View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
Legend |
| Query |
| Query hiting target |
| Query hiting target's complemental strand |
| Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: J5_8_18 (Length: 454)
Name: J5_8_18
Description: Pascalseqs
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
[»] J5_8_18 |
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[»] scaffold0294 (1 HSPs) |
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[»] scaffold0468 (1 HSPs) |
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Alignment Details
Target: chr3 (Bit Score: 257; Significance: 1e-143; HSPs: 10)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 257; E-Value: 1e-143
Query Start/End: Original strand, 1 - 265
Target Start/End: Complemental strand, 47986855 - 47986591
Alignment:
Q |
1 |
ataacaagagtgcctttatcagtagtgaggtcacctgtgcggctatgaaggattttcacgtgatgtgtttccatctatcatttggccttagatgtcacca |
100 |
Q |
|
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||| |
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|
T |
47986855 |
ataacaagagtgcctttatcagtagtgaggtcacctgtgcggctatgaaggattttcacgtgatgtgtttccatctatcatttggtcttggatgtcacca |
47986756 |
T |
|
Q |
101 |
acaaataatctcacatcaccatttcatgcacctgctgccaagtagtagttcccatgaactatcctccttttctaaccaccttcaaaggcttcgaagtctt |
200 |
Q |
|
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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|
T |
47986755 |
acaaataatctcacatcaccatttcatgcacctgctgccaagtagtagttcccatgaactatcctccttttctaaccaccttcaaaggcttcgaagtctt |
47986656 |
T |
|
Q |
201 |
tgggtggattgcaactcagaatgtcaactttctctggatgcaaaaaatattttggatgcattaat |
265 |
Q |
|
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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|
T |
47986655 |
tgggtggattgcaactcagaatgtcaactttctctggatgcaaaaaatattttggatgcattaat |
47986591 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #2
Raw Score: 257; E-Value: 1e-143
Query Start/End: Original strand, 1 - 265
Target Start/End: Complemental strand, 47996142 - 47995878
Alignment:
Q |
1 |
ataacaagagtgcctttatcagtagtgaggtcacctgtgcggctatgaaggattttcacgtgatgtgtttccatctatcatttggccttagatgtcacca |
100 |
Q |
|
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||| |
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|
T |
47996142 |
ataacaagagtgcctttatcagtagtgaggtcacctgtgcggctatgaaggattttcacgtgatgtgtttccatctatcatttggtcttggatgtcacca |
47996043 |
T |
|
Q |
101 |
acaaataatctcacatcaccatttcatgcacctgctgccaagtagtagttcccatgaactatcctccttttctaaccaccttcaaaggcttcgaagtctt |
200 |
Q |
|
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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|
T |
47996042 |
acaaataatctcacatcaccatttcatgcacctgctgccaagtagtagttcccatgaactatcctccttttctaaccaccttcaaaggcttcgaagtctt |
47995943 |
T |
|
Q |
201 |
tgggtggattgcaactcagaatgtcaactttctctggatgcaaaaaatattttggatgcattaat |
265 |
Q |
|
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
T |
47995942 |
tgggtggattgcaactcagaatgtcaactttctctggatgcaaaaaatattttggatgcattaat |
47995878 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #3
Raw Score: 257; E-Value: 1e-143
Query Start/End: Original strand, 1 - 265
Target Start/End: Complemental strand, 48005429 - 48005165
Alignment:
Q |
1 |
ataacaagagtgcctttatcagtagtgaggtcacctgtgcggctatgaaggattttcacgtgatgtgtttccatctatcatttggccttagatgtcacca |
100 |
Q |
|
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||| |
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|
T |
48005429 |
ataacaagagtgcctttatcagtagtgaggtcacctgtgcggctatgaaggattttcacgtgatgtgtttccatctatcatttggtcttggatgtcacca |
48005330 |
T |
|
Q |
101 |
acaaataatctcacatcaccatttcatgcacctgctgccaagtagtagttcccatgaactatcctccttttctaaccaccttcaaaggcttcgaagtctt |
200 |
Q |
|
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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|
T |
48005329 |
acaaataatctcacatcaccatttcatgcacctgctgccaagtagtagttcccatgaactatcctccttttctaaccaccttcaaaggcttcgaagtctt |
48005230 |
T |
|
Q |
201 |
tgggtggattgcaactcagaatgtcaactttctctggatgcaaaaaatattttggatgcattaat |
265 |
Q |
|
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
T |
48005229 |
tgggtggattgcaactcagaatgtcaactttctctggatgcaaaaaatattttggatgcattaat |
48005165 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #4
Raw Score: 257; E-Value: 1e-143
Query Start/End: Original strand, 1 - 265
Target Start/End: Complemental strand, 48014714 - 48014450
Alignment:
Q |
1 |
ataacaagagtgcctttatcagtagtgaggtcacctgtgcggctatgaaggattttcacgtgatgtgtttccatctatcatttggccttagatgtcacca |
100 |
Q |
|
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||| |
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|
T |
48014714 |
ataacaagagtgcctttatcagtagtgaggtcacctgtgcggctatgaaggattttcacgtgatgtgtttccatctatcatttggtcttggatgtcacca |
48014615 |
T |
|
Q |
101 |
acaaataatctcacatcaccatttcatgcacctgctgccaagtagtagttcccatgaactatcctccttttctaaccaccttcaaaggcttcgaagtctt |
200 |
Q |
|
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
T |
48014614 |
acaaataatctcacatcaccatttcatgcacctgctgccaagtagtagttcccatgaactatcctccttttctaaccaccttcaaaggcttcgaagtctt |
48014515 |
T |
|
Q |
201 |
tgggtggattgcaactcagaatgtcaactttctctggatgcaaaaaatattttggatgcattaat |
265 |
Q |
|
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
T |
48014514 |
tgggtggattgcaactcagaatgtcaactttctctggatgcaaaaaatattttggatgcattaat |
48014450 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #5
Raw Score: 112; E-Value: 2e-56
Query Start/End: Original strand, 260 - 378
Target Start/End: Complemental strand, 47987481 - 47987363
Alignment:
Q |
260 |
attaatgcttaatttagcactttatctcatggtgaggtgcatgcctataagattgtgaactttttgtgaacaactaagaaattaggggatgattttaaat |
359 |
Q |
|
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
T |
47987481 |
attaatgcttaatttagcactttatctcatggtgaggtgcatgcctataagattgtgaactttttgtgaacaactaagaaattaggggatgattttaaat |
47987382 |
T |
|
Q |
360 |
ttgatttatngcgaagtct |
378 |
Q |
|
|
||||||||| | ||||||| |
|
|
T |
47987381 |
ttgatttattgtgaagtct |
47987363 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #6
Raw Score: 112; E-Value: 2e-56
Query Start/End: Original strand, 260 - 378
Target Start/End: Complemental strand, 47996768 - 47996650
Alignment:
Q |
260 |
attaatgcttaatttagcactttatctcatggtgaggtgcatgcctataagattgtgaactttttgtgaacaactaagaaattaggggatgattttaaat |
359 |
Q |
|
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
T |
47996768 |
attaatgcttaatttagcactttatctcatggtgaggtgcatgcctataagattgtgaactttttgtgaacaactaagaaattaggggatgattttaaat |
47996669 |
T |
|
Q |
360 |
ttgatttatngcgaagtct |
378 |
Q |
|
|
||||||||| | ||||||| |
|
|
T |
47996668 |
ttgatttattgtgaagtct |
47996650 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #7
Raw Score: 112; E-Value: 2e-56
Query Start/End: Original strand, 260 - 378
Target Start/End: Complemental strand, 48006055 - 48005937
Alignment:
Q |
260 |
attaatgcttaatttagcactttatctcatggtgaggtgcatgcctataagattgtgaactttttgtgaacaactaagaaattaggggatgattttaaat |
359 |
Q |
|
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
T |
48006055 |
attaatgcttaatttagcactttatctcatggtgaggtgcatgcctataagattgtgaactttttgtgaacaactaagaaattaggggatgattttaaat |
48005956 |
T |
|
Q |
360 |
ttgatttatngcgaagtct |
378 |
Q |
|
|
||||||||| | ||||||| |
|
|
T |
48005955 |
ttgatttattgtgaagtct |
48005937 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #8
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 311 - 378
Target Start/End: Complemental strand, 48015289 - 48015222
Alignment:
Q |
311 |
attgtgaactttttgtgaacaactaagaaattaggggatgattttaaatttgatttatngcgaagtct |
378 |
Q |
|
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||| |
|
|
T |
48015289 |
attgtgaactttttgtgaacaactaagaaattaggggatgattttaaatttgatttattgtgaagtct |
48015222 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #9
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 38 - 104
Target Start/End: Complemental strand, 6905872 - 6905806
Alignment:
Q |
38 |
tgcggctatgaaggattttcacgtgatgtgtttccatctatcatttggccttagatgtcaccaacaa |
104 |
Q |
|
|
||||| ||||||||||| ||||||||| | ||||| ||| |||||||| ||| |||||||||||||| |
|
|
T |
6905872 |
tgcggatatgaaggattatcacgtgatatttttccttctctcatttggtcttggatgtcaccaacaa |
6905806 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #10
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 44 - 104
Target Start/End: Complemental strand, 32411143 - 32411083
Alignment:
Q |
44 |
tatgaaggattttcacgtgatgtgtttccatctatcatttggccttagatgtcaccaacaa |
104 |
Q |
|
|
||||||||||| |||| ||| || ||||| ||| |||||||| |||||||||||||||||| |
|
|
T |
32411143 |
tatgaaggattatcacatgaagtatttccctctctcatttggtcttagatgtcaccaacaa |
32411083 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6 (Bit Score: 70; Significance: 2e-31; HSPs: 30)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 39 - 140
Target Start/End: Complemental strand, 5157573 - 5157472
Alignment:
Q |
39 |
gcggctatgaaggattttcacgtgatgtgtttccatctatcatttggccttagatgtcaccaacaaataatctcacatcaccatttcatgcacctgctgc |
138 |
Q |
|
|
||||||||||||||||||| ||||||||||||||||||||||||||| ||| |||||||||||||||||||||| |||| |||||||| || ||||||| |
|
|
T |
5157573 |
gcggctatgaaggattttctcgtgatgtgtttccatctatcatttggtcttggatgtcaccaacaaataatctcccatctccatttcaaacatctgctgc |
5157474 |
T |
|
Q |
139 |
ca |
140 |
Q |
|
|
|| |
|
|
T |
5157473 |
ca |
5157472 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #2
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 36 - 126
Target Start/End: Original strand, 5426043 - 5426133
Alignment:
Q |
36 |
tgtgcggctatgaaggattttcacgtgatgtgtttccatctatcatttggccttagatgtcaccaacaaataatctcacatcaccatttca |
126 |
Q |
|
|
|||||||||||||||||||||||||||||||||||||| | ||||||||| ||| |||||||||||||||||||||| |||| |||||||| |
|
|
T |
5426043 |
tgtgcggctatgaaggattttcacgtgatgtgtttccagcgatcatttggtcttggatgtcaccaacaaataatctcccatccccatttca |
5426133 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #3
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 41 - 140
Target Start/End: Complemental strand, 5354557 - 5354458
Alignment:
Q |
41 |
ggctatgaaggattttcacgtgatgtgtttccatctatcatttggccttagatgtcaccaacaaataatctcacatcaccatttcatgcacctgctgcca |
140 |
Q |
|
|
|||||||||||||| |||||||||||||||||||||||||||||| ||| |||||||||||||||||||||| ||| |||||||| || ||||||||| |
|
|
T |
5354557 |
ggctatgaaggattctcacgtgatgtgtttccatctatcatttggtcttggatgtcaccaacaaataatctccgatctccatttcaaacatctgctgcca |
5354458 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #4
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 36 - 126
Target Start/End: Complemental strand, 5066642 - 5066552
Alignment:
Q |
36 |
tgtgcggctatgaaggattttcacgtgatgtgtttccatctatcatttggccttagatgtcaccaacaaataatctcacatcaccatttca |
126 |
Q |
|
|
||||||||||||||||||| || ||||||||||||||||||||||||| | ||| |||||||||||||||||||||| |||| | |||||| |
|
|
T |
5066642 |
tgtgcggctatgaaggattctcgcgtgatgtgtttccatctatcattttgtcttggatgtcaccaacaaataatctcccatccctatttca |
5066552 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #5
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 36 - 126
Target Start/End: Complemental strand, 5073856 - 5073766
Alignment:
Q |
36 |
tgtgcggctatgaaggattttcacgtgatgtgtttccatctatcatttggccttagatgtcaccaacaaataatctcacatcaccatttca |
126 |
Q |
|
|
||||||||||||||||||| |||||||||||||| ||||| ||||||||| ||| ||||||||| |||||||||||||| || |||||||| |
|
|
T |
5073856 |
tgtgcggctatgaaggattctcacgtgatgtgttcccatcgatcatttggtcttggatgtcaccgacaaataatctcacttccccatttca |
5073766 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #6
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 139 - 259
Target Start/End: Original strand, 5397215 - 5397335
Alignment:
Q |
139 |
caagtagtagttcccatgaactatcctccttttctaaccaccttcaaaggcttcgaagtctttgggtggattgcaactcagaatgtcaactttctctgga |
238 |
Q |
|
|
||||||||||||| || |||||||| || ||||| || || |||| |||||||||||||||||| ||||||||||| || ||| |||||||||||| || |
|
|
T |
5397215 |
caagtagtagttcgcacgaactatcatctttttcgaaacaacttccaaggcttcgaagtctttgcgtggattgcaattctgaagatcaactttctcttga |
5397314 |
T |
|
Q |
239 |
tgcaaaaaatattttggatgc |
259 |
Q |
|
|
|||||||| ||||||||||| |
|
|
T |
5397315 |
tgcaaaaataattttggatgc |
5397335 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #7
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 35 - 112
Target Start/End: Complemental strand, 5128366 - 5128289
Alignment:
Q |
35 |
ctgtgcggctatgaaggattttcacgtgatgtgtttccatctatcatttggccttagatgtcaccaacaaataatctc |
112 |
Q |
|
|
||||||||| |||||||||||||| |||||||||||||||||||||| ||| ||| |||||||||||||||| ||||| |
|
|
T |
5128366 |
ctgtgcggccatgaaggattttcaagtgatgtgtttccatctatcatctggtcttggatgtcaccaacaaatgatctc |
5128289 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #8
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 41 - 111
Target Start/End: Complemental strand, 5102557 - 5102487
Alignment:
Q |
41 |
ggctatgaaggattttcacgtgatgtgtttccatctatcatttggccttagatgtcaccaacaaataatct |
111 |
Q |
|
|
|||||||||||| |||||| ||||||||||||||||||||| ||| ||| ||||||||||||||||||||| |
|
|
T |
5102557 |
ggctatgaaggactttcacatgatgtgtttccatctatcatctggtcttggatgtcaccaacaaataatct |
5102487 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #9
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 45 - 117
Target Start/End: Original strand, 5096850 - 5096922
Alignment:
Q |
45 |
atgaaggattttcacgtgatgtgtttccatctatcatttggccttagatgtcaccaacaaataatctcacatc |
117 |
Q |
|
|
|||||||||||||||||||||||||||| |||||||| ||| ||| | |||||||||||||||||||| |||| |
|
|
T |
5096850 |
atgaaggattttcacgtgatgtgtttccgtctatcatctggtcttggttgtcaccaacaaataatctctcatc |
5096922 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #10
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 44 - 126
Target Start/End: Complemental strand, 5181867 - 5181785
Alignment:
Q |
44 |
tatgaaggattttcacgtgatgtgtttccatctatcatttggccttagatgtcaccaacaaataatctcacatcaccatttca |
126 |
Q |
|
|
||||||||||| |||| ||||||||||||| | ||||||||| ||| ||||||||| |||||||||||| |||| |||||||| |
|
|
T |
5181867 |
tatgaaggattctcacatgatgtgtttccagcgatcatttggtcttggatgtcaccgacaaataatctcccatccccatttca |
5181785 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #11
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 36 - 104
Target Start/End: Original strand, 5176872 - 5176940
Alignment:
Q |
36 |
tgtgcggctatgaaggattttcacgtgatgtgtttccatctatcatttggccttagatgtcaccaacaa |
104 |
Q |
|
|
||||||||||||||||||| ||||||||| | |||||||| ||||||||| ||| |||||||||||||| |
|
|
T |
5176872 |
tgtgcggctatgaaggattctcacgtgatatatttccatcaatcatttggtcttggatgtcaccaacaa |
5176940 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #12
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 36 - 104
Target Start/End: Complemental strand, 5243861 - 5243793
Alignment:
Q |
36 |
tgtgcggctatgaaggattttcacgtgatgtgtttccatctatcatttggccttagatgtcaccaacaa |
104 |
Q |
|
|
|||| |||||||||||||||||||| ||||| |||||||||||||| ||| ||| |||||||||||||| |
|
|
T |
5243861 |
tgtgtggctatgaaggattttcacgcgatgtatttccatctatcatctggtcttggatgtcaccaacaa |
5243793 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #13
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 36 - 104
Target Start/End: Original strand, 5278699 - 5278767
Alignment:
Q |
36 |
tgtgcggctatgaaggattttcacgtgatgtgtttccatctatcatttggccttagatgtcaccaacaa |
104 |
Q |
|
|
||||||||||||||||||| ||||||||| | |||||||| ||||||||| ||| |||||||||||||| |
|
|
T |
5278699 |
tgtgcggctatgaaggattctcacgtgatatatttccatcaatcatttggtcttggatgtcaccaacaa |
5278767 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #14
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 36 - 112
Target Start/End: Original strand, 5370704 - 5370780
Alignment:
Q |
36 |
tgtgcggctatgaaggattttcacgtgatgtgtttccatctatcatttggccttagatgtcaccaacaaataatctc |
112 |
Q |
|
|
|||| ||| ||| ||||||||||| |||||| |||||||||||||||||| ||| |||||||||||||||| ||||| |
|
|
T |
5370704 |
tgtgtggccatgtaggattttcacatgatgtttttccatctatcatttggtcttggatgtcaccaacaaattatctc |
5370780 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #15
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 36 - 140
Target Start/End: Original strand, 5397083 - 5397187
Alignment:
Q |
36 |
tgtgcggctatgaaggattttcacgtgatgtgtttccatctatcatttggccttagatgtcaccaacaaataatctcacatcaccatttcatgcacctgc |
135 |
Q |
|
|
||||||| ||||||||||||||| |||| ||||||||| ||||||||| | ||| |||||||||||||| ||| ||| ||| |||||||| || |||| |
|
|
T |
5397083 |
tgtgcggatatgaaggattttcatgtgaagtgtttccagctatcatttcgtcttggatgtcaccaacaattaacctcccatttccatttcaaacatctgc |
5397182 |
T |
|
Q |
136 |
tgcca |
140 |
Q |
|
|
||||| |
|
|
T |
5397183 |
tgcca |
5397187 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #16
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 35 - 104
Target Start/End: Original strand, 5344993 - 5345062
Alignment:
Q |
35 |
ctgtgcggctatgaaggattttcacgtgatgtgtttccatctatcatttggccttagatgtcaccaacaa |
104 |
Q |
|
|
||||| |||||||||||||| ||||| ||||| |||||||||||||| ||| ||| |||||||||||||| |
|
|
T |
5344993 |
ctgtgtggctatgaaggattctcacgcgatgtatttccatctatcatctggtcttggatgtcaccaacaa |
5345062 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #17
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 35 - 104
Target Start/End: Complemental strand, 5690108 - 5690039
Alignment:
Q |
35 |
ctgtgcggctatgaaggattttcacgtgatgtgtttccatctatcatttggccttagatgtcaccaacaa |
104 |
Q |
|
|
|||||||| |||||||||| ||||||||| | |||||||||||||||||| ||| |||||||||||||| |
|
|
T |
5690108 |
ctgtgcggacatgaaggattctcacgtgatatatttccatctatcatttggtcttggatgtcaccaacaa |
5690039 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #18
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 138 - 234
Target Start/End: Original strand, 5096972 - 5097068
Alignment:
Q |
138 |
ccaagtagtagttcccatgaactatcctccttttctaaccaccttcaaaggcttcgaagtctttgggtggattgcaactcagaatgtcaactttctc |
234 |
Q |
|
|
|||| |||||||||||||||||||| || |||| || |||||| ||| |||||||||||||||||||| |||| ||||||| ||||||||||| |
|
|
T |
5096972 |
ccaaatagtagttcccatgaactattatcgatttccaagtaccttccaagtcttcgaagtctttgggtggagtgcagctcagaacttcaactttctc |
5097068 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #19
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 36 - 112
Target Start/End: Original strand, 5383459 - 5383535
Alignment:
Q |
36 |
tgtgcggctatgaaggattttcacgtgatgtgtttccatctatcatttggccttagatgtcaccaacaaataatctc |
112 |
Q |
|
|
|||||||| |||||||||| |||||||||||||||||||| |||||| | ||| |||||| |||||||||||||| |
|
|
T |
5383459 |
tgtgcggccatgaaggattctcacgtgatgtgtttccatccatcattaagtcttggatgtcctcaacaaataatctc |
5383535 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #20
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 168 - 259
Target Start/End: Complemental strand, 5354401 - 5354310
Alignment:
Q |
168 |
ttttctaaccaccttcaaaggcttcgaagtctttgggtggattgcaactcagaatgtcaactttctctggatgcaaaaaatattttggatgc |
259 |
Q |
|
|
|||||| ||||||||| ||| |||||||||||| ||||||||||||| || | | |||||||||||| |||||||||| |||||| |||| |
|
|
T |
5354401 |
ttttctgaccaccttccaagacttcgaagtcttcgggtggattgcaattccgtagatcaactttctctagatgcaaaaacaattttgaatgc |
5354310 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #21
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 36 - 126
Target Start/End: Original strand, 5350527 - 5350611
Alignment:
Q |
36 |
tgtgcggctatgaaggattttcacgtgatgtgtttccatctatcatttggccttagatgtcaccaacaaataatctcacatcaccatttca |
126 |
Q |
|
|
||||||||||||||||||||||||||||||||||| ||| ||||| ||| |||||||||||||||||||| | |||| |||||||| |
|
|
T |
5350527 |
tgtgcggctatgaaggattttcacgtgatgtgttt--atcattcatt----cttggatgtcaccaacaaataatcacccatccccatttca |
5350611 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #22
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 187 - 259
Target Start/End: Complemental strand, 5284154 - 5284082
Alignment:
Q |
187 |
ggcttcgaagtctttgggtggattgcaactcagaatgtcaactttctctggatgcaaaaaatattttggatgc |
259 |
Q |
|
|
|||||| |||||||||||||||||||||||| ||| |||||||||||| ||| ||| || ||||||||||| |
|
|
T |
5284154 |
ggcttcaaagtctttgggtggattgcaactccgaagatcaactttctcttgattcaacaatgattttggatgc |
5284082 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #23
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 143 - 233
Target Start/End: Complemental strand, 5066506 - 5066416
Alignment:
Q |
143 |
tagtagttcccatgaactatcctccttttctaaccaccttcaaaggcttcgaagtctttgggtggattgcaactcagaatgtcaactttct |
233 |
Q |
|
|
|||||| |||||||||||||| || |||| || |||||| ||| |||||||||||||||||||| |||| |||||| |||||||||| |
|
|
T |
5066506 |
tagtagctcccatgaactatcatcaatttccaagtaccttccaagtcttcgaagtctttgggtggagtgcagttcagaacatcaactttct |
5066416 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #24
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 178 - 259
Target Start/End: Complemental strand, 5137443 - 5137362
Alignment:
Q |
178 |
accttcaaaggcttcgaagtctttgggtggattgcaactcagaatgtcaactttctctggatgcaaaaaatattttggatgc |
259 |
Q |
|
|
|||||| ||| |||||||||||||||||||| |||| |||||| |||||||||||| |||||| || ||||||||||| |
|
|
T |
5137443 |
accttccaagtcttcgaagtctttgggtggagtgcagttcagaacgtcaactttctcatgatgcagcaataattttggatgc |
5137362 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #25
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 143 - 259
Target Start/End: Complemental strand, 5073720 - 5073604
Alignment:
Q |
143 |
tagtagttcccatgaactatcctccttttctaaccaccttcaaaggcttcgaagtctttgggtggattgcaactcagaatgtcaactttctctggatgca |
242 |
Q |
|
|
||||||||||||||||||||| || |||| || |||||| | |||||||| ||||||||||||| ||| ||| || ||||||||||| |||||| |
|
|
T |
5073720 |
tagtagttcccatgaactatcatctatttccaattaccttccatggcttcgatgtctttgggtggaatgcggatcaaaacttcaactttctcaagatgca |
5073621 |
T |
|
Q |
243 |
aaaaatattttggatgc |
259 |
Q |
|
|
||| ||||||||||| |
|
|
T |
5073620 |
gaaagaattttggatgc |
5073604 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #26
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 143 - 259
Target Start/End: Complemental strand, 5102426 - 5102310
Alignment:
Q |
143 |
tagtagttcccatgaactatcctccttttctaaccaccttcaaaggcttcgaagtctttgggtggattgcaactcagaatgtcaactttctctggatgca |
242 |
Q |
|
|
|||||||||||| |||||||| || |||| | |||||| || |||||||||||||||||||| |||| |||||| |||||||||||| |||||| |
|
|
T |
5102426 |
tagtagttcccacgaactatcatcgatttccatgtaccttccaaatcttcgaagtctttgggtggagtgcagttcagaacgtcaactttctcatgatgca |
5102327 |
T |
|
Q |
243 |
aaaaatattttggatgc |
259 |
Q |
|
|
|| ||||||||||| |
|
|
T |
5102326 |
gcaataattttggatgc |
5102310 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #27
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 36 - 111
Target Start/End: Original strand, 5434168 - 5434243
Alignment:
Q |
36 |
tgtgcggctatgaaggattttcacgtgatgtgtttccatctatcatttggccttagatgtcaccaacaaataatct |
111 |
Q |
|
|
||||||| ||||||||||| |||| ||| | ||||||| ||||||| | ||| ||||||||||||||||||||| |
|
|
T |
5434168 |
tgtgcggttatgaaggattctcacacgatttatttccatttatcattcagtcttggatgtcaccaacaaataatct |
5434243 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #28
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 178 - 259
Target Start/End: Complemental strand, 5128194 - 5128113
Alignment:
Q |
178 |
accttcaaaggcttcgaagtctttgggtggattgcaactcagaatgtcaactttctctggatgcaaaaaatattttggatgc |
259 |
Q |
|
|
|||||| ||| ||||||||||||||| |||| |||| ||||||| ||||||||||| |||||| || ||||||||||| |
|
|
T |
5128194 |
accttccaagtcttcgaagtctttggatggagtgcagctcagaacttcaactttctcatgatgcagcaataattttggatgc |
5128113 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #29
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 36 - 109
Target Start/End: Original strand, 5447720 - 5447793
Alignment:
Q |
36 |
tgtgcggctatgaaggattttcacgtgatgtgtttccatctatcatttggccttagatgtcaccaacaaataat |
109 |
Q |
|
|
||||||| | |||||||| || | |||||||||||||||||| ||| || ||| ||||||||||| ||||||| |
|
|
T |
5447720 |
tgtgcggatttgaaggatcctcgcatgatgtgtttccatctattattcggtcttggatgtcaccaagaaataat |
5447793 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #30
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 153 - 213
Target Start/End: Complemental strand, 5257130 - 5257070
Alignment:
Q |
153 |
catgaactatcctccttttctaaccaccttcaaaggcttcgaagtctttgggtggattgca |
213 |
Q |
|
|
|||||||| || || ||||| ||||| |||| ||||||| |||||||||||||||||||| |
|
|
T |
5257130 |
catgaactttcatctttttcgaaccaacttccaaggcttaaaagtctttgggtggattgca |
5257070 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5 (Bit Score: 62; Significance: 1e-26; HSPs: 4)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 36 - 109
Target Start/End: Original strand, 8877742 - 8877815
Alignment:
Q |
36 |
tgtgcggctatgaaggattttcacgtgatgtgtttccatctatcatttggccttagatgtcaccaacaaataat |
109 |
Q |
|
|
|||||||||||||||||||||| ||||||||||||||||||||||||||| ||| ||||||||||||||||||| |
|
|
T |
8877742 |
tgtgcggctatgaaggattttcgcgtgatgtgtttccatctatcatttggtcttggatgtcaccaacaaataat |
8877815 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #2
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 47 - 102
Target Start/End: Original strand, 20812421 - 20812476
Alignment:
Q |
47 |
gaaggattttcacgtgatgtgtttccatctatcatttggccttagatgtcaccaac |
102 |
Q |
|
|
|||||||| ||||||||||| ||||| ||| |||||||| ||| |||||||||||| |
|
|
T |
20812421 |
gaaggattatcacgtgatgtttttccttctctcatttggtcttggatgtcaccaac |
20812476 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #3
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 44 - 102
Target Start/End: Complemental strand, 12599112 - 12599054
Alignment:
Q |
44 |
tatgaaggattttcacgtgatgtgtttccatctatcatttggccttagatgtcaccaac |
102 |
Q |
|
|
||||||||||| ||||||||||| ||||| ||| ||| |||| ||| |||||||||||| |
|
|
T |
12599112 |
tatgaaggattatcacgtgatgtttttccttctctcaattggtcttggatgtcaccaac |
12599054 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #4
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 44 - 102
Target Start/End: Original strand, 20838773 - 20838831
Alignment:
Q |
44 |
tatgaaggattttcacgtgatgtgtttccatctatcatttggccttagatgtcaccaac |
102 |
Q |
|
|
||||||||||| |||| |||||| ||||| ||| |||||||| ||| |||||||||||| |
|
|
T |
20838773 |
tatgaaggattatcacatgatgtttttccttctctcatttggtcttggatgtcaccaac |
20838831 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7 (Bit Score: 55; Significance: 2e-22; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 36 - 106
Target Start/End: Complemental strand, 36213777 - 36213707
Alignment:
Q |
36 |
tgtgcggctatgaaggattttcacgtgatgtgtttccatctatcatttggccttagatgtcaccaacaaat |
106 |
Q |
|
|
||||||||||||||||||| |||| ||||||||||||||||||||||||| ||| |||||||||||||||| |
|
|
T |
36213777 |
tgtgcggctatgaaggattctcacatgatgtgtttccatctatcatttggtcttggatgtcaccaacaaat |
36213707 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0294 (Bit Score: 50; Significance: 2e-19; HSPs: 1)
Name: scaffold0294
Description:
Target: scaffold0294; HSP #1
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 36 - 117
Target Start/End: Complemental strand, 8848 - 8767
Alignment:
Q |
36 |
tgtgcggctatgaaggattttcacgtgatgtgtttccatctatcatttggccttagatgtcaccaacaaataatctcacatc |
117 |
Q |
|
|
|||||||| |||||||||| ||||||||||||||||||||||||||| | ||| |||||| ||||||||||||||| |||| |
|
|
T |
8848 |
tgtgcggccatgaaggattctcacgtgatgtgtttccatctatcattaagtcttggatgtctccaacaaataatctcccatc |
8767 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4 (Bit Score: 47; Significance: 1e-17; HSPs: 10)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 44 - 106
Target Start/End: Original strand, 4344787 - 4344849
Alignment:
Q |
44 |
tatgaaggattttcacgtgatgtgtttccatctatcatttggccttagatgtcaccaacaaat |
106 |
Q |
|
|
||||||||||| ||||||||||||||||| |||||||||||| ||| |||||||||||||||| |
|
|
T |
4344787 |
tatgaaggattctcacgtgatgtgtttccttctatcatttggtcttggatgtcaccaacaaat |
4344849 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #2
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 35 - 101
Target Start/End: Complemental strand, 4320568 - 4320502
Alignment:
Q |
35 |
ctgtgcggctatgaaggattttcacgtgatgtgtttccatctatcatttggccttagatgtcaccaa |
101 |
Q |
|
|
||||| || ||||||||||| ||||||||||||||||| |||||||||||| ||| ||||||||||| |
|
|
T |
4320568 |
ctgtgtggatatgaaggattctcacgtgatgtgtttccttctatcatttggtcttggatgtcaccaa |
4320502 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #3
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 44 - 106
Target Start/End: Original strand, 4361218 - 4361280
Alignment:
Q |
44 |
tatgaaggattttcacgtgatgtgtttccatctatcatttggccttagatgtcaccaacaaat |
106 |
Q |
|
|
||||||||||| ||||||||||||||||| |||||||||| | ||| |||||||||||||||| |
|
|
T |
4361218 |
tatgaaggattctcacgtgatgtgtttccttctatcatttcgtcttggatgtcaccaacaaat |
4361280 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #4
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 35 - 112
Target Start/End: Complemental strand, 4123888 - 4123811
Alignment:
Q |
35 |
ctgtgcggctatgaaggattttcacgtgatgtgtttccatctatcatttggccttagatgtcaccaacaaataatctc |
112 |
Q |
|
|
||||| || ||||||||||| || |||||||||||||| |||||||||| | ||| ||||| |||||||||||||||| |
|
|
T |
4123888 |
ctgtgtggatatgaaggattctctcgtgatgtgtttccttctatcatttcgtcttggatgttaccaacaaataatctc |
4123811 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #5
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 44 - 109
Target Start/End: Original strand, 4335486 - 4335551
Alignment:
Q |
44 |
tatgaaggattttcacgtgatgtgtttccatctatcatttggccttagatgtcaccaacaaataat |
109 |
Q |
|
|
||||||||||| || |||||||||||||| ||||| |||||| ||| |||| ||||||||||||| |
|
|
T |
4335486 |
tatgaaggattctcccgtgatgtgtttccttctataatttggtcttggatggtaccaacaaataat |
4335551 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #6
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 48 - 109
Target Start/End: Complemental strand, 6498462 - 6498401
Alignment:
Q |
48 |
aaggattttcacgtgatgtgtttccatctatcatttggccttagatgtcaccaacaaataat |
109 |
Q |
|
|
||||||||||||||||||| ||||| ||| ||||| || ||| |||||||||| |||||||| |
|
|
T |
6498462 |
aaggattttcacgtgatgtatttccttctctcattcggtcttggatgtcaccatcaaataat |
6498401 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #7
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 38 - 105
Target Start/End: Complemental strand, 6532178 - 6532111
Alignment:
Q |
38 |
tgcggctatgaaggattttcacgtgatgtgtttccatctatcatttggccttagatgtcaccaacaaa |
105 |
Q |
|
|
||||||| ||||||||||||| |||||| ||||| ||||||||| || ||| |||||||||| |||| |
|
|
T |
6532178 |
tgcggctttgaaggattttcaaatgatgtatttccttctatcattcggtcttggatgtcaccatcaaa |
6532111 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #8
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 41 - 109
Target Start/End: Complemental strand, 6545391 - 6545323
Alignment:
Q |
41 |
ggctatgaaggattttcacgtgatgtgtttccatctatcatttggccttagatgtcaccaacaaataat |
109 |
Q |
|
|
|||| ||||||||||||||||||||| || || ||| ||||| || ||| | |||||||| |||||||| |
|
|
T |
6545391 |
ggctttgaaggattttcacgtgatgtattcccttctctcattcggtcttggctgtcaccatcaaataat |
6545323 |
T |
|
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #9
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 41 - 109
Target Start/End: Complemental strand, 6588139 - 6588071
Alignment:
Q |
41 |
ggctatgaaggattttcacgtgatgtgtttccatctatcatttggccttagatgtcaccaacaaataat |
109 |
Q |
|
|
|||| ||||||||||||||||||||| || || ||| ||||| || ||| |||||| ||| |||||||| |
|
|
T |
6588139 |
ggctttgaaggattttcacgtgatgtattcccttctctcattcggtcttggatgtcgccatcaaataat |
6588071 |
T |
|
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #10
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 41 - 109
Target Start/End: Original strand, 6675841 - 6675909
Alignment:
Q |
41 |
ggctatgaaggattttcacgtgatgtgtttccatctatcatttggccttagatgtcaccaacaaataat |
109 |
Q |
|
|
|||| |||||||||||||| |||||| ||||| ||| ||||| | ||| |||||||||| |||||||| |
|
|
T |
6675841 |
ggctttgaaggattttcacttgatgtatttccttctctcattaagtcttggatgtcaccatcaaataat |
6675909 |
T |
|
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8 (Bit Score: 38; Significance: 0.000000000003; HSPs: 3)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 49 - 102
Target Start/End: Complemental strand, 3262682 - 3262629
Alignment:
Q |
49 |
aggattttcacgtgatgtgtttccatctatcatttggccttagatgtcaccaac |
102 |
Q |
|
|
|||||||||||||||||| ||||| |||||||||||| ||| |||||||||||| |
|
|
T |
3262682 |
aggattttcacgtgatgtttttccctctatcatttggtcttggatgtcaccaac |
3262629 |
T |
|
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #2
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 48 - 104
Target Start/End: Complemental strand, 3407379 - 3407323
Alignment:
Q |
48 |
aaggattttcacgtgatgtgtttccatctatcatttggccttagatgtcaccaacaa |
104 |
Q |
|
|
||||||| ||||||||||| ||||| |||||||||||| ||| |||||||||||||| |
|
|
T |
3407379 |
aaggattatcacgtgatgtttttccttctatcatttggtcttggatgtcaccaacaa |
3407323 |
T |
|
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #3
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 44 - 101
Target Start/End: Original strand, 3314999 - 3315056
Alignment:
Q |
44 |
tatgaaggattttcacgtgatgtgtttccatctatcatttggccttagatgtcaccaa |
101 |
Q |
|
|
|||||||| || ||||||||||| ||||| |||||||||||| ||| ||||||||||| |
|
|
T |
3314999 |
tatgaaggtttatcacgtgatgtttttccttctatcatttggtcttggatgtcaccaa |
3315056 |
T |
|
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0468 (Bit Score: 31; Significance: 0.00000004; HSPs: 1)
Name: scaffold0468
Description:
Target: scaffold0468; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 38 - 104
Target Start/End: Complemental strand, 6212 - 6146
Alignment:
Q |
38 |
tgcggctatgaaggattttcacgtgatgtgtttccatctatcatttggccttagatgtcaccaacaa |
104 |
Q |
|
|
||||| ||||||||||| ||||||||||| ||||| || | |||||| ||| |||||||||||||| |
|
|
T |
6212 |
tgcggatatgaaggattatcacgtgatgtttttccttcccttatttggtcttggatgtcaccaacaa |
6146 |
T |
|
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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