View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
Legend |
| Query |
| Query hiting target |
| Query hiting target's complemental strand |
| Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: J5_2_72 (Length: 1002)
Name: J5_2_72
Description: Pascalseqs
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
[»] J5_2_72 |
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[»] scaffold0045 (1 HSPs) |
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[»] scaffold0016 (1 HSPs) |
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Alignment Details
Target: chr7 (Bit Score: 307; Significance: 1e-172; HSPs: 20)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 307; E-Value: 1e-172
Query Start/End: Original strand, 1 - 328
Target Start/End: Original strand, 28480160 - 28480487
Alignment:
Q |
1 |
aatgatccttatgatgacaaaatgatcatgaagaagttgttccaccataatctcaaacttttgttggtcacggaaggaataaagggctgtagatactaca |
100 |
Q |
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|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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|
T |
28480160 |
aatgatccttatgatgacaaaatgatcatgaagaagttgttccaccataatctcaaacttttgttggtcacggaaggaataaagggctgtagatactaca |
28480259 |
T |
|
Q |
101 |
ccaaggtttgatccataaacaaaaactttcgtgaatttttcccccacagttctcgcgcgccctttatttttctgaactttaaaatctgaatgtgtaaaaa |
200 |
Q |
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|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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|
T |
28480260 |
ccaaggtttgatccataaacaaaaactttcgtgaatttttcccccacagttctcgcgcgccctttatttttctgaactttaaaatctgaatgtgtaaaaa |
28480359 |
T |
|
Q |
201 |
acatgcaacagaactttaaatgcnnnnnnnggaagcttgtaaattggtcatggttaatcctaaacaggtttttattgttgcacaggactttaaaggttgg |
300 |
Q |
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|
||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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|
T |
28480360 |
acatgcaacagaactttaaatgctttttttggaagcttgtaaattggtcatggttaatcctaaacaggtttttattgttgcacaggactttaaaggttgg |
28480459 |
T |
|
Q |
301 |
gtttatggttttgaggtggaagcaattg |
328 |
Q |
|
|
|||||||||||||||||||||||||||| |
|
|
T |
28480460 |
gtttatggttttgaggtggaagcaattg |
28480487 |
T |
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Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #2
Raw Score: 294; E-Value: 1e-164
Query Start/End: Original strand, 323 - 663
Target Start/End: Original strand, 28479484 - 28479823
Alignment:
Q |
323 |
caattgtagcttaaattgactataagctcaatattttaannnnnnnnnccataaagtatctaatgtcatgtaggccacaatatttcattatggttcagtt |
422 |
Q |
|
|
||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| ||||||||||||||||||||||||||||| |
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|
T |
28479484 |
caattgtagcttaaattgactataagctcaatattttaatttttttttccataaagtatctaatgtcatgcaggccacaatatttcattatggttcagtt |
28479583 |
T |
|
Q |
423 |
agcttaattaaggagccttctaggtcaactcacattgaagcaataaattatgccaaaatgtgtggtagtatactgtcttatgccccaaatttgacagtgc |
522 |
Q |
|
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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|
T |
28479584 |
agcttaattaaggagccttctaggtcaactcacattgaagcaataaattatgccaaaatgtgtggtagtatactgtcttatgccccaaatttgacagtgc |
28479683 |
T |
|
Q |
523 |
cactatggccatccaccagaggctgctagggaaggcatcatgagtatttggaactatgcagaccttattaaggtaaatgttttgaatatttttgtcatat |
622 |
Q |
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|
|||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| |
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|
T |
28479684 |
cactatggccat-caacagaggctgctagggaaggcatcatgagtatttggaactatgcagacgttattaaggtaaatgttttgaatatttttgtcatat |
28479782 |
T |
|
Q |
623 |
gtgtgttgaaatacatagtcaatcaaagtgtaaattagacc |
663 |
Q |
|
|
||||||||||||||||||||||||||||||||||||||||| |
|
|
T |
28479783 |
gtgtgttgaaatacatagtcaatcaaagtgtaaattagacc |
28479823 |
T |
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Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #3
Raw Score: 148; E-Value: 1e-77
Query Start/End: Original strand, 688 - 835
Target Start/End: Original strand, 28479850 - 28479997
Alignment:
Q |
688 |
gtgtccgggcttcgaacccagatcttgtatatattatgcattgtccttatcaactgagttgagtgggaccgtaaattagaccctctaaatatacaagtac |
787 |
Q |
|
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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|
T |
28479850 |
gtgtccgggcttcgaacccagatcttgtatatattatgcattgtccttatcaactgagttgagtgggaccgtaaattagaccctctaaatatacaagtac |
28479949 |
T |
|
Q |
788 |
aatatcataaacatttcaaattgccttcctaaaaggaccattgatgcc |
835 |
Q |
|
|
|||||||||||||||||||||||||||||||||||||||||||||||| |
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|
T |
28479950 |
aatatcataaacatttcaaattgccttcctaaaaggaccattgatgcc |
28479997 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #4
Raw Score: 112; E-Value: 4e-56
Query Start/End: Original strand, 887 - 1002
Target Start/End: Original strand, 28480049 - 28480164
Alignment:
Q |
887 |
ctaattacacttatatatttttatggatgaaaataggtattaactctatctatgcatgtatactccaaactgcaggtaagtgtggaagaaattcgaattt |
986 |
Q |
|
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| |
|
|
T |
28480049 |
ctaattacacttatatatttttatggatgaaaataggtattaactctatctatgcatatatactccaaactgcaggtaagtgtggaagaaattcgaattt |
28480148 |
T |
|
Q |
987 |
tgactgaaggtaatga |
1002 |
Q |
|
|
|||||||||||||||| |
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|
T |
28480149 |
tgactgaaggtaatga |
28480164 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #5
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 692 - 745
Target Start/End: Original strand, 22777357 - 22777410
Alignment:
Q |
692 |
ccgggcttcgaacccagatcttgtatatattatgcattgtccttatcaactgag |
745 |
Q |
|
|
||||| ||||||||| || |||| |||||||||||||||||||||||||||||| |
|
|
T |
22777357 |
ccgggattcgaaccccgaccttgcatatattatgcattgtccttatcaactgag |
22777410 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #6
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 689 - 747
Target Start/End: Complemental strand, 2916169 - 2916110
Alignment:
Q |
689 |
tgtccgggcttcgaa-cccagatcttgtatatattatgcattgtccttatcaactgagtt |
747 |
Q |
|
|
|||||||| |||||| |||||| |||| |||||||||||||||||| || |||||||||| |
|
|
T |
2916169 |
tgtccggggttcgaatcccagaccttgcatatattatgcattgtccgtaccaactgagtt |
2916110 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #7
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 704 - 747
Target Start/End: Complemental strand, 6384902 - 6384859
Alignment:
Q |
704 |
cccagatcttgtatatattatgcattgtccttatcaactgagtt |
747 |
Q |
|
|
|||||| |||| |||||||||||||||||||||| ||||||||| |
|
|
T |
6384902 |
cccagaccttgcatatattatgcattgtccttattaactgagtt |
6384859 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #8
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 702 - 745
Target Start/End: Original strand, 21050230 - 21050273
Alignment:
Q |
702 |
aacccagatcttgtatatattatgcattgtccttatcaactgag |
745 |
Q |
|
|
|||||||| |||| ||||||||||||||||||||| |||||||| |
|
|
T |
21050230 |
aacccagaccttgcatatattatgcattgtccttaccaactgag |
21050273 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #9
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 704 - 747
Target Start/End: Original strand, 32896474 - 32896517
Alignment:
Q |
704 |
cccagatcttgtatatattatgcattgtccttatcaactgagtt |
747 |
Q |
|
|
|||| ||||||||||||||||||||||||||| |||||||||| |
|
|
T |
32896474 |
cccaaatcttgtatatattatgcattgtccttcccaactgagtt |
32896517 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #10
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 688 - 745
Target Start/End: Original strand, 7872741 - 7872799
Alignment:
Q |
688 |
gtgtccgggcttcgaaccc-agatcttgtatatattatgcattgtccttatcaactgag |
745 |
Q |
|
|
|||||| || ||||||||| ||| |||| ||||||||||||||||||||| |||||||| |
|
|
T |
7872741 |
gtgtcctgggttcgaaccccagaccttgcatatattatgcattgtccttaccaactgag |
7872799 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #11
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 717 - 747
Target Start/End: Original strand, 46551869 - 46551899
Alignment:
Q |
717 |
tatattatgcattgtccttatcaactgagtt |
747 |
Q |
|
|
||||||||||||||||||||||||||||||| |
|
|
T |
46551869 |
tatattatgcattgtccttatcaactgagtt |
46551899 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #12
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 688 - 745
Target Start/End: Complemental strand, 46987154 - 46987096
Alignment:
Q |
688 |
gtgtccgggcttcgaacccag-atcttgtatatattatgcattgtccttatcaactgag |
745 |
Q |
|
|
||||||||| ||||||||| | | |||| ||||||||||||||||||||| |||||||| |
|
|
T |
46987154 |
gtgtccggggttcgaaccccggaccttgcatatattatgcattgtccttaccaactgag |
46987096 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #13
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 711 - 745
Target Start/End: Complemental strand, 48527234 - 48527200
Alignment:
Q |
711 |
cttgtatatattatgcattgtccttatcaactgag |
745 |
Q |
|
|
|||| |||||||||||||||||||||||||||||| |
|
|
T |
48527234 |
cttgcatatattatgcattgtccttatcaactgag |
48527200 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #14
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 708 - 745
Target Start/End: Complemental strand, 2391054 - 2391017
Alignment:
Q |
708 |
gatcttgtatatattatgcattgtccttatcaactgag |
745 |
Q |
|
|
|||||||||||||||||||||||| |||| |||||||| |
|
|
T |
2391054 |
gatcttgtatatattatgcattgttcttaccaactgag |
2391017 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #15
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 704 - 745
Target Start/End: Original strand, 5458081 - 5458122
Alignment:
Q |
704 |
cccagatcttgtatatattatgcattgtccttatcaactgag |
745 |
Q |
|
|
|||||| |||| |||||||||||||||| ||||||||||||| |
|
|
T |
5458081 |
cccagaccttgcatatattatgcattgttcttatcaactgag |
5458122 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #16
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 708 - 745
Target Start/End: Original strand, 7262687 - 7262724
Alignment:
Q |
708 |
gatcttgtatatattatgcattgtccttatcaactgag |
745 |
Q |
|
|
|||||||||||||||||||||||| |||||||| |||| |
|
|
T |
7262687 |
gatcttgtatatattatgcattgttcttatcaattgag |
7262724 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #17
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 716 - 745
Target Start/End: Complemental strand, 8227388 - 8227359
Alignment:
Q |
716 |
atatattatgcattgtccttatcaactgag |
745 |
Q |
|
|
|||||||||||||||||||||||||||||| |
|
|
T |
8227388 |
atatattatgcattgtccttatcaactgag |
8227359 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #18
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 688 - 747
Target Start/End: Original strand, 23815306 - 23815367
Alignment:
Q |
688 |
gtgtccgggcttcgaacccaga-tcttgtatatattat-gcattgtccttatcaactgagtt |
747 |
Q |
|
|
|||| |||| |||||||||||| ||||| ||||||||| |||||||||||| |||||||||| |
|
|
T |
23815306 |
gtgttcgggattcgaacccagaatcttgcatatattattgcattgtccttaccaactgagtt |
23815367 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #19
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 701 - 745
Target Start/End: Complemental strand, 25246826 - 25246781
Alignment:
Q |
701 |
gaacccaga-tcttgtatatattatgcattgtccttatcaactgag |
745 |
Q |
|
|
||||||||| ||||| ||||||||||||||||| |||||||||||| |
|
|
T |
25246826 |
gaacccagaatcttgcatatattatgcattgtctttatcaactgag |
25246781 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #20
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 716 - 745
Target Start/End: Original strand, 39926560 - 39926589
Alignment:
Q |
716 |
atatattatgcattgtccttatcaactgag |
745 |
Q |
|
|
|||||||||||||||||||||||||||||| |
|
|
T |
39926560 |
atatattatgcattgtccttatcaactgag |
39926589 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5 (Bit Score: 44; Significance: 0.000000000000002; HSPs: 15)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 688 - 747
Target Start/End: Complemental strand, 22499009 - 22498950
Alignment:
Q |
688 |
gtgtccgggcttcgaacccagatcttgtatatattatgcattgtccttatcaactgagtt |
747 |
Q |
|
|
||||||||| |||||||||||| |||| ||||||||||||||||||||| |||||||||| |
|
|
T |
22499009 |
gtgtccggggttcgaacccagaccttgcatatattatgcattgtccttaccaactgagtt |
22498950 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #2
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 706 - 747
Target Start/End: Complemental strand, 40446032 - 40445991
Alignment:
Q |
706 |
cagatcttgtatatattatgcattgtccttatcaactgagtt |
747 |
Q |
|
|
|||| |||| |||||||||||||||||||||||||||||||| |
|
|
T |
40446032 |
cagaccttgcatatattatgcattgtccttatcaactgagtt |
40445991 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #3
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 711 - 747
Target Start/End: Original strand, 8545006 - 8545042
Alignment:
Q |
711 |
cttgtatatattatgcattgtccttatcaactgagtt |
747 |
Q |
|
|
|||| |||||||||||||||||||||||||||||||| |
|
|
T |
8545006 |
cttgcatatattatgcattgtccttatcaactgagtt |
8545042 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #4
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 688 - 747
Target Start/End: Complemental strand, 31159497 - 31159437
Alignment:
Q |
688 |
gtgtccgggcttcgaacccaga-tcttgtatatattatgcattgtccttatcaactgagtt |
747 |
Q |
|
|
||||||||| ||||||||| || ||||| |||||||||| |||||| |||||||||||||| |
|
|
T |
31159497 |
gtgtccggggttcgaaccctgaatcttgcatatattatgtattgtctttatcaactgagtt |
31159437 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #5
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 704 - 747
Target Start/End: Complemental strand, 3389213 - 3389170
Alignment:
Q |
704 |
cccagatcttgtatatattatgcattgtccttatcaactgagtt |
747 |
Q |
|
|
||||||||||| |||||||||||||||||| || |||||||||| |
|
|
T |
3389213 |
cccagatcttgcatatattatgcattgtccataccaactgagtt |
3389170 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #6
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 716 - 747
Target Start/End: Complemental strand, 4432155 - 4432124
Alignment:
Q |
716 |
atatattatgcattgtccttatcaactgagtt |
747 |
Q |
|
|
|||||||||||||||||||||||||||||||| |
|
|
T |
4432155 |
atatattatgcattgtccttatcaactgagtt |
4432124 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #7
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 692 - 747
Target Start/End: Complemental strand, 17046397 - 17046342
Alignment:
Q |
692 |
ccgggcttcgaacccagatcttgtatatattatgcattgtccttatcaactgagtt |
747 |
Q |
|
|
||||| ||||||| | ||||||| |||||||||||||||||| || |||||||||| |
|
|
T |
17046397 |
ccgggattcgaactcggatcttgcatatattatgcattgtccataccaactgagtt |
17046342 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #8
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 716 - 747
Target Start/End: Original strand, 23118073 - 23118104
Alignment:
Q |
716 |
atatattatgcattgtccttatcaactgagtt |
747 |
Q |
|
|
|||||||||||||||||||||||||||||||| |
|
|
T |
23118073 |
atatattatgcattgtccttatcaactgagtt |
23118104 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #9
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 711 - 745
Target Start/End: Complemental strand, 13409594 - 13409560
Alignment:
Q |
711 |
cttgtatatattatgcattgtccttatcaactgag |
745 |
Q |
|
|
||||||||||||||||||||| ||||||||||||| |
|
|
T |
13409594 |
cttgtatatattatgcattgttcttatcaactgag |
13409560 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #10
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 709 - 747
Target Start/End: Complemental strand, 14124347 - 14124309
Alignment:
Q |
709 |
atcttgtatatattatgcattgtccttatcaactgagtt |
747 |
Q |
|
|
|||||||||||||||||||||||||||| ||||| |||| |
|
|
T |
14124347 |
atcttgtatatattatgcattgtccttaccaactaagtt |
14124309 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #11
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 693 - 747
Target Start/End: Complemental strand, 39914963 - 39914909
Alignment:
Q |
693 |
cgggcttcgaacccagatcttgtatatattatgcattgtccttatcaactgagtt |
747 |
Q |
|
|
|||| ||||||||| || |||| ||||||||||||||||||||| ||| |||||| |
|
|
T |
39914963 |
cggggttcgaacccggaccttgcatatattatgcattgtccttaccaattgagtt |
39914909 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #12
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 716 - 745
Target Start/End: Complemental strand, 18147757 - 18147728
Alignment:
Q |
716 |
atatattatgcattgtccttatcaactgag |
745 |
Q |
|
|
|||||||||||||||||||||||||||||| |
|
|
T |
18147757 |
atatattatgcattgtccttatcaactgag |
18147728 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #13
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 698 - 747
Target Start/End: Complemental strand, 29178504 - 29178455
Alignment:
Q |
698 |
ttcgaacccagatcttgtatatattatgcattgtccttatcaactgagtt |
747 |
Q |
|
|
||||||| |||| ||||||||| ||||||||||||| || |||||||||| |
|
|
T |
29178504 |
ttcgaacacagaccttgtatattttatgcattgtccataccaactgagtt |
29178455 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #14
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 692 - 745
Target Start/End: Complemental strand, 35413020 - 35412967
Alignment:
Q |
692 |
ccgggcttcgaacccagatcttgtatatattatgcattgtccttatcaactgag |
745 |
Q |
|
|
||||| ||||||||| || |||| |||||||||||||||||| ||| ||||||| |
|
|
T |
35413020 |
ccggggttcgaacccggaccttgcatatattatgcattgtccatattaactgag |
35412967 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #15
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 712 - 745
Target Start/End: Original strand, 37339778 - 37339811
Alignment:
Q |
712 |
ttgtatatattatgcattgtccttatcaactgag |
745 |
Q |
|
|
||||||||||||||||||||| |||||||||||| |
|
|
T |
37339778 |
ttgtatatattatgcattgtctttatcaactgag |
37339811 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2 (Bit Score: 41; Significance: 0.0000000000001; HSPs: 23)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 689 - 745
Target Start/End: Complemental strand, 39761504 - 39761448
Alignment:
Q |
689 |
tgtccgggcttcgaacccagatcttgtatatattatgcattgtccttatcaactgag |
745 |
Q |
|
|
|||||||| ||| |||||||| |||| |||||||||||||||||||||||||||||| |
|
|
T |
39761504 |
tgtccggggttcaaacccagaccttgcatatattatgcattgtccttatcaactgag |
39761448 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #2
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 553 - 598
Target Start/End: Original strand, 18945365 - 18945410
Alignment:
Q |
553 |
gaaggcatcatgagtatttggaactatgcagaccttattaaggtaa |
598 |
Q |
|
|
|||| |||||||||||||||||||||||||||| |||||||||||| |
|
|
T |
18945365 |
gaagacatcatgagtatttggaactatgcagacattattaaggtaa |
18945410 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #3
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 704 - 747
Target Start/End: Original strand, 16204827 - 16204870
Alignment:
Q |
704 |
cccagatcttgtatatattatgcattgtccttatcaactgagtt |
747 |
Q |
|
|
|||||| |||| |||||||||||||||||||||||||||||||| |
|
|
T |
16204827 |
cccagaccttgcatatattatgcattgtccttatcaactgagtt |
16204870 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #4
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 705 - 747
Target Start/End: Complemental strand, 1238212 - 1238170
Alignment:
Q |
705 |
ccagatcttgtatatattatgcattgtccttatcaactgagtt |
747 |
Q |
|
|
||||||||||||||||||||||||||||| |||||| |||||| |
|
|
T |
1238212 |
ccagatcttgtatatattatgcattgtccctatcaattgagtt |
1238170 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #5
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 688 - 745
Target Start/End: Complemental strand, 24393313 - 24393255
Alignment:
Q |
688 |
gtgtccgggcttcgaacc-cagatcttgtatatattatgcattgtccttatcaactgag |
745 |
Q |
|
|
||||||||| |||||||| |||| |||| ||||||||||||||||||||| |||||||| |
|
|
T |
24393313 |
gtgtccggggttcgaacctcagaccttgcatatattatgcattgtccttaacaactgag |
24393255 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #6
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 688 - 745
Target Start/End: Complemental strand, 28771650 - 28771592
Alignment:
Q |
688 |
gtgtccgggcttcgaacc-cagatcttgtatatattatgcattgtccttatcaactgag |
745 |
Q |
|
|
||||||||| |||||||| | ||||||| ||||||||||||||||||||| |||||||| |
|
|
T |
28771650 |
gtgtccggggttcgaaccgcggatcttgcatatattatgcattgtccttaccaactgag |
28771592 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #7
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 708 - 745
Target Start/End: Complemental strand, 7262853 - 7262816
Alignment:
Q |
708 |
gatcttgtatatattatgcattgtccttatcaactgag |
745 |
Q |
|
|
|||||||||||||||||||||||||| ||||||||||| |
|
|
T |
7262853 |
gatcttgtatatattatgcattgtccatatcaactgag |
7262816 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #8
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 704 - 745
Target Start/End: Original strand, 27934867 - 27934908
Alignment:
Q |
704 |
cccagatcttgtatatattatgcattgtccttatcaactgag |
745 |
Q |
|
|
|||||||||||||||||||||| |||||||||| |||||||| |
|
|
T |
27934867 |
cccagatcttgtatatattatgtattgtccttaccaactgag |
27934908 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #9
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 708 - 745
Target Start/End: Original strand, 39068722 - 39068759
Alignment:
Q |
708 |
gatcttgtatatattatgcattgtccttatcaactgag |
745 |
Q |
|
|
||||||| |||||||||||||||||||||||||||||| |
|
|
T |
39068722 |
gatcttgcatatattatgcattgtccttatcaactgag |
39068759 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #10
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 707 - 747
Target Start/End: Original strand, 18324907 - 18324947
Alignment:
Q |
707 |
agatcttgtatatattatgcattgtccttatcaactgagtt |
747 |
Q |
|
|
|||||||| ||||||||||||||||||||| |||||||||| |
|
|
T |
18324907 |
agatcttgcatatattatgcattgtccttaccaactgagtt |
18324947 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #11
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 707 - 747
Target Start/End: Original strand, 30929058 - 30929098
Alignment:
Q |
707 |
agatcttgtatatattatgcattgtccttatcaactgagtt |
747 |
Q |
|
|
||||||| ||||||||||||||||||| ||||||||||||| |
|
|
T |
30929058 |
agatcttatatatattatgcattgtccatatcaactgagtt |
30929098 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #12
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 711 - 747
Target Start/End: Original strand, 40967388 - 40967424
Alignment:
Q |
711 |
cttgtatatattatgcattgtccttatcaactgagtt |
747 |
Q |
|
|
|||| |||||||||||||||||||||||||||||||| |
|
|
T |
40967388 |
cttgcatatattatgcattgtccttatcaactgagtt |
40967424 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #13
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 698 - 745
Target Start/End: Original strand, 7302145 - 7302192
Alignment:
Q |
698 |
ttcgaacccagatcttgtatatattatgcattgtccttatcaactgag |
745 |
Q |
|
|
|||||||||||| |||| |||| ||||||||||||| ||||||||||| |
|
|
T |
7302145 |
ttcgaacccagaccttgcatattttatgcattgtccctatcaactgag |
7302192 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #14
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 716 - 747
Target Start/End: Complemental strand, 9982664 - 9982633
Alignment:
Q |
716 |
atatattatgcattgtccttatcaactgagtt |
747 |
Q |
|
|
|||||||||||||||||||||||||||||||| |
|
|
T |
9982664 |
atatattatgcattgtccttatcaactgagtt |
9982633 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #15
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 708 - 747
Target Start/End: Complemental strand, 22359052 - 22359013
Alignment:
Q |
708 |
gatcttgtatatattatgcattgtccttatcaactgagtt |
747 |
Q |
|
|
||||||| ||||||||||||||||||||| |||||||||| |
|
|
T |
22359052 |
gatcttgcatatattatgcattgtccttaccaactgagtt |
22359013 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #16
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 711 - 745
Target Start/End: Complemental strand, 5980271 - 5980237
Alignment:
Q |
711 |
cttgtatatattatgcattgtccttatcaactgag |
745 |
Q |
|
|
|||| |||||||||||||||||||||||||||||| |
|
|
T |
5980271 |
cttgcatatattatgcattgtccttatcaactgag |
5980237 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #17
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 711 - 745
Target Start/End: Original strand, 7413206 - 7413240
Alignment:
Q |
711 |
cttgtatatattatgcattgtccttatcaactgag |
745 |
Q |
|
|
|||||||||||||||||||||||||| |||||||| |
|
|
T |
7413206 |
cttgtatatattatgcattgtccttaccaactgag |
7413240 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #18
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 707 - 745
Target Start/End: Original strand, 9459070 - 9459108
Alignment:
Q |
707 |
agatcttgtatatattatgcattgtccttatcaactgag |
745 |
Q |
|
|
|||| ||||||||||||||||||||| |||||||||||| |
|
|
T |
9459070 |
agattttgtatatattatgcattgtctttatcaactgag |
9459108 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #19
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 692 - 745
Target Start/End: Original strand, 4589715 - 4589768
Alignment:
Q |
692 |
ccgggcttcgaacccagatcttgtatatattatgcattgtccttatcaactgag |
745 |
Q |
|
|
||||| ||||||||||||||||| ||||||||| |||||| | | ||||||||| |
|
|
T |
4589715 |
ccggggttcgaacccagatcttgcatatattatacattgttcatgtcaactgag |
4589768 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #20
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 716 - 745
Target Start/End: Original strand, 10332297 - 10332326
Alignment:
Q |
716 |
atatattatgcattgtccttatcaactgag |
745 |
Q |
|
|
|||||||||||||||||||||||||||||| |
|
|
T |
10332297 |
atatattatgcattgtccttatcaactgag |
10332326 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #21
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 704 - 745
Target Start/End: Complemental strand, 12619395 - 12619354
Alignment:
Q |
704 |
cccagatcttgtatatattatgcattgtccttatcaactgag |
745 |
Q |
|
|
||||||||||| |||||||||||||| || |||||||||||| |
|
|
T |
12619395 |
cccagatcttgcatatattatgcattatcattatcaactgag |
12619354 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #22
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 693 - 745
Target Start/End: Complemental strand, 27244720 - 27244667
Alignment:
Q |
693 |
cgggcttcgaaccc-agatcttgtatatattatgcattgtccttatcaactgag |
745 |
Q |
|
|
||||||| |||||| ||| |||| |||||||||||||||||| ||||||||||| |
|
|
T |
27244720 |
cgggctttgaaccctagaccttgcatatattatgcattgtccctatcaactgag |
27244667 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #23
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 688 - 744
Target Start/End: Complemental strand, 34903585 - 34903528
Alignment:
Q |
688 |
gtgtccgggcttcgaacc-cagatcttgtatatattatgcattgtccttatcaactga |
744 |
Q |
|
|
||||||||| |||||||| |||| |||| |||||||||||| |||||||| ||||||| |
|
|
T |
34903585 |
gtgtccggggttcgaacctcagaccttgcatatattatgcactgtccttaccaactga |
34903528 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4 (Bit Score: 40; Significance: 0.0000000000004; HSPs: 21)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 704 - 747
Target Start/End: Complemental strand, 18635581 - 18635538
Alignment:
Q |
704 |
cccagatcttgtatatattatgcattgtccttatcaactgagtt |
747 |
Q |
|
|
|||||| ||||||||||||||||||||||||||||||||||||| |
|
|
T |
18635581 |
cccagaccttgtatatattatgcattgtccttatcaactgagtt |
18635538 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #2
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 689 - 745
Target Start/End: Original strand, 24785456 - 24785513
Alignment:
Q |
689 |
tgtccgggcttcgaaccc-agatcttgtatatattatgcattgtccttatcaactgag |
745 |
Q |
|
|
|||||||| ||||||||| ||| |||||||||||||||||||||||||| |||||||| |
|
|
T |
24785456 |
tgtccggggttcgaaccccagaccttgtatatattatgcattgtccttaccaactgag |
24785513 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #3
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 689 - 745
Target Start/End: Complemental strand, 24822810 - 24822753
Alignment:
Q |
689 |
tgtccgggcttcgaaccc-agatcttgtatatattatgcattgtccttatcaactgag |
745 |
Q |
|
|
|||||||| ||||||||| ||| |||||||||||||||||||||||||| |||||||| |
|
|
T |
24822810 |
tgtccggggttcgaaccccagaccttgtatatattatgcattgtccttaccaactgag |
24822753 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #4
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 692 - 745
Target Start/End: Complemental strand, 49949397 - 49949344
Alignment:
Q |
692 |
ccgggcttcgaacccagatcttgtatatattatgcattgtccttatcaactgag |
745 |
Q |
|
|
||||| |||||||||||| |||| ||||||||||||||||||||| |||||||| |
|
|
T |
49949397 |
ccgggattcgaacccagaccttgcatatattatgcattgtccttaccaactgag |
49949344 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #5
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 689 - 731
Target Start/End: Complemental strand, 41346822 - 41346780
Alignment:
Q |
689 |
tgtccgggcttcgaacccagatcttgtatatattatgcattgt |
731 |
Q |
|
|
|||||||| ||||||||| |||||||||||||||||||||||| |
|
|
T |
41346822 |
tgtccggggttcgaaccctgatcttgtatatattatgcattgt |
41346780 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #6
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 706 - 747
Target Start/End: Complemental strand, 29910510 - 29910469
Alignment:
Q |
706 |
cagatcttgtatatattatgcattgtccttatcaactgagtt |
747 |
Q |
|
|
||||||||| ||||||||||||||||||||||||| |||||| |
|
|
T |
29910510 |
cagatcttgcatatattatgcattgtccttatcaattgagtt |
29910469 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #7
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 688 - 747
Target Start/End: Original strand, 7371541 - 7371601
Alignment:
Q |
688 |
gtgtccgggcttcgaacccag-atcttgtatatattatgcattgtccttatcaactgagtt |
747 |
Q |
|
|
||||||||| ||||||||| | | |||| |||||||||| ||||||||||||||||||||| |
|
|
T |
7371541 |
gtgtccggggttcgaaccccggaccttgcatatattatgtattgtccttatcaactgagtt |
7371601 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #8
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 689 - 745
Target Start/End: Original strand, 7922245 - 7922301
Alignment:
Q |
689 |
tgtccgggcttcgaacccagatcttgtatatattatgcattgtccttatcaactgag |
745 |
Q |
|
|
||||| || ||||||||| ||||||| ||||||||||||||||| ||| |||||||| |
|
|
T |
7922245 |
tgtccagggttcgaacccggatcttgcatatattatgcattgtctttaccaactgag |
7922301 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #9
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 705 - 745
Target Start/End: Original strand, 33900735 - 33900775
Alignment:
Q |
705 |
ccagatcttgtatatattatgcattgtccttatcaactgag |
745 |
Q |
|
|
|||||||||| ||||||||||||||||||||| |||||||| |
|
|
T |
33900735 |
ccagatcttgcatatattatgcattgtccttaccaactgag |
33900775 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #10
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 716 - 747
Target Start/End: Original strand, 39842034 - 39842065
Alignment:
Q |
716 |
atatattatgcattgtccttatcaactgagtt |
747 |
Q |
|
|
|||||||||||||||||||||||||||||||| |
|
|
T |
39842034 |
atatattatgcattgtccttatcaactgagtt |
39842065 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #11
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 716 - 747
Target Start/End: Complemental strand, 56096243 - 56096212
Alignment:
Q |
716 |
atatattatgcattgtccttatcaactgagtt |
747 |
Q |
|
|
|||||||||||||||||||||||||||||||| |
|
|
T |
56096243 |
atatattatgcattgtccttatcaactgagtt |
56096212 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #12
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 688 - 745
Target Start/End: Original strand, 11144658 - 11144716
Alignment:
Q |
688 |
gtgtccgggcttcgaaccc-agatcttgtatatattatgcattgtccttatcaactgag |
745 |
Q |
|
|
||||||||| ||| ||||| ||| |||| ||||||||||||||||| |||||||||||| |
|
|
T |
11144658 |
gtgtccggggttcaaaccccagaccttgcatatattatgcattgtctttatcaactgag |
11144716 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #13
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 711 - 745
Target Start/End: Complemental strand, 12439708 - 12439674
Alignment:
Q |
711 |
cttgtatatattatgcattgtccttatcaactgag |
745 |
Q |
|
|
|||| |||||||||||||||||||||||||||||| |
|
|
T |
12439708 |
cttgcatatattatgcattgtccttatcaactgag |
12439674 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #14
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 711 - 745
Target Start/End: Complemental strand, 36203280 - 36203246
Alignment:
Q |
711 |
cttgtatatattatgcattgtccttatcaactgag |
745 |
Q |
|
|
|||| |||||||||||||||||||||||||||||| |
|
|
T |
36203280 |
cttgcatatattatgcattgtccttatcaactgag |
36203246 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #15
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 711 - 745
Target Start/End: Original strand, 42756123 - 42756157
Alignment:
Q |
711 |
cttgtatatattatgcattgtccttatcaactgag |
745 |
Q |
|
|
|||| |||||||||||||||||||||||||||||| |
|
|
T |
42756123 |
cttgcatatattatgcattgtccttatcaactgag |
42756157 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #16
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 710 - 747
Target Start/End: Complemental strand, 20131472 - 20131435
Alignment:
Q |
710 |
tcttgtatatattatgcattgtccttatcaactgagtt |
747 |
Q |
|
|
|||||||||||||||||||||||||| |||||||||| |
|
|
T |
20131472 |
tcttgtatatattatgcattgtccttgccaactgagtt |
20131435 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #17
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 711 - 744
Target Start/End: Original strand, 29808285 - 29808318
Alignment:
Q |
711 |
cttgtatatattatgcattgtccttatcaactga |
744 |
Q |
|
|
|||| ||||||||||||||||||||||||||||| |
|
|
T |
29808285 |
cttgcatatattatgcattgtccttatcaactga |
29808318 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #18
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 716 - 745
Target Start/End: Original strand, 33413352 - 33413381
Alignment:
Q |
716 |
atatattatgcattgtccttatcaactgag |
745 |
Q |
|
|
|||||||||||||||||||||||||||||| |
|
|
T |
33413352 |
atatattatgcattgtccttatcaactgag |
33413381 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #19
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 716 - 745
Target Start/End: Original strand, 46434782 - 46434811
Alignment:
Q |
716 |
atatattatgcattgtccttatcaactgag |
745 |
Q |
|
|
|||||||||||||||||||||||||||||| |
|
|
T |
46434782 |
atatattatgcattgtccttatcaactgag |
46434811 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #20
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 704 - 745
Target Start/End: Complemental strand, 49308871 - 49308830
Alignment:
Q |
704 |
cccagatcttgtatatattatgcattgtccttatcaactgag |
745 |
Q |
|
|
|||||| |||| |||||||||||||||||||| ||||||||| |
|
|
T |
49308871 |
cccagaccttgcatatattatgcattgtccttgtcaactgag |
49308830 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #21
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 688 - 745
Target Start/End: Original strand, 50442741 - 50442798
Alignment:
Q |
688 |
gtgtccgggcttcgaacccagatcttgtatatattatgcattgtccttatcaactgag |
745 |
Q |
|
|
||||| ||| |||||||||||| |||| |||||||||||||| ||| || |||||||| |
|
|
T |
50442741 |
gtgtctgggattcgaacccagaccttgcatatattatgcattatccctaccaactgag |
50442798 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8 (Bit Score: 39; Significance: 0.000000000002; HSPs: 10)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 688 - 745
Target Start/End: Original strand, 1244698 - 1244756
Alignment:
Q |
688 |
gtgtccgggcttcgaaccc-agatcttgtatatattatgcattgtccttatcaactgag |
745 |
Q |
|
|
||||||||| ||||||||| ||| |||||||||||||||||||||||||| |||||||| |
|
|
T |
1244698 |
gtgtccggggttcgaaccccagaccttgtatatattatgcattgtccttaccaactgag |
1244756 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #2
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 688 - 745
Target Start/End: Complemental strand, 19488368 - 19488310
Alignment:
Q |
688 |
gtgtccgggcttcgaaccc-agatcttgtatatattatgcattgtccttatcaactgag |
745 |
Q |
|
|
||||||||| ||||| ||| ||| |||||||||||||||||||||||||| |||||||| |
|
|
T |
19488368 |
gtgtccgggattcgagccccagaccttgtatatattatgcattgtccttaccaactgag |
19488310 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #3
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 711 - 745
Target Start/End: Complemental strand, 5179837 - 5179803
Alignment:
Q |
711 |
cttgtatatattatgcattgtccttatcaactgag |
745 |
Q |
|
|
|||||||||||||||||||||||||| |||||||| |
|
|
T |
5179837 |
cttgtatatattatgcattgtccttaccaactgag |
5179803 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #4
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 701 - 747
Target Start/End: Complemental strand, 8837974 - 8837928
Alignment:
Q |
701 |
gaacccagatcttgtatatattatgcattgtccttatcaactgagtt |
747 |
Q |
|
|
|||||| || ||||||||||||||||||||||| ||||||| ||||| |
|
|
T |
8837974 |
gaacccggaccttgtatatattatgcattgtccctatcaaccgagtt |
8837928 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #5
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 712 - 742
Target Start/End: Original strand, 10256331 - 10256361
Alignment:
Q |
712 |
ttgtatatattatgcattgtccttatcaact |
742 |
Q |
|
|
||||||||||||||||||||||||||||||| |
|
|
T |
10256331 |
ttgtatatattatgcattgtccttatcaact |
10256361 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #6
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 711 - 745
Target Start/End: Complemental strand, 14258059 - 14258025
Alignment:
Q |
711 |
cttgtatatattatgcattgtccttatcaactgag |
745 |
Q |
|
|
||||||||||||||||||||||||| ||||||||| |
|
|
T |
14258059 |
cttgtatatattatgcattgtccttgtcaactgag |
14258025 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #7
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 712 - 746
Target Start/End: Original strand, 29851651 - 29851685
Alignment:
Q |
712 |
ttgtatatattatgcattgtccttatcaactgagt |
746 |
Q |
|
|
|||||||||||||||||||| |||||||||||||| |
|
|
T |
29851651 |
ttgtatatattatgcattgttcttatcaactgagt |
29851685 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #8
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 688 - 745
Target Start/End: Complemental strand, 30623361 - 30623303
Alignment:
Q |
688 |
gtgtccgggcttcgaaccc-agatcttgtatatattatgcattgtccttatcaactgag |
745 |
Q |
|
|
|||| |||| ||||||||| ||| |||| ||||||||||||||||||||| |||||||| |
|
|
T |
30623361 |
gtgttcggggttcgaaccccagaccttgcatatattatgcattgtccttaccaactgag |
30623303 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #9
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 706 - 747
Target Start/End: Original strand, 8442499 - 8442540
Alignment:
Q |
706 |
cagatcttgtatatattatgcattgtccttatcaactgagtt |
747 |
Q |
|
|
|||| |||| ||||||||||||||||||||| |||||||||| |
|
|
T |
8442499 |
cagaccttgcatatattatgcattgtccttaccaactgagtt |
8442540 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #10
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 708 - 745
Target Start/End: Original strand, 24696020 - 24696057
Alignment:
Q |
708 |
gatcttgtatatattatgcattgtccttatcaactgag |
745 |
Q |
|
|
||||||| |||||||||||||||||| ||||||||||| |
|
|
T |
24696020 |
gatcttgcatatattatgcattgtccatatcaactgag |
24696057 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3 (Bit Score: 38; Significance: 0.000000000006; HSPs: 21)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 688 - 745
Target Start/End: Original strand, 4216393 - 4216450
Alignment:
Q |
688 |
gtgtccgggcttcgaacccagatcttgtatatattatgcattgtccttatcaactgag |
745 |
Q |
|
|
|||||| || ||||||||| || |||| |||||||||||||||||||||||||||||| |
|
|
T |
4216393 |
gtgtccagggttcgaaccccgaccttgcatatattatgcattgtccttatcaactgag |
4216450 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #2
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 688 - 747
Target Start/End: Original strand, 38573566 - 38573626
Alignment:
Q |
688 |
gtgtccgggcttcgaaccc-agatcttgtatatattatgcattgtccttatcaactgagtt |
747 |
Q |
|
|
||||||||| |||||| || ||| ||||||||||||||||||||| ||||||||||||||| |
|
|
T |
38573566 |
gtgtccggggttcgaatcctagaccttgtatatattatgcattgttcttatcaactgagtt |
38573626 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #3
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 704 - 747
Target Start/End: Complemental strand, 17588413 - 17588370
Alignment:
Q |
704 |
cccagatcttgtatatattatgcattgtccttatcaactgagtt |
747 |
Q |
|
|
||||||||||| ||||||||||||||||||||| |||||||||| |
|
|
T |
17588413 |
cccagatcttgcatatattatgcattgtccttaccaactgagtt |
17588370 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #4
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 688 - 745
Target Start/End: Complemental strand, 45096094 - 45096036
Alignment:
Q |
688 |
gtgtccgggcttcgaacc-cagatcttgtatatattatgcattgtccttatcaactgag |
745 |
Q |
|
|
||||| ||| |||||||| |||| |||| |||||||||||||||||||||||||||||| |
|
|
T |
45096094 |
gtgtctggggttcgaaccacagaccttgcatatattatgcattgtccttatcaactgag |
45096036 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #5
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 706 - 747
Target Start/End: Complemental strand, 11574302 - 11574261
Alignment:
Q |
706 |
cagatcttgtatatattatgcattgtccttatcaactgagtt |
747 |
Q |
|
|
|||| ||||||||||||||||||| ||||||||||||||||| |
|
|
T |
11574302 |
cagaccttgtatatattatgcattatccttatcaactgagtt |
11574261 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #6
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 708 - 745
Target Start/End: Complemental strand, 13992718 - 13992681
Alignment:
Q |
708 |
gatcttgtatatattatgcattgtccttatcaactgag |
745 |
Q |
|
|
||||||||||||||||||||||||||||| |||||||| |
|
|
T |
13992718 |
gatcttgtatatattatgcattgtccttaccaactgag |
13992681 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #7
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 692 - 745
Target Start/End: Complemental strand, 46469340 - 46469287
Alignment:
Q |
692 |
ccgggcttcgaacccagatcttgtatatattatgcattgtccttatcaactgag |
745 |
Q |
|
|
||||| ||||||||| || |||| ||||||||||||||||||||| |||||||| |
|
|
T |
46469340 |
ccgggattcgaaccccgaccttgaatatattatgcattgtccttaccaactgag |
46469287 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #8
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 696 - 747
Target Start/End: Original strand, 12976603 - 12976655
Alignment:
Q |
696 |
gcttcgaa-cccagatcttgtatatattatgcattgtccttatcaactgagtt |
747 |
Q |
|
|
|||||||| |||||| |||| |||||||||||||||||| ||||||||||||| |
|
|
T |
12976603 |
gcttcgaatcccagaccttgcatatattatgcattgtccctatcaactgagtt |
12976655 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #9
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 711 - 747
Target Start/End: Original strand, 39100433 - 39100469
Alignment:
Q |
711 |
cttgtatatattatgcattgtccttatcaactgagtt |
747 |
Q |
|
|
||||||||||||||||||||| ||||||||||||||| |
|
|
T |
39100433 |
cttgtatatattatgcattgttcttatcaactgagtt |
39100469 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #10
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 711 - 747
Target Start/End: Original strand, 39869824 - 39869860
Alignment:
Q |
711 |
cttgtatatattatgcattgtccttatcaactgagtt |
747 |
Q |
|
|
|||||||||||||||||||||||||| |||||||||| |
|
|
T |
39869824 |
cttgtatatattatgcattgtccttaccaactgagtt |
39869860 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #11
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 711 - 747
Target Start/End: Original strand, 47377366 - 47377402
Alignment:
Q |
711 |
cttgtatatattatgcattgtccttatcaactgagtt |
747 |
Q |
|
|
|||||||||||||||||||||||||| |||||||||| |
|
|
T |
47377366 |
cttgtatatattatgcattgtccttaccaactgagtt |
47377402 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #12
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 716 - 747
Target Start/End: Complemental strand, 22462351 - 22462320
Alignment:
Q |
716 |
atatattatgcattgtccttatcaactgagtt |
747 |
Q |
|
|
|||||||||||||||||||||||||||||||| |
|
|
T |
22462351 |
atatattatgcattgtccttatcaactgagtt |
22462320 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #13
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 711 - 746
Target Start/End: Complemental strand, 32753872 - 32753837
Alignment:
Q |
711 |
cttgtatatattatgcattgtccttatcaactgagt |
746 |
Q |
|
|
||||||||||||||||||||||| |||||||||||| |
|
|
T |
32753872 |
cttgtatatattatgcattgtccctatcaactgagt |
32753837 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #14
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 688 - 745
Target Start/End: Original strand, 1149062 - 1149120
Alignment:
Q |
688 |
gtgtccgggcttcgaaccc-agatcttgtatatattatgcattgtccttatcaactgag |
745 |
Q |
|
|
|||||| || ||||||||| ||| |||| ||||||||||||||||||||| |||||||| |
|
|
T |
1149062 |
gtgtccagggttcgaaccctagaccttgcatatattatgcattgtccttaccaactgag |
1149120 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #15
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 692 - 745
Target Start/End: Original strand, 8113559 - 8113613
Alignment:
Q |
692 |
ccgggcttcgaacc-cagatcttgtatatattatgcattgtccttatcaactgag |
745 |
Q |
|
|
||||| |||||||| | ||||||| ||||||||||||||||||||| |||||||| |
|
|
T |
8113559 |
ccgggattcgaaccgcggatcttgcatatattatgcattgtccttaccaactgag |
8113613 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #16
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 688 - 745
Target Start/End: Complemental strand, 30200894 - 30200836
Alignment:
Q |
688 |
gtgtccgggcttcgaacc-cagatcttgtatatattatgcattgtccttatcaactgag |
745 |
Q |
|
|
||||||||| |||||||| || | |||| ||||||||||||||||||||| |||||||| |
|
|
T |
30200894 |
gtgtccggggttcgaacctcaaaccttgcatatattatgcattgtccttagcaactgag |
30200836 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #17
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 688 - 745
Target Start/End: Original strand, 35191810 - 35191868
Alignment:
Q |
688 |
gtgtccgggcttcgaaccc-agatcttgtatatattatgcattgtccttatcaactgag |
745 |
Q |
|
|
||||| ||| ||||||||| ||| |||| ||||||||||||||||||||| |||||||| |
|
|
T |
35191810 |
gtgtctggggttcgaaccccagaccttgcatatattatgcattgtccttaccaactgag |
35191868 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #18
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 711 - 745
Target Start/End: Original strand, 39822189 - 39822223
Alignment:
Q |
711 |
cttgtatatattatgcattgtccttatcaactgag |
745 |
Q |
|
|
|||||||||||||||||||||||||| |||||||| |
|
|
T |
39822189 |
cttgtatatattatgcattgtccttaccaactgag |
39822223 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #19
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 688 - 745
Target Start/End: Original strand, 54230092 - 54230150
Alignment:
Q |
688 |
gtgtccgggcttcgaaccc-agatcttgtatatattatgcattgtccttatcaactgag |
745 |
Q |
|
|
||||||||| ||||||||| | | |||| ||||||||||||||||||||| |||||||| |
|
|
T |
54230092 |
gtgtccggggttcgaaccccaaaccttgcatatattatgcattgtccttaccaactgag |
54230150 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #20
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 711 - 744
Target Start/End: Complemental strand, 10513673 - 10513640
Alignment:
Q |
711 |
cttgtatatattatgcattgtccttatcaactga |
744 |
Q |
|
|
|||||||||||||||||||||||||| ||||||| |
|
|
T |
10513673 |
cttgtatatattatgcattgtccttaccaactga |
10513640 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #21
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 708 - 745
Target Start/End: Original strand, 38869532 - 38869569
Alignment:
Q |
708 |
gatcttgtatatattatgcattgtccttatcaactgag |
745 |
Q |
|
|
|||||||||||||||||||||||| |||| |||||||| |
|
|
T |
38869532 |
gatcttgtatatattatgcattgttcttaccaactgag |
38869569 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1 (Bit Score: 37; Significance: 0.00000000002; HSPs: 14)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 698 - 742
Target Start/End: Original strand, 19533182 - 19533226
Alignment:
Q |
698 |
ttcgaacccagatcttgtatatattatgcattgtccttatcaact |
742 |
Q |
|
|
|||||||||| |||||| ||||||||||||||||||||||||||| |
|
|
T |
19533182 |
ttcgaacccaaatcttgcatatattatgcattgtccttatcaact |
19533226 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #2
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 708 - 747
Target Start/End: Original strand, 2884462 - 2884501
Alignment:
Q |
708 |
gatcttgtatatattatgcattgtccttatcaactgagtt |
747 |
Q |
|
|
|||||||||||||||||||||||||| ||||||||||||| |
|
|
T |
2884462 |
gatcttgtatatattatgcattgtccatatcaactgagtt |
2884501 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #3
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 694 - 745
Target Start/End: Complemental strand, 15764094 - 15764042
Alignment:
Q |
694 |
gggcttcgaaccca-gatcttgtatatattatgcattgtccttatcaactgag |
745 |
Q |
|
|
||||||||||||| || |||||||||||||||||||||||||| |||||||| |
|
|
T |
15764094 |
gggcttcgaacccctgaccttgtatatattatgcattgtccttaccaactgag |
15764042 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #4
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 712 - 743
Target Start/End: Original strand, 5031172 - 5031203
Alignment:
Q |
712 |
ttgtatatattatgcattgtccttatcaactg |
743 |
Q |
|
|
|||||||||||||||||||||||||||||||| |
|
|
T |
5031172 |
ttgtatatattatgcattgtccttatcaactg |
5031203 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #5
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 698 - 745
Target Start/End: Complemental strand, 9374439 - 9374392
Alignment:
Q |
698 |
ttcgaacccagatcttgtatatattatgcattgtccttatcaactgag |
745 |
Q |
|
|
|||||||| |||| || ||||||||||||||||||| ||||||||||| |
|
|
T |
9374439 |
ttcgaaccaagattttatatatattatgcattgtccctatcaactgag |
9374392 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #6
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 704 - 747
Target Start/End: Complemental strand, 39949863 - 39949820
Alignment:
Q |
704 |
cccagatcttgtatatattatgcattgtccttatcaactgagtt |
747 |
Q |
|
|
|||||| ||||||||||||||||||||| |||| |||||||||| |
|
|
T |
39949863 |
cccagaccttgtatatattatgcattgttcttaccaactgagtt |
39949820 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #7
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 688 - 747
Target Start/End: Original strand, 49875593 - 49875652
Alignment:
Q |
688 |
gtgtccgggcttcgaacccagatcttgtatatattatgcattgtccttatcaactgagtt |
747 |
Q |
|
|
||||||||| ||||||| || |||| ||||||||||||||||||||| |||||||||| |
|
|
T |
49875593 |
gtgtccggggttcgaacatggaccttgcatatattatgcattgtccttaccaactgagtt |
49875652 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #8
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 704 - 746
Target Start/End: Original strand, 16033460 - 16033502
Alignment:
Q |
704 |
cccagatcttgtatatattatgcattgtccttatcaactgagt |
746 |
Q |
|
|
|||||| |||| |||||||||||||||||| |||||||||||| |
|
|
T |
16033460 |
cccagaccttgcatatattatgcattgtccctatcaactgagt |
16033502 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #9
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 688 - 745
Target Start/End: Original strand, 38448859 - 38448917
Alignment:
Q |
688 |
gtgtccgggcttcgaacccag-atcttgtatatattatgcattgtccttatcaactgag |
745 |
Q |
|
|
||||||||| ||||||||| | | |||| ||||||||||||||||||||| |||||||| |
|
|
T |
38448859 |
gtgtccgggattcgaaccccggaccttgcatatattatgcattgtccttaccaactgag |
38448917 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #10
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 713 - 751
Target Start/End: Original strand, 38923029 - 38923067
Alignment:
Q |
713 |
tgtatatattatgcattgtccttatcaactgagttgagt |
751 |
Q |
|
|
||||||| ||||||||||||||||||||||||| ||||| |
|
|
T |
38923029 |
tgtatattttatgcattgtccttatcaactgagatgagt |
38923067 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #11
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 704 - 745
Target Start/End: Original strand, 24236628 - 24236669
Alignment:
Q |
704 |
cccagatcttgtatatattatgcattgtccttatcaactgag |
745 |
Q |
|
|
|||||| |||||| ||||||||||||||||||| |||||||| |
|
|
T |
24236628 |
cccagaccttgtaaatattatgcattgtccttaccaactgag |
24236669 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #12
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 706 - 747
Target Start/End: Original strand, 28039872 - 28039913
Alignment:
Q |
706 |
cagatcttgtatatattatgcattgtccttatcaactgagtt |
747 |
Q |
|
|
|||| |||| ||||||||||||||||||||| |||||||||| |
|
|
T |
28039872 |
cagaccttgcatatattatgcattgtccttaccaactgagtt |
28039913 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #13
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 706 - 747
Target Start/End: Original strand, 45773554 - 45773595
Alignment:
Q |
706 |
cagatcttgtatatattatgcattgtccttatcaactgagtt |
747 |
Q |
|
|
|||||||||||||| ||||||||||||| || |||||||||| |
|
|
T |
45773554 |
cagatcttgtatattttatgcattgtccgtaccaactgagtt |
45773595 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #14
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 706 - 747
Target Start/End: Complemental strand, 46334824 - 46334783
Alignment:
Q |
706 |
cagatcttgtatatattatgcattgtccttatcaactgagtt |
747 |
Q |
|
|
|||| ||||||||| ||||||||||| ||||||||||||||| |
|
|
T |
46334824 |
cagaccttgtatattttatgcattgttcttatcaactgagtt |
46334783 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6 (Bit Score: 35; Significance: 0.0000000004; HSPs: 16)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 698 - 747
Target Start/End: Complemental strand, 6610135 - 6610085
Alignment:
Q |
698 |
ttcgaaccc-agatcttgtatatattatgcattgtccttatcaactgagtt |
747 |
Q |
|
|
||||||||| |||||||| ||||||||||||||| |||||||||||||||| |
|
|
T |
6610135 |
ttcgaaccctagatcttgcatatattatgcattgcccttatcaactgagtt |
6610085 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #2
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 701 - 745
Target Start/End: Complemental strand, 18256937 - 18256893
Alignment:
Q |
701 |
gaacccagatcttgtatatattatgcattgtccttatcaactgag |
745 |
Q |
|
|
|||||| || |||| |||||||||||||||||||||||||||||| |
|
|
T |
18256937 |
gaacccggaccttgcatatattatgcattgtccttatcaactgag |
18256893 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #3
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 709 - 745
Target Start/End: Complemental strand, 26522518 - 26522482
Alignment:
Q |
709 |
atcttgtatatattatgcattgtccttatcaactgag |
745 |
Q |
|
|
|||||||||||||||||||||||||||| |||||||| |
|
|
T |
26522518 |
atcttgtatatattatgcattgtccttaccaactgag |
26522482 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #4
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 693 - 747
Target Start/End: Complemental strand, 2445362 - 2445307
Alignment:
Q |
693 |
cgggcttcgaacccaga-tcttgtatatattatgcattgtccttatcaactgagtt |
747 |
Q |
|
|
|||| ||||||||| || |||||||||||||||||||||| | ||||||||||||| |
|
|
T |
2445362 |
cggggttcgaaccccgaatcttgtatatattatgcattgttcatatcaactgagtt |
2445307 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #5
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 704 - 747
Target Start/End: Original strand, 3373391 - 3373434
Alignment:
Q |
704 |
cccagatcttgtatatattatgcattgtccttatcaactgagtt |
747 |
Q |
|
|
|||| |||||| |||||||||||||||||| ||||||||||||| |
|
|
T |
3373391 |
cccaaatcttgcatatattatgcattgtccatatcaactgagtt |
3373434 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #6
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 708 - 747
Target Start/End: Original strand, 6864147 - 6864186
Alignment:
Q |
708 |
gatcttgtatatattatgcattgtccttatcaactgagtt |
747 |
Q |
|
|
||||||| |||||||||||||||||||| ||||||||||| |
|
|
T |
6864147 |
gatcttgcatatattatgcattgtccttttcaactgagtt |
6864186 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #7
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 704 - 747
Target Start/End: Original strand, 14169555 - 14169598
Alignment:
Q |
704 |
cccagatcttgtatatattatgcattgtccttatcaactgagtt |
747 |
Q |
|
|
|||| |||||| ||||||| |||||||||||||||||||||||| |
|
|
T |
14169555 |
cccaaatcttgcatatattctgcattgtccttatcaactgagtt |
14169598 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #8
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 701 - 747
Target Start/End: Complemental strand, 1769822 - 1769776
Alignment:
Q |
701 |
gaacccagatcttgtatatattatgcattgtccttatcaactgagtt |
747 |
Q |
|
|
||||||||| |||| |||| ||||||||||||||| ||||||||||| |
|
|
T |
1769822 |
gaacccagaccttgcatattttatgcattgtccttgtcaactgagtt |
1769776 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #9
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 711 - 745
Target Start/End: Complemental strand, 9923284 - 9923250
Alignment:
Q |
711 |
cttgtatatattatgcattgtccttatcaactgag |
745 |
Q |
|
|
|||||||||||||||||||||||||||||| |||| |
|
|
T |
9923284 |
cttgtatatattatgcattgtccttatcaattgag |
9923250 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #10
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 711 - 745
Target Start/End: Complemental strand, 33824925 - 33824891
Alignment:
Q |
711 |
cttgtatatattatgcattgtccttatcaactgag |
745 |
Q |
|
|
|||| |||||||||||||||||||||||||||||| |
|
|
T |
33824925 |
cttgcatatattatgcattgtccttatcaactgag |
33824891 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #11
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 704 - 745
Target Start/End: Complemental strand, 334191 - 334150
Alignment:
Q |
704 |
cccagatcttgtatatattatgcattgtccttatcaactgag |
745 |
Q |
|
|
|||||| |||| ||||||||||||||||| |||||||||||| |
|
|
T |
334191 |
cccagaccttgcatatattatgcattgtctttatcaactgag |
334150 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #12
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 708 - 745
Target Start/End: Complemental strand, 2692262 - 2692225
Alignment:
Q |
708 |
gatcttgtatatattatgcattgtccttatcaactgag |
745 |
Q |
|
|
||||||| |||||||||||||||||| ||||||||||| |
|
|
T |
2692262 |
gatcttgcatatattatgcattgtccatatcaactgag |
2692225 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #13
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 706 - 747
Target Start/End: Complemental strand, 10278502 - 10278461
Alignment:
Q |
706 |
cagatcttgtatatattatgcattgtccttatcaactgagtt |
747 |
Q |
|
|
||||||||| |||||||||||||||||| |||||| |||||| |
|
|
T |
10278502 |
cagatcttgcatatattatgcattgtccatatcaattgagtt |
10278461 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #14
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 704 - 745
Target Start/End: Original strand, 14918310 - 14918351
Alignment:
Q |
704 |
cccagatcttgtatatattatgcattgtccttatcaactgag |
745 |
Q |
|
|
|||||| ||||||||||||||||||||||| || |||||||| |
|
|
T |
14918310 |
cccagaccttgtatatattatgcattgtccctaccaactgag |
14918351 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #15
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 708 - 741
Target Start/End: Original strand, 26303824 - 26303857
Alignment:
Q |
708 |
gatcttgtatatattatgcattgtccttatcaac |
741 |
Q |
|
|
|||||||||||||||||| ||||||||||||||| |
|
|
T |
26303824 |
gatcttgtatatattatgtattgtccttatcaac |
26303857 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #16
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 712 - 745
Target Start/End: Original strand, 26521133 - 26521166
Alignment:
Q |
712 |
ttgtatatattatgcattgtccttatcaactgag |
745 |
Q |
|
|
||||||||||||||||||||||||| |||||||| |
|
|
T |
26521133 |
ttgtatatattatgcattgtccttaccaactgag |
26521166 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0045 (Bit Score: 31; Significance: 0.00000009; HSPs: 1)
Name: scaffold0045
Description:
Target: scaffold0045; HSP #1
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 717 - 751
Target Start/End: Complemental strand, 32821 - 32787
Alignment:
Q |
717 |
tatattatgcattgtccttatcaactgagttgagt |
751 |
Q |
|
|
|||||||||||||||||||||||| |||||||||| |
|
|
T |
32821 |
tatattatgcattgtccttatcaattgagttgagt |
32787 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0016 (Bit Score: 31; Significance: 0.00000009; HSPs: 1)
Name: scaffold0016
Description:
Target: scaffold0016; HSP #1
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 704 - 746
Target Start/End: Complemental strand, 99088 - 99046
Alignment:
Q |
704 |
cccagatcttgtatatattatgcattgtccttatcaactgagt |
746 |
Q |
|
|
|||||| |||| |||||||||||||||||| |||||||||||| |
|
|
T |
99088 |
cccagaccttgcatatattatgcattgtccctatcaactgagt |
99046 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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