View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF0225_high_33 (Length: 258)
Name: NF0225_high_33
Description: NF0225
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF0225_high_33 |
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| [»] chr7 (1 HSPs) |
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Alignment Details
Target: chr7 (Bit Score: 186; Significance: 1e-101; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 186; E-Value: 1e-101
Query Start/End: Original strand, 29 - 258
Target Start/End: Complemental strand, 2675965 - 2675737
Alignment:
| Q |
29 |
agatatttcctattgaatgtaatactatccataagtttttgagccacagatcttaggcacagttgatacaaccaattaatcaaggagctaactattattt |
128 |
Q |
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| T |
2675965 |
agatatttactattgaccgtaatacgatccataagtttttgagacacagatcttaggcacagttgaaacaaccaattaatcaaggagctaactattatta |
2675866 |
T |
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| Q |
129 |
atttacagaaatcaaatgaagttatatttttgaagcatctagttggtacataatttatgcaagattatattacatagagattacattcaggaacttttga |
228 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
2675865 |
atttacagaaatcaaatgaagttatatttttgaagcatctagttagtacataatttatgcaagattatattacatagagattacattcaggaacttttga |
2675766 |
T |
|
| Q |
229 |
aataattttaattttattaagaactaatgt |
258 |
Q |
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||||||||| |||||| ||||||||||||| |
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| T |
2675765 |
aataattttcatttta-taagaactaatgt |
2675737 |
T |
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