
|
Q |
212 |
ttttaaaatcccttcaaatcttaattcaatacac |
245 |
Q |
|
|
|||||||||||||| ||||| |||||||||||| |
|
|
T |
7100199 |
ttttaaaatcccttgaaatcccaattcaatacac |
7100166 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #6
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 112 - 245
Target Start/End: Original strand, 8794332 - 8794464
Alignment:
Q |
112 |
aaaaaatcttgattgtcttngattcaatatcatgagatttatttatgttttataaaagtcttgattgaataccacaagannnnnnnattattaaaaagtc |
211 |
Q |
|
|
||||| || |||||||||| |||| |||| || |||||| |||| |||||||||||||||||||||||||||| ||| ||| | |||||||| |
|
|
T |
8794332 |
aaaaagtcatgattgtctt-gattgaataccacaagatttgtttagattttataaaagtcttgattgaataccactagactttttcattctaaaaaagtc |
8794430 |
T |
|
Q |
212 |
ttttaaaatcccttcaaatcttaattcaatacac |
245 |
Q |
|
|
|||||||||||||| ||||| |||||||||||| |
|
|
T |
8794431 |
ttttaaaatcccttgaaatcccaattcaatacac |
8794464 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #7
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 112 - 231
Target Start/End: Complemental strand, 709049 - 708931
Alignment:
Q |
112 |
aaaaaatcttgattgtcttngattcaatatcatgagatttatttatgttttataaaagtcttgattgaataccacaagannnnnnnattattaaaaagtc |
211 |
Q |
|
|
||||| || |||||||||| |||| |||| || ||||||||||| |||||||||||| ||||||||||||||| ||| ||||| |||||||| |
|
|
T |
709049 |
aaaaagtcatgattgtctt-gattgaataccacaagatttatttacattttataaaagttttgattgaataccactagattttttcattataaaaaagtc |
708951 |
T |
|
Q |
212 |
ttttaaaatcccttcaaatc |
231 |
Q |
|
|
|||||||||||||| ||||| |
|
|
T |
708950 |
ttttaaaatcccttgaaatc |
708931 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #8
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 581 - 654
Target Start/End: Complemental strand, 709229 - 709156
Alignment:
Q |
581 |
tctcaaggttttttgtgagattgttgaatgagcatttcatgtgtatttttaactaaaaagtctcacaaaatcca |
654 |
Q |
|
|
|||||||| ||| ||||||||||||| ||||| | | || | ||||||||||||||||||||||||||||||| |
|
|
T |
709229 |
tctcaaggatttgtgtgagattgttggatgagagtattatttatatttttaactaaaaagtctcacaaaatcca |
709156 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #9
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 165 - 244
Target Start/End: Complemental strand, 31895667 - 31895588
Alignment:
Q |
165 |
aaaagtcttgattgaataccacaagannnnnnnattattaaaaagtcttttaaaatcccttcaaatcttaattcaataca |
244 |
Q |
|
|
|||||||||||||||||||||||||| || ||||||||||||||||||||||| | |||| |||| ||||||| |
|
|
T |
31895667 |
aaaagtcttgattgaataccacaagactttttcataattaaaaagtcttttaaaatcccatagaatcctaatccaataca |
31895588 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #10
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 165 - 244
Target Start/End: Complemental strand, 34773380 - 34773301
Alignment:
Q |
165 |
aaaagtcttgattgaataccacaagannnnnnnattattaaaaagtcttttaaaatcccttcaaatcttaattcaataca |
244 |
Q |
|
|
|||||||||||||||||||||||||| || ||||||||||||||||||||||| | |||| |||| ||||||| |
|
|
T |
34773380 |
aaaagtcttgattgaataccacaagactttttcataattaaaaagtcttttaaaatcccatataatcctaatccaataca |
34773301 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #11
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 577 - 640
Target Start/End: Original strand, 10009348 - 10009411
Alignment:
Q |
577 |
aaagtctcaaggttttttgtgagattgttgaatgagcatttcatgtgtatttttaactaaaaag |
640 |
Q |
|
|
|||||||||| ||||| | | |||||||||| ||||||| | |||| ||||||||||||||||| |
|
|
T |
10009348 |
aaagtctcaacgttttctatcagattgttgattgagcatattatgtatatttttaactaaaaag |
10009411 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #12
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 624 - 654
Target Start/End: Complemental strand, 7100436 - 7100406
Alignment:
Q |
624 |
tatttttaactaaaaagtctcacaaaatcca |
654 |
Q |
|
|
||||||||||||||||||||||||||||||| |
|
|
T |
7100436 |
tatttttaactaaaaagtctcacaaaatcca |
7100406 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #13
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 624 - 654
Target Start/End: Original strand, 8794194 - 8794224
Alignment:
Q |
624 |
tatttttaactaaaaagtctcacaaaatcca |
654 |
Q |
|
|
||||||||||||||||||||||||||||||| |
|
|
T |
8794194 |
tatttttaactaaaaagtctcacaaaatcca |
8794224 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #14
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 165 - 244
Target Start/End: Original strand, 14262667 - 14262746
Alignment:
Q |
165 |
aaaagtcttgattgaataccacaagannnnnnnattattaaaaagtcttttaaaatcccttcaaatcttaattcaataca |
244 |
Q |
|
|
|||| ||||||||||||||||||||| || ||||||||||||||||||||||| | |||| |||| ||||||| |
|
|
T |
14262667 |
aaaaatcttgattgaataccacaagattttttcataattaaaaagtcttttaaaatcccgtagaatcctaatccaataca |
14262746 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7 (Bit Score: 78; Significance: 5e-36; HSPs: 40)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 78; E-Value: 5e-36
Query Start/End: Original strand, 541 - 657
Target Start/End: Original strand, 37649424 - 37649541
Alignment:
Q |
541 |
gagacaaggatgaaacaaaagttatgaatgtctcaaaaagtctca-aggttttttgtgagattgttgaatgagcatttcatgtgtatttttaactaaaaa |
639 |
Q |
|
|
||||||| ||||||||||| ||||||||||||||||||||||| || ||||||||||||||||||||| |||||||||||||| |||| ||||||||| |
|
|
T |
37649424 |
gagacaacaatgaaacaaaatttatgaatgtctcaaaaagtctcttagtttttttgtgagattgttgaattagcatttcatgtgttttttgaactaaaaa |
37649523 |
T |
|
Q |
640 |
gtctcacaaaatccactc |
657 |
Q |
|
|
|||||||||||||||||| |
|
|
T |
37649524 |
gtctcacaaaatccactc |
37649541 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #2
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 515 - 656
Target Start/End: Original strand, 34115176 - 34115317
Alignment:
Q |
515 |
agtagaggctatgactctgagggcaagagacaaggatgaaacaaaagttatgaatgtctcaaaaagtctcaaggtttt-ttgtgagattgttgaatgagc |
613 |
Q |
|
|
|||||||||||||| |||| ||| | ||||||| || || ||||||||||| |||||||||||||| | |||||||| ||||||||||||||||||||| |
|
|
T |
34115176 |
agtagaggctatgattctg-gggtatgagacaaagacaaatcaaaagttatggatgtctcaaaaagttttaaggtttttttgtgagattgttgaatgagc |
34115274 |
T |
|
Q |
614 |
atttcatgtgtatttttaactaaaaagtctcacaaaatccact |
656 |
Q |
|
|
|| ||||||||||||| || ||||||||||||||||||||||| |
|
|
T |
34115275 |
atgtcatgtgtattttcaattaaaaagtctcacaaaatccact |
34115317 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #3
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 553 - 657
Target Start/End: Complemental strand, 28422052 - 28421949
Alignment:
Q |
553 |
aaacaaaagttatgaatgtctcaaaaagtctcaaggttttttgtgagattgttgaatgagcatttcatgtgtatttttaactaaaaagtctcacaaaatc |
652 |
Q |
|
|
|||||||||| ||||||||||| |||||||||| |||||| |||||||||||||||| || || ||||||||||||| ||||||||||| |||||||||| |
|
|
T |
28422052 |
aaacaaaagtcatgaatgtctcgaaaagtctca-ggttttctgtgagattgttgaataagtatctcatgtgtattttcaactaaaaagtttcacaaaatc |
28421954 |
T |
|
Q |
653 |
cactc |
657 |
Q |
|
|
||||| |
|
|
T |
28421953 |
cactc |
28421949 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #4
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 41 - 245
Target Start/End: Original strand, 37649576 - 37649776
Alignment:
Q |
41 |
aataccaatagacattttataagttactataaattctcaaatga-tgccatgggaattgattgccctggaataaaaaatcttgattgtcttngattcaat |
139 |
Q |
|
|
||||||||||||||||||||||||| || |||| ||||| || | |||||||| ||| ||||| || ||||||||||||||||||| || |||| ||| |
|
|
T |
37649576 |
aataccaatagacattttataagttggtagaaat-ctcaatcgaataccatgggatttggttgccttg-aataaaaaatcttgattgtgtt-gattgaat |
37649672 |
T |
|
Q |
140 |
atcatgagatttatttatgttttataaaagtcttgattgaataccacaagannnnnnnattattaaaaagtcttttaaaatcccttcaaatcttaattca |
239 |
Q |
|
|
| ||||||||||| ||||||| |||||||||||| |||||||||||| || || ||||||||||||||||||||| ||| ||||||||||||| |
|
|
T |
37649673 |
accatgagatttacttatgttctataaaagtctt-attgaataccac-cgaattttttatcattaaaaagtcttttaaaatctcttgaaatcttaattca |
37649770 |
T |
|
Q |
240 |
atacac |
245 |
Q |
|
|
|||||| |
|
|
T |
37649771 |
atacac |
37649776 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #5
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 41 - 244
Target Start/End: Original strand, 42678073 - 42678275
Alignment:
Q |
41 |
aataccaatagacattttataagttactataaattctcaaatga-tgccatgggaattgattgccctggaataaaaaa-tcttgattgtcttngattcaa |
138 |
Q |
|
|
||||||||||||||||||||||||| || |||| || || ||| | |||||| | ||| ||||||| ||||||||| ||||||||||||| |||| || |
|
|
T |
42678073 |
aataccaatagacattttataagttggtacaaat-cttaattgaataccatggaatttggttgccctc-aataaaaaagtcttgattgtctt-gattgaa |
42678169 |
T |
|
Q |
139 |
tatcatgagatttatttatgttttataaaagtcttgattgaataccacaagannnnnnnattattaaaaagtcttttaaaatcccttcaaatcttaattc |
238 |
Q |
|
|
|| |||||||||||||||||||| ||||||||||| |||||||| ||| ||| || ||||||||||||||||||||| ||| ||||||| |||| |
|
|
T |
42678170 |
taccatgagatttatttatgtttcataaaagtcttaattgaatatcaccagatttttttatcattaaaaagtcttttaaaatctcttgaaatcttgattc |
42678269 |
T |
|
Q |
239 |
aataca |
244 |
Q |
|
|
|||||| |
|
|
T |
42678270 |
aataca |
42678275 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #6
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 142 - 245
Target Start/End: Original strand, 26201541 - 26201643
Alignment:
Q |
142 |
catgagatttatttatgttttataaaagtcttgattgaataccacaagannnnnnnattattaaaaagtcttttaaaatcccttcaaatcttaattcaat |
241 |
Q |
|
|
|||||||||||||||| ||||||||||||||||| |||||||||||| | | ||||||||||| ||||||||||||| ||||||||||||||| |
|
|
T |
26201541 |
catgagatttatttatattttataaaagtcttgaatgaataccacaatatatttttagcattaaaaagtc-tttaaaatcccttgaaatcttaattcaat |
26201639 |
T |
|
Q |
242 |
acac |
245 |
Q |
|
|
|||| |
|
|
T |
26201640 |
acac |
26201643 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #7
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 108 - 244
Target Start/End: Original strand, 34115419 - 34115554
Alignment:
Q |
108 |
gaataaaaaatcttgattgtcttngattcaatatcatgagatttatttatgttttataaaagtcttgattgaataccacaagannnnnnnattattaaaa |
207 |
Q |
|
|
|||||||||| ||||| ||||| ||| |||| |||||||||||||||| || ||||||||||||||||||||| |||||| || ||||||| |
|
|
T |
34115419 |
gaataaaaaaatttgatcgtctta-attgaataccatgagatttatttatattccataaaagtcttgattgaatactacaagatttttttatcattaaaa |
34115517 |
T |
|
Q |
208 |
agtcttttaaaatcccttcaaatcttaattcaataca |
244 |
Q |
|
|
|||||||||||||| || |||| ||||||||||||| |
|
|
T |
34115518 |
agtcttttaaaatcatttgaaattttaattcaataca |
34115554 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #8
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 553 - 657
Target Start/End: Complemental strand, 41060329 - 41060225
Alignment:
Q |
553 |
aaacaaaagttatgaatgtctcaaaaagtctcaaggttttttgtgagattgttgaatgagcatttcatgtgtatttttaactaaaaagtctcacaaaatc |
652 |
Q |
|
|
|||||||| ||||| ||||| |||||||||||| | |||||||||||||||||||| ||| | ||||||||||||| |||||||||| |||||||| |
|
|
T |
41060329 |
aaacaaaaattatgggagtctctaaaagtctcaagaatatttgtgagattgttgaatgaacatgttatgtgtatttttagttaaaaagtcttacaaaatc |
41060230 |
T |
|
Q |
653 |
cactc |
657 |
Q |
|
|
||||| |
|
|
T |
41060229 |
cactc |
41060225 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #9
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 599 - 657
Target Start/End: Original strand, 46201057 - 46201115
Alignment:
Q |
599 |
gattgttgaatgagcatttcatgtgtatttttaactaaaaagtctcacaaaatccactc |
657 |
Q |
|
|
||||||||||| ||||||| ||||||||||||| |||||||||||||||||||||||| |
|
|
T |
46201057 |
gattgttgaataagcattttatgtgtatttttagataaaaagtctcacaaaatccactc |
46201115 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #10
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 112 - 245
Target Start/End: Original strand, 46037300 - 46037432
Alignment:
Q |
112 |
aaaaaatcttgattgtcttngattcaatatcatgagatttatttatgttttataaaagtcttgattgaataccacaagannnnnnnattattaaaaagtc |
211 |
Q |
|
|
||||| || |||||||||| |||| ||||||| |||||| |||| |||||||||||||||||||||||| ||| | | ||||| |||||||| |
|
|
T |
46037300 |
aaaaagtcatgattgtctt-gattgaatatcacaagatttgtttacattttataaaagtcttgattgaatatcactaaactttttaattataaaaaagtc |
46037398 |
T |
|
Q |
212 |
ttttaaaatcccttcaaatcttaattcaatacac |
245 |
Q |
|
|
|||||||||||| | || ||| |||||||||||| |
|
|
T |
46037399 |
ttttaaaatcccattaattctcaattcaatacac |
46037432 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #11
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 575 - 654
Target Start/End: Original strand, 46037113 - 46037192
Alignment:
Q |
575 |
aaaaagtctcaaggttttttgtgagattgttgaatgagcatttcatgtgtatttttaactaaaaagtctcacaaaatcca |
654 |
Q |
|
|
||||| |||||||| ||| ||||||||||||| ||||| | | || | ||||||||||||||||||||||||||||||| |
|
|
T |
46037113 |
aaaaaatctcaagggtttgtgtgagattgttggatgagagtattatttatatttttaactaaaaagtctcacaaaatcca |
46037192 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #12
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 142 - 221
Target Start/End: Original strand, 15913390 - 15913469
Alignment:
Q |
142 |
catgagatttatttatgttttataaaagtcttgattgaataccacaagannnnnnnattattaaaaagtcttttaaaatc |
221 |
Q |
|
|
|||||||||||||||| || ||||||||||||||||||||| || |||| ||||| |||||||||||||||||| |
|
|
T |
15913390 |
catgagatttatttatattctataaaagtcttgattgaatatcataagatgtttttattatcaaaaagtcttttaaaatc |
15913469 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #13
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 148 - 245
Target Start/End: Complemental strand, 3634312 - 3634215
Alignment:
Q |
148 |
atttatttatgttttataaaagtcttgattgaataccacaagannnnnnnattattaaaaagtcttttaaaatcccttcaaatcttaattcaatacac |
245 |
Q |
|
|
||||| |||| |||||||||||||||||||||||| ||||||| || || ||||||||||||||||||||| ||||| ||| |||||||| |
|
|
T |
3634312 |
atttacttatattttataaaagtcttgattgaatatcacaagacttttttataataaaaaagtcttttaaaatccctagaaatccgaatccaatacac |
3634215 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #14
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 147 - 220
Target Start/End: Complemental strand, 21066882 - 21066809
Alignment:
Q |
147 |
gatttatttatgttttataaaagtcttgattgaataccacaagannnnnnnattattaaaaagtcttttaaaat |
220 |
Q |
|
|
||||||||||| || ||||||||||||||||||||||||||| | ||| ||||||||||||||||||| |
|
|
T |
21066882 |
gatttatttatattctataaaagtcttgattgaataccacaaaacttttttatttttaaaaagtcttttaaaat |
21066809 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #15
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 168 - 244
Target Start/End: Complemental strand, 509661 - 509585
Alignment:
Q |
168 |
agtcttgattgaataccacaagannnnnnnattattaaaaagtcttttaaaatcccttcaaatcttaattcaataca |
244 |
Q |
|
|
||||||||||||||||||||||| || ||||||||||||||||||||||| | ||||| |||| ||||||| |
|
|
T |
509661 |
agtcttgattgaataccacaagactttttcataattaaaaagtcttttaaaatcccataaaatcctaatccaataca |
509585 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #16
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 165 - 244
Target Start/End: Complemental strand, 7993108 - 7993029
Alignment:
Q |
165 |
aaaagtcttgattgaataccacaagannnnnnnattattaaaaagtcttttaaaatcccttcaaatcttaattcaataca |
244 |
Q |
|
|
|||||||||||||||||||||||||| || |||||||||||||||||||||| | ||||||||| ||||||| |
|
|
T |
7993108 |
aaaagtcttgattgaataccacaagactttttcataattaaaaagtcttttaaaatcctatagaatcttaatccaataca |
7993029 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #17
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 165 - 236
Target Start/End: Complemental strand, 37327893 - 37327822
Alignment:
Q |
165 |
aaaagtcttgattgaataccacaagannnnnnnattattaaaaagtcttttaaaatcccttcaaatcttaat |
236 |
Q |
|
|
|||||||||||||||||||||||||| || ||||||||||||||||||||||| | ||||||||| |
|
|
T |
37327893 |
aaaagtcttgattgaataccacaagactttttcataattaaaaagtcttttaaaatcccattgaatcttaat |
37327822 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #18
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 204 - 254
Target Start/End: Original strand, 44623505 - 44623555
Alignment:
Q |
204 |
aaaaagtcttttaaaatcccttcaaatcttaattcaatacactctccttag |
254 |
Q |
|
|
||||| || |||||||||||||||||||||||| |||||||| |||||||| |
|
|
T |
44623505 |
aaaaaatcgtttaaaatcccttcaaatcttaatccaatacaccctccttag |
44623555 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #19
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 172 - 255
Target Start/End: Complemental strand, 47914232 - 47914149
Alignment:
Q |
172 |
ttgattgaataccacaagannnnnnnattattaaaaagtcttttaaaatcccttcaaatcttaattcaatacactctccttagt |
255 |
Q |
|
|
||||||||||||||||||| ||||| || ||||||||||||||||||| |||| | ||||||||||| ||||||||| |
|
|
T |
47914232 |
ttgattgaataccacaagactttttcattataaataagtcttttaaaatcccttagaatcatgattcaatacaccctccttagt |
47914149 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #20
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 147 - 245
Target Start/End: Original strand, 5572538 - 5572636
Alignment:
Q |
147 |
gatttatttatgttttataaaagtcttgattgaataccacaagannnnnnnattattaaaaagtcttttaaaatcccttcaaatcttaattcaatacac |
245 |
Q |
|
|
||||||||||| |||||||||||||||||||||||| || || ||||| |||||| ||||||||||| || |||||| |||||||||||| |
|
|
T |
5572538 |
gatttatttatattttataaaagtcttgattgaatatcaatggacgtttttattataaaaaagcattttaaaatccattaaaatctcaattcaatacac |
5572636 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #21
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 165 - 223
Target Start/End: Original strand, 48117827 - 48117885
Alignment:
Q |
165 |
aaaagtcttgattgaataccacaagannnnnnnattattaaaaagtcttttaaaatccc |
223 |
Q |
|
|
|||||||||||||||||||||||||| || ||||||||||||||||||||||| |
|
|
T |
48117827 |
aaaagtcttgattgaataccacaagactttttcataattaaaaagtcttttaaaatccc |
48117885 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #22
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 570 - 654
Target Start/End: Complemental strand, 48400020 - 48399931
Alignment:
Q |
570 |
gtctcaaaaagtctcaaggttttttgtgagattgttgaatgagcatttcatgtgtatt-----tttaactaaaaagtctcacaaaatcca |
654 |
Q |
|
|
||||| ||||||||||||| | ||||||||||||||||| ||| | | ||||||||| |||||||| |||||||||||||||||| |
|
|
T |
48400020 |
gtctcgaaaagtctcaaggatatttgtgagattgttgaaggagtgtattatgtgtatttttattttaactagaaagtctcacaaaatcca |
48399931 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #23
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 165 - 221
Target Start/End: Original strand, 29614998 - 29615054
Alignment:
Q |
165 |
aaaagtcttgattgaataccacaagannnnnnnattattaaaaagtcttttaaaatc |
221 |
Q |
|
|
|||||||||||||||||||||||||| || ||||||||||||||||||||| |
|
|
T |
29614998 |
aaaagtcttgattgaataccacaagactttttcataattaaaaagtcttttaaaatc |
29615054 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #24
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 165 - 244
Target Start/End: Complemental strand, 18838355 - 18838276
Alignment:
Q |
165 |
aaaagtcttgattgaataccacaagannnnnnnattattaaaaagtcttttaaaatcccttcaaatcttaattcaataca |
244 |
Q |
|
|
|||||||||||||||||||||||||| || |||||||||||||||| |||||| | |||| |||| ||||||| |
|
|
T |
18838355 |
aaaagtcttgattgaataccacaagacattttcataattaaaaagtcttttataatcccatagaatcctaatccaataca |
18838276 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #25
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 165 - 244
Target Start/End: Complemental strand, 28342313 - 28342234
Alignment:
Q |
165 |
aaaagtcttgattgaataccacaagannnnnnnattattaaaaagtcttttaaaatcccttcaaatcttaattcaataca |
244 |
Q |
|
|
|||| ||||||||||||||||||||| || ||||||||||||||||||||||| | |||| |||| ||||||| |
|
|
T |
28342313 |
aaaaatcttgattgaataccacaagactttttcataattaaaaagtcttttaaaatcccatagaatcctaatccaataca |
28342234 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #26
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 165 - 220
Target Start/End: Complemental strand, 39028063 - 39028008
Alignment:
Q |
165 |
aaaagtcttgattgaataccacaagannnnnnnattattaaaaagtcttttaaaat |
220 |
Q |
|
|
|||||||||||||||||||||||||| || |||||||||||||||||||| |
|
|
T |
39028063 |
aaaagtcttgattgaataccacaagactttttcataattaaaaagtcttttaaaat |
39028008 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #27
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 146 - 188
Target Start/End: Complemental strand, 41060086 - 41060044
Alignment:
Q |
146 |
agatttatttatgttttataaaagtcttgattgaataccacaa |
188 |
Q |
|
|
|||||||||||| ||| |||||| ||||||||||||||||||| |
|
|
T |
41060086 |
agatttatttatatttaataaaaatcttgattgaataccacaa |
41060044 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #28
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 165 - 244
Target Start/End: Complemental strand, 41827280 - 41827201
Alignment:
Q |
165 |
aaaagtcttgattgaataccacaagannnnnnnattattaaaaagtcttttaaaatcccttcaaatcttaattcaataca |
244 |
Q |
|
|
|||| ||||||||||||||||||||| || ||||||||||||||||||||||| | |||| |||| ||||||| |
|
|
T |
41827280 |
aaaattcttgattgaataccacaagactttttcataattaaaaagtcttttaaaatcccataaaattctaatccaataca |
41827201 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #29
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 562 - 592
Target Start/End: Original strand, 42677970 - 42678000
Alignment:
Q |
562 |
ttatgaatgtctcaaaaagtctcaaggtttt |
592 |
Q |
|
|
||||||||||||||||||||||||||||||| |
|
|
T |
42677970 |
ttatgaatgtctcaaaaagtctcaaggtttt |
42678000 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 165 - 223
Target Start/End: Complemental strand, 23101264 - 23101206
Alignment:
Q |
165 |
aaaagtcttgattgaataccacaagannnnnnnattattaaaaagtcttttaaaatccc |
223 |
Q |
|
|
|||| ||||||||||||||||||||| || ||||||||||||||||||||||| |
|
|
T |
23101264 |
aaaattcttgattgaataccacaagactttttcataattaaaaagtcttttaaaatccc |
23101206 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #31
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 625 - 654
Target Start/End: Complemental strand, 32630969 - 32630940
Alignment:
Q |
625 |
atttttaactaaaaagtctcacaaaatcca |
654 |
Q |
|
|
|||||||||||||||||||||||||||||| |
|
|
T |
32630969 |
atttttaactaaaaagtctcacaaaatcca |
32630940 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 621 - 654
Target Start/End: Original strand, 42678002 - 42678035
Alignment:
Q |
621 |
gtgtatttttaactaaaaagtctcacaaaatcca |
654 |
Q |
|
|
||||||||||||||||||||||||| |||||||| |
|
|
T |
42678002 |
gtgtatttttaactaaaaagtctcataaaatcca |
42678035 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #33
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 625 - 654
Target Start/End: Original strand, 48545633 - 48545662
Alignment:
Q |
625 |
atttttaactaaaaagtctcacaaaatcca |
654 |
Q |
|
|
|||||||||||||||||||||||||||||| |
|
|
T |
48545633 |
atttttaactaaaaagtctcacaaaatcca |
48545662 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #34
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 146 - 190
Target Start/End: Original strand, 9599048 - 9599092
Alignment:
Q |
146 |
agatttatttatgttttataaaagtcttgattgaataccacaaga |
190 |
Q |
|
|
||||||||||| |||||||||| |||||||||||||| |||||| |
|
|
T |
9599048 |
agatttatttaaattttataaaattcttgattgaatactacaaga |
9599092 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #35
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 146 - 190
Target Start/End: Original strand, 9826619 - 9826663
Alignment:
Q |
146 |
agatttatttatgttttataaaagtcttgattgaataccacaaga |
190 |
Q |
|
|
||||||||||| |||||||||| |||||||||||||| |||||| |
|
|
T |
9826619 |
agatttatttaaattttataaaattcttgattgaatactacaaga |
9826663 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #36
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 165 - 222
Target Start/End: Original strand, 9882470 - 9882527
Alignment:
Q |
165 |
aaaagtcttgattgaataccacaagannnnnnnattattaaaaagtcttttaaaatcc |
222 |
Q |
|
|
||||||||||||||||||||| |||| || |||||||||||||||||||||| |
|
|
T |
9882470 |
aaaagtcttgattgaataccataagactttttcataattaaaaagtcttttaaaatcc |
9882527 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #37
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 168 - 225
Target Start/End: Original strand, 10676615 - 10676672
Alignment:
Q |
168 |
agtcttgattgaataccacaagannnnnnnattattaaaaagtcttttaaaatccctt |
225 |
Q |
|
|
|||||||||| |||||||||||| || ||||||||||||||||||||||||| |
|
|
T |
10676615 |
agtcttgattaaataccacaagattttttcataattaaaaagtcttttaaaatccctt |
10676672 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #38
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 168 - 221
Target Start/End: Complemental strand, 29893086 - 29893033
Alignment:
Q |
168 |
agtcttgattgaataccacaagannnnnnnattattaaaaagtcttttaaaatc |
221 |
Q |
|
|
||||||||||||||||||||||| || ||||||||||||||||||||| |
|
|
T |
29893086 |
agtcttgattgaataccacaagactttttcataattaaaaagtcttttaaaatc |
29893033 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #39
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 168 - 221
Target Start/End: Original strand, 43187580 - 43187633
Alignment:
Q |
168 |
agtcttgattgaataccacaagannnnnnnattattaaaaagtcttttaaaatc |
221 |
Q |
|
|
||||||||||||||||||||||| || ||||||||||||||||||||| |
|
|
T |
43187580 |
agtcttgattgaataccacaagactctttcataattaaaaagtcttttaaaatc |
43187633 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #40
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 172 - 245
Target Start/End: Complemental strand, 47879134 - 47879061
Alignment:
Q |
172 |
ttgattgaataccacaagannnnnnnattattaaaaagtcttttaaaatcccttcaaatcttaattcaatacac |
245 |
Q |
|
|
||||||||||||||||||| ||||| || ||||||||||||||||||| |||| | ||||||||||| |
|
|
T |
47879134 |
ttgattgaataccacaagactttttcattataaataagtcttttaaaatcccttagaatcatgattcaatacac |
47879061 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0472 (Bit Score: 77; Significance: 2e-35; HSPs: 2)
Name: scaffold0472
Description:
Target: scaffold0472; HSP #1
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 562 - 654
Target Start/End: Original strand, 1635 - 1727
Alignment:
Q |
562 |
ttatgaatgtctcaaaaagtctcaaggttttttgtgagattgttgaatgagcatttcatgtgtatttttaactaaaaagtctcacaaaatcca |
654 |
Q |
|
|
|||||||||| ||||||||||||||||||||||||||||||||||||| ||||| ||| |||||||||||||||||||||||||||||||||| |
|
|
T |
1635 |
ttatgaatgtttcaaaaagtctcaaggttttttgtgagattgttgaattagcatgtcaagtgtatttttaactaaaaagtctcacaaaatcca |
1727 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0472; HSP #2
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 41 - 245
Target Start/End: Original strand, 1765 - 1967
Alignment:
Q |
41 |
aataccaatagacattttataagttactataaattctcaaatga-tgccatgggaattgattgccctggaataaaaaatcttgattgtcttngattcaat |
139 |
Q |
|
|
||||||||||||||||||||||||| || |||| || || ||| | |||||||| ||| ||||||| |||||||| | ||||||||||| |||| ||| |
|
|
T |
1765 |
aataccaatagacattttataagttggtacaaat-cttaattgaataccatgggatttggttgccctc-aataaaaagttttgattgtctt-gattgaat |
1861 |
T |
|
Q |
140 |
atcatgagatttatttatgttttataaaagtcttgattgaataccacaagannnnnnnattattaaaaagtcttttaaaatcccttcaaatcttaattca |
239 |
Q |
|
|
| || |||||||||||||||| |||||| |||| |||||||||||| | | |||||||||||||||||||||||| ||| ||||||| ||||| |
|
|
T |
1862 |
actataagatttatttatgtttcataaaaatcttaattgaataccaccaaatttttttattattaaaaagtcttttaaaatctcttaaaatcttgattca |
1961 |
T |
|
Q |
240 |
atacac |
245 |
Q |
|
|
|||||| |
|
|
T |
1962 |
atacac |
1967 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5 (Bit Score: 65; Significance: 3e-28; HSPs: 22)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 560 - 652
Target Start/End: Complemental strand, 36682231 - 36682139
Alignment:
Q |
560 |
agttatgaatgtctcaaaaagtctcaaggttttttgtgagattgttgaatgagcatttcatgtgtatttttaactaaaaagtctcacaaaatc |
652 |
Q |
|
|
||||||| |||||| ||||||| ||||||||||||||||||||||||||| ||||| ||||||||||||| ||||||||||||||| |||||| |
|
|
T |
36682231 |
agttatggatgtctgaaaaagtttcaaggttttttgtgagattgttgaataagcatgtcatgtgtattttcaactaaaaagtctcataaaatc |
36682139 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #2
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 575 - 654
Target Start/End: Original strand, 2275966 - 2276047
Alignment:
Q |
575 |
aaaaagtctcaaggtttt--ttgtgagattgttgaatgagcatttcatgtgtatttttaactaaaaagtctcacaaaatcca |
654 |
Q |
|
|
||||||| |||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||| |||||||||||||| |
|
|
T |
2275966 |
aaaaagtttcaaggttttttttgtgagattgttgaatgagcatgtcatgtgtatttttaactaaaaaatctcacaaaatcca |
2276047 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #3
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 562 - 652
Target Start/End: Original strand, 40460329 - 40460419
Alignment:
Q |
562 |
ttatgaatgtctcaaaaagtctcaaggttttttgtgagattgttgaatgagcatttcatgtgtatttttaactaaaaagtctcacaaaatc |
652 |
Q |
|
|
||||||| |||||||||||| ||||||||||| |||||||||||||||| ||| | ||||||||||| |||||||||||||| ||||||| |
|
|
T |
40460329 |
ttatgaaagtctcaaaaagtttcaaggtttttcatgagattgttgaatgaacatgttatgtgtattttcaactaaaaagtctcgcaaaatc |
40460419 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #4
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 146 - 232
Target Start/End: Original strand, 26795616 - 26795702
Alignment:
Q |
146 |
agatttatttatgttttataaaagtcttgattgaataccacaagannnnnnnattattaaaaagtcttttaaaatcccttcaaatct |
232 |
Q |
|
|
|||||||||||| |||||||||||||||||||||||||||||||| || || |||||||||||||||||||||| |||||| |
|
|
T |
26795616 |
agatttatttatattttataaaagtcttgattgaataccacaagatttttttataataaaaaagtcttttaaaatcccttgaaatct |
26795702 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #5
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 146 - 232
Target Start/End: Original strand, 26806680 - 26806766
Alignment:
Q |
146 |
agatttatttatgttttataaaagtcttgattgaataccacaagannnnnnnattattaaaaagtcttttaaaatcccttcaaatct |
232 |
Q |
|
|
|||||||||||| |||||||||||||||||||||||| ||||||| || || |||||||||||||||||||||| |||||| |
|
|
T |
26806680 |
agatttatttatattttataaaagtcttgattgaatatcacaagatttttttataataaaaaagtcttttaaaatcccttgaaatct |
26806766 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #6
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 590 - 654
Target Start/End: Original strand, 28594219 - 28594283
Alignment:
Q |
590 |
tttttgtgagattgttgaatgagcatttcatgtgtatttttaactaaaaagtctcacaaaatcca |
654 |
Q |
|
|
|||||||||||||||||||||||||||| || |||||||||||||||||||||||||||||| |
|
|
T |
28594219 |
tttttgtgagattgttgaatgagcattttattcacatttttaactaaaaagtctcacaaaatcca |
28594283 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #7
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 590 - 657
Target Start/End: Original strand, 9689123 - 9689190
Alignment:
Q |
590 |
tttttgtgagattgttgaatgagcatttcatgtgtatttttaactaaaaagtctcacaaaatccactc |
657 |
Q |
|
|
||||||||||||||||||||||| |||| | | |||||||||||||||||||||||||||| ||||| |
|
|
T |
9689123 |
tttttgtgagattgttgaatgagtattttgtttatatttttaactaaaaagtctcacaaaattcactc |
9689190 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #8
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 92 - 186
Target Start/End: Complemental strand, 39753588 - 39753496
Alignment:
Q |
92 |
ggaattgattgccctggaataaaaaatcttgattgtcttngattcaatatcatgagatttatttatgttttataaaagtcttgattgaataccac |
186 |
Q |
|
|
||||||| |||||||| ||||||| || |||||||||| |||| ||||||| |||||| ||||| |||||||||||||||||||||||||||| |
|
|
T |
39753588 |
ggaattggttgccctgaaataaaag-tcatgattgtctt-gattgaatatcacaagatttttttatattttataaaagtcttgattgaataccac |
39753496 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #9
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 146 - 244
Target Start/End: Original strand, 2276188 - 2276286
Alignment:
Q |
146 |
agatttatttatgttttataaaagtcttgattgaataccacaagannnnnnnattattaaaaagtcttttaaaatcccttcaaatcttaattcaataca |
244 |
Q |
|
|
||||||||||| |||||||||||||||||||||||||||| | | ||||| |||||| ||||||||||||||| || ||| ||||||||||| |
|
|
T |
2276188 |
agatttatttacattttataaaagtcttgattgaataccactaaatttttttattataaaaaagacttttaaaatcccttgaattctcaattcaataca |
2276286 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #10
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 146 - 190
Target Start/End: Original strand, 26806559 - 26806603
Alignment:
Q |
146 |
agatttatttatgttttataaaagtcttgattgaataccacaaga |
190 |
Q |
|
|
|||||||||||| |||||||||||||||||||||||||||||||| |
|
|
T |
26806559 |
agatttatttatattttataaaagtcttgattgaataccacaaga |
26806603 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #11
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 590 - 654
Target Start/End: Complemental strand, 27786509 - 27786445
Alignment:
Q |
590 |
tttttgtgagattgttgaatgagcatttcatgtgtatttttaactaaaaagtctcacaaaatcca |
654 |
Q |
|
|
|||||||||||||||||||||||||||| | |||||||||||||||||||||||||||||| |
|
|
T |
27786509 |
tttttgtgagattgttgaatgagcattttgttcacatttttaactaaaaagtctcacaaaatcca |
27786445 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #12
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 146 - 190
Target Start/End: Original strand, 28594425 - 28594469
Alignment:
Q |
146 |
agatttatttatgttttataaaagtcttgattgaataccacaaga |
190 |
Q |
|
|
||||||||||||||||||||||| ||||||||||||||||||||| |
|
|
T |
28594425 |
agatttatttatgttttataaaaatcttgattgaataccacaaga |
28594469 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #13
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 146 - 245
Target Start/End: Original strand, 9689319 - 9689418
Alignment:
Q |
146 |
agatttatttatgttttataaaagtcttgattgaataccacaagannnnnnnattattaaaaagtcttttaaaatcccttcaaatcttaattcaatacac |
245 |
Q |
|
|
|||||||||||| |||||||||| ||||||||||||||| ||||| || |||||||| |||||||||||| ||| |||||| ||| ||||||| |
|
|
T |
9689319 |
agatttatttatattttataaaaatcttgattgaatacctcaagatttttttataattaaaaaatcttttaaaatctcttgaaatctaaatcaaatacac |
9689418 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #14
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 168 - 254
Target Start/End: Complemental strand, 6460761 - 6460675
Alignment:
Q |
168 |
agtcttgattgaataccacaagannnnnnnattattaaaaagtcttttaaaatcccttcaaatcttaattcaatacactctccttag |
254 |
Q |
|
|
||||||||||||||||||||||| ||||| ||||| |||||||||||||||| |||| | ||||||||||| |||||||| |
|
|
T |
6460761 |
agtcttgattgaataccacaagactttttcattataaaaaaatcttttaaaatcccttagaatcatgattcaatacaccctccttag |
6460675 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #15
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 146 - 190
Target Start/End: Original strand, 26795495 - 26795539
Alignment:
Q |
146 |
agatttatttatgttttataaaagtcttgattgaataccacaaga |
190 |
Q |
|
|
|||||||||||| |||||||||||| ||||||||||||||||||| |
|
|
T |
26795495 |
agatttatttatattttataaaagttttgattgaataccacaaga |
26795539 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #16
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 165 - 244
Target Start/End: Original strand, 4550491 - 4550570
Alignment:
Q |
165 |
aaaagtcttgattgaataccacaagannnnnnnattattaaaaagtcttttaaaatcccttcaaatcttaattcaataca |
244 |
Q |
|
|
|||||||||||||||||||||||||| || ||||||||||||||||||||||| | |||| |||| ||||||| |
|
|
T |
4550491 |
aaaagtcttgattgaataccacaagactttttcataattaaaaagtcttttaaaatcccatagaatcctaatccaataca |
4550570 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #17
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 165 - 244
Target Start/End: Original strand, 14000339 - 14000418
Alignment:
Q |
165 |
aaaagtcttgattgaataccacaagannnnnnnattattaaaaagtcttttaaaatcccttcaaatcttaattcaataca |
244 |
Q |
|
|
|||||||||||||||||||||||||| || ||||||||||||||||||||||| | |||| |||| ||||||| |
|
|
T |
14000339 |
aaaagtcttgattgaataccacaagactttttcataattaaaaagtcttttaaaatcccatagaatcctaatccaataca |
14000418 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #18
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 204 - 245
Target Start/End: Complemental strand, 27786253 - 27786212
Alignment:
Q |
204 |
aaaaagtcttttaaaatcccttcaaatcttaattcaatacac |
245 |
Q |
|
|
|||||||||||||||||||||| |||||||||| |||||||| |
|
|
T |
27786253 |
aaaaagtcttttaaaatcccttgaaatcttaatccaatacac |
27786212 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #19
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 109 - 158
Target Start/End: Complemental strand, 36682032 - 36681984
Alignment:
Q |
109 |
aataaaaaatcttgattgtcttngattcaatatcatgagatttatttatg |
158 |
Q |
|
|
|||||||||||||||||||||| |||| |||| ||||||||||||||||| |
|
|
T |
36682032 |
aataaaaaatcttgattgtctt-gattgaataccatgagatttatttatg |
36681984 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #20
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 146 - 190
Target Start/End: Complemental strand, 378334 - 378290
Alignment:
Q |
146 |
agatttatttatgttttataaaagtcttgattgaataccacaaga |
190 |
Q |
|
|
||||||||||| ||||||| |||||||||||||||||||||||| |
|
|
T |
378334 |
agatttatttagattttatagaagtcttgattgaataccacaaga |
378290 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #21
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 165 - 221
Target Start/End: Complemental strand, 37013886 - 37013830
Alignment:
Q |
165 |
aaaagtcttgattgaataccacaagannnnnnnattattaaaaagtcttttaaaatc |
221 |
Q |
|
|
|||||||||||||||||||||||||| || ||||||||||||||||||||| |
|
|
T |
37013886 |
aaaagtcttgattgaataccacaagactttttcataattaaaaagtcttttaaaatc |
37013830 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #22
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 204 - 253
Target Start/End: Original strand, 6902692 - 6902741
Alignment:
Q |
204 |
aaaaagtcttttaaaatcccttcaaatcttaattcaatacactctcctta |
253 |
Q |
|
|
||||||||||||||||||| | ||||||| ||| |||||||| ||||||| |
|
|
T |
6902692 |
aaaaagtcttttaaaatccttccaaatctcaatccaatacacactcctta |
6902741 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4 (Bit Score: 65; Significance: 3e-28; HSPs: 30)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 132 - 245
Target Start/End: Complemental strand, 44646836 - 44646723
Alignment:
Q |
132 |
gattcaatatcatgagatttatttatgttttataaaagtcttgattgaataccacaagannnnnnnattattaaaaagtcttttaaaatcccttcaaatc |
231 |
Q |
|
|
|||| |||| ||| ||||||||||||||||||||||||||||||||||||||||||||| || ||||||||||||||||||||| ||| ||||| |
|
|
T |
44646836 |
gattgaataccataagatttatttatgttttataaaagtcttgattgaataccacaagatttttttatcattaaaaagtcttttaaaatctcttgaaatc |
44646737 |
T |
|
Q |
232 |
ttaattcaatacac |
245 |
Q |
|
|
|| ||||||||||| |
|
|
T |
44646736 |
ttgattcaatacac |
44646723 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #2
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 557 - 643
Target Start/End: Complemental strand, 44647051 - 44646965
Alignment:
Q |
557 |
aaaagttatgaatgtctcaaaaagtctcaaggttttttgtgagattgttgaatgagcatttcatgtgtatttttaactaaaaagtct |
643 |
Q |
|
|
|||| |||||||||||||||||||| ||||| |||| ||||||||| |||||||||||| ||||||||||||||||||||||||||| |
|
|
T |
44647051 |
aaaacttatgaatgtctcaaaaagtttcaagattttatgtgagattcttgaatgagcatgtcatgtgtatttttaactaaaaagtct |
44646965 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #3
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 553 - 657
Target Start/End: Complemental strand, 53272252 - 53272148
Alignment:
Q |
553 |
aaacaaaagttatgaatgtctcaaaaagtctcaaggttttttgtgagattgttgaatgagcatttcatgtgtatttttaactaaaaagtctcacaaaatc |
652 |
Q |
|
|
|||||||| ||||| ||||| ||||||||||||| | |||||||||||||||||| ||||| | ||||||||||||| |||||||||||||||||||| |
|
|
T |
53272252 |
aaacaaaaattatgggagtctctaaaagtctcaaggatatttgtgagattgttgaataagcatgttatgtgtatttttagctaaaaagtctcacaaaatc |
53272153 |
T |
|
Q |
653 |
cactc |
657 |
Q |
|
|
||||| |
|
|
T |
53272152 |
cactc |
53272148 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #4
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 112 - 255
Target Start/End: Original strand, 28100532 - 28100675
Alignment:
Q |
112 |
aaaaaatcttgattgtcttngattcaatatcatgagatttatttatgttttataaaagtcttgattgaataccacaagannnnnnnattat-taaaaagt |
210 |
Q |
|
|
||||| ||||||||||||| |||| |||| ||| |||||||||||| |||||||||||||||||||||||||||||||| || || ||||||| |
|
|
T |
28100532 |
aaaaagtcttgattgtctt-gattgaataccataagatttatttatattttataaaagtcttgattgaataccacaagacttttttataataaaaaaagt |
28100630 |
T |
|
Q |
211 |
cttttaaaatcccttcaaatcttaattcaatacactctccttagt |
255 |
Q |
|
|
||||||||| ||||| ||||| ||| |||||||| | ||||||| |
|
|
T |
28100631 |
cttttaaaaccccttgaaatcccaatccaatacaccccccttagt |
28100675 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #5
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 112 - 257
Target Start/End: Complemental strand, 38230906 - 38230762
Alignment:
Q |
112 |
aaaaaatcttgattgtcttngattcaatatcatgagatttatttatgttttataaaagtcttgattgaataccacaagannnnnnnattattaaaaagtc |
211 |
Q |
|
|
||||| || |||||||||| |||| |||| || |||||| |||| |||||||||||||||||||||||||||| ||| ||| | |||||||| |
|
|
T |
38230906 |
aaaaagtcatgattgtctt-gattgaataccacaagatttgtttaaattttataaaagtcttgattgaataccactagactttttcattctaaaaaagtc |
38230808 |
T |
|
Q |
212 |
ttttaaaatcccttcaaatcttaattcaatacactctccttagttt |
257 |
Q |
|
|
|||||||||||||| ||||| |||||||||||| | ||||||||| |
|
|
T |
38230807 |
ttttaaaatcccttgaaatcccaattcaatacaccccccttagttt |
38230762 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #6
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 108 - 245
Target Start/End: Complemental strand, 53272047 - 53271911
Alignment:
Q |
108 |
gaataaaaaatcttgattgtcttngattcaatatcatgagatttatttatgttttataaaagtcttgattgaataccacaagannnnnnnattattaaaa |
207 |
Q |
|
|
||||||||| ||||||||||||| |||| |||| || | |||||||||| || ||||||||||||||||||||| ||||||| ||| | |||| |
|
|
T |
53272047 |
gaataaaaagtcttgattgtctt-gattgaataccacaatatttatttatattatataaaagtcttgattgaatatcacaagacttttttattttaaaaa |
53271949 |
T |
|
Q |
208 |
agtcttttaaaatcccttcaaatcttaattcaatacac |
245 |
Q |
|
|
|||||||||||||||| | ||||| |||||||||||| |
|
|
T |
53271948 |
agtcttttaaaatcccatgaaatcccaattcaatacac |
53271911 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #7
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 570 - 657
Target Start/End: Complemental strand, 16653580 - 16653493
Alignment:
Q |
570 |
gtctcaaaaagtctcaaggttttttgtgagattgttgaatgagcatttcatgtgtatttttaactaaaaagtctcacaaaatccactc |
657 |
Q |
|
|
|||||||||||||||||||||| ||||| ||||||||||||| || | |||| ||||||||| |||||||||||| ||||| ||||| |
|
|
T |
16653580 |
gtctcaaaaagtctcaaggtttaatgtgacattgttgaatgagtatgttatgtatatttttaagtaaaaagtctcataaaattcactc |
16653493 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #8
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 132 - 185
Target Start/End: Original strand, 36094278 - 36094331
Alignment:
Q |
132 |
gattcaatatcatgagatttatttatgttttataaaagtcttgattgaatacca |
185 |
Q |
|
|
|||| |||||||| | ||||||||||||||||||||| |||||||||||||||| |
|
|
T |
36094278 |
gattgaatatcataatatttatttatgttttataaaaatcttgattgaatacca |
36094331 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #9
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 165 - 245
Target Start/End: Complemental strand, 37915756 - 37915676
Alignment:
Q |
165 |
aaaagtcttgattgaataccacaagannnnnnnattattaaaaagtcttttaaaatcccttcaaatcttaattcaatacac |
245 |
Q |
|
|
|||||||||||||||||||||||||| || ||||||||||||||||||||||| | |||| |||| |||||||| |
|
|
T |
37915756 |
aaaagtcttgattgaataccacaagactttttcataattaaaaagtcttttaaaatcccatagaatcataatccaatacac |
37915676 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #10
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 165 - 244
Target Start/End: Complemental strand, 5441375 - 5441296
Alignment:
Q |
165 |
aaaagtcttgattgaataccacaagannnnnnnattattaaaaagtcttttaaaatcccttcaaatcttaattcaataca |
244 |
Q |
|
|
|||||||||||||||||||||||||| || ||||||||||||||||||||||| | |||| |||| ||||||| |
|
|
T |
5441375 |
aaaagtcttgattgaataccacaagactttttcataattaaaaagtcttttaaaatcccatagaatcctaatccaataca |
5441296 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #11
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 165 - 244
Target Start/End: Original strand, 30967534 - 30967613
Alignment:
Q |
165 |
aaaagtcttgattgaataccacaagannnnnnnattattaaaaagtcttttaaaatcccttcaaatcttaattcaataca |
244 |
Q |
|
|
|||||||||||||||||||||||||| || |||||||| |||||||||||||| | ||||| |||| ||||||| |
|
|
T |
30967534 |
aaaagtcttgattgaataccacaagactttttcataattaaaaaatcttttaaaatcccataaaatcataatccaataca |
30967613 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #12
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 112 - 245
Target Start/End: Complemental strand, 41762114 - 41761981
Alignment:
Q |
112 |
aaaaaatcttgattgtcttngattcaatatcatgagatttatttatgttttataaaa-gtcttgattgaataccacaagannnnnnnattattaaaaagt |
210 |
Q |
|
|
||||| ||||||||||||| | || |||| || ||| |||||||| |||||||||| ||||||||| |||||||||||| || || | ||||| |
|
|
T |
41762114 |
aaaaagtcttgattgtcttag-ttgaataccacaagacttatttatattttataaaaagtcttgattcaataccacaagacttttttataatcacaaagt |
41762016 |
T |
|
Q |
211 |
cttttaaaatcccttcaaatcttaattcaatacac |
245 |
Q |
|
|
|||||||||||| || |||||| ||| |||||||| |
|
|
T |
41762015 |
cttttaaaatcctttaaaatctcaatccaatacac |
41761981 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #13
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 146 - 253
Target Start/End: Complemental strand, 53594187 - 53594080
Alignment:
Q |
146 |
agatttatttatgttttataaaagtcttgattgaataccacaagannnnnnnattattaaaaagtcttttaaaatcccttcaaatcttaattcaatacac |
245 |
Q |
|
|
|||||||||||| |||||||||| | |||||||||| |||||||| || || ||||||||||||||||| | || |||||| |||| |||| || |
|
|
T |
53594187 |
agatttatttatattttataaaatttttgattgaatgccacaagacttttctataataaaaaagtcttttaaaattcattgaaatctcaatttaatatac |
53594088 |
T |
|
Q |
246 |
tctcctta |
253 |
Q |
|
|
||||||| |
|
|
T |
53594087 |
cctcctta |
53594080 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #14
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 165 - 244
Target Start/End: Complemental strand, 54341115 - 54341036
Alignment:
Q |
165 |
aaaagtcttgattgaataccacaagannnnnnnattattaaaaagtcttttaaaatcccttcaaatcttaattcaataca |
244 |
Q |
|
|
|||||||||||||||||||||||||| || ||||||||||||||||||||||| | |||| |||| ||||||| |
|
|
T |
54341115 |
aaaagtcttgattgaataccacaagactttttcataattaaaaagtcttttaaaatcccatagaatcctaatccaataca |
54341036 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #15
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 146 - 244
Target Start/End: Original strand, 28847085 - 28847183
Alignment:
Q |
146 |
agatttatttatgttttataaaagtcttgattgaataccacaagannnnnnnattattaaaaagtcttttaaaatcccttcaaatcttaattcaataca |
244 |
Q |
|
|
|||||||||| ||| |||||||| ||||||||||||||| ||| ||||| ||||||||||||||||||| || |||||| ||| ||||||| |
|
|
T |
28847085 |
agatttattttcatttcataaaagttttgattgaataccactagacttttttattataaaaaagtcttttaaaatcctttaaaatctcaatccaataca |
28847183 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #16
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 148 - 245
Target Start/End: Complemental strand, 16653353 - 16653256
Alignment:
Q |
148 |
atttatttatgttttataaaagtcttgattgaataccacaagannnnnnnattattaaaaagtcttttaaaatcccttcaaatcttaattcaatacac |
245 |
Q |
|
|
|||||| ||| |||||||||| ||||||||||||||||||||| || |||||| |||||||||||| || | ||||| |||||||||||| |
|
|
T |
16653353 |
atttatgtatattttataaaattcttgattgaataccacaagacttttttttttttaaaatgtcttttaaaattccatgaaatcccaattcaatacac |
16653256 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #17
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 168 - 225
Target Start/End: Original strand, 32951074 - 32951131
Alignment:
Q |
168 |
agtcttgattgaataccacaagannnnnnnattattaaaaagtcttttaaaatccctt |
225 |
Q |
|
|
||||||||||||||||||||||| ||||| |||||||||||||||||||||| |
|
|
T |
32951074 |
agtcttgattgaataccacaagactttttcattataaaaaagtcttttaaaatccctt |
32951131 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #18
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 146 - 186
Target Start/End: Original strand, 37370870 - 37370910
Alignment:
Q |
146 |
agatttatttatgttttataaaagtcttgattgaataccac |
186 |
Q |
|
|
|||||||||||| |||||||||||| ||||||||||||||| |
|
|
T |
37370870 |
agatttatttatattttataaaagttttgattgaataccac |
37370910 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #19
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 168 - 244
Target Start/End: Complemental strand, 20021312 - 20021236
Alignment:
Q |
168 |
agtcttgattgaataccacaagannnnnnnattattaaaaagtcttttaaaatcccttcaaatcttaattcaataca |
244 |
Q |
|
|
|||||||||| |||||||||||| || ||||||||||||||||||||||||| |||| |||| ||||||| |
|
|
T |
20021312 |
agtcttgattaaataccacaagactttttcataattaaaaagtcttttaaaatcccttaaaattataatccaataca |
20021236 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #20
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 172 - 244
Target Start/End: Complemental strand, 23987220 - 23987148
Alignment:
Q |
172 |
ttgattgaataccacaagannnnnnnattattaaaaagtcttttaaaatcccttcaaatcttaattcaataca |
244 |
Q |
|
|
||||||||||||||||||| || ||||||||||||||||||||||| | ||||| |||| ||||||| |
|
|
T |
23987220 |
ttgattgaataccacaagactttttcataattaaaaagtcttttaaaatcccataaaatcctaatccaataca |
23987148 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #21
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 165 - 221
Target Start/End: Original strand, 37828637 - 37828693
Alignment:
Q |
165 |
aaaagtcttgattgaataccacaagannnnnnnattattaaaaagtcttttaaaatc |
221 |
Q |
|
|
|||||||||||||||||||||||||| || ||||||||||||||||||||| |
|
|
T |
37828637 |
aaaagtcttgattgaataccacaagactttttcataattaaaaagtcttttaaaatc |
37828693 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #22
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 146 - 188
Target Start/End: Original strand, 1848510 - 1848552
Alignment:
Q |
146 |
agatttatttatgttttataaaagtcttgattgaataccacaa |
188 |
Q |
|
|
|||||||||||| ||||||||||||||||||| ||||| |||| |
|
|
T |
1848510 |
agatttatttatattttataaaagtcttgattaaatacaacaa |
1848552 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #23
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 108 - 185
Target Start/End: Complemental strand, 20539070 - 20538993
Alignment:
Q |
108 |
gaataaaaaatcttgattgtcttngattcaatatcatgagatttatttatgttttataaaa-gtcttgattgaatacca |
185 |
Q |
|
|
||||||||| |||| |||||||| |||| |||| || |||||||||||| |||| ||||| ||||||||||||||||| |
|
|
T |
20539070 |
gaataaaaagtcttaattgtctt-gattgaataccacaagatttatttatattttgtaaaaagtcttgattgaatacca |
20538993 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #24
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 165 - 244
Target Start/End: Complemental strand, 27768027 - 27767948
Alignment:
Q |
165 |
aaaagtcttgattgaataccacaagannnnnnnattattaaaaagtcttttaaaatcccttcaaatcttaattcaataca |
244 |
Q |
|
|
|||| ||||||||||||||||||||| || ||||||||||||||||||||||| | |||| |||| ||||||| |
|
|
T |
27768027 |
aaaaatcttgattgaataccacaagactttttcataattaaaaagtcttttaaaatcccatagaatcctaatccaataca |
27767948 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #25
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 165 - 244
Target Start/End: Complemental strand, 28483954 - 28483875
Alignment:
Q |
165 |
aaaagtcttgattgaataccacaagannnnnnnattattaaaaagtcttttaaaatcccttcaaatcttaattcaataca |
244 |
Q |
|
|
|||||||||||||||||||| ||||| || ||||||||||||||||||||| | | |||| |||||||||||| |
|
|
T |
28483954 |
aaaagtcttgattgaatacctcaagactttttcataattaaaaagtcttttaaaatctcatagaatcctaattcaataca |
28483875 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #26
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 624 - 654
Target Start/End: Complemental strand, 38231044 - 38231014
Alignment:
Q |
624 |
tatttttaactaaaaagtctcacaaaatcca |
654 |
Q |
|
|
||||||||||||||||||||||||||||||| |
|
|
T |
38231044 |
tatttttaactaaaaagtctcacaaaatcca |
38231014 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #27
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 577 - 651
Target Start/End: Complemental strand, 47301627 - 47301553
Alignment:
Q |
577 |
aaagtctcaaggttttttgtgagattgttgaatgagcatttcatgtgtatttttaactaaaaagtctcacaaaat |
651 |
Q |
|
|
|||||||| || |||||| |||||||||||| | | || | ||||||||||| ||||||||||| ||||||||| |
|
|
T |
47301627 |
aaagtctcgagattttttatgagattgttgattaaatatgttatgtgtattttcaactaaaaagtttcacaaaat |
47301553 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #28
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 168 - 251
Target Start/End: Complemental strand, 55302811 - 55302728
Alignment:
Q |
168 |
agtcttgattgaataccacaagannnnnnnattattaaaaagtcttttaaaatcccttcaaatcttaattcaatacactctcct |
251 |
Q |
|
|
|||||||||||||||||| || | ||||| |||||||||| ||||||||||| ||||| | ||||||||||| ||||| |
|
|
T |
55302811 |
agtcttgattgaataccataacactttttcattataaaaaagtcttctaaaatcccttaaaatcatgattcaatacaccctcct |
55302728 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #29
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 625 - 654
Target Start/End: Complemental strand, 5117233 - 5117204
Alignment:
Q |
625 |
atttttaactaaaaagtctcacaaaatcca |
654 |
Q |
|
|
|||||||||||||||||||||||||||||| |
|
|
T |
5117233 |
atttttaactaaaaagtctcacaaaatcca |
5117204 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 165 - 223
Target Start/End: Original strand, 49835048 - 49835106
Alignment:
Q |
165 |
aaaagtcttgattgaataccacaagannnnnnnattattaaaaagtcttttaaaatccc |
223 |
Q |
|
|
|||||| ||||||||||||||||||| || ||||||||||||||||||||||| |
|
|
T |
49835048 |
aaaagttttgattgaataccacaagactttttcataattaaaaagtcttttaaaatccc |
49835106 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8 (Bit Score: 50; Significance: 3e-19; HSPs: 12)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 592 - 657
Target Start/End: Complemental strand, 14061850 - 14061785
Alignment:
Q |
592 |
tttgtgagattgttgaatgagcatttcatgtgtatttttaactaaaaagtctcacaaaatccactc |
657 |
Q |
|
|
|||||||||||||||||| ||||| | ||||||||||||| ||||||||||||||||||||||||| |
|
|
T |
14061850 |
tttgtgagattgttgaataagcatgttatgtgtatttttagctaaaaagtctcacaaaatccactc |
14061785 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #2
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 108 - 190
Target Start/End: Complemental strand, 14061684 - 14061603
Alignment:
Q |
108 |
gaataaaaaatcttgattgtcttngattcaatatcatgagatttatttatgttttataaaagtcttgattgaataccacaaga |
190 |
Q |
|
|
||||||||| ||||||||||||| |||| |||| || |||||||||||| || ||||||| ||||||||||||||||||||| |
|
|
T |
14061684 |
gaataaaaagtcttgattgtctt-gattgaataccacaagatttatttatattctataaaaatcttgattgaataccacaaga |
14061603 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #3
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 600 - 651
Target Start/End: Original strand, 39038909 - 39038962
Alignment:
Q |
600 |
attgttgaatgagcatttcatgtgta--tttttaactaaaaagtctcacaaaat |
651 |
Q |
|
|
|||||||||||||||||||||||||| |||||||||||||||||||||||||| |
|
|
T |
39038909 |
attgttgaatgagcatttcatgtgtatttttttaactaaaaagtctcacaaaat |
39038962 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #4
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 165 - 244
Target Start/End: Original strand, 14782369 - 14782448
Alignment:
Q |
165 |
aaaagtcttgattgaataccacaagannnnnnnattattaaaaagtcttttaaaatcccttcaaatcttaattcaataca |
244 |
Q |
|
|
|||||||||||||||||||||||||| || ||||||||||||||||||||||| | |||| |||| ||||||| |
|
|
T |
14782369 |
aaaagtcttgattgaataccacaagactttttcataattaaaaagtcttttaaaatcccatagaatcctaatccaataca |
14782448 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #5
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 165 - 244
Target Start/End: Complemental strand, 32497455 - 32497376
Alignment:
Q |
165 |
aaaagtcttgattgaataccacaagannnnnnnattattaaaaagtcttttaaaatcccttcaaatcttaattcaataca |
244 |
Q |
|
|
|||||||||||||||||||||||||| || ||||||||||||||||||||||| | |||| |||| ||||||| |
|
|
T |
32497455 |
aaaagtcttgattgaataccacaagactttttcatgattaaaaagtcttttaaaatcccatagaatcctaatccaataca |
32497376 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #6
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 165 - 244
Target Start/End: Original strand, 44726044 - 44726123
Alignment:
Q |
165 |
aaaagtcttgattgaataccacaagannnnnnnattattaaaaagtcttttaaaatcccttcaaatcttaattcaataca |
244 |
Q |
|
|
|||||||||||||||||||||||||| || ||||||||||||||||||||||| | |||| |||| ||||||| |
|
|
T |
44726044 |
aaaagtcttgattgaataccacaagactttttcataattaaaaagtcttttaaaatcccatagaatcctaatccaataca |
44726123 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #7
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 108 - 182
Target Start/End: Original strand, 39039066 - 39039140
Alignment:
Q |
108 |
gaataaaaaatcttgattgtcttngattcaatatcatgagatttatttatgttttata--aaagtcttgattgaata |
182 |
Q |
|
|
||||||||||||||||||||||| |||| |||| ||| |||||||||||| || |||| ||||||||||||||||| |
|
|
T |
39039066 |
gaataaaaaatcttgattgtctt-gattgaataccat-agatttatttatattctataagaaagtcttgattgaata |
39039140 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #8
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 172 - 253
Target Start/End: Complemental strand, 42937325 - 42937244
Alignment:
Q |
172 |
ttgattgaataccacaagannnnnnnattattaaaaagtcttttaaaatcccttcaaatcttaattcaatacactctcctta |
253 |
Q |
|
|
||||||||||||||||||| || || |||||||||||||||||||||| ||||| | || |||||||| ||||||| |
|
|
T |
42937325 |
ttgattgaataccacaagactttttcatgataaaaaagtcttttaaaatcccttaaaatcatgatccaatacaccctcctta |
42937244 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #9
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 165 - 221
Target Start/End: Original strand, 39467701 - 39467757
Alignment:
Q |
165 |
aaaagtcttgattgaataccacaagannnnnnnattattaaaaagtcttttaaaatc |
221 |
Q |
|
|
|||||||||||||||||||||||||| || ||||||||||||||||||||| |
|
|
T |
39467701 |
aaaagtcttgattgaataccacaagactttttcataattaaaaagtcttttaaaatc |
39467757 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #10
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 165 - 244
Target Start/End: Original strand, 4031492 - 4031571
Alignment:
Q |
165 |
aaaagtcttgattgaataccacaagannnnnnnattattaaaaagtcttttaaaatcccttcaaatcttaattcaataca |
244 |
Q |
|
|
|||||||||||| ||||||||||||| || ||||||||||||||||||||||| | |||| |||| ||||||| |
|
|
T |
4031492 |
aaaagtcttgatcgaataccacaagactttttcataattaaaaagtcttttaaaatcccatagaatcctaatccaataca |
4031571 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #11
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 165 - 244
Target Start/End: Original strand, 10295615 - 10295694
Alignment:
Q |
165 |
aaaagtcttgattgaataccacaagannnnnnnattattaaaaagtcttttaaaatcccttcaaatcttaattcaataca |
244 |
Q |
|
|
|||||||||||||||||||||||||| || |||||||| |||||||||||||| | |||| |||| ||||||| |
|
|
T |
10295615 |
aaaagtcttgattgaataccacaagactttttcataattaaaaactcttttaaaatcccatagaatcctaatccaataca |
10295694 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #12
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 146 - 186
Target Start/End: Complemental strand, 24318012 - 24317972
Alignment:
Q |
146 |
agatttatttatgttttataaaagtcttgattgaataccac |
186 |
Q |
|
|
||||| |||||| || ||||||||||||||||||||||||| |
|
|
T |
24318012 |
agattaatttatattatataaaagtcttgattgaataccac |
24317972 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0287 (Bit Score: 37; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0287
Description:
Target: scaffold0287; HSP #1
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 148 - 245
Target Start/End: Original strand, 11773 - 11870
Alignment:
Q |
148 |
atttatttatgttttataaaagtcttgattgaataccacaagannnnnnnattattaaaaagtcttttaaaatcccttcaaatcttaattcaatacac |
245 |
Q |
|
|
||||| |||| |||||||||||||||||||||||| ||||||| || || ||||||||||||||||||||| ||||| ||| |||||||| |
|
|
T |
11773 |
atttacttatattttataaaagtcttgattgaatatcacaagacttttttataataaaaaagtcttttaaaatccctagaaatccgaatccaatacac |
11870 |
T |
|
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold1504 (Bit Score: 35; Significance: 0.0000000002; HSPs: 1)
Name: scaffold1504
Description:
Target: scaffold1504; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 165 - 244
Target Start/End: Complemental strand, 835 - 756
Alignment:
Q |
165 |
aaaagtcttgattgaataccacaagannnnnnnattattaaaaagtcttttaaaatcccttcaaatcttaattcaataca |
244 |
Q |
|
|
|||||||||||||||||||||||||| || ||||||||||||||||||||||| | |||| |||| ||||||| |
|
|
T |
835 |
aaaagtcttgattgaataccacaagaatttttcataattaaaaagtcttttaaaatcccatagaatcctaatccaataca |
756 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0543 (Bit Score: 35; Significance: 0.0000000002; HSPs: 1)
Name: scaffold0543
Description:
Target: scaffold0543; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 165 - 244
Target Start/End: Complemental strand, 10532 - 10453
Alignment:
Q |
165 |
aaaagtcttgattgaataccacaagannnnnnnattattaaaaagtcttttaaaatcccttcaaatcttaattcaataca |
244 |
Q |
|
|
|||||||||||||||||||||||||| || ||||||||||||||||||||||| | |||| |||| ||||||| |
|
|
T |
10532 |
aaaagtcttgattgaataccacaagactttttcataattaaaaagtcttttaaaatcccatagaatcctaatccaataca |
10453 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0042 (Bit Score: 35; Significance: 0.0000000002; HSPs: 1)
Name: scaffold0042
Description:
Target: scaffold0042; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 165 - 244
Target Start/End: Original strand, 58269 - 58348
Alignment:
Q |
165 |
aaaagtcttgattgaataccacaagannnnnnnattattaaaaagtcttttaaaatcccttcaaatcttaattcaataca |
244 |
Q |
|
|
|||||||||||||||||||||||||| || ||||||||||||||||||||||| | |||| |||| ||||||| |
|
|
T |
58269 |
aaaagtcttgattgaataccacaagactttttcataattaaaaagtcttttaaaatcccatggaatcctaatccaataca |
58348 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0347 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0347
Description:
Target: scaffold0347; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 165 - 221
Target Start/End: Complemental strand, 14867 - 14811
Alignment:
Q |
165 |
aaaagtcttgattgaataccacaagannnnnnnattattaaaaagtcttttaaaatc |
221 |
Q |
|
|
|||||||||||||||||||||||||| || ||||||||||||||||||||| |
|
|
T |
14867 |
aaaagtcttgattgaataccacaagactttttcataattaaaaagtcttttaaaatc |
14811 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0306 (Bit Score: 29; Significance: 0.0000009; HSPs: 1)
Name: scaffold0306
Description:
Target: scaffold0306; HSP #1
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 168 - 221
Target Start/End: Complemental strand, 13893 - 13840
Alignment:
Q |
168 |
agtcttgattgaataccacaagannnnnnnattattaaaaagtcttttaaaatc |
221 |
Q |
|
|
||||||||||||||||||||||| || ||||||||||||||||||||| |
|
|
T |
13893 |
agtcttgattgaataccacaagactttttcataattaaaaagtcttttaaaatc |
13840 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0152 (Bit Score: 29; Significance: 0.0000009; HSPs: 1)
Name: scaffold0152
Description:
Target: scaffold0152; HSP #1
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 168 - 221
Target Start/End: Original strand, 21434 - 21487
Alignment:
Q |
168 |
agtcttgattgaataccacaagannnnnnnattattaaaaagtcttttaaaatc |
221 |
Q |
|
|
||||||||||||||||||||||| || ||||||||||||||||||||| |
|
|
T |
21434 |
agtcttgattgaataccacaagactttttcataattaaaaagtcttttaaaatc |
21487 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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