View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF0095_high_59 (Length: 207)
Name: NF0095_high_59
Description: NF0095
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF0095_high_59 |
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| [»] chr4 (1 HSPs) |
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Alignment Details
Target: chr4 (Bit Score: 120; Significance: 1e-61; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 120; E-Value: 1e-61
Query Start/End: Original strand, 84 - 207
Target Start/End: Original strand, 50742518 - 50742641
Alignment:
| Q |
84 |
catcatcaagcctgtcttcaacatgtgccggtgctgtcgctagaccaaagaaaaacccattttcttcttctgcaaaagtaaataaataagccatgtttat |
183 |
Q |
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| T |
50742518 |
catcatcaagcctgtcttcaacatgcgccggtgctgtcgctagaccaaagaaaaacccattttcttcttctgcaaaagtaaataaataagccatgtttat |
50742617 |
T |
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| Q |
184 |
attggctcatttgaacttacatac |
207 |
Q |
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| T |
50742618 |
attggctcatttgaacttacatac |
50742641 |
T |
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