View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF0095_high_38 (Length: 307)
Name: NF0095_high_38
Description: NF0095
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF0095_high_38 |
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Alignment Details
Target: chr2 (Bit Score: 244; Significance: 1e-135; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 244; E-Value: 1e-135
Query Start/End: Original strand, 32 - 300
Target Start/End: Complemental strand, 9593672 - 9593404
Alignment:
| Q |
32 |
ttctaggacagagaaagaggttaagtaagaaaaaaggcactttcatttcaacctataattacatgagtcattaaataggtctgttctgacatctggttta |
131 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
9593672 |
ttctaggacagagaaagaggttaagtaagaaaaaaggcactttcatttcaacctataattacatgagtcattaaataggtctgttctgacatctggttta |
9593573 |
T |
|
| Q |
132 |
gcatttaaggatttataaatgaaaagaaagnnnnnnntgtggttttttgagctcctttattgtatgtctaggaagaagtagtaatcagtttcttcatccc |
231 |
Q |
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|||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
9593572 |
gcatttaaggatttataaatgaaaagaaagaaaaaaatgtggttttttgagctcctttattgtatgtctaggaagaagtagtaatcagtttcttcatccc |
9593473 |
T |
|
| Q |
232 |
tagaaagaaagtgtgattataggagtgtcttaatttctgtcaatttattatgccccatttcctttgttt |
300 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |
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| T |
9593472 |
tagaaagaaagtgtgattataggagtgtcttaatttctgtcaatttattatgccccatttcttttgttt |
9593404 |
T |
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