View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
Legend |
| Query |
| Query hiting target |
| Query hiting target's complemental strand |
| Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: J5_16_58 (Length: 243)
Name: J5_16_58
Description: Pascalseqs
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
[»] J5_16_58 |
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[»] scaffold0643 (1 HSPs) |
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[»] scaffold0789 (1 HSPs) |
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[»] scaffold0040 (1 HSPs) |
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[»] scaffold0011 (1 HSPs) |
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[»] scaffold1964 (1 HSPs) |
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Alignment Details
Target: chr5 (Bit Score: 198; Significance: 1e-108; HSPs: 10)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 198; E-Value: 1e-108
Query Start/End: Original strand, 1 - 227
Target Start/End: Original strand, 36044823 - 36045048
Alignment:
Q |
1 |
tacttgtgatgccttccatactactcagagacgactactttgaatttaggtgcattatttcttcctgtcgtactctagttagttannnnnnnaccaactc |
100 |
Q |
|
|
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |
|
|
T |
36044823 |
tacttgtgatgccttccatactactca-agacgactactttgaatttaggtgcattatttcttcctgtcgtactctagttagttatttttttaccaactc |
36044921 |
T |
|
Q |
101 |
tagagtgaagtttgttaggcgacaagccaatgaggttgctcatattcttgtaggagaagccacattactagctagtcccaccatttattttcatatgccc |
200 |
Q |
|
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
T |
36044922 |
tagagtgaagtttgttaggcgacaagccaatgaggttgctcatattcttgtaggagaagccacattactagctagtcccaccatttattttcatatgccc |
36045021 |
T |
|
Q |
201 |
gaatgtattgaatctcttattattaat |
227 |
Q |
|
|
||||||||||||||||||||||||||| |
|
|
T |
36045022 |
gaatgtattgaatctcttattattaat |
36045048 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #2
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 94 - 179
Target Start/End: Complemental strand, 19741672 - 19741587
Alignment:
Q |
94 |
ccaactctagagtgaagtttgttaggcgacaagccaatgaggttgctcatattcttgtaggagaagccacattactagctagtccc |
179 |
Q |
|
|
|||||||||| ||||| ||||||||||||||||| || | |||||||||| ||||| | |||||||||||||||||||||||||| |
|
|
T |
19741672 |
ccaactctagggtgaaatttgttaggcgacaagctaacggggttgctcatgctcttgcaagagaagccacattactagctagtccc |
19741587 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #3
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 93 - 227
Target Start/End: Complemental strand, 29755096 - 29754963
Alignment:
Q |
93 |
accaactctagagtgaagtttgttaggcgacaagccaatgaggttgctcatattcttgtaggagaagccacattactagctagtcccaccatttattttc |
192 |
Q |
|
|
||||||||||| ||| ||||||||||||||||||| |||| ||| ||||| | ||||| | |||||||||||| || ||||||||| | || ||||||| |
|
|
T |
29755096 |
accaactctagggtggagtttgttaggcgacaagctaatgtggtggctcacactcttgca-aagaagccacatttctcgctagtcccgctatctattttc |
29754998 |
T |
|
Q |
193 |
atatgcccgaatgtattgaatctcttattattaat |
227 |
Q |
|
|
|||| ||| | ||||||||| || | ||||||||| |
|
|
T |
29754997 |
atatacccaattgtattgaaactttgattattaat |
29754963 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #4
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 93 - 196
Target Start/End: Original strand, 19237663 - 19237766
Alignment:
Q |
93 |
accaactctagagtgaagtttgttaggcgacaagccaatgaggttgctcatattcttgtaggagaagccacattactagctagtcccaccatttattttc |
192 |
Q |
|
|
||||||||||| ||| ||||| ||||||||||||| ||||||||||||||| |||||| | |||| | ||| ||||||||| | |||| ||||||||| |
|
|
T |
19237663 |
accaactctagggtggagtttattaggcgacaagcaaatgaggttgctcatgttcttgcaagagaggtcacgctactagctaattccactgtttattttc |
19237762 |
T |
|
Q |
193 |
atat |
196 |
Q |
|
|
|||| |
|
|
T |
19237763 |
atat |
19237766 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #5
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 96 - 223
Target Start/End: Original strand, 22292379 - 22292506
Alignment:
Q |
96 |
aactctagagtgaagtttgttaggcgacaagccaatgaggttgctcatattcttgtaggagaagccacattactagctagtcccaccatttattttcata |
195 |
Q |
|
|
|||||||| ||| |||||||||||||||||||||| | |||||||||| ||||| | | || ||||| | ||||||||||| || |||||||| ||| |
|
|
T |
22292379 |
aactctagggtggagtttgttaggcgacaagccaacgtggttgctcatgctcttgcaagggaggccacgtctttagctagtcccgccgtttattttaata |
22292478 |
T |
|
Q |
196 |
tgcccgaatgtattgaatctcttattat |
223 |
Q |
|
|
| ||| | ||||||||| |||||||||| |
|
|
T |
22292479 |
tacccaattgtattgaaactcttattat |
22292506 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #6
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 94 - 179
Target Start/End: Complemental strand, 2157919 - 2157834
Alignment:
Q |
94 |
ccaactctagagtgaagtttgttaggcgacaagccaatgaggttgctcatattcttgtaggagaagccacattactagctagtccc |
179 |
Q |
|
|
|||||||| | ||| |||||||||||||||||||||| ||| ||||| || ||||| | |||||||||| ||||||||||||||| |
|
|
T |
2157919 |
ccaactctcgggtggagtttgttaggcgacaagccaacgagattgcttatgctcttgcaagagaagccacgttactagctagtccc |
2157834 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #7
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 135 - 227
Target Start/End: Original strand, 23622542 - 23622634
Alignment:
Q |
135 |
gttgctcatattcttgtaggagaagccacattactagctagtcccaccatttattttcatatgcccgaatgtattgaatctcttattattaat |
227 |
Q |
|
|
||||||||| | |||| |||||||||||| || |||||||||| | |||||||| | || ||||| |||||||||||||||||||||||| |
|
|
T |
23622542 |
gttgctcatgtgcttgcaggagaagccacgtttctagctagtctcgttgtttattttaacatacccgattgtattgaatctcttattattaat |
23622634 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #8
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 94 - 196
Target Start/End: Original strand, 26683475 - 26683577
Alignment:
Q |
94 |
ccaactctagagtgaagtttgttaggcgacaagccaatgaggttgctcatattcttgtaggagaagccacattactagctagtcccaccatttattttca |
193 |
Q |
|
|
|||||||| | ||| |||||||| |||||||| |||| ||| ||||||| ||||| ||| || |||||||| || ||||||||| | ||||||||||| |
|
|
T |
26683475 |
ccaactctcgggtggagtttgttccgcgacaagttaatgtggtggctcatactcttgcaggggaggccacatttcttgctagtcccgctatttattttca |
26683574 |
T |
|
Q |
194 |
tat |
196 |
Q |
|
|
||| |
|
|
T |
26683575 |
tat |
26683577 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #9
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 95 - 176
Target Start/End: Original strand, 40299901 - 40299982
Alignment:
Q |
95 |
caactctagagtgaagtttgttaggcgacaagccaatgaggttgctcatattcttgtaggagaagccacattactagctagt |
176 |
Q |
|
|
||||||| | ||| ||||||||||||||||||| || | ||||||||||| ||| |||| ||| |||||||| || |||||| |
|
|
T |
40299901 |
caactctcgggtggagtttgttaggcgacaagcaaacgtggttgctcatactctcgtagaagaggccacatttctcgctagt |
40299982 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #10
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 109 - 227
Target Start/End: Complemental strand, 29955591 - 29955473
Alignment:
Q |
109 |
agtttgttaggcgacaagccaatgaggttgctcatattcttgtaggagaagccacattactagctagtcccaccatttattttcatatgcccgaatgtat |
208 |
Q |
|
|
|||||| |||||||||| | ||| |||||||||| | |||||| |||||| ||| || ||| |||||| || |||||||| | || || || ||||| |
|
|
T |
29955591 |
agtttgctaggcgacaaacaaatatggttgctcatgtgcttgtaagagaagtcacgtttctaactagtctcattgtttattttaacatacctgattgtat |
29955492 |
T |
|
Q |
209 |
tgaatctcttattattaat |
227 |
Q |
|
|
||||||| ||||||||||| |
|
|
T |
29955491 |
tgaatcttttattattaat |
29955473 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8 (Bit Score: 122; Significance: 1e-62; HSPs: 14)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 122; E-Value: 1e-62
Query Start/End: Original strand, 1 - 223
Target Start/End: Complemental strand, 26932095 - 26931874
Alignment:
Q |
1 |
tacttgtgatgccttccatactactcagagacgactactttgaatttaggtgcattatttcttcctgtcgtactctagttagttannnnnnnaccaactc |
100 |
Q |
|
|
||||||||||||||||||||||||| || |||||| || ||||||| |||||||||||||||||||||||||||||||||||| |||||||| |
|
|
T |
26932095 |
tacttgtgatgccttccatactactt-gatacgactgctctgaatttgggtgcattatttcttcctgtcgtactctagttagttctttctttaccaactc |
26931997 |
T |
|
Q |
101 |
tagagtgaagtttgttaggcgacaagccaatgaggttgctcatattcttgtaggagaagccacattactagctagtcccaccatttattttcatatgccc |
200 |
Q |
|
|
||| || |||||||||||| |||||||||||| |||| |||| |||||| |||||||||||||||||||||||||| | |||||||||||||||| || |
|
|
T |
26931996 |
tagggtagagtttgttaggcaacaagccaatgaagttgttcatgttcttgcaggagaagccacattactagctagtctcgccatttattttcatatatcc |
26931897 |
T |
|
Q |
201 |
gaatgtattgaatctcttattat |
223 |
Q |
|
|
||||||||||||||||||||||| |
|
|
T |
26931896 |
gaatgtattgaatctcttattat |
26931874 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #2
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 93 - 227
Target Start/End: Complemental strand, 2246864 - 2246730
Alignment:
Q |
93 |
accaactctagagtgaagtttgttaggcgacaagccaatgaggttgctcatattcttgtaggagaagccacattactagctagtcccaccatttattttc |
192 |
Q |
|
|
||||||||||| ||| |||||||||||| |||||| || |||||||||||| |||||| |||||||| || ||||||||||||| ||||||||| |
|
|
T |
2246864 |
accaactctagggtggagtttgttaggcaacaagcaaacgaggttgctcatgttcttgcaggagaagtcatgttactagctagtcatgttgtttattttc |
2246765 |
T |
|
Q |
193 |
atatgcccgaatgtattgaatctcttattattaat |
227 |
Q |
|
|
| || || || ||||||||| |||||||||||||| |
|
|
T |
2246764 |
acatacctgattgtattgaacctcttattattaat |
2246730 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #3
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 96 - 227
Target Start/End: Complemental strand, 17837294 - 17837163
Alignment:
Q |
96 |
aactctagagtgaagtttgttaggcgacaagccaatgaggttgctcatattcttgtaggagaagccacattactagctagtcccaccatttattttcata |
195 |
Q |
|
|
|||||||| ||| |||||||||||||||||||||| | ||||||||||| ||||| | |||||||||| | |||||||||| || ||||||| ||| |
|
|
T |
17837294 |
aactctagggtggagtttgttaggcgacaagccaacgcggttgctcatactcttgcaagagaagccacgtctttagctagtcctgccgtttatttcgata |
17837195 |
T |
|
Q |
196 |
tgcccgaatgtattgaatctcttattattaat |
227 |
Q |
|
|
| ||||| | |||||||||| | ||||||||| |
|
|
T |
17837194 |
tacccgattatattgaatctttaattattaat |
17837163 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #4
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 96 - 223
Target Start/End: Original strand, 14505721 - 14505848
Alignment:
Q |
96 |
aactctagagtgaagtttgttaggcgacaagccaatgaggttgctcatattcttgtaggagaagccacattactagctagtcccaccatttattttcata |
195 |
Q |
|
|
|||||||| ||| |||||||||||||||||||||| | |||||||||| ||||| | | || ||||| | ||||||||||| || |||||||| ||| |
|
|
T |
14505721 |
aactctagggtggagtttgttaggcgacaagccaacgtggttgctcatgctcttgcaagggaggccacgtctttagctagtcccgccgtttattttaata |
14505820 |
T |
|
Q |
196 |
tgcccgaatgtattgaatctcttattat |
223 |
Q |
|
|
| ||| | ||||||||| |||||||||| |
|
|
T |
14505821 |
tacccaattgtattgaaactcttattat |
14505848 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #5
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 96 - 227
Target Start/End: Complemental strand, 34723993 - 34723862
Alignment:
Q |
96 |
aactctagagtgaagtttgttaggcgacaagccaatgaggttgctcatattcttgtaggagaagccacattactagctagtcccaccatttattttcata |
195 |
Q |
|
|
||||| || ||| |||||||||||||||||||||| | ||||||||||| ||||| | |||||||||| | ||||||||| | || |||||| | ||| |
|
|
T |
34723993 |
aactccagggtggagtttgttaggcgacaagccaacgtggttgctcatactcttgcaagagaagccacgtctttagctagtctcgccgtttattatgata |
34723894 |
T |
|
Q |
196 |
tgcccgaatgtattgaatctcttattattaat |
227 |
Q |
|
|
| ||| | |||||||||||| |||| |||||| |
|
|
T |
34723893 |
tacccaattgtattgaatctattatgattaat |
34723862 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #6
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 96 - 227
Target Start/End: Complemental strand, 37590177 - 37590046
Alignment:
Q |
96 |
aactctagagtgaagtttgttaggcgacaagccaatgaggttgctcatattcttgtaggagaagccacattactagctagtcccaccatttattttcata |
195 |
Q |
|
|
|||||||| ||| |||||||||||||||||||||| | |||||||||| ||||| | | || ||||| | |||||||| || || |||||||| ||| |
|
|
T |
37590177 |
aactctagggtggagtttgttaggcgacaagccaacgtggttgctcatgctcttgcaagggaggccacgtctttagctagttccgccgtttattttaata |
37590078 |
T |
|
Q |
196 |
tgcccgaatgtattgaatctcttattattaat |
227 |
Q |
|
|
| ||| | ||||||||| |||||||||||||| |
|
|
T |
37590077 |
tacccaattgtattgaaactcttattattaat |
37590046 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #7
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 96 - 223
Target Start/End: Complemental strand, 15990550 - 15990423
Alignment:
Q |
96 |
aactctagagtgaagtttgttaggcgacaagccaatgaggttgctcatattcttgtaggagaagccacattactagctagtcccaccatttattttcata |
195 |
Q |
|
|
|||||||| ||| |||||||||||||||||||| | | |||||||||| ||||| | | || ||||| | ||||||||||| || |||||||| ||| |
|
|
T |
15990550 |
aactctagggtggagtttgttaggcgacaagcctacgtggttgctcatgctcttgcaagggaggccacgtctttagctagtcccgccgtttattttaata |
15990451 |
T |
|
Q |
196 |
tgcccgaatgtattgaatctcttattat |
223 |
Q |
|
|
| ||| | ||||||||| |||||||||| |
|
|
T |
15990450 |
tacccaattgtattgaaactcttattat |
15990423 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #8
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 109 - 227
Target Start/End: Original strand, 953683 - 953801
Alignment:
Q |
109 |
agtttgttaggcgacaagccaatgaggttgctcatattcttgtaggagaagccacattactagctagtcccaccatttattttcatatgcccgaatgtat |
208 |
Q |
|
|
|||||||| ||||||||| || ||| |||||||| |||||| |||||||| ||| ||||||||||||||| |||||||||| || | | ||||| |
|
|
T |
953683 |
agtttgtttagcgacaagcaaacgagtttgctcatgttcttgcaggagaagtcacgttactagctagtcccgttgtttattttcacatatctaattgtat |
953782 |
T |
|
Q |
209 |
tgaatctcttattattaat |
227 |
Q |
|
|
|||| |||||||||||||| |
|
|
T |
953783 |
tgaacctcttattattaat |
953801 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #9
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 96 - 220
Target Start/End: Complemental strand, 14657846 - 14657722
Alignment:
Q |
96 |
aactctagagtgaagtttgttaggcgacaagccaatgaggttgctcatattcttgtaggagaagccacattactagctagtcccaccatttattttcata |
195 |
Q |
|
|
|||||||| ||| |||||||||||||||||||||| |||| ||||| ||||| | |||||||||| |||||||| |||| || |||||||| ||| |
|
|
T |
14657846 |
aactctagggtggagtttgttaggcgacaagccaacaaggtatctcatgctcttgcaagagaagccacgttactagccagtcacattgtttattttgata |
14657747 |
T |
|
Q |
196 |
tgcccgaatgtattgaatctcttat |
220 |
Q |
|
|
| || | ||||||||| ||||||| |
|
|
T |
14657746 |
tacctaattgtattgaaactcttat |
14657722 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #10
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 109 - 196
Target Start/End: Original strand, 10601107 - 10601194
Alignment:
Q |
109 |
agtttgttaggcgacaagccaatgaggttgctcatattcttgtaggagaagccacattactagctagtcccaccatttattttcatat |
196 |
Q |
|
|
|||||||| |||||||||| |||| ||| ||||| | ||| | ||| ||||||||||| || ||||||||||| |||||| ||||||| |
|
|
T |
10601107 |
agtttgttcggcgacaagctaatgtggtggctcacactctcgcaggggaagccacatttctcgctagtcccactatttatcttcatat |
10601194 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #11
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 93 - 212
Target Start/End: Complemental strand, 20526315 - 20526196
Alignment:
Q |
93 |
accaactctagagtgaagtttgttaggcgacaagccaatgaggttgctcatattcttgtaggagaagccacattactagctagtcccaccatttattttc |
192 |
Q |
|
|
||||||||| | ||| |||||||| ||||||||| |||| ||| ||||||| ||| | ||| || |||||||| || |||||| ||| |||||||||| |
|
|
T |
20526315 |
accaactctcgggtggagtttgttcggcgacaagttaatgtggtggctcatactctcgcaggggaggccacatttctcactagtcgcactatttattttc |
20526216 |
T |
|
Q |
193 |
atatgcccgaatgtattgaa |
212 |
Q |
|
|
|||| ||| | ||||||||| |
|
|
T |
20526215 |
atatacccaattgtattgaa |
20526196 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #12
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 121 - 211
Target Start/End: Original strand, 23558677 - 23558767
Alignment:
Q |
121 |
gacaagccaatgaggttgctcatattcttgtaggagaagccacattactagctagtcccaccatttattttcatatgcccgaatgtattga |
211 |
Q |
|
|
||||||| |||| ||||| ||||| ||||| |||||| ||||| |||||||||||||| ||||||||||| || ||| |||||||||| |
|
|
T |
23558677 |
gacaagcaaatgtggttgttcatactcttgcaggagagataacatttctagctagtcccactatttattttcacataccccaatgtattga |
23558767 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #13
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 96 - 143
Target Start/End: Original strand, 1186545 - 1186592
Alignment:
Q |
96 |
aactctagagtgaagtttgttaggcgacaagccaatgaggttgctcat |
143 |
Q |
|
|
|||||||| ||| |||||||||||||||||||||| | |||||||||| |
|
|
T |
1186545 |
aactctagggtggagtttgttaggcgacaagccaacgtggttgctcat |
1186592 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #14
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 94 - 179
Target Start/End: Original strand, 35285032 - 35285117
Alignment:
Q |
94 |
ccaactctagagtgaagtttgttaggcgacaagccaatgaggttgctcatattcttgtaggagaagccacattactagctagtccc |
179 |
Q |
|
|
|||||||||| ||| ||||||||||||||||||| || | ||| ||||||| ||||| | |||| ||||| | ||||||||||| |
|
|
T |
35285032 |
ccaactctagggtggagtttgttaggcgacaagctaacgcggtggctcatactcttgcacgagaggccacgtccttagctagtccc |
35285117 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1 (Bit Score: 106; Significance: 4e-53; HSPs: 20)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 1 - 227
Target Start/End: Complemental strand, 5185505 - 5185281
Alignment:
Q |
1 |
tacttgtgatgccttccatactactcagagacgactactttgaatttaggtgcattatttcttcctgtcgtactctagttagttannnnnnnaccaactc |
100 |
Q |
|
|
|||||||||||||||||||||||||| |||||||||||| ||||||| | |||||||||| ||| |||||||||||||||| || |||||||| |
|
|
T |
5185505 |
tacttgtgatgccttccatactactc-gagacgactactctgaatttggatgcattattttttcatgtcgtactctagttaatt-tttctttaccaactc |
5185408 |
T |
|
Q |
101 |
tagagtgaagtttgttaggcgacaagccaatgaggttgctcatattcttgtaggagaagccacattactagctagtcccaccatttattttcatatgccc |
200 |
Q |
|
|
||| ||| ||||||||| ||||||| |||||||||||| |||| |||||| | |||||| |||||||| |||||||||| ||||||||||| |||| ||| |
|
|
T |
5185407 |
tagggtggagtttgttaagcgacaaaccaatgaggttgttcatgttcttgcaagagaagtcacattaccagctagtcccgccatttatttttatataccc |
5185308 |
T |
|
Q |
201 |
gaatgtattgaatctcttattattaat |
227 |
Q |
|
|
|||| |||||||| ||||||||||||| |
|
|
T |
5185307 |
gaatatattgaatatcttattattaat |
5185281 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #2
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 93 - 227
Target Start/End: Original strand, 24065210 - 24065344
Alignment:
Q |
93 |
accaactctagagtgaagtttgttaggcgacaagccaatgaggttgctcatattcttgtaggagaagccacattactagctagtcccaccatttattttc |
192 |
Q |
|
|
||||||| ||| ||| ||||||||||||||||||| || |||||||||||| |||||| |||||||||||| ||||||||||||||| ||||||||| |
|
|
T |
24065210 |
accaactttagggtggagtttgttaggcgacaagcaaacgaggttgctcatgttcttgcaggagaagccacgttactagctagtcccgttgtttattttc |
24065309 |
T |
|
Q |
193 |
atatgcccgaatgtattgaatctcttattattaat |
227 |
Q |
|
|
| || ||||| ||||||||| ||||||||||||| |
|
|
T |
24065310 |
acatacccgattgtattgaacttcttattattaat |
24065344 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #3
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 94 - 191
Target Start/End: Original strand, 41117187 - 41117284
Alignment:
Q |
94 |
ccaactctagagtgaagtttgttaggcgacaagccaatgaggttgctcatattcttgtaggagaagccacattactagctagtcccaccatttatttt |
191 |
Q |
|
|
|||||||| | ||| ||||||||||||||||||||||||||||||||||| ||||| | |||||||||| |||||||||||||||||| |||||||| |
|
|
T |
41117187 |
ccaactctcgggtggagtttgttaggcgacaagccaatgaggttgctcatgctcttgcaagagaagccacgttactagctagtcccaccgtttatttt |
41117284 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #4
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 93 - 227
Target Start/End: Original strand, 29115408 - 29115542
Alignment:
Q |
93 |
accaactctagagtgaagtttgttaggcgacaagccaatgaggttgctcatattcttgtaggagaagccacattactagctagtcccaccatttattttc |
192 |
Q |
|
|
||||||||||| ||| |||||||||| |||||||| || |||||||||||| ||| |||| |||| | ||| ||||||||||||| ||||||||| |
|
|
T |
29115408 |
accaactctagggtgtagtttgttagacgacaagcaaacgaggttgctcatgttcctgtaagagaggtcacgttactagctagtcatgttgtttattttc |
29115507 |
T |
|
Q |
193 |
atatgcccgaatgtattgaatctcttattattaat |
227 |
Q |
|
|
|||| ||||| ||||| ||| |||||||||||||| |
|
|
T |
29115508 |
atatacccgattgtatggaacctcttattattaat |
29115542 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #5
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 96 - 223
Target Start/End: Complemental strand, 40490154 - 40490027
Alignment:
Q |
96 |
aactctagagtgaagtttgttaggcgacaagccaatgaggttgctcatattcttgtaggagaagccacattactagctagtcccaccatttattttcata |
195 |
Q |
|
|
|||||||| ||| ||||||||||||||||| |||||||||| |||||| ||||| | |||||| | | ||||||| ||||||| | |||||||| ||| |
|
|
T |
40490154 |
aactctagggtggagtttgttaggcgacaaaccaatgaggtcgctcatgctcttgcaagagaagtcgcgttactagttagtcccgctgtttattttgata |
40490055 |
T |
|
Q |
196 |
tgcccgaatgtattgaatctcttattat |
223 |
Q |
|
|
| || |||| ||||||| |||||||||| |
|
|
T |
40490054 |
taccggaatatattgaaactcttattat |
40490027 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #6
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 93 - 179
Target Start/End: Original strand, 13288084 - 13288170
Alignment:
Q |
93 |
accaactctagagtgaagtttgttaggcgacaagccaatgaggttgctcatattcttgtaggagaagccacattactagctagtccc |
179 |
Q |
|
|
||||||||||| ||| |||||| |||||||||| | |||| |||||||||| | |||| ||||||||||| ||| |||||||||||| |
|
|
T |
13288084 |
accaactctagggtggagtttgctaggcgacaaacaaatgcggttgctcatgtgcttgcaggagaagccatatttctagctagtccc |
13288170 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #7
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 96 - 173
Target Start/End: Complemental strand, 24427635 - 24427558
Alignment:
Q |
96 |
aactctagagtgaagtttgttaggcgacaagccaatgaggttgctcatattcttgtaggagaagccacattactagct |
173 |
Q |
|
|
|||||||| || ||||| |||||||||||||||||||||| ||||||| ||||| | ||||| ||||||| |||||| |
|
|
T |
24427635 |
aactctagggtcgagtttattaggcgacaagccaatgaggtcgctcatactcttgcaagagaaaccacattcctagct |
24427558 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #8
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 96 - 223
Target Start/End: Original strand, 30033582 - 30033709
Alignment:
Q |
96 |
aactctagagtgaagtttgttaggcgacaagccaatgaggttgctcatattcttgtaggagaagccacattactagctagtcccaccatttattttcata |
195 |
Q |
|
|
|||||||| ||| ||||||||||||||||||||| | |||||||||| ||||| | | || ||||| | ||||||||||| || |||||||| ||| |
|
|
T |
30033582 |
aactctagggtggagtttgttaggcgacaagccagcgtggttgctcatgctcttgcaagggaggccacgtctttagctagtcccgccgtttattttaata |
30033681 |
T |
|
Q |
196 |
tgcccgaatgtattgaatctcttattat |
223 |
Q |
|
|
| ||| | | ||||||| |||||||||| |
|
|
T |
30033682 |
tacccaattatattgaaactcttattat |
30033709 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #9
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 145 - 227
Target Start/End: Complemental strand, 3603612 - 3603530
Alignment:
Q |
145 |
ttcttgtaggagaagccacattactagctagtcccaccatttattttcatatgcccgaatgtattgaatctcttattattaat |
227 |
Q |
|
|
|||||| |||||| ||||| |||||||||| |||| ||||||||||||| | ||| ||||||||| |||||||||||||| |
|
|
T |
3603612 |
ttcttgcaggagaggccacgttactagctactcccgttgtttattttcatatacacgattgtattgaacctcttattattaat |
3603530 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #10
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 93 - 227
Target Start/End: Original strand, 4614887 - 4615021
Alignment:
Q |
93 |
accaactctagagtgaagtttgttaggcgacaagccaatgaggttgctcatattcttgtaggagaagccacattactagctagtcccaccatttattttc |
192 |
Q |
|
|
||||||||||| ||| |||||| |||||||||| | |||| |||||||||| | |||| || ||||||||| || ||| ||||| || || ||||| |
|
|
T |
4614887 |
accaactctagggtggagtttgctaggcgacaaacaaatgtggttgctcatgtgcttgcagaagaagccacgtttctaactagttccgttgttgatttta |
4614986 |
T |
|
Q |
193 |
atatgcccgaatgtattgaatctcttattattaat |
227 |
Q |
|
|
| || |||| ||||||||||||| |||||||||| |
|
|
T |
4614987 |
acataaccgattgtattgaatctcgtattattaat |
4615021 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #11
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 96 - 214
Target Start/End: Original strand, 9361767 - 9361885
Alignment:
Q |
96 |
aactctagagtgaagtttgttaggcgacaagccaatgaggttgctcatattcttgtaggagaagccacattactagctagtcccaccatttattttcata |
195 |
Q |
|
|
|||||||| ||| |||||||||||||||||||||| | |||||||||| |||| | |||||||||| || || |||||| | | ||||||| | ||| |
|
|
T |
9361767 |
aactctagggtggagtttgttaggcgacaagccaacgcggttgctcatgcacttgcaagagaagccacgttcttaactagtctcgctatttattatgata |
9361866 |
T |
|
Q |
196 |
tgcccgaatgtattgaatc |
214 |
Q |
|
|
| || ||||||| |||||| |
|
|
T |
9361867 |
tacctgaatgtactgaatc |
9361885 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #12
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 96 - 227
Target Start/End: Original strand, 24083375 - 24083508
Alignment:
Q |
96 |
aactctagagtgaagtttgttaggcgacaagccaatgaggttgctcatattcttgtaggagaagccacattactagctagtcccaccatttat--tttca |
193 |
Q |
|
|
||||||| ||| |||||||||||||||||||||| | |||||||||| |||| | |||||||||| || ||||||||||| | |||||| | | | |
|
|
T |
24083375 |
aactctacggtggagtttgttaggcgacaagccaacgcggttgctcatgcacttgcaagagaagccacgttcttagctagtcccgctatttattatatga |
24083474 |
T |
|
Q |
194 |
tatgcccgaatgtattgaatctcttattattaat |
227 |
Q |
|
|
||| || |||||||||||||| | ||||||||| |
|
|
T |
24083475 |
tataccagaatgtattgaatccttaattattaat |
24083508 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #13
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 120 - 196
Target Start/End: Original strand, 9928977 - 9929053
Alignment:
Q |
120 |
cgacaagccaatgaggttgctcatattcttgtaggagaagccacattactagctagtcccaccatttattttcatat |
196 |
Q |
|
|
|||||| | |||||||| |||||| ||| | ||||||| |||||||| ||||||||||||| || ||||||||||| |
|
|
T |
9928977 |
cgacaaacaaatgaggtggctcatgctctagcaggagaaaccacattattagctagtcccactatatattttcatat |
9929053 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #14
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 96 - 148
Target Start/End: Original strand, 10771217 - 10771269
Alignment:
Q |
96 |
aactctagagtgaagtttgttaggcgacaagccaatgaggttgctcatattct |
148 |
Q |
|
|
|||||| | ||| |||||||||||||||||||||||| ||| ||||||||||| |
|
|
T |
10771217 |
aactctcgggtggagtttgttaggcgacaagccaatgtggtagctcatattct |
10771269 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #15
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 117 - 209
Target Start/End: Original strand, 35151231 - 35151323
Alignment:
Q |
117 |
aggcgacaagccaatgaggttgctcatattcttgtaggagaagccacattactagctagtcccaccatttattttcatatgcccgaatgtatt |
209 |
Q |
|
|
||||||||||| |||| ||| | |||| ||| | |||||||||| ||||| |||||||||||| |||||||||||||| || || |||||| |
|
|
T |
35151231 |
aggcgacaagcaaatgtggtggttcatgctctagcaggagaagccgcattatcagctagtcccactatttattttcatatccctgattgtatt |
35151323 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #16
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 93 - 196
Target Start/End: Complemental strand, 16678887 - 16678784
Alignment:
Q |
93 |
accaactctagagtgaagtttgttaggcgacaagccaatgaggttgctcatattcttgtaggagaagccacattactagctagtcccaccatttattttc |
192 |
Q |
|
|
||||||||| | ||| |||||||| |||||||| |||| ||| ||||| | ||| | ||| ||||||||||| || ||| ||||||| |||||||||| |
|
|
T |
16678887 |
accaactctcgcgtggagtttgttcggcgacaaattaatgtggtggctcacactctcgcaggggaagccacatttctcgcttgtcccactatttattttc |
16678788 |
T |
|
Q |
193 |
atat |
196 |
Q |
|
|
|||| |
|
|
T |
16678787 |
atat |
16678784 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #17
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 96 - 227
Target Start/End: Complemental strand, 21701613 - 21701482
Alignment:
Q |
96 |
aactctagagtgaagtttgttaggcgacaagccaatgaggttgctcatattcttgtaggagaagccacattactagctagtcccaccatttattttcata |
195 |
Q |
|
|
|||||||| ||| |||||||||||||| ||||||| | |||||||||| |||| | |||| ||||| | ||||||||||| || |||||| | ||| |
|
|
T |
21701613 |
aactctagggtggagtttgttaggcgataagccaacgtggttgctcatgctctttcacgagaggccacgtctttagctagtcccgccgtttattatgata |
21701514 |
T |
|
Q |
196 |
tgcccgaatgtattgaatctcttattattaat |
227 |
Q |
|
|
| | | | ||||||||| ||||||| |||||| |
|
|
T |
21701513 |
tactcaattgtattgaaactcttatgattaat |
21701482 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #18
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 157 - 212
Target Start/End: Original strand, 47726324 - 47726379
Alignment:
Q |
157 |
aagccacattactagctagtcccaccatttattttcatatgcccgaatgtattgaa |
212 |
Q |
|
|
|||||||||| || ||||||||||| |||||||||||||| ||| | ||||||||| |
|
|
T |
47726324 |
aagccacatttctcgctagtcccactatttattttcatatacccaattgtattgaa |
47726379 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #19
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 157 - 212
Target Start/End: Original strand, 47747630 - 47747685
Alignment:
Q |
157 |
aagccacattactagctagtcccaccatttattttcatatgcccgaatgtattgaa |
212 |
Q |
|
|
|||||||||| || ||||||||||| |||||||||||||| ||| | ||||||||| |
|
|
T |
47747630 |
aagccacatttctcgctagtcccactatttattttcatatacccaattgtattgaa |
47747685 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #20
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 95 - 227
Target Start/End: Complemental strand, 34696244 - 34696112
Alignment:
Q |
95 |
caactctagagtgaagtttgttaggcgacaagccaatgaggttgctcatattcttgtaggagaagccacattactagctagtcccaccatttattttcat |
194 |
Q |
|
|
||||||| | ||| |||||| |||| |||||| |||| ||||||||||| ||| | |||||| |||| || |||||||||| | ||||||||||| |
|
|
T |
34696244 |
caactctcgggtggagtttgctaggagacaagaaaatgtggttgctcatactctcgaaggagagaccacgtttctagctagtctcgttgtttattttcat |
34696145 |
T |
|
Q |
195 |
atgcccgaatgtattgaatctcttattattaat |
227 |
Q |
|
|
|| ||| | ||||||||| || | ||||||||| |
|
|
T |
34696144 |
ataccccattgtattgaaactttgattattaat |
34696112 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7 (Bit Score: 91; Significance: 3e-44; HSPs: 15)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 28 - 227
Target Start/End: Original strand, 48770044 - 48770243
Alignment:
Q |
28 |
gagacgactactttgaatttaggtgcattatttcttcctgtcgtactctagttagttannnnnnnaccaactctagagtgaagtttgttaggcgacaagc |
127 |
Q |
|
|
|||||||||| | ||| ||| | || ||||||||||| ||||| ||||||||||| | ||||||||||| ||| ||||| || ||||| |||| |
|
|
T |
48770044 |
gagacgactattctgagtttggatgtattatttcttcatgtcgcactctagttagctctttttttaccaactctagggtggagtttattcggcgagaagc |
48770143 |
T |
|
Q |
128 |
caatgaggttgctcatattcttgtaggagaagccacattactagctagtcccaccatttattttcatatgcccgaatgtattgaatctcttattattaat |
227 |
Q |
|
|
||||||||||||||| |||| | ||||||||||||||||| ||||||||||||||||||||||||||| ||||||||||||||| |||||||||||||| |
|
|
T |
48770144 |
taatgaggttgctcatgttctcgcaggagaagccacattacaagctagtcccaccatttattttcatatacccgaatgtattgaaactcttattattaat |
48770243 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #2
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 94 - 179
Target Start/End: Original strand, 15633227 - 15633312
Alignment:
Q |
94 |
ccaactctagagtgaagtttgttaggcgacaagccaatgaggttgctcatattcttgtaggagaagccacattactagctagtccc |
179 |
Q |
|
|
|||||||| | ||| |||||||||||||||||||||||||||||||||||| ||||| | |||||||||| ||||||||||||||| |
|
|
T |
15633227 |
ccaactctcgggtggagtttgttaggcgacaagccaatgaggttgctcatactcttgcaagagaagccacgttactagctagtccc |
15633312 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #3
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 96 - 214
Target Start/End: Complemental strand, 17238813 - 17238695
Alignment:
Q |
96 |
aactctagagtgaagtttgttaggcgacaagccaatgaggttgctcatattcttgtaggagaagccacattactagctagtcccaccatttattttcata |
195 |
Q |
|
|
|||||||| ||| |||||||||||||||||||||| | |||||||||| |||| | ||||||||||||| || |||||||||| ||||||| | ||| |
|
|
T |
17238813 |
aactctagggtggagtttgttaggcgacaagccaacgcggttgctcatgcacttgcaagagaagccacattcttaactagtcccactatttattatgata |
17238714 |
T |
|
Q |
196 |
tgcccgaatgtattgaatc |
214 |
Q |
|
|
| ||||||||||||||||| |
|
|
T |
17238713 |
tacccgaatgtattgaatc |
17238695 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #4
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 93 - 227
Target Start/End: Complemental strand, 33611176 - 33611042
Alignment:
Q |
93 |
accaactctagagtgaagtttgttaggcgacaagccaatgaggttgctcatattcttgtaggagaagccacattactagctagtcccaccatttattttc |
192 |
Q |
|
|
||||||||||| ||| ||||||||||||||||||| || ||||| |||| |||||| |||||| |||| ||||||||| ||||| ||||||||| |
|
|
T |
33611176 |
accaactctagggtggagtttgttaggcgacaagcaaacagggttgttcatgttcttgcaggagatgccatgttactagctggtcccgttgtttattttc |
33611077 |
T |
|
Q |
193 |
atatgcccgaatgtattgaatctcttattattaat |
227 |
Q |
|
|
|||| ||||| ||||||||| |||||||||||||| |
|
|
T |
33611076 |
atatacccgattgtattgaacctcttattattaat |
33611042 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #5
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 109 - 227
Target Start/End: Original strand, 3896478 - 3896596
Alignment:
Q |
109 |
agtttgttaggcgacaagccaatgaggttgctcatattcttgtaggagaagccacattactagctagtcccaccatttattttcatatgcccgaatgtat |
208 |
Q |
|
|
|||||||||||||||||||||| | |||||||||| |||| | |||| ||||| | ||||||||||| || |||||||| |||| ||||| ||||| |
|
|
T |
3896478 |
agtttgttaggcgacaagccaacgtggttgctcatgcacttgcaagagaggccacgtctttagctagtcccgccgtttattttgatatacccgattgtat |
3896577 |
T |
|
Q |
209 |
tgaatctcttattattaat |
227 |
Q |
|
|
|||| |||||||||||||| |
|
|
T |
3896578 |
tgaaactcttattattaat |
3896596 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #6
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 94 - 178
Target Start/End: Complemental strand, 13015105 - 13015021
Alignment:
Q |
94 |
ccaactctagagtgaagtttgttaggcgacaagccaatgaggttgctcatattcttgtaggagaagccacattactagctagtcc |
178 |
Q |
|
|
|||||||| | ||| |||||||||||||||||||||| |||||||||||| ||||| | ||||| |||| |||||||||||||| |
|
|
T |
13015105 |
ccaactctcgggtgtagtttgttaggcgacaagccaacgaggttgctcatgctcttgcaagagaatccacgttactagctagtcc |
13015021 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #7
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 96 - 227
Target Start/End: Original strand, 32480215 - 32480346
Alignment:
Q |
96 |
aactctagagtgaagtttgttaggcgacaagccaatgaggttgctcatattcttgtaggagaagccacattactagctagtcccaccatttattttcata |
195 |
Q |
|
|
|||||||| ||| |||||||||||||||||||||| | ||||||||||| ||||| | | || ||||| | ||||||||||| | |||||||| ||| |
|
|
T |
32480215 |
aactctagggtggagtttgttaggcgacaagccaacgtggttgctcatactcttgcaagggaggccacgtctttagctagtcccgcagtttattttaata |
32480314 |
T |
|
Q |
196 |
tgcccgaatgtattgaatctcttattattaat |
227 |
Q |
|
|
| | | | ||||||||| |||||||||||||| |
|
|
T |
32480315 |
tactcaattgtattgaaactcttattattaat |
32480346 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #8
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 93 - 227
Target Start/End: Complemental strand, 48100883 - 48100749
Alignment:
Q |
93 |
accaactctagagtgaagtttgttaggcgacaagccaatgaggttgctcatattcttgtaggagaagccacattactagctagtcccaccatttattttc |
192 |
Q |
|
|
||||||||||| ||| |||||| |||||||||||| |||| |||||||||| | |||| ||||||| |||| || |||| ||||||| |||||||| |
|
|
T |
48100883 |
accaactctagggtggagtttgctaggcgacaagcaaatgtggttgctcatgtgcttgcaggagaatccacgtttctagttagtcccgttgtttatttta |
48100784 |
T |
|
Q |
193 |
atatgcccgaatgtattgaatctcttattattaat |
227 |
Q |
|
|
||| | || |||||||||| ||||||||||||| |
|
|
T |
48100783 |
gtatatctgattgtattgaatatcttattattaat |
48100749 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #9
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 96 - 227
Target Start/End: Original strand, 30502506 - 30502637
Alignment:
Q |
96 |
aactctagagtgaagtttgttaggcgacaagccaatgaggttgctcatattcttgtaggagaagccacattactagctagtcccaccatttattttcata |
195 |
Q |
|
|
||||||| ||| ||||||||| ||||||| ||| | ||||||||||| ||||| | |||| ||||| | ||||||||||| | |||||||| ||| |
|
|
T |
30502506 |
aactctaaggtggagtttgttactcgacaagtcaacgcggttgctcatactcttgcaagagaggccacgtccttagctagtcccgcagtttattttgata |
30502605 |
T |
|
Q |
196 |
tgcccgaatgtattgaatctcttattattaat |
227 |
Q |
|
|
| ||||| ||||||||| |||||||||||||| |
|
|
T |
30502606 |
tacccgattgtattgaaactcttattattaat |
30502637 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #10
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 96 - 194
Target Start/End: Complemental strand, 2175144 - 2175046
Alignment:
Q |
96 |
aactctagagtgaagtttgttaggcgacaagccaatgaggttgctcatattcttgtaggagaagccacattactagctagtcccaccatttattttcat |
194 |
Q |
|
|
|||||||| ||| ||||| || | ||||||| |||||||||||||| || | |||||||| ||||||||| ||| ||||||||||||||||| |||| |
|
|
T |
2175144 |
aactctagggtggagtttattcagagacaagcagatgaggttgctcatgttttcgtaggagaggccacattagtagttagtcccaccatttattatcat |
2175046 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #11
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 109 - 215
Target Start/End: Complemental strand, 3205258 - 3205152
Alignment:
Q |
109 |
agtttgttaggcgacaagccaatgaggttgctcatattcttgtaggagaagccacattactagctagtcccaccatttattttcatatgcccgaatgtat |
208 |
Q |
|
|
||||||||||||||||| |||| | |||||||||| ||||| | |||||||||| | ||||||||||| || ||||||| |||| ||||| ||||| |
|
|
T |
3205258 |
agtttgttaggcgacaacccaacgtggttgctcatgctcttgcaagagaagccacgtctttagctagtcccgccgtttatttcgatatacccgattgtat |
3205159 |
T |
|
Q |
209 |
tgaatct |
215 |
Q |
|
|
| ||||| |
|
|
T |
3205158 |
taaatct |
3205152 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #12
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 98 - 227
Target Start/End: Complemental strand, 24226345 - 24226216
Alignment:
Q |
98 |
ctctagagtgaagtttgttaggcgacaagccaatgaggttgctcatattcttgtaggagaagccacattactagctagtcccaccatttattttcatatg |
197 |
Q |
|
|
|||||| ||| |||||||||||||||||||||| | |||||||||| ||||| | |||| ||||| | ||||||||||| | |||||| | |||| |
|
|
T |
24226345 |
ctctagggtggagtttgttaggcgacaagccaacgcggttgctcatgctcttgcacgagaggccacgtctttagctagtcccgacgtttattatgatata |
24226246 |
T |
|
Q |
198 |
cccgaatgtattgaatctcttattattaat |
227 |
Q |
|
|
||| |||||| || |||||||||||||| |
|
|
T |
24226245 |
cccacttgtatttaaactcttattattaat |
24226216 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #13
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 183 - 227
Target Start/End: Original strand, 44435539 - 44435583
Alignment:
Q |
183 |
atttattttcatatgcccgaatgtattgaatctcttattattaat |
227 |
Q |
|
|
||||||||| |||| ||||||||||||||||||||||||||||| |
|
|
T |
44435539 |
atttattttaatatatccgaatgtattgaatctcttattattaat |
44435583 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #14
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 116 - 191
Target Start/End: Original strand, 39970026 - 39970101
Alignment:
Q |
116 |
taggcgacaagccaatgaggttgctcatattcttgtaggagaagccacattactagctagtcccaccatttatttt |
191 |
Q |
|
|
|||||||||||| |||||||||||||| | |||| || | ||||||||||| || |||| ||||| ||||||||| |
|
|
T |
39970026 |
taggcgacaagcaaatgaggttgctcacacacttgcagaataagccacattattaactagacccactatttatttt |
39970101 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #15
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 96 - 212
Target Start/End: Original strand, 41601433 - 41601549
Alignment:
Q |
96 |
aactctagagtgaagtttgttaggcgacaagccaatgaggttgctcatattcttgtaggagaagccacattactagctagtcccaccatttattttcata |
195 |
Q |
|
|
|||||||| ||| ||||||||||||| |||||||| | ||||| |||| ||||| | |||| ||||||| ||||||||||| | |||||| | ||| |
|
|
T |
41601433 |
aactctagggtggagtttgttaggcggcaagccaaagcggttgttcatgctcttgcacgagaggccacatctttagctagtcccgctgtttattatgata |
41601532 |
T |
|
Q |
196 |
tgcccgaatgtattgaa |
212 |
Q |
|
|
| ||| | ||||||||| |
|
|
T |
41601533 |
tacccaattgtattgaa |
41601549 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2 (Bit Score: 83; Significance: 2e-39; HSPs: 12)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 93 - 227
Target Start/End: Original strand, 11553324 - 11553458
Alignment:
Q |
93 |
accaactctagagtgaagtttgttaggcgacaagccaatgaggttgctcatattcttgtaggagaagccacattactagctagtcccaccatttattttc |
192 |
Q |
|
|
||||||||||| ||| ||||| | |||||||||| |||||||||| |||| |||| | ||||||||||||||||||||||||||||||||||||||||| |
|
|
T |
11553324 |
accaactctagggtggagtttactcggcgacaagctaatgaggttgatcatgttctcgcaggagaagccacattactagctagtcccaccatttattttc |
11553423 |
T |
|
Q |
193 |
atatgcccgaatgtattgaatctcttattattaat |
227 |
Q |
|
|
|||| ||||||| ||||||| |||||||||||||| |
|
|
T |
11553424 |
atatacccgaatatattgaaactcttattattaat |
11553458 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #2
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 93 - 227
Target Start/End: Complemental strand, 11818586 - 11818452
Alignment:
Q |
93 |
accaactctagagtgaagtttgttaggcgacaagccaatgaggttgctcatattcttgtaggagaagccacattactagctagtcccaccatttattttc |
192 |
Q |
|
|
||||||||||| ||| ||||||||||||||||||| || |||||||||||| |||||| |||||||||||| ||||||||||||||| |||||||||| |
|
|
T |
11818586 |
accaactctagggtggagtttgttaggcgacaagcaaacgaggttgctcatgttcttgcaggagaagccacgttactagctagtcccgttatttattttc |
11818487 |
T |
|
Q |
193 |
atatgcccgaatgtattgaatctcttattattaat |
227 |
Q |
|
|
| || ||| | | ||||||| |||||||||||||| |
|
|
T |
11818486 |
agatacccaattatattgaacctcttattattaat |
11818452 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #3
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 93 - 227
Target Start/End: Original strand, 14231020 - 14231154
Alignment:
Q |
93 |
accaactctagagtgaagtttgttaggcgacaagccaatgaggttgctcatattcttgtaggagaagccacattactagctagtcccaccatttattttc |
192 |
Q |
|
|
||||||||||||||| ||||||||||||||||||| |||| ||| ||||| | ||||| | | ||||||||||| || ||||||||| || ||||||| |
|
|
T |
14231020 |
accaactctagagtggagtttgttaggcgacaagctaatgtggtggctcacactcttgcaagggaagccacatttctcgctagtcccgttatctattttc |
14231119 |
T |
|
Q |
193 |
atatgcccgaatgtattgaatctcttattattaat |
227 |
Q |
|
|
|||| ||| | ||||||||| || | ||||||||| |
|
|
T |
14231120 |
atatacccaattgtattgaaactttgattattaat |
14231154 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #4
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 95 - 179
Target Start/End: Original strand, 36641358 - 36641442
Alignment:
Q |
95 |
caactctagagtgaagtttgttaggcgacaagccaatgaggttgctcatattcttgtaggagaagccacattactagctagtccc |
179 |
Q |
|
|
||||||| | ||| |||||||||||||||||||||| |||||||||||| ||||| | ||||||||||||||||||||||||| |
|
|
T |
36641358 |
caactctcgggtggagtttgttaggcgacaagccaacgaggttgctcatgctcttgcaaaagaagccacattactagctagtccc |
36641442 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #5
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 96 - 214
Target Start/End: Original strand, 44886295 - 44886413
Alignment:
Q |
96 |
aactctagagtgaagtttgttaggcgacaagccaatgaggttgctcatattcttgtaggagaagccacattactagctagtcccaccatttattttcata |
195 |
Q |
|
|
|||||||| ||| |||||||||||||||||| ||| | |||||||||| |||| | |||||||||| || |||||| |||||| ||||||| | ||| |
|
|
T |
44886295 |
aactctagggtggagtttgttaggcgacaagtcaacgcggttgctcatgcacttgcaagagaagccacgttcttagctaatcccactatttattatgata |
44886394 |
T |
|
Q |
196 |
tgcccgaatgtattgaatc |
214 |
Q |
|
|
| ||||||||||||||||| |
|
|
T |
44886395 |
tacccgaatgtattgaatc |
44886413 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #6
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 96 - 223
Target Start/End: Original strand, 16206539 - 16206666
Alignment:
Q |
96 |
aactctagagtgaagtttgttaggcgacaagccaatgaggttgctcatattcttgtaggagaagccacattactagctagtcccaccatttattttcata |
195 |
Q |
|
|
|||||||| ||| |||||||||||||||||||||| | |||||||||| ||||| | | || ||||| | ||||||||||| || |||||||| ||| |
|
|
T |
16206539 |
aactctagggtggagtttgttaggcgacaagccaacgtggttgctcatgctcttgcaagggaggccacgtctttagctagtcccgccgtttattttaata |
16206638 |
T |
|
Q |
196 |
tgcccgaatgtattgaatctcttattat |
223 |
Q |
|
|
| ||| | ||||||||| |||||||||| |
|
|
T |
16206639 |
tacccaattgtattgaaactcttattat |
16206666 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #7
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 96 - 180
Target Start/End: Complemental strand, 27268028 - 27267944
Alignment:
Q |
96 |
aactctagagtgaagtttgttaggcgacaagccaatgaggttgctcatattcttgtaggagaagccacattactagctagtccca |
180 |
Q |
|
|
|||||||| ||| ||||||||||| ||||||| || ||||||||||||| |||| | |||||||||| ||||||| |||||||| |
|
|
T |
27268028 |
aactctagggtggagtttgttaggtgacaagctaacgaggttgctcatacacttgcaagagaagccacgttactagttagtccca |
27267944 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #8
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 93 - 196
Target Start/End: Complemental strand, 10973691 - 10973588
Alignment:
Q |
93 |
accaactctagagtgaagtttgttaggcgacaagccaatgaggttgctcatattcttgtaggagaagccacattactagctagtcccaccatttattttc |
192 |
Q |
|
|
||||||||| | ||| |||||||| |||||||||| |||| ||| ||||| | ||| ||||| ||||||||||| || | | ||||||| |||||||||| |
|
|
T |
10973691 |
accaactctcgggtggagtttgttcggcgacaagctaatgtggtggctcacactctcgtaggggaagccacatttctcgtttgtcccacaatttattttc |
10973592 |
T |
|
Q |
193 |
atat |
196 |
Q |
|
|
|||| |
|
|
T |
10973591 |
atat |
10973588 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #9
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 96 - 163
Target Start/End: Original strand, 11502322 - 11502389
Alignment:
Q |
96 |
aactctagagtgaagtttgttaggcgacaagccaatgaggttgctcatattcttgtaggagaagccac |
163 |
Q |
|
|
|||||||| ||| |||||||||||||||||||||| | ||||||||||| ||||| | |||||||||| |
|
|
T |
11502322 |
aactctagggtggagtttgttaggcgacaagccaacgtggttgctcatactcttgcaagagaagccac |
11502389 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #10
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 93 - 227
Target Start/End: Original strand, 33650874 - 33651008
Alignment:
Q |
93 |
accaactctagagtgaagtttgttaggcgacaagccaatgaggttgctcatattcttgtaggagaagccacattactagctagtcccaccatttattttc |
192 |
Q |
|
|
|||||||||||||||||||||| |||| |||||| |||| ||||| |||| | |||| || ||||| ||| || |||||||||||| |||||||| |
|
|
T |
33650874 |
accaactctagagtgaagtttgccaggcaacaagcaaatgcggttgttcatgtgcttgcagaagaagtcacgtttctagctagtcccgttgtttatttta |
33650973 |
T |
|
Q |
193 |
atatgcccgaatgtattgaatctcttattattaat |
227 |
Q |
|
|
| || ||| | ||||||||| ||||||||||||| |
|
|
T |
33650974 |
acatacccaatcgtattgaatatcttattattaat |
33651008 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #11
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 95 - 196
Target Start/End: Original strand, 17826750 - 17826851
Alignment:
Q |
95 |
caactctagagtgaagtttgttaggcgacaagccaatgaggttgctcatattcttgtaggagaagccacattactagctagtcccaccatttattttcat |
194 |
Q |
|
|
|||||||| ||| |||||| ||||||||||| |||| ||| ||||| | | ||||||||||||||| ||| || ||||||||| | ||||||| |||| |
|
|
T |
17826750 |
caactctacggtggagtttgctaggcgacaagataatgtggtggctcacactgttgtaggagaagccatattcctcgctagtcccgctatttattatcat |
17826849 |
T |
|
Q |
195 |
at |
196 |
Q |
|
|
|| |
|
|
T |
17826850 |
at |
17826851 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #12
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 94 - 227
Target Start/End: Original strand, 23379867 - 23379999
Alignment:
Q |
94 |
ccaactctagagtgaagtttgttaggcgacaagccaatgaggttgctcatattcttgtaggagaagccacattactagctagtcccaccatttattttca |
193 |
Q |
|
|
|||||||||| ||| ||||| ||||| |||| ||||| ||||||| | || ||| | | |||||| |||||||||||||||| || | |||||||| | |
|
|
T |
23379867 |
ccaactctagggtggagtttattaggtgaca-gccaacgaggttgtttatgctctcgcaagagaagtcacattactagctagttccgctgtttattttaa |
23379965 |
T |
|
Q |
194 |
tatgcccgaatgtattgaatctcttattattaat |
227 |
Q |
|
|
|| ||| | ||||||||| || ||||||||||| |
|
|
T |
23379966 |
aatacccaattgtattgaaactattattattaat |
23379999 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6 (Bit Score: 75; Significance: 1e-34; HSPs: 9)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 93 - 227
Target Start/End: Original strand, 16416598 - 16416732
Alignment:
Q |
93 |
accaactctagagtgaagtttgttaggcgacaagccaatgaggttgctcatattcttgtaggagaagccacattactagctagtcccaccatttattttc |
192 |
Q |
|
|
||||||||||| ||| |||||||||||||||||| ||||||||||||| |||||||| |||||| | ||||||||||||||||| || |||||||||| |
|
|
T |
16416598 |
accaactctagggtgtagtttgttaggcgacaagtaaatgaggttgctcgtattcttgcaggagatgtcacattactagctagtctcattatttattttc |
16416697 |
T |
|
Q |
193 |
atatgcccgaatgtattgaatctcttattattaat |
227 |
Q |
|
|
|||| ||| | ||||||||| |||||||||||||| |
|
|
T |
16416698 |
atatacccaattgtattgaacctcttattattaat |
16416732 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #2
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 4 - 227
Target Start/End: Complemental strand, 23509081 - 23508859
Alignment:
Q |
4 |
ttgtgatgccttccatactactcagagacgactactt-tgaatttaggtgcattatttcttcctgtcgtactctagttagttannnnnnnaccaactcta |
102 |
Q |
|
|
|||||||||||||||| ||| || |||| ||| |||| |||||||||||||||||| || || ||||| ||||| |||||| ||||| |||| |
|
|
T |
23509081 |
ttgtgatgccttccatgctaatc-gagatgac-acttctgaatttaggtgcattatctcatcatgtcggtctctatttagttctttctttaccaattcta |
23508984 |
T |
|
Q |
103 |
gagtgaagtttgttaggcgacaagccaatgaggttgctcatattcttgtaggagaagccacattactagctagtcccaccatttattttcatatgcccga |
202 |
Q |
|
|
| ||| ||||||||||||||||||| |||| |||||||||| |||||| ||||||||||||||||| |||||||||| |||| ||||| || || || |
|
|
T |
23508983 |
gggtggagtttgttaggcgacaagcaaatggggttgctcatgttcttgcaggagaagccacattacgagctagtcccgttgtttaatttcacatacctga |
23508884 |
T |
|
Q |
203 |
atgtattgaatctcttattattaat |
227 |
Q |
|
|
||||||||| |||||||||||||| |
|
|
T |
23508883 |
ttgtattgaacctcttattattaat |
23508859 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #3
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 96 - 223
Target Start/End: Complemental strand, 34355884 - 34355757
Alignment:
Q |
96 |
aactctagagtgaagtttgttaggcgacaagccaatgaggttgctcatattcttgtaggagaagccacattactagctagtcccaccatttattttcata |
195 |
Q |
|
|
|||||||| ||||||||||||| |||| ||||||| |||||||||||| ||||| | ||||| ||| ||||||||||||||| | |||||||| ||| |
|
|
T |
34355884 |
aactctagggtgaagtttgttatgcgaaaagccaacgaggttgctcatgctcttgcaagagaaaccatgttactagctagtcccgctgtttattttgata |
34355785 |
T |
|
Q |
196 |
tgcccgaatgtattgaatctcttattat |
223 |
Q |
|
|
| ||| | ||||||||| |||||||||| |
|
|
T |
34355784 |
tacccaattgtattgaaactcttattat |
34355757 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #4
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 93 - 227
Target Start/End: Complemental strand, 30141081 - 30140947
Alignment:
Q |
93 |
accaactctagagtgaagtttgttaggcgacaagccaatgaggttgctcatattcttgtaggagaagccacattactagctagtcccaccatttattttc |
192 |
Q |
|
|
||||||||||| ||| ||||||||||||||||||| |||| ||| | ||| | ||||| | ||||||||||| || ||||||||| | || ||||||| |
|
|
T |
30141081 |
accaactctagggtggagtttgttaggcgacaagctaatgtggtggatcacactcttgcaaaggaagccacatttctcgctagtcccgctatctattttc |
30140982 |
T |
|
Q |
193 |
atatgcccgaatgtattgaatctcttattattaat |
227 |
Q |
|
|
|||| ||| | ||||||||| || | ||||||||| |
|
|
T |
30140981 |
atatacccaattgtattgaaactttgattattaat |
30140947 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #5
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 96 - 223
Target Start/End: Complemental strand, 1493382 - 1493255
Alignment:
Q |
96 |
aactctagagtgaagtttgttaggcgacaagccaatgaggttgctcatattcttgtaggagaagccacattactagctagtcccaccatttattttcata |
195 |
Q |
|
|
|||||||| ||| |||||||||||||||||||||| | |||||||||| ||||| | |||| ||||| | ||||||||||| || ||||||| ||| |
|
|
T |
1493382 |
aactctagggtggagtttgttaggcgacaagccaacgcggttgctcatgctcttgcaagagaggccacgtctttagctagtcccgccgtttatttcgata |
1493283 |
T |
|
Q |
196 |
tgcccgaatgtattgaatctcttattat |
223 |
Q |
|
|
| ||| | | ||||||| || ||||||| |
|
|
T |
1493282 |
tacccaattatattgaaactattattat |
1493255 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #6
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 96 - 227
Target Start/End: Original strand, 16890210 - 16890341
Alignment:
Q |
96 |
aactctagagtgaagtttgttaggcgacaagccaatgaggttgctcatattcttgtaggagaagccacattactagctagtcccaccatttattttcata |
195 |
Q |
|
|
|||||||| ||| ||||||||||||||||| ||| | |||||||||| ||||| | |||||||||||| || ||||| || || |||||||| ||| |
|
|
T |
16890210 |
aactctagggtggagtttgttaggcgacaaagcaacgcggttgctcatgctcttgcaagagaagccacatctttaactagtaccgccgtttattttgata |
16890309 |
T |
|
Q |
196 |
tgcccgaatgtattgaatctcttattattaat |
227 |
Q |
|
|
| ||| | ||| ||||| ||||| |||||||| |
|
|
T |
16890310 |
tacccaattgttttgaaactcttgttattaat |
16890341 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #7
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 96 - 143
Target Start/End: Original strand, 9959227 - 9959274
Alignment:
Q |
96 |
aactctagagtgaagtttgttaggcgacaagccaatgaggttgctcat |
143 |
Q |
|
|
|||||||| ||| |||||||||||||||||||||| | |||||||||| |
|
|
T |
9959227 |
aactctagggtggagtttgttaggcgacaagccaacgcggttgctcat |
9959274 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #8
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 184 - 227
Target Start/End: Original strand, 13768241 - 13768284
Alignment:
Q |
184 |
tttattttcatatgcccgaatgtattgaatctcttattattaat |
227 |
Q |
|
|
|||||||| |||| ||||| |||||||||||||||||||||||| |
|
|
T |
13768241 |
tttatttttatatacccgattgtattgaatctcttattattaat |
13768284 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #9
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 96 - 213
Target Start/End: Original strand, 13825472 - 13825589
Alignment:
Q |
96 |
aactctagagtgaagtttgttaggcgacaagccaatgaggttgctcatattcttgtaggagaagccacattactagctagtcccaccatttattttcata |
195 |
Q |
|
|
|||| ||| ||| |||||||||||||||||||||| | |||||||||| | |||| | |||||| || || || |||| |||| ||||||| | ||| |
|
|
T |
13825472 |
aactttagtgtggagtttgttaggcgacaagccaacgcggttgctcatgtacttgcaagagaagtcatgttctaagttagttccactatttattatgata |
13825571 |
T |
|
Q |
196 |
tgcccgaatgtattgaat |
213 |
Q |
|
|
| | |||||||||||||| |
|
|
T |
13825572 |
tactcgaatgtattgaat |
13825589 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4 (Bit Score: 75; Significance: 1e-34; HSPs: 17)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 93 - 227
Target Start/End: Original strand, 13686005 - 13686139
Alignment:
Q |
93 |
accaactctagagtgaagtttgttaggcgacaagccaatgaggttgctcatattcttgtaggagaagccacattactagctagtcccaccatttattttc |
192 |
Q |
|
|
||||||||||| ||| ||||||||||||||||||| || | |||||||||| |||||| | |||||| ||| |||||||||||||||| ||||||||| |
|
|
T |
13686005 |
accaactctagggtggagtttgttaggcgacaagcaaacggggttgctcatgttcttgcaagagaagtcacgttactagctagtcccattgtttattttc |
13686104 |
T |
|
Q |
193 |
atatgcccgaatgtattgaatctcttattattaat |
227 |
Q |
|
|
|||| ||||| |||||||||||||||||||||||| |
|
|
T |
13686105 |
atatacccgattgtattgaatctcttattattaat |
13686139 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #2
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 93 - 227
Target Start/End: Complemental strand, 54027845 - 54027711
Alignment:
Q |
93 |
accaactctagagtgaagtttgttaggcgacaagccaatgaggttgctcatattcttgtaggagaagccacattactagctagtcccaccatttattttc |
192 |
Q |
|
|
||||||||||| ||| ||||| ||||||||||||| |||| ||| ||||| | ||||||||| ||||||||||| || |||| |||| | |||||||||| |
|
|
T |
54027845 |
accaactctagggtggagttttttaggcgacaagctaatgtggtggctcacactcttgtaggggaagccacatttctcgctactcccgctatttattttc |
54027746 |
T |
|
Q |
193 |
atatgcccgaatgtattgaatctcttattattaat |
227 |
Q |
|
|
|||| ||| | | ||||||| || | ||||||||| |
|
|
T |
54027745 |
atatacccaattatattgaaactttgattattaat |
54027711 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #3
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 152 - 227
Target Start/End: Original strand, 4462628 - 4462703
Alignment:
Q |
152 |
aggagaagccacattactagctagtcccaccatttattttcatatgcccgaatgtattgaatctcttattattaat |
227 |
Q |
|
|
||||||||||||||||||| |||||||||| |||||||||||||| | |||||||||||| || ||||||||||| |
|
|
T |
4462628 |
aggagaagccacattactaactagtcccacaatttattttcatatatctgaatgtattgaaacttttattattaat |
4462703 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #4
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 94 - 227
Target Start/End: Complemental strand, 16582480 - 16582347
Alignment:
Q |
94 |
ccaactctagagtgaagtttgttaggcgacaagccaatgaggttgctcatattcttgtaggagaagccacattactagctagtcccaccatttattttca |
193 |
Q |
|
|
|||||| ||| ||| ||||||| ||||||||||||| |||| ||||||| ||||| | |||||| ||| |||||||||||||||||| |||||||| | |
|
|
T |
16582480 |
ccaactttagggtggagtttgtcgggcgacaagccaacgaggctgctcatgctcttgcaagagaagtcacgttactagctagtcccaccgtttattttga |
16582381 |
T |
|
Q |
194 |
tatgcccgaatgtattgaatctcttattattaat |
227 |
Q |
|
|
|| ||| ||||||||| || ||||||||||| |
|
|
T |
16582380 |
aatacccagttgtattgaaactattattattaat |
16582347 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #5
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 93 - 226
Target Start/End: Complemental strand, 37061192 - 37061059
Alignment:
Q |
93 |
accaactctagagtgaagtttgttaggcgacaagccaatgaggttgctcatattcttgtaggagaagccacattactagctagtcccaccatttattttc |
192 |
Q |
|
|
||||||||||| ||| |||||| |||| ||||| | |||| |||||||||| | |||| | ||||||||| || |||||||||||| |||||||| |
|
|
T |
37061192 |
accaactctagggtggagtttgctaggtgacaaacaaatgtggttgctcatgtgcttgcaagagaagccatgtttctagctagtcccgttgtttatttta |
37061093 |
T |
|
Q |
193 |
atatgcccgaatgtattgaatctcttattattaa |
226 |
Q |
|
|
| || ||||| ||||||||||||||||||||||| |
|
|
T |
37061092 |
acatacccgattgtattgaatctcttattattaa |
37061059 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #6
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 96 - 223
Target Start/End: Complemental strand, 20527919 - 20527792
Alignment:
Q |
96 |
aactctagagtgaagtttgttaggcgacaagccaatgaggttgctcatattcttgtaggagaagccacattactagctagtcccaccatttattttcata |
195 |
Q |
|
|
|||||||| ||| ||||||||||||| ||||| || | |||||||||| ||||| | |||| ||| ||||| ||||||||| ||||||||| | ||| |
|
|
T |
20527919 |
aactctagggtggagtttgttaggcggcaagctaacggggttgctcatgctcttgcaagagaggccttgttactcgctagtcccgccatttattatgata |
20527820 |
T |
|
Q |
196 |
tgcccgaatgtattgaatctcttattat |
223 |
Q |
|
|
| ||||| ||||||||| |||||||||| |
|
|
T |
20527819 |
tacccgattgtattgaaactcttattat |
20527792 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #7
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 96 - 223
Target Start/End: Original strand, 55227612 - 55227739
Alignment:
Q |
96 |
aactctagagtgaagtttgttaggcgacaagccaatgaggttgctcatattcttgtaggagaagccacattactagctagtcccaccatttattttcata |
195 |
Q |
|
|
|||||||| ||| ||||||||||||||||| |||| | |||||||||| ||||| | | || ||||||| ||||||||||| || |||||||| ||| |
|
|
T |
55227612 |
aactctagggtggagtttgttaggcgacaaaccaacgtggttgctcatgctcttgcaagggaggccacatctttagctagtcccgccgtttattttaata |
55227711 |
T |
|
Q |
196 |
tgcccgaatgtattgaatctcttattat |
223 |
Q |
|
|
| ||| | ||||||||| |||||||||| |
|
|
T |
55227712 |
tacccaattgtattgaaactcttattat |
55227739 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #8
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 96 - 223
Target Start/End: Original strand, 30859363 - 30859490
Alignment:
Q |
96 |
aactctagagtgaagtttgttaggcgacaagccaatgaggttgctcatattcttgtaggagaagccacattactagctagtcccaccatttattttcata |
195 |
Q |
|
|
|||||||| ||| |||||||||||||||||||||| | |||||||||| ||||| | | || ||||| | || |||||||| || |||||||| ||| |
|
|
T |
30859363 |
aactctagggtggagtttgttaggcgacaagccaacgtggttgctcatgctcttgcaagggaggccacgtctttaactagtcccgccgtttattttaata |
30859462 |
T |
|
Q |
196 |
tgcccgaatgtattgaatctcttattat |
223 |
Q |
|
|
| ||| | ||||||||| |||||||||| |
|
|
T |
30859463 |
tacccaattgtattgaaactcttattat |
30859490 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #9
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 93 - 227
Target Start/End: Original strand, 12355221 - 12355355
Alignment:
Q |
93 |
accaactctagagtgaagtttgttaggcgacaagccaatgaggttgctcatattcttgtaggagaagccacattactagctagtcccaccatttattttc |
192 |
Q |
|
|
||||||||||| ||| |||||||||||||||||| |||| ||| ||||| | |||| | ||| ||||||| || ||||||||||| || ||||||| |
|
|
T |
12355221 |
accaactctagggtggagtttgttaggcgacaaggtaatgtggtggctcacactcttccaaaggaaaccacatttctcgctagtcccactatctattttc |
12355320 |
T |
|
Q |
193 |
atatgcccgaatgtattgaatctcttattattaat |
227 |
Q |
|
|
|||| ||| | ||||||||| || | ||||||||| |
|
|
T |
12355321 |
atatacccaattgtattgaaactttgattattaat |
12355355 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #10
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 93 - 227
Target Start/End: Complemental strand, 27087590 - 27087456
Alignment:
Q |
93 |
accaactctagagtgaagtttgttaggcgacaagccaatgaggttgctcatattcttgtaggagaagccacattactagctagtcccaccatttattttc |
192 |
Q |
|
|
||||||||||| ||| ||||||||||||||||||| |||| ||| | ||| | ||||| | ||||||||||| || ||||||||| | || ||||||| |
|
|
T |
27087590 |
accaactctagggtggagtttgttaggcgacaagctaatgtggtgggtcacactcttgcaaaggaagccacatttctcgctagtcccgctatctattttc |
27087491 |
T |
|
Q |
193 |
atatgcccgaatgtattgaatctcttattattaat |
227 |
Q |
|
|
|||| | | | ||||||||| || | ||||||||| |
|
|
T |
27087490 |
atatactcaattgtattgaaactttgattattaat |
27087456 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #11
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 96 - 171
Target Start/End: Complemental strand, 16431495 - 16431420
Alignment:
Q |
96 |
aactctagagtgaagtttgttaggcgacaagccaatgaggttgctcatattcttgtaggagaagccacattactag |
171 |
Q |
|
|
|||||||| ||| ||||||||||||||||| |||| ||||||| |||| ||||| | |||||||||| ||||||| |
|
|
T |
16431495 |
aactctagggtggagtttgttaggcgacaaaccaacgaggttgttcatgctcttgcaagagaagccacgttactag |
16431420 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #12
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 93 - 196
Target Start/End: Complemental strand, 27066683 - 27066580
Alignment:
Q |
93 |
accaactctagagtgaagtttgttaggcgacaagccaatgaggttgctcatattcttgtaggagaagccacattactagctagtcccaccatttattttc |
192 |
Q |
|
|
||||||||||| ||| ||||||||||||||||||| |||| ||| | ||| | ||||| | ||||||||||| || ||||||||| | || ||||||| |
|
|
T |
27066683 |
accaactctagggtggagtttgttaggcgacaagctaatgtggtgggtcacactcttgcaaaggaagccacatttctcgctagtcccgctatctattttc |
27066584 |
T |
|
Q |
193 |
atat |
196 |
Q |
|
|
|||| |
|
|
T |
27066583 |
atat |
27066580 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #13
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 93 - 196
Target Start/End: Complemental strand, 27066877 - 27066774
Alignment:
Q |
93 |
accaactctagagtgaagtttgttaggcgacaagccaatgaggttgctcatattcttgtaggagaagccacattactagctagtcccaccatttattttc |
192 |
Q |
|
|
||||||||||| ||| ||||||||||||||||||| |||| ||| | ||| | ||||| | ||||||||||| || ||||||||| | || ||||||| |
|
|
T |
27066877 |
accaactctagggtggagtttgttaggcgacaagctaatgtggtgggtcacactcttgcaaaggaagccacatttctcgctagtcccgctatctattttc |
27066778 |
T |
|
Q |
193 |
atat |
196 |
Q |
|
|
|||| |
|
|
T |
27066777 |
atat |
27066774 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #14
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 93 - 227
Target Start/End: Complemental strand, 27066489 - 27066355
Alignment:
Q |
93 |
accaactctagagtgaagtttgttaggcgacaagccaatgaggttgctcatattcttgtaggagaagccacattactagctagtcccaccatttattttc |
192 |
Q |
|
|
||||||||||| ||| |||||||| |||||||||| |||| ||| | ||| | ||||| | ||||||||||| || ||||||||| | || ||||||| |
|
|
T |
27066489 |
accaactctagggtggagtttgttgggcgacaagctaatgtggtgggtcacactcttgcaaaggaagccacatttctcgctagtcccgctatctattttc |
27066390 |
T |
|
Q |
193 |
atatgcccgaatgtattgaatctcttattattaat |
227 |
Q |
|
|
|||| | | | ||||||||| || | ||||||||| |
|
|
T |
27066389 |
atatactcaattgtattgaaactttgattattaat |
27066355 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #15
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 112 - 167
Target Start/End: Original strand, 35765943 - 35765998
Alignment:
Q |
112 |
ttgttaggcgacaagccaatgaggttgctcatattcttgtaggagaagccacatta |
167 |
Q |
|
|
|||| ||||||||| ||||||||||||||||| | || | |||||||||||||||| |
|
|
T |
35765943 |
ttgtgaggcgacaatccaatgaggttgctcatgtgctcgcaggagaagccacatta |
35765998 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #16
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 94 - 179
Target Start/End: Original strand, 34301807 - 34301892
Alignment:
Q |
94 |
ccaactctagagtgaagtttgttaggcgacaagccaatgaggttgctcatattcttgtaggagaagccacattactagctagtccc |
179 |
Q |
|
|
|||||||| | ||| |||| |||||||||||| | |||| ||| ||||||| ||||| | ||| ||||||||| ||||||||||| |
|
|
T |
34301807 |
ccaactctcgggtggagttcgttaggcgacaaacaaatgcggtagctcataatcttgcaaaagaggccacattaatagctagtccc |
34301892 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #17
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 96 - 176
Target Start/End: Original strand, 28860789 - 28860869
Alignment:
Q |
96 |
aactctagagtgaagtttgttaggcgacaagccaatgaggttgctcatattcttgtaggagaagccacattactagctagt |
176 |
Q |
|
|
|||||| | ||| |||||||||||||||||||||||| ||| ||||| | ||| | |||| ||||||||| |||||||| |
|
|
T |
28860789 |
aactctcgggtggagtttgttaggcgacaagccaatgtggtagctcacactctcgctagagaggccacattattagctagt |
28860869 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3 (Bit Score: 55; Significance: 1e-22; HSPs: 17)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 93 - 227
Target Start/End: Original strand, 49499407 - 49499541
Alignment:
Q |
93 |
accaactctagagtgaagtttgttaggcgacaagccaatgaggttgctcatattcttgtaggagaagccacattactagctagtcccaccatttattttc |
192 |
Q |
|
|
||||||||||| ||| |||||| |||||||||||| |||| || ||||||| |||||| | |||||||||| || |||||||||| | ||||||||| |
|
|
T |
49499407 |
accaactctagggtggagtttgctaggcgacaagcaaatgtggctgctcatgttcttgcaagagaagccacgtttctagctagtctcgttatttatttta |
49499506 |
T |
|
Q |
193 |
atatgcccgaatgtattgaatctcttattattaat |
227 |
Q |
|
|
| || |||| |||||||||||||||||||||||| |
|
|
T |
49499507 |
acatatccgattgtattgaatctcttattattaat |
49499541 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #2
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 96 - 227
Target Start/End: Complemental strand, 19603059 - 19602928
Alignment:
Q |
96 |
aactctagagtgaagtttgttaggcgacaagccaatgaggttgctcatattcttgtaggagaagccacattactagctagtcccaccatttattttcata |
195 |
Q |
|
|
|||||||| ||| ||||||||||| |||||| ||| | ||||||||||| ||||| | ||||||| || || |||||||||||| ||||||||| ||| |
|
|
T |
19603059 |
aactctagggtggagtttgttaggtgacaaggcaacgcggttgctcatactcttgcaagagaagcgacgtttttagctagtcccagcatttatttcgata |
19602960 |
T |
|
Q |
196 |
tgcccgaatgtattgaatctcttattattaat |
227 |
Q |
|
|
| |||| |||||| ||||||||||||||||| |
|
|
T |
19602959 |
tatccgattgtatttaatctcttattattaat |
19602928 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #3
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 93 - 224
Target Start/End: Original strand, 18357104 - 18357236
Alignment:
Q |
93 |
accaactctagagtgaagtttgttaggcgacaagccaatgagg-ttgctcatattcttgtaggagaagccacattactagctagtcccaccatttatttt |
191 |
Q |
|
|
||||||||||| ||| ||||||||||| || ||||||| || |||||||| ||||| |||||||||||| |||||||||| | || |||||||| |
|
|
T |
18357104 |
accaactctagggtggagtttgttaggtgataagccaaacgggattgctcatgctcttgcaggagaagccacgttactagctaattccgttgtttatttt |
18357203 |
T |
|
Q |
192 |
catatgcccgaatgtattgaatctcttattatt |
224 |
Q |
|
|
|||| ||||||| ||||||||||||||||||| |
|
|
T |
18357204 |
gatatacccgaatatattgaatctcttattatt |
18357236 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #4
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 135 - 227
Target Start/End: Original strand, 36144765 - 36144857
Alignment:
Q |
135 |
gttgctcatattcttgtaggagaagccacattactagctagtcccaccatttattttcatatgcccgaatgtattgaatctcttattattaat |
227 |
Q |
|
|
||||||||| |||||| | |||| |||| |||||| |||||||||| |||||||||||||| ||||| ||||||||| ||||| |||||||| |
|
|
T |
36144765 |
gttgctcatgttcttgcacgagaggccatgttactaactagtcccactatttattttcatatacccgattgtattgaacctcttgttattaat |
36144857 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #5
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 96 - 223
Target Start/End: Complemental strand, 6006175 - 6006048
Alignment:
Q |
96 |
aactctagagtgaagtttgttaggcgacaagccaatgaggttgctcatattcttgtaggagaagccacattactagctagtcccaccatttattttcata |
195 |
Q |
|
|
|||||||| ||| |||||||||||||||||||||| | |||| ||||| ||||| | | |||||||| | ||||||||||| || |||||||| ||| |
|
|
T |
6006175 |
aactctagggtggagtttgttaggcgacaagccaacgtggtttctcatgctcttgcaagggaagccacgtctttagctagtcccgccgtttattttaata |
6006076 |
T |
|
Q |
196 |
tgcccgaatgtattgaatctcttattat |
223 |
Q |
|
|
| ||| | ||||||||| |||||||||| |
|
|
T |
6006075 |
tacccaattgtattgaaactcttattat |
6006048 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #6
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 109 - 223
Target Start/End: Complemental strand, 29373079 - 29372965
Alignment:
Q |
109 |
agtttgttaggcgacaagccaatgaggttgctcatattcttgtaggagaagccacattactagctagtcccaccatttattttcatatgcccgaatgtat |
208 |
Q |
|
|
||||||||||||||||| |||| |||||||| ||| |||| | |||||| ||| |||||||||||||| |||||||| || | ||||||||||| |
|
|
T |
29373079 |
agtttgttaggcgacaaaccaacgaggttgcccatgctctttcaagagaagtcacgttactagctagtccggttgtttattttaatttacccgaatgtat |
29372980 |
T |
|
Q |
209 |
tgaatctcttattat |
223 |
Q |
|
|
|||| |||||||||| |
|
|
T |
29372979 |
tgaaactcttattat |
29372965 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #7
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 94 - 179
Target Start/End: Complemental strand, 16739572 - 16739487
Alignment:
Q |
94 |
ccaactctagagtgaagtttgttaggcgacaagccaatgaggttgctcatattcttgtaggagaagccacattactagctagtccc |
179 |
Q |
|
|
|||||||| | ||| ||||||||||||||||| |||| ||| ||||| || ||||| | |||||||||| ||||||||||||||| |
|
|
T |
16739572 |
ccaactctcgggtggagtttgttaggcgacaaaccaacgagattgctaatgctcttgcaagagaagccacgttactagctagtccc |
16739487 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #8
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 96 - 215
Target Start/End: Complemental strand, 31661113 - 31660994
Alignment:
Q |
96 |
aactctagagtgaagtttgttaggcgacaagccaatgaggttgctcatattcttgtaggagaagccacattactagctagtcccaccatttattttcata |
195 |
Q |
|
|
|||||||| ||| |||||||||||||||||||||| | |||||||||| ||||| | |||| | ||| || || |||||||| || |||||| | ||| |
|
|
T |
31661113 |
aactctagggtggagtttgttaggcgacaagccaacgcggttgctcatgctcttgcacgagaggtcacttttttatctagtcccgccgtttattatgata |
31661014 |
T |
|
Q |
196 |
tgcccgaatgtattgaatct |
215 |
Q |
|
|
| ||| | |||||||||||| |
|
|
T |
31661013 |
tacccaattgtattgaatct |
31660994 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #9
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 96 - 215
Target Start/End: Original strand, 31935240 - 31935359
Alignment:
Q |
96 |
aactctagagtgaagtttgttaggcgacaagccaatgaggttgctcatattcttgtaggagaagccacattactagctagtcccaccatttattttcata |
195 |
Q |
|
|
|||||||| ||| |||||||||||||||||||||| | ||||||||| ||||| | |||| ||||| | ||||||||||| || |||||| | ||| |
|
|
T |
31935240 |
aactctagggtggagtttgttaggcgacaagccaacgcagttgctcatgctcttgcacgagaggccacgtctttagctagtcccgccgtttattatgata |
31935339 |
T |
|
Q |
196 |
tgcccgaatgtattgaatct |
215 |
Q |
|
|
| ||| | |||||||||||| |
|
|
T |
31935340 |
tacccaattgtattgaatct |
31935359 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #10
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 96 - 215
Target Start/End: Original strand, 31973498 - 31973617
Alignment:
Q |
96 |
aactctagagtgaagtttgttaggcgacaagccaatgaggttgctcatattcttgtaggagaagccacattactagctagtcccaccatttattttcata |
195 |
Q |
|
|
||||||| ||| |||||||||||||||||||||| | |||||||||| ||||| | |||| ||||| | ||||||||||| || |||||| | ||| |
|
|
T |
31973498 |
aactctatggtggagtttgttaggcgacaagccaacgcggttgctcatgctcttgcacgagaggccacgtctttagctagtcccgccgtttattatgata |
31973597 |
T |
|
Q |
196 |
tgcccgaatgtattgaatct |
215 |
Q |
|
|
| ||| | |||||||||||| |
|
|
T |
31973598 |
tacccaattgtattgaatct |
31973617 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #11
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 96 - 224
Target Start/End: Original strand, 18342634 - 18342763
Alignment:
Q |
96 |
aactctagagtgaagtttgttaggcgacaagcc-aatgaggttgctcatattcttgtaggagaagccacattactagctagtcccaccatttattttcat |
194 |
Q |
|
|
|||||||| |||||||||||||| ||||||||| || | | |||||||| | ||| || |||||| || |||||||||||| || |||||||| || |
|
|
T |
18342634 |
aactctagggtgaagtttgttagacgacaagccaaacgggattgctcatgctattgcagaagaagctacgttactagctagttccgttgtttattttaat |
18342733 |
T |
|
Q |
195 |
atgcccgaatgtattgaatctcttattatt |
224 |
Q |
|
|
|| | ||||||||| |||||||||||||| |
|
|
T |
18342734 |
atactcgaatgtataaaatctcttattatt |
18342763 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #12
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 96 - 223
Target Start/End: Original strand, 17790152 - 17790279
Alignment:
Q |
96 |
aactctagagtgaagtttgttaggcgacaagccaatgaggttgctcatattcttgtaggagaagccacattactagctagtcccaccatttattttcata |
195 |
Q |
|
|
|||||||| ||| |||||||||||||||||||||| | ||||||||| ||||| | | || ||||| | ||||||||| || |||||||| ||| |
|
|
T |
17790152 |
aactctagggtggagtttgttaggcgacaagccaacgtggttgctcacgctcttgcaagggaggccacgtctttagctagtctagccgtttattttaata |
17790251 |
T |
|
Q |
196 |
tgcccgaatgtattgaatctcttattat |
223 |
Q |
|
|
| ||| | ||||||||| |||||||||| |
|
|
T |
17790252 |
tacccaattgtattgaaactcttattat |
17790279 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #13
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 96 - 223
Target Start/End: Original strand, 19098594 - 19098721
Alignment:
Q |
96 |
aactctagagtgaagtttgttaggcgacaagccaatgaggttgctcatattcttgtaggagaagccacattactagctagtcccaccatttattttcata |
195 |
Q |
|
|
|||||||| ||| |||||||||||||||||||||| | ||||||||| ||||| | | || ||||| | ||||||||| || |||||||| ||| |
|
|
T |
19098594 |
aactctagggtggagtttgttaggcgacaagccaacgtggttgctcacgctcttgcaagggaggccacgtctttagctagtctagccgtttattttaata |
19098693 |
T |
|
Q |
196 |
tgcccgaatgtattgaatctcttattat |
223 |
Q |
|
|
| ||| | ||||||||| |||||||||| |
|
|
T |
19098694 |
tacccaattgtattgaaactcttattat |
19098721 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #14
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 96 - 143
Target Start/End: Original strand, 31228238 - 31228285
Alignment:
Q |
96 |
aactctagagtgaagtttgttaggcgacaagccaatgaggttgctcat |
143 |
Q |
|
|
|||||||| ||| |||||||||||||||||||||| | |||||||||| |
|
|
T |
31228238 |
aactctagggtggagtttgttaggcgacaagccaacgtggttgctcat |
31228285 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #15
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 94 - 189
Target Start/End: Original strand, 31809160 - 31809255
Alignment:
Q |
94 |
ccaactctagagtgaagtttgttaggcgacaagccaatgaggttgctcatattcttgtaggagaagccacattactagctagtcccaccatttatt |
189 |
Q |
|
|
|||||||||| ||| |||||||||||||||||||||| | ||| |||||| ||||| | |||| ||||| | ||||||||||| || |||||| |
|
|
T |
31809160 |
ccaactctagggtggagtttgttaggcgacaagccaacgcggtggctcatcctcttgcacgagaggccacgtctttagctagtcccgccgtttatt |
31809255 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #16
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 96 - 165
Target Start/End: Original strand, 53437536 - 53437605
Alignment:
Q |
96 |
aactctagagtgaagtttgttaggcgacaagccaatgaggttgctcatattcttgtaggagaagccacat |
165 |
Q |
|
|
|||||||| ||| ||||||||||| |||||| ||||| | |||||||| ||||| | |||||||||||| |
|
|
T |
53437536 |
aactctagggtggagtttgttaggagacaagtcaatgcgattgctcatgctcttgcaagagaagccacat |
53437605 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #17
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 96 - 176
Target Start/End: Complemental strand, 18765733 - 18765653
Alignment:
Q |
96 |
aactctagagtgaagtttgttaggcgacaagccaatgaggttgctcatattcttgtaggagaagccacattactagctagt |
176 |
Q |
|
|
|||||| | ||| ||||||||||||||||||||||| ||| ||||||| ||| | |||| ||||||||| |||||||| |
|
|
T |
18765733 |
aactctcgggtggagtttgttaggcgacaagccaatttggtagctcatactctcgctagagaggccacattaatagctagt |
18765653 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0643 (Bit Score: 47; Significance: 6e-18; HSPs: 1)
Name: scaffold0643
Description:
Target: scaffold0643; HSP #1
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 93 - 227
Target Start/End: Original strand, 1045 - 1179
Alignment:
Q |
93 |
accaactctagagtgaagtttgttaggcgacaagccaatgaggttgctcatattcttgtaggagaagccacattactagctagtcccaccatttattttc |
192 |
Q |
|
|
||||||||||| ||| ||||||||||||||||| | |||| ||| ||||| | |||| | | ||||||||||| || ||||||||| | |||||||||| |
|
|
T |
1045 |
accaactctagggtggagtttgttaggcgacaaactaatgtggtggctcacaatcttacaagggaagccacatttctcgctagtcccgctatttattttc |
1144 |
T |
|
Q |
193 |
atatgcccgaatgtattgaatctcttattattaat |
227 |
Q |
|
|
|||| ||| | |||||||||| | | ||||||||| |
|
|
T |
1145 |
atatacccaattgtattgaatgtttgattattaat |
1179 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0789 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0789
Description:
Target: scaffold0789; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 96 - 143
Target Start/End: Complemental strand, 4356 - 4309
Alignment:
Q |
96 |
aactctagagtgaagtttgttaggcgacaagccaatgaggttgctcat |
143 |
Q |
|
|
|||||||| ||| |||||||||||||||||||||| |||||||||||| |
|
|
T |
4356 |
aactctagggtggagtttgttaggcgacaagccaaagaggttgctcat |
4309 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0040 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0040
Description:
Target: scaffold0040; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 96 - 143
Target Start/End: Complemental strand, 62628 - 62581
Alignment:
Q |
96 |
aactctagagtgaagtttgttaggcgacaagccaatgaggttgctcat |
143 |
Q |
|
|
|||||||| ||| |||||||||||||||||||||| | |||||||||| |
|
|
T |
62628 |
aactctagggtggagtttgttaggcgacaagccaacgtggttgctcat |
62581 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0011 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0011
Description:
Target: scaffold0011; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 96 - 143
Target Start/End: Complemental strand, 191144 - 191097
Alignment:
Q |
96 |
aactctagagtgaagtttgttaggcgacaagccaatgaggttgctcat |
143 |
Q |
|
|
|||||||| ||| |||||||||||||||||||||| | |||||||||| |
|
|
T |
191144 |
aactctagggtggagtttgttaggcgacaagccaacgcggttgctcat |
191097 |
T |
|
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Target: scaffold1964 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold1964
Description:
Target: scaffold1964; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 93 - 186
Target Start/End: Original strand, 1109 - 1202
Alignment:
Q |
93 |
accaactctagagtgaagtttgttaggcgacaagccaatgaggttgctcatattcttgtaggagaagccacattactagctagtcccaccattt |
186 |
Q |
|
|
||||||||| | ||| |||||||| |||||||||| |||| ||| ||||| | ||| | ||| ||||||||||| || |||||| |||| |||| |
|
|
T |
1109 |
accaactctcgggtggagtttgttcggcgacaagctaatgtggtggctcacactctcgcaggggaagccacatttctcgctagttccactattt |
1202 |
T |
|
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