View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF0225_low_15 (Length: 404)

Name: NF0225_low_15
Description: NF0225
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF0225_low_15
NF0225_low_15
[»] chr7 (66 HSPs)
chr7 (264-390)||(4680875-4681001)
chr7 (264-391)||(11649986-11650113)
chr7 (264-391)||(23591391-23591519)
chr7 (258-391)||(12140838-12140972)
chr7 (263-391)||(16671604-16671733)
chr7 (263-391)||(17645972-17646101)
chr7 (266-393)||(11646185-11646312)
chr7 (264-391)||(9141937-9142066)
chr7 (264-390)||(22773890-22774015)
chr7 (264-391)||(48640777-48640906)
chr7 (264-390)||(2526931-2527059)
chr7 (264-391)||(11646374-11646502)
chr7 (264-391)||(18486634-18486762)
chr7 (264-393)||(16492520-16492649)
chr7 (260-391)||(22324280-22324412)
chr7 (264-391)||(27716508-27716636)
chr7 (264-390)||(45419614-45419741)
chr7 (264-393)||(48640991-48641121)
chr7 (264-389)||(34837187-34837315)
chr7 (264-390)||(19222105-19222233)
chr7 (287-391)||(4681121-4681227)
chr7 (264-370)||(27716308-27716414)
chr7 (264-391)||(21224138-21224266)
chr7 (264-391)||(23591608-23591736)
chr7 (293-391)||(18487180-18487279)
chr7 (257-391)||(40450078-40450213)
chr7 (265-390)||(45419820-45419947)
chr7 (264-391)||(2354641-2354770)
chr7 (264-370)||(11645930-11646036)
chr7 (259-391)||(35124720-35124853)
chr7 (264-380)||(46264272-46264389)
chr7 (264-381)||(30991459-30991578)
chr7 (264-393)||(4681573-4681699)
chr7 (264-391)||(48641417-48641546)
chr7 (264-391)||(16671246-16671375)
chr7 (264-391)||(17645614-17645743)
chr7 (256-347)||(32278158-32278249)
chr7 (264-390)||(34837442-34837568)
chr7 (267-390)||(2853195-2853320)
chr7 (258-354)||(9142148-9142244)
chr7 (264-342)||(11646627-11646705)
chr7 (264-370)||(21128040-21128146)
chr7 (296-380)||(43059223-43059308)
chr7 (285-393)||(1566482-1566593)
chr7 (264-391)||(4454924-4455052)
chr7 (287-391)||(16362667-16362772)
chr7 (293-369)||(40686892-40686967)
chr7 (264-331)||(23591237-23591304)
chr7 (264-317)||(34837388-34837441)
chr7 (341-391)||(9395804-9395855)
chr7 (264-310)||(34837655-34837701)
chr7 (264-321)||(6249840-6249897)
chr7 (343-391)||(6249896-6249945)
chr7 (264-313)||(46264086-46264135)
chr7 (365-393)||(4455240-4455268)
chr7 (221-261)||(5194286-5194326)
chr7 (221-261)||(5810979-5811019)
chr7 (221-261)||(24001067-24001107)
chr7 (221-261)||(26898457-26898497)
chr7 (221-261)||(27535286-27535326)
chr7 (221-261)||(31408688-31408728)
chr7 (221-261)||(40236924-40236964)
chr7 (221-261)||(41861679-41861719)
chr7 (221-261)||(42538486-42538526)
chr7 (221-261)||(43317448-43317488)
chr7 (221-261)||(44326183-44326223)
[»] chr6 (39 HSPs)
chr6 (260-391)||(9828915-9829047)
chr6 (264-391)||(25068188-25068317)
chr6 (264-393)||(4811037-4811168)
chr6 (264-393)||(17202850-17202980)
chr6 (264-386)||(17906784-17906906)
chr6 (264-391)||(25067962-25068090)
chr6 (264-390)||(17201597-17201724)
chr6 (264-390)||(23610432-23610559)
chr6 (264-390)||(27579598-27579725)
chr6 (264-390)||(4100293-4100424)
chr6 (259-397)||(808467-808605)
chr6 (260-390)||(27315283-27315413)
chr6 (264-393)||(17199986-17200115)
chr6 (264-390)||(808829-808958)
chr6 (264-386)||(23622218-23622341)
chr6 (264-393)||(32208383-32208513)
chr6 (295-390)||(17202661-17202758)
chr6 (264-391)||(26832494-26832622)
chr6 (264-391)||(15130899-15131029)
chr6 (264-393)||(29201558-29201676)
chr6 (264-393)||(17080035-17080166)
chr6 (285-390)||(23902528-23902634)
chr6 (264-390)||(808693-808811)
chr6 (285-340)||(17011130-17011185)
chr6 (266-328)||(1393582-1393644)
chr6 (264-310)||(4125709-4125755)
chr6 (266-352)||(8685155-8685236)
chr6 (266-352)||(8674476-8674557)
chr6 (307-368)||(32208573-32208634)
chr6 (265-313)||(17011026-17011074)
chr6 (221-261)||(27441547-27441587)
chr6 (264-311)||(19121169-19121216)
chr6 (264-310)||(17010917-17010963)
chr6 (260-310)||(33482438-33482488)
chr6 (221-261)||(9698388-9698428)
chr6 (264-308)||(25068140-25068184)
chr6 (221-261)||(26466804-26466844)
chr6 (221-261)||(26670064-26670104)
chr6 (221-261)||(31109277-31109317)
[»] chr4 (67 HSPs)
chr4 (264-391)||(48076190-48076318)
chr4 (264-391)||(23952483-23952610)
chr4 (264-393)||(36639172-36639302)
chr4 (267-391)||(48076371-48076496)
chr4 (260-390)||(4941674-4941805)
chr4 (264-391)||(23952758-23952886)
chr4 (264-391)||(54653627-54653755)
chr4 (260-393)||(2177260-2177394)
chr4 (264-391)||(47768952-47769081)
chr4 (257-391)||(2481629-2481761)
chr4 (264-391)||(22292898-22293025)
chr4 (264-390)||(53144824-53144951)
chr4 (264-391)||(7821303-7821431)
chr4 (264-391)||(28379740-28379867)
chr4 (260-391)||(52689596-52689728)
chr4 (264-391)||(21585535-21585662)
chr4 (264-390)||(24049565-24049692)
chr4 (264-390)||(43161719-43161846)
chr4 (264-391)||(7796785-7796913)
chr4 (264-381)||(48076545-48076664)
chr4 (267-366)||(44500675-44500774)
chr4 (264-393)||(12796096-12796226)
chr4 (264-391)||(7821519-7821647)
chr4 (264-393)||(29967179-29967310)
chr4 (275-391)||(8118608-8118725)
chr4 (264-391)||(8397720-8397848)
chr4 (264-387)||(36639345-36639469)
chr4 (264-391)||(47631360-47631488)
chr4 (264-391)||(8118383-8118510)
chr4 (259-370)||(28389771-28389882)
chr4 (264-389)||(7809348-7809474)
chr4 (295-391)||(21581253-21581351)
chr4 (274-391)||(22292701-22292819)
chr4 (264-393)||(28813225-28813355)
chr4 (264-393)||(28379956-28380077)
chr4 (264-370)||(32010682-32010789)
chr4 (289-393)||(43161898-43162006)
chr4 (306-391)||(8479122-8479206)
chr4 (264-391)||(47631539-47631667)
chr4 (272-390)||(47428394-47428513)
chr4 (293-386)||(7809561-7809655)
chr4 (259-391)||(8079013-8079146)
chr4 (296-370)||(8079327-8079401)
chr4 (267-335)||(15456295-15456363)
chr4 (267-335)||(15463679-15463747)
chr4 (264-322)||(24046065-24046123)
chr4 (318-391)||(24049337-24049411)
chr4 (269-367)||(8078897-8078997)
chr4 (258-393)||(7526420-7526556)
chr4 (327-391)||(41852121-41852188)
chr4 (264-313)||(2526941-2526990)
chr4 (264-309)||(23952613-23952658)
chr4 (264-309)||(23952661-23952706)
chr4 (264-310)||(8079456-8079502)
chr4 (221-261)||(711965-712005)
chr4 (221-261)||(1771321-1771361)
chr4 (221-261)||(3756301-3756341)
chr4 (221-261)||(28988478-28988518)
chr4 (264-320)||(18002111-18002170)
chr4 (264-313)||(47428298-47428347)
chr4 (221-261)||(960925-960965)
chr4 (221-261)||(17619207-17619247)
chr4 (221-261)||(32728362-32728402)
chr4 (221-261)||(41878411-41878451)
chr4 (221-261)||(43514741-43514781)
chr4 (221-261)||(46827761-46827801)
chr4 (221-261)||(55966401-55966441)
[»] chr1 (64 HSPs)
chr1 (264-393)||(51113906-51114036)
chr1 (264-393)||(27296162-27296291)
chr1 (264-391)||(318555-318683)
chr1 (264-391)||(1156043-1156171)
chr1 (264-391)||(44263089-44263217)
chr1 (264-391)||(5428528-5428655)
chr1 (264-391)||(42492142-42492271)
chr1 (260-385)||(44262660-44262785)
chr1 (264-381)||(51114090-51114208)
chr1 (264-390)||(38684015-38684142)
chr1 (264-391)||(16165663-16165792)
chr1 (264-391)||(51113723-51113852)
chr1 (264-391)||(27296337-27296465)
chr1 (260-390)||(21617752-21617883)
chr1 (264-391)||(42497267-42497397)
chr1 (264-391)||(3227200-3227328)
chr1 (264-391)||(52740700-52740829)
chr1 (264-368)||(42496935-42497039)
chr1 (264-390)||(1647543-1647670)
chr1 (265-391)||(4100565-4100691)
chr1 (264-390)||(44263310-44263437)
chr1 (264-376)||(5428933-5429046)
chr1 (259-391)||(5429043-5429180)
chr1 (268-391)||(6537629-6537757)
chr1 (266-391)||(28950148-28950274)
chr1 (264-391)||(18912327-18912456)
chr1 (264-352)||(28950277-28950365)
chr1 (264-390)||(42497448-42497574)
chr1 (264-370)||(51272492-51272598)
chr1 (266-386)||(28949875-28949995)
chr1 (272-390)||(4100771-4100890)
chr1 (293-391)||(44099650-44099747)
chr1 (264-391)||(30083978-30084107)
chr1 (263-370)||(18912214-18912322)
chr1 (264-355)||(33375630-33375721)
chr1 (272-390)||(24595066-24595187)
chr1 (264-370)||(42497111-42497217)
chr1 (296-393)||(52584966-52585064)
chr1 (264-341)||(28950016-28950093)
chr1 (315-391)||(45417578-45417655)
chr1 (318-393)||(12115359-12115435)
chr1 (291-357)||(24595255-24595321)
chr1 (264-391)||(43761946-43762075)
chr1 (264-335)||(6537465-6537536)
chr1 (264-319)||(42492280-42492335)
chr1 (268-310)||(45417699-45417741)
chr1 (342-391)||(47790726-47790778)
chr1 (259-304)||(47790691-47790736)
chr1 (264-313)||(48552883-48552932)
chr1 (264-313)||(48552992-48553041)
chr1 (221-261)||(14427352-14427392)
chr1 (221-261)||(35003299-35003339)
chr1 (221-261)||(44112682-44112722)
chr1 (221-261)||(48119633-48119673)
chr1 (293-352)||(48411972-48412031)
chr1 (342-386)||(11928235-11928277)
chr1 (264-316)||(52584880-52584930)
chr1 (221-261)||(5489781-5489821)
chr1 (363-391)||(24595313-24595341)
chr1 (221-261)||(38113250-38113290)
chr1 (221-261)||(38335923-38335963)
chr1 (221-261)||(41065158-41065198)
chr1 (221-261)||(43571141-43571181)
chr1 (264-304)||(52740915-52740955)
[»] chr3 (55 HSPs)
chr3 (264-391)||(46451470-46451598)
chr3 (264-391)||(47503031-47503159)
chr3 (260-390)||(53047567-53047697)
chr3 (264-393)||(18094956-18095086)
chr3 (264-391)||(837181-837309)
chr3 (264-391)||(36643105-36643233)
chr3 (266-387)||(43017273-43017396)
chr3 (264-390)||(38887343-38887471)
chr3 (261-391)||(35560098-35560230)
chr3 (259-393)||(11454200-11454335)
chr3 (264-393)||(18094741-18094871)
chr3 (264-379)||(11454562-11454679)
chr3 (268-391)||(37760501-37760625)
chr3 (264-391)||(40050850-40050977)
chr3 (264-391)||(20877194-20877322)
chr3 (264-391)||(38887556-38887686)
chr3 (264-391)||(47503204-47503333)
chr3 (264-370)||(45514419-45514524)
chr3 (264-391)||(11454381-11454512)
chr3 (293-391)||(47519955-47520054)
chr3 (264-370)||(16015250-16015356)
chr3 (266-390)||(43819330-43819455)
chr3 (301-391)||(46451320-46451412)
chr3 (268-353)||(47519871-47519956)
chr3 (264-359)||(38887806-38887901)
chr3 (265-391)||(21968986-21969111)
chr3 (265-391)||(21991422-21991547)
chr3 (264-379)||(11453937-11454054)
chr3 (293-370)||(24365763-24365840)
chr3 (264-391)||(11522532-11522662)
chr3 (267-393)||(11220780-11220906)
chr3 (264-370)||(46451078-46451181)
chr3 (300-393)||(52300747-52300841)
chr3 (264-368)||(850932-851036)
chr3 (294-358)||(51654074-51654138)
chr3 (264-391)||(3847825-3847945)
chr3 (338-386)||(851039-851088)
chr3 (264-386)||(25917426-25917546)
chr3 (264-311)||(46451252-46451299)
chr3 (319-356)||(54274787-54274824)
chr3 (221-261)||(4190320-4190360)
chr3 (260-368)||(17755732-17755840)
chr3 (260-368)||(19057052-19057160)
chr3 (221-261)||(25413686-25413726)
chr3 (221-261)||(54246203-54246243)
chr3 (338-391)||(54274725-54274779)
chr3 (221-261)||(9434129-9434169)
chr3 (221-261)||(10457947-10457987)
chr3 (221-261)||(36150135-36150175)
chr3 (221-261)||(40480754-40480794)
chr3 (221-261)||(42100693-42100733)
chr3 (221-261)||(45126983-45127023)
chr3 (221-261)||(47191080-47191120)
chr3 (221-261)||(53581913-53581953)
chr3 (221-261)||(54237101-54237141)
[»] chr2 (58 HSPs)
chr2 (264-391)||(28612211-28612339)
chr2 (264-391)||(28611786-28611914)
chr2 (260-391)||(41995731-41995863)
chr2 (260-390)||(44256469-44256600)
chr2 (264-391)||(10129475-10129603)
chr2 (264-390)||(6348072-6348199)
chr2 (259-391)||(37131466-37131598)
chr2 (292-391)||(5001677-5001777)
chr2 (264-393)||(28612633-28612761)
chr2 (264-391)||(11735910-11736037)
chr2 (264-391)||(28612846-28612975)
chr2 (264-391)||(28611999-28612127)
chr2 (264-390)||(29550133-29550265)
chr2 (288-390)||(11736325-11736428)
chr2 (264-391)||(3249777-3249905)
chr2 (264-391)||(5001499-5001627)
chr2 (264-391)||(28612424-28612551)
chr2 (267-390)||(41326372-41326496)
chr2 (264-368)||(44543717-44543821)
chr2 (264-355)||(627537-627628)
chr2 (264-370)||(12898023-12898129)
chr2 (266-391)||(29549960-29550086)
chr2 (265-358)||(5013208-5013301)
chr2 (264-368)||(44543928-44544032)
chr2 (264-390)||(3249561-3249688)
chr2 (302-391)||(5001352-5001442)
chr2 (302-391)||(5013022-5013112)
chr2 (264-391)||(29549791-29549919)
chr2 (317-393)||(627629-627706)
chr2 (286-391)||(11657474-11657576)
chr2 (264-386)||(12896407-12896532)
chr2 (306-391)||(6347935-6348020)
chr2 (327-391)||(20708899-20708964)
chr2 (285-371)||(19640327-19640414)
chr2 (285-371)||(19838920-19839007)
chr2 (338-391)||(44543660-44543714)
chr2 (264-335)||(2132238-2132309)
chr2 (221-261)||(966889-966929)
chr2 (221-261)||(1750419-1750459)
chr2 (221-261)||(11825709-11825749)
chr2 (221-261)||(16803973-16804013)
chr2 (221-261)||(16843255-16843295)
chr2 (221-261)||(18491710-18491750)
chr2 (221-261)||(41282029-41282069)
chr2 (221-261)||(43114562-43114602)
chr2 (264-386)||(17930465-17930585)
chr2 (223-261)||(7070421-7070459)
chr2 (342-386)||(15256548-15256590)
chr2 (295-336)||(17370109-17370150)
chr2 (264-320)||(20641641-20641700)
chr2 (221-261)||(4299475-4299515)
chr2 (365-393)||(11736228-11736256)
chr2 (221-261)||(12302308-12302348)
chr2 (221-261)||(12415515-12415555)
chr2 (221-261)||(12427575-12427615)
chr2 (221-261)||(16096752-16096792)
chr2 (221-261)||(34817831-34817871)
chr2 (221-261)||(43490456-43490496)
[»] chr8 (65 HSPs)
chr8 (264-391)||(1197878-1198005)
chr8 (267-391)||(27853648-27853773)
chr8 (264-370)||(23828127-23828233)
chr8 (262-391)||(23838321-23838451)
chr8 (264-391)||(3459113-3459241)
chr8 (259-391)||(23085855-23085989)
chr8 (264-391)||(29580017-29580144)
chr8 (260-391)||(23960778-23960909)
chr8 (264-390)||(32062815-32062945)
chr8 (264-391)||(37198276-37198404)
chr8 (264-391)||(33198833-33198960)
chr8 (264-391)||(35617681-35617811)
chr8 (264-390)||(37410051-37410178)
chr8 (266-391)||(39922066-39922192)
chr8 (259-391)||(40399472-40399605)
chr8 (292-391)||(38111372-38111472)
chr8 (264-391)||(44429050-44429177)
chr8 (264-370)||(23830945-23831051)
chr8 (264-391)||(23960560-23960687)
chr8 (292-391)||(34947504-34947603)
chr8 (264-391)||(30439021-30439151)
chr8 (264-391)||(37197884-37198018)
chr8 (264-370)||(37198113-37198220)
chr8 (264-386)||(37197662-37197783)
chr8 (264-391)||(13797442-13797570)
chr8 (264-391)||(2084876-2085005)
chr8 (260-370)||(37426112-37426222)
chr8 (264-391)||(44433629-44433757)
chr8 (264-393)||(44429894-44430024)
chr8 (272-390)||(42045644-42045764)
chr8 (272-357)||(18308258-18308343)
chr8 (258-368)||(43419032-43419138)
chr8 (264-330)||(23838176-23838242)
chr8 (264-391)||(33198603-33198729)
chr8 (264-393)||(604652-604781)
chr8 (264-391)||(44430067-44430196)
chr8 (264-391)||(44430418-44430547)
chr8 (264-391)||(44433802-44433931)
chr8 (343-391)||(44014524-44014572)
chr8 (267-386)||(604485-604606)
chr8 (319-391)||(1276501-1276574)
chr8 (303-391)||(3990184-3990273)
chr8 (264-391)||(44429224-44429353)
chr8 (264-391)||(44433976-44434105)
chr8 (264-320)||(39921960-39922016)
chr8 (264-310)||(37197788-37197834)
chr8 (264-391)||(44430241-44430370)
chr8 (259-313)||(34345139-34345193)
chr8 (264-310)||(39922226-39922272)
chr8 (264-322)||(44434153-44434211)
chr8 (333-391)||(38111190-38111249)
chr8 (342-391)||(604825-604875)
chr8 (221-261)||(30912617-30912657)
chr8 (221-261)||(35181521-35181561)
chr8 (221-261)||(42699262-42699302)
chr8 (343-393)||(604969-605020)
chr8 (264-353)||(604344-604434)
chr8 (332-393)||(23831131-23831193)
chr8 (221-261)||(11582771-11582811)
chr8 (221-261)||(20148765-20148805)
chr8 (221-261)||(29705367-29705407)
chr8 (221-261)||(33630048-33630088)
chr8 (221-261)||(34304793-34304833)
chr8 (221-261)||(36743538-36743578)
chr8 (221-261)||(42295200-42295240)
[»] chr5 (54 HSPs)
chr5 (263-393)||(12442128-12442259)
chr5 (264-391)||(11313979-11314108)
chr5 (264-391)||(35159704-35159831)
chr5 (259-391)||(7127554-7127687)
chr5 (260-393)||(7673193-7673329)
chr5 (264-391)||(16528600-16528728)
chr5 (264-391)||(26523137-26523265)
chr5 (264-391)||(43394931-43395058)
chr5 (256-393)||(19121899-19122037)
chr5 (269-391)||(11313807-11313930)
chr5 (264-390)||(24351450-24351577)
chr5 (264-391)||(31487062-31487189)
chr5 (264-370)||(16529135-16529241)
chr5 (276-391)||(16528793-16528909)
chr5 (264-393)||(16528959-16529087)
chr5 (260-390)||(35159415-35159545)
chr5 (264-391)||(11313640-11313770)
chr5 (256-391)||(19122235-19122371)
chr5 (264-390)||(41093047-41093175)
chr5 (287-390)||(24350897-24351001)
chr5 (264-370)||(9488069-9488175)
chr5 (264-393)||(10409525-10409655)
chr5 (262-391)||(31486813-31486943)
chr5 (264-391)||(41092869-41092995)
chr5 (264-391)||(14166159-14166289)
chr5 (264-370)||(16526197-16526304)
chr5 (264-391)||(23138032-23138161)
chr5 (264-393)||(13105150-13105284)
chr5 (264-357)||(26523268-26523361)
chr5 (264-391)||(13035177-13035309)
chr5 (293-391)||(43395106-43395207)
chr5 (264-393)||(16305348-16305476)
chr5 (285-348)||(24326546-24326609)
chr5 (285-348)||(24350732-24350795)
chr5 (285-348)||(24351286-24351349)
chr5 (291-393)||(38004643-38004744)
chr5 (264-391)||(26523413-26523542)
chr5 (264-309)||(7673100-7673145)
chr5 (264-311)||(38109886-38109933)
chr5 (343-393)||(38109946-38109997)
chr5 (264-313)||(22431585-22431634)
chr5 (221-261)||(33855098-33855138)
chr5 (264-308)||(38268880-38268924)
chr5 (350-391)||(24271122-24271164)
chr5 (350-391)||(24325983-24326025)
chr5 (350-391)||(24347744-24347786)
chr5 (221-261)||(2614704-2614744)
chr5 (221-261)||(7617138-7617178)
chr5 (365-393)||(14165946-14165974)
chr5 (221-261)||(18033987-18034027)
chr5 (221-261)||(22512310-22512350)
chr5 (221-261)||(25915042-25915082)
chr5 (221-261)||(32473449-32473489)
chr5 (221-261)||(41334718-41334758)
[»] scaffold0018 (2 HSPs)
scaffold0018 (264-387)||(163784-163908)
scaffold0018 (267-309)||(163228-163270)
[»] scaffold0504 (1 HSPs)
scaffold0504 (264-377)||(1526-1640)
[»] scaffold0013 (1 HSPs)
scaffold0013 (260-391)||(102701-102831)
[»] scaffold0240 (2 HSPs)
scaffold0240 (264-393)||(13092-13224)
scaffold0240 (298-391)||(13285-13379)
[»] scaffold0294 (1 HSPs)
scaffold0294 (259-367)||(12386-12496)
[»] scaffold0320 (1 HSPs)
scaffold0320 (258-387)||(14562-14692)
[»] scaffold0001 (1 HSPs)
scaffold0001 (264-388)||(196680-196803)
[»] scaffold0097 (1 HSPs)
scaffold0097 (327-391)||(12735-12800)
[»] scaffold1155 (2 HSPs)
scaffold1155 (343-391)||(1104-1152)
scaffold1155 (296-356)||(958-1018)
[»] scaffold0105 (2 HSPs)
scaffold0105 (343-391)||(29867-29915)
scaffold0105 (296-356)||(29721-29781)
[»] scaffold0345 (2 HSPs)
scaffold0345 (343-391)||(9064-9113)
scaffold0345 (296-356)||(9199-9259)
[»] scaffold0003 (1 HSPs)
scaffold0003 (221-261)||(45774-45814)
[»] scaffold0432 (1 HSPs)
scaffold0432 (264-309)||(5370-5415)
[»] scaffold0318 (1 HSPs)
scaffold0318 (264-313)||(5996-6045)
[»] scaffold0385 (1 HSPs)
scaffold0385 (221-261)||(11256-11296)
[»] scaffold0187 (2 HSPs)
scaffold0187 (221-261)||(14243-14283)
scaffold0187 (221-261)||(24571-24611)
[»] scaffold0119 (1 HSPs)
scaffold0119 (221-261)||(690-730)


Alignment Details
Target: chr7 (Bit Score: 119; Significance: 1e-60; HSPs: 66)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 119; E-Value: 1e-60
Query Start/End: Original strand, 264 - 390
Target Start/End: Complemental strand, 4681001 - 4680875
Alignment:
Q  264 ttatttattaattttgttacctctgcagcaatttaacctaattttttcccgctcatttgctttattatgtttgcaattatttaacctaacaaattccatc 363  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  4681001 ttatttattaattttgttacgtctgcagcaatttaacctaattttttcccgctcatttgctttattaggtttgcaattatttaacctaacaaattccatc 4680902  T
Q  364 taaaaaatgcatcgcaccaatttcatt 390  Q
    |||||||||||||||||||||||||||    
T  4680901 taaaaaatgcatcgcaccaatttcatt 4680875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 108; E-Value: 4e-54
Query Start/End: Original strand, 264 - 391
Target Start/End: Complemental strand, 11650113 - 11649986
Alignment:
Q  264 ttatttattaattttgttacctctgcagcaatttaacctaattttttcccgctcatttgctttattatgtttgcaattatttaacctaacaaattccatc 363  Q
    |||||||||||||||||||  |||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  11650113 ttatttattaattttgttaggtctgcaacaatttaacctaattttttcccgctcatttgctttattaggtttgcaattatttaacctaacaaattccatc 11650014  T
Q  364 taaaaaatgcatcgcaccaatttcattc 391  Q
    ||||||||||||| ||||||||||||||    
T  11650013 taaaaaatgcatcacaccaatttcattc 11649986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 264 - 391
Target Start/End: Complemental strand, 23591519 - 23591391
Alignment:
Q  264 ttatttattaattttgttacctctgcagcaatttaacctaattttttcccgctcatttgctttattatgtttgcaattatttaacctaacaaattccatc 363  Q
    |||||||||||||||||||  |||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  23591519 ttatttattaattttgttagatctgcaacaatttaacctaattttttcccgctcatttgctttattaggtttgcaattatttaacctaacaaattccatc 23591420  T
Q  364 taa-aaaatgcatcgcaccaatttcattc 391  Q
    ||| |||||||||||||||||||||||||    
T  23591419 taaaaaaatgcatcgcaccaatttcattc 23591391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 103; E-Value: 4e-51
Query Start/End: Original strand, 258 - 391
Target Start/End: Complemental strand, 12140972 - 12140838
Alignment:
Q  258 acatctttatttattaattttgttacctctgcagcaatttaacctaattttttcccgctcatttgctttattatgtttgcaattatttaacctaacaaat 357  Q
    ||||| |||||||||||||||||||| |||||||||||||||||||||||||| |||||||||||| |||||| ||||||||||||||||||||||||||    
T  12140972 acatccttatttattaattttgttacgtctgcagcaatttaacctaatttttttccgctcatttgcgttattaggtttgcaattatttaacctaacaaat 12140873  T
Q  358 tccatctaaaa-aatgcatcgcaccaatttcattc 391  Q
    | ||||||||| |||||||||||||||||||||||    
T  12140872 ttcatctaaaagaatgcatcgcaccaatttcattc 12140838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 98; E-Value: 4e-48
Query Start/End: Original strand, 263 - 391
Target Start/End: Original strand, 16671604 - 16671733
Alignment:
Q  263 tttatttattaattttgttacctctgcagcaatttaacctaattttttcccgctcatttgctttattatgtttgcaattatttaacctaacaaattccat 362  Q
    ||||||| || |||||||||  ||||||||||| |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  16671604 tttatttttttattttgttaggtctgcagcaatataacctaattttttcccgctcatttgctttattaggtttgcaattatttaacctaacaaattccat 16671703  T
Q  363 ct-aaaaaatgcatcgcaccaatttcattc 391  Q
    || |||||||||||||||||||||||||||    
T  16671704 ctaaaaaaatgcatcgcaccaatttcattc 16671733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 98; E-Value: 4e-48
Query Start/End: Original strand, 263 - 391
Target Start/End: Original strand, 17645972 - 17646101
Alignment:
Q  263 tttatttattaattttgttacctctgcagcaatttaacctaattttttcccgctcatttgctttattatgtttgcaattatttaacctaacaaattccat 362  Q
    ||||||| || |||||||||  ||||||||||| |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  17645972 tttatttttttattttgttaggtctgcagcaatataacctaattttttcccgctcatttgctttattaggtttgcaattatttaacctaacaaattccat 17646071  T
Q  363 ct-aaaaaatgcatcgcaccaatttcattc 391  Q
    || |||||||||||||||||||||||||||    
T  17646072 ctaaaaaaatgcatcgcaccaatttcattc 17646101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 96; E-Value: 6e-47
Query Start/End: Original strand, 266 - 393
Target Start/End: Complemental strand, 11646312 - 11646185
Alignment:
Q  266 atttattaattttgttacctctgcagcaatttaacctaattttttcccgctcatttgctttattatgtttgcaattatttaacctaacaaattccatcta 365  Q
    |||||||||||||||||  |||||||||| ||||||||||||||| || |||||||||||| ||| ||||||||||||||||||||||||||||| ||||    
T  11646312 atttattaattttgttatgtctgcagcaacttaacctaatttttttccactcatttgctttgttaggtttgcaattatttaacctaacaaattccgtcta 11646213  T
Q  366 aaaaatgcatcgcaccaatttcattcat 393  Q
    ||||||||||||||||||||||||||||    
T  11646212 aaaaatgcatcgcaccaatttcattcat 11646185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 264 - 391
Target Start/End: Complemental strand, 9142066 - 9141937
Alignment:
Q  264 ttatttattaattttgttacctctgcagcaatttaacctaattttttcccgctcatttgctttattatgtttgcaattatttaacctaacaaattccatc 363  Q
    |||||||||||||||||||  |||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||| ||||    
T  9142066 ttatttattaattttgttatgtctgcagcaatttaacctaattttttcctgctcatttgctttattaggtttgcaattatttaacctaacaaatttcatc 9141967  T
Q  364 taa--aaaatgcatcgcaccaatttcattc 391  Q
    |||  ||||||||| |||||||||||||||    
T  9141966 taaaaaaaatgcattgcaccaatttcattc 9141937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 264 - 390
Target Start/End: Complemental strand, 22774015 - 22773890
Alignment:
Q  264 ttatttattaattttgttacctctgcagcaatttaacctaattttttcccgctcatttgctttattatgtttgcaattatttaacctaacaaattccatc 363  Q
    |||||||||||||||||||| |||||| |||||||||||||||||| ||||||||||||||||| ||||||||||||||||||| |||||||||| ||||    
T  22774015 ttatttattaattttgttacgtctgcaacaatttaacctaattttt-cccgctcatttgctttactatgtttgcaattatttaatctaacaaatttcatc 22773917  T
Q  364 taaaaaatgcatcgcaccaatttcatt 390  Q
    ||||||| |||||||||||||||||||    
T  22773916 taaaaaacgcatcgcaccaatttcatt 22773890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 264 - 391
Target Start/End: Complemental strand, 48640906 - 48640777
Alignment:
Q  264 ttatttattaattttgttacctctgcagcaatttaacctaattttttcccgctcatttgctttattatgtttgcaattatttaacctaacaaattccatc 363  Q
    ||||||||||||||||| |  ||||||||||||||||||||||| |||||||||||||||||||||| ||||||||||||||||||||||||||| ||||    
T  48640906 ttatttattaattttgtaaggtctgcagcaatttaacctaatttcttcccgctcatttgctttattaggtttgcaattatttaacctaacaaatttcatc 48640807  T
Q  364 taa--aaaatgcatcgcaccaatttcattc 391  Q
    |||  |||||||||||||||||||||||||    
T  48640806 taaaaaaaatgcatcgcaccaatttcattc 48640777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 93; E-Value: 4e-45
Query Start/End: Original strand, 264 - 390
Target Start/End: Complemental strand, 2527059 - 2526931
Alignment:
Q  264 ttatttattaattttgttacctctgcagcaatttaacctaatttttt-cccgctcatttgctttattatgtttgcaattatttaacctaacaaattccat 362  Q
    |||||||||||||||||||  |||||||||||||||||||||||||| |||||||||||||||||||| |||||||||||||||||||||| |||| |||    
T  2527059 ttatttattaattttgttaggtctgcagcaatttaacctaatttttttcccgctcatttgctttattaggtttgcaattatttaacctaactaattacat 2526960  T
Q  363 ctaa-aaaatgcatcgcaccaatttcatt 390  Q
    |||| ||||||||||||||||||||||||    
T  2526959 ctaaaaaaatgcatcgcaccaatttcatt 2526931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 93; E-Value: 4e-45
Query Start/End: Original strand, 264 - 391
Target Start/End: Complemental strand, 11646502 - 11646374
Alignment:
Q  264 ttatttattaattttgttacctctgcagcaatttaacctaattttttcccgctcatttgctttattatgtttgcaattatttaacctaacaaattccatc 363  Q
    |||||||||||||||||||| |||||||||| |||| |||||||||| ||||||||||||||||||| |||||||||||||||||||||||||||||||     
T  11646502 ttatttattaattttgttacgtctgcagcaacttaatctaatttttttccgctcatttgctttattaggtttgcaattatttaacctaacaaattccata 11646403  T
Q  364 t-aaaaaatgcatcgcaccaatttcattc 391  Q
    | ||||||||||| |||||||||||||||    
T  11646402 taaaaaaatgcatagcaccaatttcattc 11646374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 93; E-Value: 4e-45
Query Start/End: Original strand, 264 - 391
Target Start/End: Original strand, 18486634 - 18486762
Alignment:
Q  264 ttatttattaattttgttacctctgcagcaatttaacctaattttttcccgctcatttgctttattatgtttgcaattatttaacctaacaaattccatc 363  Q
    |||||||||||||||||||  | |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| ||||    
T  18486634 ttatttattaattttgttaggtttgcagcaatttaacctaattttttcccgctcatttgctttattaggtttgcaattatttaacctaacaaatttcatc 18486733  T
Q  364 t-aaaaaatgcatcgcaccaatttcattc 391  Q
    | ||||||||||||  |||||||||||||    
T  18486734 taaaaaaatgcatcataccaatttcattc 18486762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 91; E-Value: 6e-44
Query Start/End: Original strand, 264 - 393
Target Start/End: Complemental strand, 16492649 - 16492520
Alignment:
Q  264 ttatttattaattttgttacctctgcagcaatttaacctaattttttcccgctcatttgctttattatgtttgcaattatttaacctaacaaattccatc 363  Q
    |||||||||||||||||||  |||||||||||||||| || |||||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  16492649 ttatttattaattttgttaggtctgcagcaatttaacttatttttttcc-gctcatttgctttattatgtttgcaattatttaacctaacaaatttcatc 16492551  T
Q  364 taaaaaa-tgcatcgcaccaatttcattcat 393  Q
    ||||||| |||||||||| ||||||||||||    
T  16492550 taaaaaagtgcatcgcactaatttcattcat 16492520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 89; E-Value: 9e-43
Query Start/End: Original strand, 260 - 391
Target Start/End: Original strand, 22324280 - 22324412
Alignment:
Q  260 atctttatttattaattttgttacctctgcagcaatttaacctaattttttcccgctcatttgctttattatgtttgcaattatttaacctaacaaattc 359  Q
    |||||||||||||||||||||||  |||||||||||||||||||||| |||||||||||||| |||| ||| ||||| ||||||| |||||||||||||     
T  22324280 atctttatttattaattttgttaggtctgcagcaatttaacctaattgtttcccgctcatttacttttttaggtttgtaattattcaacctaacaaattt 22324379  T
Q  360 catct-aaaaaatgcatcgcaccaatttcattc 391  Q
    ||||| |||||||||||||||||||||||||||    
T  22324380 catctaaaaaaatgcatcgcaccaatttcattc 22324412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 89; E-Value: 9e-43
Query Start/End: Original strand, 264 - 391
Target Start/End: Complemental strand, 27716636 - 27716508
Alignment:
Q  264 ttatttattaattttgttacctctgcagcaatttaacctaattttttcccgctcatttgctttattatgtttgcaattatttaacctaacaaattccatc 363  Q
    |||||||||||||||||||  | | |||||||||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||||| |||||||    
T  27716636 ttatttattaattttgttaggttttcagcaatttaacctaattttatcccgctcatttgctttattaggtttgcaattatttaacctaacaacttccatc 27716537  T
Q  364 taa-aaaatgcatcgcaccaatttcattc 391  Q
    ||| |||||||||||||||||||| ||||    
T  27716536 taaaaaaatgcatcgcaccaatttgattc 27716508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 264 - 390
Target Start/End: Complemental strand, 45419741 - 45419614
Alignment:
Q  264 ttatttattaattttgttacctctgcagcaatttaacctaattttttcccgctcatttgctttattatgtttgcaattatttaacctaacaaattccatc 363  Q
    |||||||||||||||||||  ||||||| ||||||||||||||||||   ||||||||||||||||| ||||||||||||||||||||||||||| ||||    
T  45419741 ttatttattaattttgttaggtctgcagtaatttaacctaatttttttaagctcatttgctttattaggtttgcaattatttaacctaacaaatttcatc 45419642  T
Q  364 taaaaa-atgcatcgcaccaatttcatt 390  Q
    |||||| |||||||||||||||||||||    
T  45419641 taaaaagatgcatcgcaccaatttcatt 45419614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 264 - 393
Target Start/End: Complemental strand, 48641121 - 48640991
Alignment:
Q  264 ttatttattaattttgttacctctgcagcaatttaacctaattttttcccgctcatttgctttattatgtttgcaattatttaacctaacaaattccatc 363  Q
    |||||||||||||||||||  |||| ||||||||||| || |||||||||||||||||||||||||| |||||||||||||||||| || ||||| ||||    
T  48641121 ttatttattaattttgttaggtctgtagcaatttaacatagttttttcccgctcatttgctttattaggtttgcaattatttaaccaaaaaaatttcatc 48641022  T
Q  364 taa-aaaatgcatcgcaccaatttcattcat 393  Q
    ||| |||||||||||||||||||||||||||    
T  48641021 taaaaaaatgcatcgcaccaatttcattcat 48640991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 86; E-Value: 5e-41
Query Start/End: Original strand, 264 - 389
Target Start/End: Original strand, 34837187 - 34837315
Alignment:
Q  264 ttatttattaattttgttacctctgcagcaatttaacctaattttttc-ccgctcatttgctttattatgtttgcaattatttaacctaacaaattccat 362  Q
    |||||||||||||||||||  ||||||||||||||||||||||||||  ||||| ||||||||||||| |||| ||||||||||||||||||||||||||    
T  34837187 ttatttattaattttgttaggtctgcagcaatttaacctaattttttttccgcttatttgctttattaggtttacaattatttaacctaacaaattccat 34837286  T
Q  363 ct--aaaaaatgcatcgcaccaatttcat 389  Q
    ||  |||||||||||||||||||||||||    
T  34837287 ctaaaaaaaatgcatcgcaccaatttcat 34837315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 264 - 390
Target Start/End: Original strand, 19222105 - 19222233
Alignment:
Q  264 ttatttattaattttgttacctctgcagcaatttaacctaattttttc-ccgctcatttgctttattatgtttgcaattatttaacctaacaaattccat 362  Q
    |||||||||||||||||||  ||||||||||||||||||||||||||  ||| ||||||||||||||| |||| ||||||||||||||||||||||||||    
T  19222105 ttatttattaattttgttagttctgcagcaatttaacctaattttttttccgttcatttgctttattaggtttacaattatttaacctaacaaattccat 19222204  T
Q  363 ctaaaaa-atgcatcgcaccaatttcatt 390  Q
    ||||||| ||||||| |||||||||||||    
T  19222205 ctaaaaatatgcatcacaccaatttcatt 19222233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 84; E-Value: 8e-40
Query Start/End: Original strand, 287 - 391
Target Start/End: Complemental strand, 4681227 - 4681121
Alignment:
Q  287 tgcagcaatttaacctaattttttcccgctcatttgctttattatgtttgcaattatttaacctaacaaattccatctaa--aaaatgcatcgcaccaat 384  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||  ||||| ||||||||||||    
T  4681227 tgcaacaatttaacctaattttttcccgctcatttgctttattatgtttgcaattatttaacctaataaattccatctaaaaaaaatacatcgcaccaat 4681128  T
Q  385 ttcattc 391  Q
    |||||||    
T  4681127 ttcattc 4681121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 264 - 370
Target Start/End: Complemental strand, 27716414 - 27716308
Alignment:
Q  264 ttatttattaattttgttacctctgcagcaatttaacctaattttttcccgctcatttgctttattatgtttgcaattatttaacctaacaaattccatc 363  Q
    |||||||||||||||||||  |||  |||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||||||||||    
T  27716414 ttatttattaattttgttaggtctctagcaatttaacctaattttttcccactcatttgctttattaggtttgcaattatttaacctaacaaattccatc 27716315  T
Q  364 taaaaaa 370  Q
    |||||||    
T  27716314 taaaaaa 27716308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 264 - 391
Target Start/End: Original strand, 21224138 - 21224266
Alignment:
Q  264 ttatttattaattttgttacctctgcagcaatttaacctaattttttcccgctcatttgctttattatgtttgcaattatttaacctaacaaattccatc 363  Q
    |||||||||||||||||||  |||||||||||||||||||||||||| ||||| ||||||||||||| |||| ||||||||||||||||||| || ||||    
T  21224138 ttatttattaattttgttaggtctgcagcaatttaacctaatttttttccgctaatttgctttattaggtttacaattatttaacctaacaagtttcatc 21224237  T
Q  364 t-aaaaaatgcatcgcaccaatttcattc 391  Q
    | ||||||| ||||||| |||||||||||    
T  21224238 taaaaaaatacatcgcatcaatttcattc 21224266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 264 - 391
Target Start/End: Complemental strand, 23591736 - 23591608
Alignment:
Q  264 ttatttattaattttgttacctctgcagcaatttaacctaattttttcccgctcatttgctttattatgtttgcaattatttaacctaacaaattccatc 363  Q
    |||||||||||||||| ||  | |||| ||||| || |||||||||||||  ||||||||||||||| ||||||||||||||||||||||||||||||||    
T  23591736 ttatttattaattttgctaagtgtgcaacaattgaagctaattttttccctttcatttgctttattaggtttgcaattatttaacctaacaaattccatc 23591637  T
Q  364 t-aaaaaatgcatcgcaccaatttcattc 391  Q
    | |||||||||||||||||||||||||||    
T  23591636 tgaaaaaatgcatcgcaccaatttcattc 23591608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 293 - 391
Target Start/End: Original strand, 18487180 - 18487279
Alignment:
Q  293 aatttaacctaattttttcccgctcatttgctttattatgtttgcaattatttaacctaacaaattccatct-aaaaaatgcatcgcaccaatttcattc 391  Q
    |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| ||||| |||||||||||| ||||||||||||||    
T  18487180 aatttaacctaattttttcccgctcatttgctttattaggtttgcaattatttaacctaacaaatttcatctaaaaaaatgcatcacaccaatttcattc 18487279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 257 - 391
Target Start/End: Complemental strand, 40450213 - 40450078
Alignment:
Q  257 aacatctttatttattaattttgttacctctgcagcaatttaacctaattttttcccgctcatttgctttattatgtttgcaattatttaacctaacaaa 356  Q
    |||||| |||||||||||||||||||  ||||||||||||||||||||||| |||  |||||||||||||||||  ||||||||||||||||||||||||    
T  40450213 aacatccttatttattaattttgttaggtctgcagcaatttaacctaatttattcgtgctcatttgctttattagatttgcaattatttaacctaacaaa 40450114  T
Q  357 ttccatctaaaaa-atgcatcgcaccaatttcattc 391  Q
    || | |||||||| |||||||||| |||| ||||||    
T  40450113 tttcttctaaaaatatgcatcgcaacaatatcattc 40450078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 265 - 390
Target Start/End: Complemental strand, 45419947 - 45419820
Alignment:
Q  265 tatttattaattttgttacctctgcagcaatttaacctaattttttc-ccgctcatttgctttattatgtttgcaattatttaacctaacaaattccatc 363  Q
    ||||||||||||||||||  |||||| |||| ||||||| ||||||  ||||||||||||||||||| ||||| ||||||||||||||||||||||||||    
T  45419947 tatttattaattttgttaggtctgcatcaatctaacctatttttttttccgctcatttgctttattaggtttgtaattatttaacctaacaaattccatc 45419848  T
Q  364 taa-aaaatgcatcgcaccaatttcatt 390  Q
    ||| ||||||||||||||||||||||||    
T  45419847 taaaaaaatgcatcgcaccaatttcatt 45419820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 79; E-Value: 8e-37
Query Start/End: Original strand, 264 - 391
Target Start/End: Complemental strand, 2354770 - 2354641
Alignment:
Q  264 ttatttattaattttgttacctctgcagcaatttaacctaattttttcccgctcatttgctttattatgtttgcaattatttaacctaacaaattccatc 363  Q
    |||||||||||||||||||  |||||||||||||||| |||| |||||| ||||||||||||||||| ||||||||||||||||  ||||||||||||||    
T  2354770 ttatttattaattttgttaggtctgcagcaatttaacgtaatgttttccagctcatttgctttattaggtttgcaattatttaatataacaaattccatc 2354671  T
Q  364 taa--aaaatgcatcgcaccaatttcattc 391  Q
    |||  ||||||||| |||||||||| ||||    
T  2354670 taaaaaaaatgcattgcaccaattttattc 2354641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 79; E-Value: 8e-37
Query Start/End: Original strand, 264 - 370
Target Start/End: Complemental strand, 11646036 - 11645930
Alignment:
Q  264 ttatttattaattttgttacctctgcagcaatttaacctaattttttcccgctcatttgctttattatgtttgcaattatttaacctaacaaattccatc 363  Q
    |||||||||||||||||||| |||||| ||| ||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||||||| |||     
T  11646036 ttatttattaattttgttacgtctgcaacaacttaacctaattttttcccgctcatttgctttattaggtttgtaattatttaacctaacaaatttcata 11645937  T
Q  364 taaaaaa 370  Q
    |||||||    
T  11645936 taaaaaa 11645930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 259 - 391
Target Start/End: Original strand, 35124720 - 35124853
Alignment:
Q  259 catctttatttattaattttgttacctctgcagcaatttaacctaattttttcccgctcatttgctttattatgtttgcaattatttaacctaacaaatt 358  Q
    |||| |||||||||||| ||||||  | |||| ||||||||| |||||||||  || ||||||||||||||| |||||||||||||||||||||||||||    
T  35124720 catccttatttattaatgttgttaggtttgcaacaatttaacttaattttttgtcgttcatttgctttattaggtttgcaattatttaacctaacaaatt 35124819  T
Q  359 ccatct-aaaaaatgcatcgcaccaatttcattc 391  Q
    || ||| |||||||||||||||||||||||||||    
T  35124820 ccgtctaaaaaaatgcatcgcaccaatttcattc 35124853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 264 - 380
Target Start/End: Complemental strand, 46264389 - 46264272
Alignment:
Q  264 ttatttattaattttgttacctctgcagcaatttaacctaatttttt-cccgctcatttgctttattatgtttgcaattatttaacctaacaaattccat 362  Q
    |||||||||||||||||||| |||||| ||| | ||||||||||||| ||| |||||||||||||||| |||||||||||||||||||||||||||| ||    
T  46264389 ttatttattaattttgttacgtctgcaacaactcaacctaatttttttccccctcatttgctttattaggtttgcaattatttaacctaacaaattctat 46264290  T
Q  363 ctaaaaaatgcatcgcac 380  Q
    ||||||||||||| ||||    
T  46264289 ctaaaaaatgcattgcac 46264272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 264 - 381
Target Start/End: Original strand, 30991459 - 30991578
Alignment:
Q  264 ttatttattaattttgttacctctgcagcaatttaacctaattttttc-ccgctcatttgctttattatgtttgcaattatttaacctaacaaattccat 362  Q
    |||||||| ||||||| ||| | |||| ||||||||| |||||||||  |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  30991459 ttatttatcaattttgatacgtttgcaacaatttaacttaattttttttccgctcatttgctttattatgtttgcaattatttaacctaacaaattccat 30991558  T
Q  363 ct-aaaaaatgcatcgcacc 381  Q
    || |||||||||||||||||    
T  30991559 ctaaaaaaatgcatcgcacc 30991578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 264 - 393
Target Start/End: Complemental strand, 4681699 - 4681573
Alignment:
Q  264 ttatttattaattttgttacctctgcagcaatttaacctaattttttcccgctcatttgctttattatgtttgcaattatttaacctaacaaattccatc 363  Q
    |||||||||||||||||||| |||||||||||||||| |||||||| |||| |   ||||||||||| ||||||||||||||||| ||||||||| ||||    
T  4681699 ttatttattaattttgttacgtctgcagcaatttaacttaattttt-cccgtt---ttgctttattaggtttgcaattatttaacttaacaaatttcatc 4681604  T
Q  364 taa-aaaatgcatcgcaccaatttcattcat 393  Q
    ||| ||||||||||||| |||||||||||||    
T  4681603 taaaaaaatgcatcgcatcaatttcattcat 4681573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 264 - 391
Target Start/End: Complemental strand, 48641546 - 48641417
Alignment:
Q  264 ttatttattaattttgttacctctgcagcaatttaacctaattttttcccgctcatttgctttattatgtttgcaattatttaacctaacaaattccatc 363  Q
    ||||||||||||||| |||| ||||||| || |||||||||||||| || ||||||||||||||||| ||||||||||||||||||||||||||| ||||    
T  48641546 ttatttattaattttcttacgtctgcaggaacttaacctaattttt-cctgctcatttgctttattaagtttgcaattatttaacctaacaaatttcatc 48641448  T
Q  364 taa---aaaatgcatcgcaccaatttcattc 391  Q
    |||   ||||| ||||||| |||||||||||    
T  48641447 taaaaaaaaattcatcgcatcaatttcattc 48641417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 264 - 391
Target Start/End: Original strand, 16671246 - 16671375
Alignment:
Q  264 ttatttattaattttgttacctctgcagcaa-tttaacctaattttttcccgctcatttgctttattatgtttgcaattatttaacctaacaaattccat 362  Q
    |||||||||||||||||||  |||||||||| ||||||| ||| |||| ||||||||||||| ||||| ||||||||||||||||||||||||||| |||    
T  16671246 ttatttattaattttgttaggtctgcagcaattttaaccaaatatttt-ccgctcatttgctctattaggtttgcaattatttaacctaacaaatttcat 16671344  T
Q  363 ct--aaaaaatgcatcgcaccaatttcattc 391  Q
    ||  |||||||||||||||||| ||||||||    
T  16671345 ctaaaaaaaatgcatcgcaccagtttcattc 16671375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 264 - 391
Target Start/End: Original strand, 17645614 - 17645743
Alignment:
Q  264 ttatttattaattttgttacctctgcagcaa-tttaacctaattttttcccgctcatttgctttattatgtttgcaattatttaacctaacaaattccat 362  Q
    |||||||||||||||||||  |||||||||| ||||||| ||| |||| ||||||||||||| ||||| ||||||||||||||||||||||||||| |||    
T  17645614 ttatttattaattttgttaggtctgcagcaattttaaccaaatatttt-ccgctcatttgctctattaggtttgcaattatttaacctaacaaatttcat 17645712  T
Q  363 ct--aaaaaatgcatcgcaccaatttcattc 391  Q
    ||  |||||||||||||||||| ||||||||    
T  17645713 ctaaaaaaaatgcatcgcaccagtttcattc 17645743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 256 - 347
Target Start/End: Complemental strand, 32278249 - 32278158
Alignment:
Q  256 taacatctttatttattaattttgttacctctgcagcaatttaacctaattttttcccgctcatttgctttattatgtttgcaattatttaa 347  Q
    ||||||| ||||||||||||| |||||| ||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||    
T  32278249 taacatccttatttattaattatgttacgtctgcagcaatttaacctaattttttcccgctcatttactttattaggtttgcaattatttaa 32278158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 264 - 390
Target Start/End: Original strand, 34837442 - 34837568
Alignment:
Q  264 ttatttattaattttgttacctctgcagcaatttaacctaattttttcccgctcatttgctttattatgtttgcaattatttaacctaacaaattccatc 363  Q
    ||||||||| |||||||||  ||| |||||||||||| ||||||||||| |||||||| |||||||| |||||||||||||| |||||||||||| ||||    
T  34837442 ttatttatttattttgttaggtcttcagcaatttaacataattttttcc-gctcatttactttattaggtttgcaattattttacctaacaaatttcatc 34837540  T
Q  364 t-aaaaaatgcatcgcaccaatttcatt 390  Q
    | |||||||||||||||| |||||||||    
T  34837541 taaaaaaatgcatcgcacaaatttcatt 34837568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 267 - 390
Target Start/End: Complemental strand, 2853320 - 2853195
Alignment:
Q  267 tttattaattttgttacctctgcagcaatttaacctaattttttccc-gctcatttgctttattatgtttgcaattatttaacctaacaaattccatcta 365  Q
    ||||||||||||||||| | || | |||||||||||||||||||  | | ||||||| ||||||| ||||||||||||||||||||||||||| ||||||    
T  2853320 tttattaattttgttacatttgtatcaatttaacctaattttttttcagttcatttgttttattaggtttgcaattatttaacctaacaaatttcatcta 2853221  T
Q  366 a-aaaatgcatcgcaccaatttcatt 390  Q
    | ||||||||||||||||||||||||    
T  2853220 aaaaaatgcatcgcaccaatttcatt 2853195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 69; E-Value: 8e-31
Query Start/End: Original strand, 258 - 354
Target Start/End: Complemental strand, 9142244 - 9142148
Alignment:
Q  258 acatctttatttattaattttgttacctctgcagcaatttaacctaattttttcccgctcatttgctttattatgtttgcaattatttaacctaaca 354  Q
    ||||| |||||||||||||||||||  ||||||  |||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||    
T  9142244 acatccttatttattaattttgttaggtctgcaataatttaacctaattttttcccgctcatttgctttatttggtttgcaattatttaacctaaca 9142148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 264 - 342
Target Start/End: Original strand, 11646627 - 11646705
Alignment:
Q  264 ttatttattaattttgttacctctgcagcaatttaacctaattttttcccgctcatttgctttattatgtttgcaatta 342  Q
    |||||||||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||| |||||||||||    
T  11646627 ttatttattaattttgttacgtctgcagcaatttaacctaatttttttccgctcatttgctttattaggtttgcaatta 11646705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 264 - 370
Target Start/End: Original strand, 21128040 - 21128146
Alignment:
Q  264 ttatttattaattttgttacctctgcagcaatttaacctaattttttcccgctcatttgctttattatgtttgcaattatttaacctaacaaattccatc 363  Q
    |||||||||||||||||||  ||||||||| ||||||||||| |||| ||||| ||||||||||||| |||| || ||||||||||||||||||||| ||    
T  21128040 ttatttattaattttgttaggtctgcagcagtttaacctaatctttttccgctgatttgctttattacgtttccatttatttaacctaacaaattccttc 21128139  T
Q  364 taaaaaa 370  Q
     ||||||    
T  21128140 aaaaaaa 21128146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 296 - 380
Target Start/End: Original strand, 43059223 - 43059308
Alignment:
Q  296 ttaacctaattttttcccgctcatttgctttattatgtttgcaattatttaacctaacaaattccatctaaaa-aatgcatcgcac 380  Q
    |||||||||||||||| |||||||||||||||||| |||||||||||||||| |||||||||||||||||||| ||||||| ||||    
T  43059223 ttaacctaattttttctcgctcatttgctttattaggtttgcaattatttaatctaacaaattccatctaaaagaatgcattgcac 43059308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 285 - 393
Target Start/End: Complemental strand, 1566593 - 1566482
Alignment:
Q  285 tctgcagcaatttaacctaattttttcc-cgctcatttgctttattatgtttgcaattatttaacctaacaaattccatctaa--aaaatgcatcgcacc 381  Q
    |||||| |||||||||||||||||||   ||| |||||||||||||| ||||||||||||||||||||||||||| |||||||  |||||| || |||||    
T  1566593 tctgcaacaatttaacctaatttttttttcgcacatttgctttattaggtttgcaattatttaacctaacaaatttcatctaaagaaaatgaattgcacc 1566494  T
Q  382 aatttcattcat 393  Q
    ||||||||||||    
T  1566493 aatttcattcat 1566482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 264 - 391
Target Start/End: Original strand, 4454924 - 4455052
Alignment:
Q  264 ttatttattaattttgttacctctgcagcaatttaacctaattttttcccgctcatttgctttattatgtttgcaattatttaacctaacaaattccatc 363  Q
    ||||||||||||||| |||  |||||| ||| |||||||||| ||||||| |  ||||||| ||||| ||| ||| | ||||||||||||||||||||||    
T  4454924 ttatttattaattttattaggtctgcaacaacttaacctaatattttccctccaatttgctgtattaggttagcagtaatttaacctaacaaattccatc 4455023  T
Q  364 t-aaaaaatgcatcgcaccaatttcattc 391  Q
    | ||||||||||||||| |||||||||||    
T  4455024 taaaaaaatgcatcgcatcaatttcattc 4455052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 287 - 391
Target Start/End: Complemental strand, 16362772 - 16362667
Alignment:
Q  287 tgcagcaatttaacctaattttttcccgctcatttgctttattatgtttgcaattatttaacctaacaaattccatctaa-aaaatgcatcgcaccaatt 385  Q
    ||||||||| ||| |||||||||| ||||||||||| |||||||  |||||| ||||||||||||||||||| |||| || ||||||||||||||||||     
T  16362772 tgcagcaatgtaatctaatttttttccgctcatttgttttattagatttgcagttatttaacctaacaaatttcatcaaataaaatgcatcgcaccaata 16362673  T
Q  386 tcattc 391  Q
    ||||||    
T  16362672 tcattc 16362667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 293 - 369
Target Start/End: Complemental strand, 40686967 - 40686892
Alignment:
Q  293 aatttaacctaattttttcccgctcatttgctttattatgtttgcaattatttaacctaacaaattccatctaaaaa 369  Q
    ||||||| |||||||||||  | | ||||||||||||| ||||||||||||||||||||||||||| ||||||||||    
T  40686967 aatttaagctaattttttca-gtttatttgctttattaggtttgcaattatttaacctaacaaattacatctaaaaa 40686892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 264 - 331
Target Start/End: Complemental strand, 23591304 - 23591237
Alignment:
Q  264 ttatttattaattttgttacctctgcagcaatttaacctaattttttcccgctcatttgctttattat 331  Q
    |||||||| ||||||||||  ||| |  ||||||||||||||||||||||||||||||||||||||||    
T  23591304 ttatttataaattttgttaggtctactacaatttaacctaattttttcccgctcatttgctttattat 23591237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 264 - 317
Target Start/End: Original strand, 34837388 - 34837441
Alignment:
Q  264 ttatttattaattttgttacctctgcagcaatttaacctaattttttcccgctc 317  Q
    |||||||||||||||||||  |||||| |||||||||||||||||||| |||||    
T  34837388 ttatttattaattttgttaggtctgcaacaatttaacctaattttttctcgctc 34837441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 341 - 391
Target Start/End: Original strand, 9395804 - 9395855
Alignment:
Q  341 tatttaacctaacaaattccatctaaaa-aatgcatcgcaccaatttcattc 391  Q
    ||||||||||||||| || ||||||||| |||||||||||||||||| ||||    
T  9395804 tatttaacctaacaattttcatctaaaacaatgcatcgcaccaattttattc 9395855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 264 - 310
Target Start/End: Original strand, 34837655 - 34837701
Alignment:
Q  264 ttatttattaattttgttacctctgcagcaatttaacctaatttttt 310  Q
    |||||||||| ||||||||  | ||||||||||||||||||||||||    
T  34837655 ttatttattagttttgttaggtatgcagcaatttaacctaatttttt 34837701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 264 - 321
Target Start/End: Original strand, 6249840 - 6249897
Alignment:
Q  264 ttatttattaattttgttacctctgcagcaatttaacctaattttttcccgctcattt 321  Q
    |||||||||||||||||||  ||||||||  ||||||||||| |||| || |||||||    
T  6249840 ttatttattaattttgttaggtctgcagcgttttaacctaatatttttcctctcattt 6249897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 343 - 391
Target Start/End: Original strand, 6249896 - 6249945
Alignment:
Q  343 tttaacctaacaaattccatctaaaa-aatgcatcgcaccaatttcattc 391  Q
    |||||||||||||| |||| | |||| |||||||||||||||||||||||    
T  6249896 tttaacctaacaaactccaacgaaaaaaatgcatcgcaccaatttcattc 6249945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 264 - 313
Target Start/End: Complemental strand, 46264135 - 46264086
Alignment:
Q  264 ttatttattaattttgttacctctgcagcaatttaacctaattttttccc 313  Q
    |||||||||||||||||||  |||| ||||| | ||||||||||||||||    
T  46264135 ttatttattaattttgttaaatctgtagcaactcaacctaattttttccc 46264086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 365 - 393
Target Start/End: Original strand, 4455240 - 4455268
Alignment:
Q  365 aaaaaatgcatcgcaccaatttcattcat 393  Q
    |||||||||||||||||||||||||||||    
T  4455240 aaaaaatgcatcgcaccaatttcattcat 4455268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 221 - 261
Target Start/End: Original strand, 5194286 - 5194326
Alignment:
Q  221 tgtacaatggggtgtatgagtaaagggtgttcatgtaacat 261  Q
    ||||||||| ||||||||| |||| ||||||||||||||||    
T  5194286 tgtacaatgaggtgtatgaataaatggtgttcatgtaacat 5194326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 221 - 261
Target Start/End: Original strand, 5810979 - 5811019
Alignment:
Q  221 tgtacaatggggtgtatgagtaaagggtgttcatgtaacat 261  Q
    |||||||||||||||| || ||||||||| |||||||||||    
T  5810979 tgtacaatggggtgtaggaataaagggtggtcatgtaacat 5811019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 221 - 261
Target Start/End: Original strand, 24001067 - 24001107
Alignment:
Q  221 tgtacaatggggtgtatgagtaaagggtgttcatgtaacat 261  Q
    ||||||||||| |||| || |||||||||||||||||||||    
T  24001067 tgtacaatgggatgtaggaataaagggtgttcatgtaacat 24001107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 221 - 261
Target Start/End: Original strand, 26898457 - 26898497
Alignment:
Q  221 tgtacaatggggtgtatgagtaaagggtgttcatgtaacat 261  Q
    |||||||| |||||||||| |||| ||||||||||||||||    
T  26898457 tgtacaattgggtgtatgaataaaaggtgttcatgtaacat 26898497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 221 - 261
Target Start/End: Original strand, 27535286 - 27535326
Alignment:
Q  221 tgtacaatggggtgtatgagtaaagggtgttcatgtaacat 261  Q
    |||||||| | |||||||| |||||||||||||||||||||    
T  27535286 tgtacaatagagtgtatgattaaagggtgttcatgtaacat 27535326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #61
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 221 - 261
Target Start/End: Original strand, 31408688 - 31408728
Alignment:
Q  221 tgtacaatggggtgtatgagtaaagggtgttcatgtaacat 261  Q
    |||||||| | |||||||| |||||||||||||||||||||    
T  31408688 tgtacaatagagtgtatgattaaagggtgttcatgtaacat 31408728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #62
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 221 - 261
Target Start/End: Complemental strand, 40236964 - 40236924
Alignment:
Q  221 tgtacaatggggtgtatgagtaaagggtgttcatgtaacat 261  Q
    |||||||| || ||||||| |||||||||||||||||||||    
T  40236964 tgtacaataggatgtatgattaaagggtgttcatgtaacat 40236924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #63
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 221 - 261
Target Start/End: Complemental strand, 41861719 - 41861679
Alignment:
Q  221 tgtacaatggggtgtatgagtaaagggtgttcatgtaacat 261  Q
    |||| ||| |||||||||| |||||||||||||||||||||    
T  41861719 tgtataattgggtgtatgaataaagggtgttcatgtaacat 41861679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #64
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 221 - 261
Target Start/End: Original strand, 42538486 - 42538526
Alignment:
Q  221 tgtacaatggggtgtatgagtaaagggtgttcatgtaacat 261  Q
    ||||||||||| |||| || |||||||||||||||||||||    
T  42538486 tgtacaatgggatgtaggaataaagggtgttcatgtaacat 42538526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #65
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 221 - 261
Target Start/End: Complemental strand, 43317488 - 43317448
Alignment:
Q  221 tgtacaatggggtgtatgagtaaagggtgttcatgtaacat 261  Q
    ||||||||| ||||||||| |||| ||||||||||||||||    
T  43317488 tgtacaatgaggtgtatgaataaatggtgttcatgtaacat 43317448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #66
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 221 - 261
Target Start/End: Complemental strand, 44326223 - 44326183
Alignment:
Q  221 tgtacaatggggtgtatgagtaaagggtgttcatgtaacat 261  Q
    ||||||||||| ||||||| ||||||||||| |||||||||    
T  44326223 tgtacaatgggatgtatgaataaagggtgtttatgtaacat 44326183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 113; Significance: 4e-57; HSPs: 39)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 113; E-Value: 4e-57
Query Start/End: Original strand, 260 - 391
Target Start/End: Original strand, 9828915 - 9829047
Alignment:
Q  260 atctttatttattaattttgttacctctgcagcaatttaacctaattttttcccgctcatttgctttattatgtttgcaattatttaacctaacaaattc 359  Q
    ||||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  9828915 atctttattaattaattttgttacctctgcagcaatttaacttaattttttcccgctcatttgctttattaggtttgcaattatttaacctaacaaattc 9829014  T
Q  360 catct-aaaaaatgcatcgcaccaatttcattc 391  Q
    ||||| |||||||||||||||||||||||||||    
T  9829015 catctaaaaaaatgcatcgcaccaatttcattc 9829047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 264 - 391
Target Start/End: Original strand, 25068188 - 25068317
Alignment:
Q  264 ttatttattaattttgttacctctgcagcaatttaacctaattttttcccgctcatttgctttattatgtttgcaattatttaacctaac-aaattccat 362  Q
    |||||||||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||| |||||||||||||||||||||| |||||||||    
T  25068188 ttatttattaattttgttacgtctgcagcaatttaacctaatttttttccgctcatttgctttattaggtttgcaattatttaacctaacaaaattccat 25068287  T
Q  363 ct-aaaaaatgcatcgcaccaatttcattc 391  Q
    || |||||||||||||||||||||||||||    
T  25068288 ctaaaaaaatgcatcgcaccaatttcattc 25068317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 264 - 393
Target Start/End: Complemental strand, 4811168 - 4811037
Alignment:
Q  264 ttatttattaattttgttacctctgcagcaatttaacctaattttttcccgctcatttgctttattatgtttgcaattatttaacctaacaaattccatc 363  Q
    ||||||||| |||||||||| ||||||||||||||||||||||||||||||||| |||||||||||| |||||||||||||||||||||| |||||||||    
T  4811168 ttatttatttattttgttacgtctgcagcaatttaacctaattttttcccgctcgtttgctttattaggtttgcaattatttaacctaactaattccatc 4811069  T
Q  364 taa--aaaatgcatcgcaccaatttcattcat 393  Q
    |||  |||||| ||||||||||||||||||||    
T  4811068 taaaaaaaatgaatcgcaccaatttcattcat 4811037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 264 - 393
Target Start/End: Original strand, 17202850 - 17202980
Alignment:
Q  264 ttatttattaattttgttacctctgcagcaatttaacctaattttttcccgctcatttgctttattatgtttgcaattatttaacctaacaaattccatc 363  Q
    |||||||| ||||||||||  ||||||||||||||||||||||||||||||| ||||||||||||||  |||||||||||||||||||||||||||||||    
T  17202850 ttatttataaattttgttaggtctgcagcaatttaacctaattttttcccgcccatttgctttattagatttgcaattatttaacctaacaaattccatc 17202949  T
Q  364 t-aaaaaatgcatcgcaccaatttcattcat 393  Q
    | ||||||||||||||| |||||||||||||    
T  17202950 taaaaaaatgcatcgcatcaatttcattcat 17202980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 264 - 386
Target Start/End: Complemental strand, 17906906 - 17906784
Alignment:
Q  264 ttatttattaattttgttacctctgcagcaatttaacctaattttttcccgctcatttgctttattatgtttgcaattatttaacctaacaaattccatc 363  Q
    |||||||||||||||||||  | |||||||||||||||||||||||||| ||||||||||||||||| ||||| ||||||||||||||||||||||||||    
T  17906906 ttatttattaattttgttaggtttgcagcaatttaacctaattttttccagctcatttgctttattaggtttgtaattatttaacctaacaaattccatc 17906807  T
Q  364 taaaaaatgcatcgcaccaattt 386  Q
    ||||||||| |||||||||||||    
T  17906806 taaaaaatgtatcgcaccaattt 17906784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 93; E-Value: 4e-45
Query Start/End: Original strand, 264 - 391
Target Start/End: Original strand, 25067962 - 25068090
Alignment:
Q  264 ttatttattaattttgttacctctgcagcaatttaacctaattttttcccgctcatttgctttattatgtttgcaattatttaacctaacaaattccatc 363  Q
    |||||| ||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||| | ||||||||||||||||| ||||||||| ||||    
T  25067962 ttatttgttaattttgttacatctgcagcaatttaacctaatttttttccgctcatttgctttataaggtttgcaattatttaacataacaaattacatc 25068061  T
Q  364 t-aaaaaatgcatcgcaccaatttcattc 391  Q
    | |||||||||||||||||||||||||||    
T  25068062 taaaaaaatgcatcgcaccaatttcattc 25068090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 264 - 390
Target Start/End: Original strand, 17201597 - 17201724
Alignment:
Q  264 ttatttattaattttgttacctctgcagcaatttaacctaattttttcccgctcatttgctttattatgtttgcaattatttaacctaacaaattccatc 363  Q
    |||||||||||||||||||| |||||| ||||||||||||| ||||| ||||||||||| ||||||| ||||||||||||||||||||||||||| ||||    
T  17201597 ttatttattaattttgttacgtctgcaacaatttaacctaacttttttccgctcatttgttttattaggtttgcaattatttaacctaacaaatttcatc 17201696  T
Q  364 t-aaaaaatgcatcgcaccaatttcatt 390  Q
    | ||||||||||||||||||||||||||    
T  17201697 taaaaaaatgcatcgcaccaatttcatt 17201724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 89; E-Value: 9e-43
Query Start/End: Original strand, 264 - 390
Target Start/End: Original strand, 23610432 - 23610559
Alignment:
Q  264 ttatttattaattttgttacctctgcagcaatttaacctaa-ttttttcccgctcatttgctttattatgtttgcaattatttaacctaacaaattccat 362  Q
    |||||||||||||||||||  |||||| ||||||||||||| |||||||||||||||||||||||||| |||| ||||||||||||||||||||||||||    
T  23610432 ttatttattaattttgttaggtctgcaacaatttaacctaatttttttcccgctcatttgctttattaggttt-caattatttaacctaacaaattccat 23610530  T
Q  363 cta-aaaaatgcatcgcaccaatttcatt 390  Q
    ||| |||||||||||||||||||||||||    
T  23610531 ctacaaaaatgcatcgcaccaatttcatt 23610559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 264 - 390
Target Start/End: Original strand, 27579598 - 27579725
Alignment:
Q  264 ttatttattaattttgttacctctgcagcaatttaacctaattttttcccgctcatttgctttattatgtttgcaattatttaacctaacaaattccatc 363  Q
    ||||||||||||||||||   |||||| |||||||||||||||||||||| |||||||||||||||| |||||||||||||||||||||||||||| |||    
T  27579598 ttatttattaattttgttcggtctgcaacaatttaacctaattttttcccactcatttgctttattaggtttgcaattatttaacctaacaaattcaatc 27579697  T
Q  364 t-aaaaaatgcatcgcaccaatttcatt 390  Q
    | |||||||||||| |||||||||||||    
T  27579698 taaaaaaatgcatcacaccaatttcatt 27579725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 264 - 390
Target Start/End: Complemental strand, 4100424 - 4100293
Alignment:
Q  264 ttatttattaattttgttacctctgcagcaatttaacctaattttttcccgctcatt----tgctttattatgtttgcaattatttaacctaacaaattc 359  Q
    |||||||||||||||||||  |||||||||||||||||||||||||| ||| |||||    ||||||||||||||||||||||||||| |||||||||||    
T  4100424 ttatttattaattttgttaggtctgcagcaatttaacctaatttttttccgttcattaatttgctttattatgtttgcaattatttaagctaacaaattc 4100325  T
Q  360 catctaa-aaaatgcatcgcaccaatttcatt 390  Q
    ||||||| ||||||||||||||||||||||||    
T  4100324 catctaaaaaaatgcatcgcaccaatttcatt 4100293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 84; E-Value: 8e-40
Query Start/End: Original strand, 259 - 397
Target Start/End: Original strand, 808467 - 808605
Alignment:
Q  259 catctttatttattaattttgttacctctgcagcaatttaacctaattttttcccgctcatttgctttattatgtttgcaattatttaacctaacaaatt 358  Q
    |||| |||||||||||||||||||  |||||||||||||||| |||||||||| ||||||||||||||||||  ||||||||||||||| || |||||||    
T  808467 catccttatttattaattttgttagttctgcagcaatttaacgtaattttttctcgctcatttgctttattagatttgcaattatttaa-cttacaaatt 808565  T
Q  359 ccatctaaaaaa-tgcatcgcaccaatttcattcatctca 397  Q
    | |||||||||| ||||||||||||||||||||| |||||    
T  808566 ctatctaaaaaattgcatcgcaccaatttcattcctctca 808605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 260 - 390
Target Start/End: Original strand, 27315283 - 27315413
Alignment:
Q  260 atctttatttattaattttgttacctctgcagcaatttaacctaattttttcccgctcatttgctttattatgtttgcaattatttaacctaacaaattc 359  Q
    ||||||||||||||||||||||   |||||||||| |||||||||||||||||  || ||||||||||||| ||||||||||||||||||||||||||||    
T  27315283 atctttatttattaattttgttcggtctgcagcaacttaacctaattttttcca-ctaatttgctttattaggtttgcaattatttaacctaacaaattc 27315381  T
Q  360 catct-aaaaaatgcatcgcaccaatttcatt 390  Q
     |||| |||||||||||| |||||||||||||    
T  27315382 aatctaaaaaaatgcatcacaccaatttcatt 27315413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 264 - 393
Target Start/End: Original strand, 17199986 - 17200115
Alignment:
Q  264 ttatttattaattttgttacctctgcagcaatttaacctaattttttcccgctcatttgctttattatgtttgcaattatttaacctaacaaattccatc 363  Q
    |||||||||||||||||||  |||| |||||||||||||||| ||||||| |||||||||| ||||| |||  || | ||||||||||| ||||| ||||    
T  17199986 ttatttattaattttgttaggtctgtagcaatttaacctaatattttccctctcatttgctatattaggttaacagtaatttaacctaataaatttcatc 17200085  T
Q  364 taaaaaatgcatcgcaccaatttcattcat 393  Q
    ||||||||||||||||||||||||||||||    
T  17200086 taaaaaatgcatcgcaccaatttcattcat 17200115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 264 - 390
Target Start/End: Original strand, 808829 - 808958
Alignment:
Q  264 ttatttattaattttgttacctctgcagcaatttaacctaatttttt-cccgctcatttgctttattatgtttgcaattatttaacctaacaaattccat 362  Q
    |||| ||||||||||||||  |||||||||||||||||||||||||| ||| |||||||||||||||| |||||||||||||||||| |||||||| |||    
T  808829 ttatctattaattttgttaggtctgcagcaatttaacctaatttttttcccactcatttgctttattaggtttgcaattatttaaccaaacaaatttcat 808928  T
Q  363 ctaaa--aaatgcatcgcaccaatttcatt 390  Q
    |||||  ||||||||| ||| |||||||||    
T  808929 ctaaaataaatgcatcacactaatttcatt 808958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 264 - 386
Target Start/End: Original strand, 23622218 - 23622341
Alignment:
Q  264 ttatttattaattttgttacctctgcagcaatttaacctaattttttcccgctcatttgctttattatgtttgcaattatttaacctaacaaattccatc 363  Q
    |||||||||||||||||||  ||||||  |||||||||||| |||||||| |||||||||||||||| ||||||||||||||||||||||||||| || |    
T  23622218 ttatttattaattttgttaggtctgcaataatttaacctaactttttcccactcatttgctttattaggtttgcaattatttaacctaacaaatttcagc 23622317  T
Q  364 t-aaaaaatgcatcgcaccaattt 386  Q
    | ||||||||  ||||||||||||    
T  23622318 taaaaaaatgtgtcgcaccaattt 23622341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 264 - 393
Target Start/End: Complemental strand, 32208513 - 32208383
Alignment:
Q  264 ttatttattaattttgttacctctgcagcaatttaacctaattttttcccgctcatttgctttattatgtttgcaatta-tttaacctaacaaattccat 362  Q
    |||||||||||||||| ||  |||||| |||||||| |||||||||||| ||||||||||||||||| ||||||||||| ||||||||||||||||||||    
T  32208513 ttatttattaattttgctaggtctgcaacaatttaatctaattttttcc-gctcatttgctttattaggtttgcaattattttaacctaacaaattccat 32208415  T
Q  363 cta-aaaaatgcatcgcaccaatttcattcat 393  Q
    ||| |||||||||||  || ||||||||||||    
T  32208414 ctagaaaaatgcatcagactaatttcattcat 32208383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 295 - 390
Target Start/End: Original strand, 17202661 - 17202758
Alignment:
Q  295 tttaacctaattttttcc-cgctcatttgctttattatgtttgcaattatttaacctaacaaattccatct-aaaaaatgcatcgcaccaatttcatt 390  Q
    |||||||||||||||| | |||||||||||||||||| |||||||||||||||| |||||||||||||||| |||||||| |||||||||||||||||    
T  17202661 tttaacctaatttttttcacgctcatttgctttattaggtttgcaattatttaatctaacaaattccatctaaaaaaatgtatcgcaccaatttcatt 17202758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 264 - 391
Target Start/End: Complemental strand, 26832622 - 26832494
Alignment:
Q  264 ttatttattaattttgttacctctgcagcaatttaacctaattttttccc-gctcatttgctttattatgtttgcaattatttaacctaacaaattccat 362  Q
    ||||||||||| |||||||  | |||| ||||||||||||||||||| || ||| ||||||||||||| ||||||||||||||||| ||||||||| |||    
T  26832622 ttatttattaactttgttagat-tgcaacaatttaacctaatttttttccagcttatttgctttattaggtttgcaattatttaacttaacaaattacat 26832524  T
Q  363 ctaa-aaaatgcatcgcaccaatttcattc 391  Q
    |||| ||||||||| |||||||||||||||    
T  26832523 ctaaaaaaatgcatagcaccaatttcattc 26832494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 264 - 391
Target Start/End: Original strand, 15130899 - 15131029
Alignment:
Q  264 ttatttattaattttgttacctctgcagcaatttaacctaattttttcccgctcatttgctttattatgtttgcaattatttaacctaacaaattccatc 363  Q
    |||||||||||||||||||| |||||||||| ||||| ||| | ||| || |||||| |||||||||  |||||||||||||||||||||||||||| ||    
T  15130899 ttatttattaattttgttacgtctgcagcaacttaacgtaaatattttccactcattcgctttattagatttgcaattatttaacctaacaaattccctc 15130998  T
Q  364 t-aaaaaatgcatcgcac--caatttcattc 391  Q
    | ||||||||||| ||||  |||||||||||    
T  15130999 taaaaaaatgcattgcacatcaatttcattc 15131029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 264 - 393
Target Start/End: Original strand, 29201558 - 29201676
Alignment:
Q  264 ttatttattaattttgttacctctgcagcaatttaacctaattttttcccgctcatttgctttattatgtttgcaattatttaacctaacaaattccatc 363  Q
    |||||||||||||||||||  |||||||||||||||||||||||||| |||||||||||||||            |||||||||||||||||||| ||||    
T  29201558 ttatttattaattttgttaggtctgcagcaatttaacctaatttttttccgctcatttgcttt------------attatttaacctaacaaatttcatc 29201645  T
Q  364 t-aaaaaatgcatcgcaccaatttcattcat 393  Q
    | |||||||||||| ||||||||||||||||    
T  29201646 taaaaaaatgcatcacaccaatttcattcat 29201676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 264 - 393
Target Start/End: Original strand, 17080035 - 17080166
Alignment:
Q  264 ttatttattaattttgttacctctgcagcaatttaacctaattttttcccgctcatttgctttattatgtttgcaattatttaacctaacaaattccatc 363  Q
    ||||||||||||||| |||  ||||||||||  ||||||||| ||||||  |  ||||||| ||||| ||| ||| | |||||||||||||||||| |||    
T  17080035 ttatttattaattttattatgtctgcagcaacctaacctaatattttccgtccaatttgctgtattaggttagcattaatttaacctaacaaattctatc 17080134  T
Q  364 t--aaaaaatgcatcgcaccaatttcattcat 393  Q
    |  |||||||||||||||||||||||||||||    
T  17080135 tagaaaaaatgcatcgcaccaatttcattcat 17080166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 285 - 390
Target Start/End: Original strand, 23902528 - 23902634
Alignment:
Q  285 tctgcagcaatttaacctaattttttcccgctcatttgctttattatgtttgcaattatttaacctaacaaattccatc-taaaaaatgcatcgcaccaa 383  Q
    ||||||||||||||||||||| |||||||| ||||||| | ||||| |||  || | |||||||||||||||||| ||| |||||||||||| |||||||    
T  23902528 tctgcagcaatttaacctaatattttcccgttcatttgttgtattaggttaccagtaatttaacctaacaaattctatcttaaaaaatgcattgcaccaa 23902627  T
Q  384 tttcatt 390  Q
    |||||||    
T  23902628 tttcatt 23902634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 264 - 390
Target Start/End: Original strand, 808693 - 808811
Alignment:
Q  264 ttatttattaattttgttacctctgcagcaatttaacctaattttttcccgctcatttgctttattatgtttgcaattatttaacctaacaaattccatc 363  Q
    |||||||||||||||||||  ||||| |||||||||||||| ||||||||||||||||          |||||||||||||||||||||||||||  |||    
T  808693 ttatttattaattttgttatgtctgctgcaatttaacctaa-tttttcccgctcattt---------agtttgcaattatttaacctaacaaattttatc 808782  T
Q  364 t--aaaaaatgcatcgcaccaatttcatt 390  Q
    |  |||||||||||| ||| |||||||||    
T  808783 taaaaaaaatgcatcccactaatttcatt 808811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 285 - 340
Target Start/End: Original strand, 17011130 - 17011185
Alignment:
Q  285 tctgcagcaatttaacctaattttttcccgctcatttgctttattatgtttgcaat 340  Q
    ||||||||||||||||||||| |||||||||||||||| | ||||||||| |||||    
T  17011130 tctgcagcaatttaacctaatattttcccgctcatttgatgtattatgttagcaat 17011185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 266 - 328
Target Start/End: Original strand, 1393582 - 1393644
Alignment:
Q  266 atttattaattttgttacctctgcagcaatttaacctaattttttcccgctcatttgctttat 328  Q
    |||||||||||||||||  ||||||||||||||| ||||||||||  || |||||||||||||    
T  1393582 atttattaattttgttaagtctgcagcaatttaaactaattttttttcggtcatttgctttat 1393644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 264 - 310
Target Start/End: Complemental strand, 4125755 - 4125709
Alignment:
Q  264 ttatttattaattttgttacctctgcagcaatttaacctaatttttt 310  Q
    |||||||||||||||||||  ||||||||||||||||||||||||||    
T  4125755 ttatttattaattttgttaggtctgcagcaatttaacctaatttttt 4125709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 266 - 352
Target Start/End: Original strand, 8685155 - 8685236
Alignment:
Q  266 atttattaattttgttacctctgcagcaatttaacctaattttttcccgctcatttgctttattatgtttgcaattatttaacctaa 352  Q
    |||||||||||||||||  |||||| ||||||||     | |||||||||||||||||| ||||||||| ||||| |||||||||||    
T  8685155 atttattaattttgttaggtctgcaacaatttaa-----tattttcccgctcatttgctgtattatgttagcaataatttaacctaa 8685236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 266 - 352
Target Start/End: Original strand, 8674476 - 8674557
Alignment:
Q  266 atttattaattttgttacctctgcagcaatttaacctaattttttcccgctcatttgctttattatgtttgcaattatttaacctaa 352  Q
    |||||||||||||||||  |||||| ||||||||     | |||||||||| ||||||| ||||||||| ||||| |||||||||||    
T  8674476 atttattaattttgttaggtctgcaacaatttaa-----tattttcccgcttatttgctgtattatgttagcaataatttaacctaa 8674557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 307 - 368
Target Start/End: Complemental strand, 32208634 - 32208573
Alignment:
Q  307 ttttcccgctcatttgctttattatgtttgcaattatttaacctaacaaattccatctaaaa 368  Q
    |||| ||||| |||||||| ||||  ||| |||||||||||| |||||||||||||||||||    
T  32208634 tttttccgctgatttgcttgattagatttccaattatttaacttaacaaattccatctaaaa 32208573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 265 - 313
Target Start/End: Original strand, 17011026 - 17011074
Alignment:
Q  265 tatttattaattttgttacctctgcagcaatttaacctaattttttccc 313  Q
    ||||||||||||||||||  |||||||||| |||||||||||| |||||    
T  17011026 tatttattaattttgttaagtctgcagcaacttaacctaatttcttccc 17011074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 221 - 261
Target Start/End: Complemental strand, 27441587 - 27441547
Alignment:
Q  221 tgtacaatggggtgtatgagtaaagggtgttcatgtaacat 261  Q
    |||||||| |||||||||| |||||||||||||||||||||    
T  27441587 tgtacaatagggtgtatgattaaagggtgttcatgtaacat 27441547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 264 - 311
Target Start/End: Original strand, 19121169 - 19121216
Alignment:
Q  264 ttatttattaattttgttacctctgcagcaatttaacctaattttttc 311  Q
    |||||||||||||||||||  ||||||||||||||| ||||| |||||    
T  19121169 ttatttattaattttgttagatctgcagcaatttaatctaatattttc 19121216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 264 - 310
Target Start/End: Original strand, 17010917 - 17010963
Alignment:
Q  264 ttatttattaattttgttacctctgcagcaatttaacctaatttttt 310  Q
    |||||||||||||||||||  ||||||||||||||| | ||||||||    
T  17010917 ttatttattaattttgttaagtctgcagcaatttaatcaaatttttt 17010963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 260 - 310
Target Start/End: Complemental strand, 33482488 - 33482438
Alignment:
Q  260 atctttatttattaattttgttacctctgcagcaatttaacctaatttttt 310  Q
    ||||||||||||||||||| |||| ||||||| || |||||||||| ||||    
T  33482488 atctttatttattaattttattacgtctgcagtaacttaacctaatatttt 33482438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 221 - 261
Target Start/End: Original strand, 9698388 - 9698428
Alignment:
Q  221 tgtacaatggggtgtatgagtaaagggtgttcatgtaacat 261  Q
    ||||||||||| |||| || |||||||||||||||||||||    
T  9698388 tgtacaatgggatgtaggaataaagggtgttcatgtaacat 9698428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 264 - 308
Target Start/End: Original strand, 25068140 - 25068184
Alignment:
Q  264 ttatttattaattttgttacctctgcagcaatttaacctaatttt 308  Q
    |||||||||||||||||||| | |||||| ||||||| |||||||    
T  25068140 ttatttattaattttgttacgtgtgcagctatttaacataatttt 25068184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 221 - 261
Target Start/End: Complemental strand, 26466844 - 26466804
Alignment:
Q  221 tgtacaatggggtgtatgagtaaagggtgttcatgtaacat 261  Q
    |||||||||||||||| || ||||||||||| |||||||||    
T  26466844 tgtacaatggggtgtaggaataaagggtgtttatgtaacat 26466804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 221 - 261
Target Start/End: Original strand, 26670064 - 26670104
Alignment:
Q  221 tgtacaatggggtgtatgagtaaagggtgttcatgtaacat 261  Q
    ||||||||| |||||| || |||||||||||||||||||||    
T  26670064 tgtacaatgaggtgtaggaataaagggtgttcatgtaacat 26670104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 221 - 261
Target Start/End: Original strand, 31109277 - 31109317
Alignment:
Q  221 tgtacaatggggtgtatgagtaaagggtgttcatgtaacat 261  Q
    |||| |||||| ||||||| |||||||||||||||||||||    
T  31109277 tgtataatgggatgtatgattaaagggtgttcatgtaacat 31109317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 109; Significance: 1e-54; HSPs: 67)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 264 - 391
Target Start/End: Original strand, 48076190 - 48076318
Alignment:
Q  264 ttatttattaattttgttacctctgcagcaatttaacctaattttttcccgctcatttgctttattatgtttgcaattatttaacctaacaaattccatc 363  Q
    |||||||||||||||||||| ||||||||||||||| |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  48076190 ttatttattaattttgttacgtctgcagcaatttaatctaattttttcccgctcatttgctttattaggtttgcaattatttaacctaacaaattccatc 48076289  T
Q  364 t-aaaaaatgcatcgcaccaatttcattc 391  Q
    | |||||||||||||||||||||||||||    
T  48076290 taaaaaaatgcatcgcaccaatttcattc 48076318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 108; E-Value: 4e-54
Query Start/End: Original strand, 264 - 391
Target Start/End: Complemental strand, 23952610 - 23952483
Alignment:
Q  264 ttatttattaattttgttacctctgcagcaatttaacctaattttttcccgctcatttgctttattatgtttgcaattatttaacctaacaaattccatc 363  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||| |||||||||||||||||| ||||||||||||||||||||| |||||||||     
T  23952610 ttatttattaattttgttacgtctgcagcaatttaacctaattttttcacgctcatttgctttattaggtttgcaattatttaacctaaaaaattccatt 23952511  T
Q  364 taaaaaatgcatcgcaccaatttcattc 391  Q
    ||||||||||||||||||||||||||||    
T  23952510 taaaaaatgcatcgcaccaatttcattc 23952483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 103; E-Value: 4e-51
Query Start/End: Original strand, 264 - 393
Target Start/End: Original strand, 36639172 - 36639302
Alignment:
Q  264 ttatttattaattttgttacctctgcagcaatttaacctaattttttcccgctcatttgctttattatgtttgcaattatttaacctaacaaattccatc 363  Q
    |||||||||||||||||||| | || ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| ||||    
T  36639172 ttatttattaattttgttacgtttgtagcaatttaacctaattttttcccgctcatttgctttattaggtttgcaattatttaacctaacaaatttcatc 36639271  T
Q  364 t-aaaaaatgcatcgcaccaatttcattcat 393  Q
    | |||||||||||||||||||||||||||||    
T  36639272 taaaaaaatgcatcgcaccaatttcattcat 36639302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 267 - 391
Target Start/End: Original strand, 48076371 - 48076496
Alignment:
Q  267 tttattaattttgttacctctgcagcaatttaacctaattttttcccgctcatttgctttattatgtttgcaattatttaacctaacaaattccatct-a 365  Q
    ||||||||||||||||| ||||||||||||||||||||||||| |||||||||||||||||||| ||||||||||||||||||||||||||| ||||| |    
T  48076371 tttattaattttgttacgtctgcagcaatttaacctaatttttccccgctcatttgctttattaggtttgcaattatttaacctaacaaatttcatctaa 48076470  T
Q  366 aaaaatgcatcgcaccaatttcattc 391  Q
    ||||||||||||||||||||||||||    
T  48076471 aaaaatgcatcgcaccaatttcattc 48076496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 260 - 390
Target Start/End: Original strand, 4941674 - 4941805
Alignment:
Q  260 atctttatttattaattttgttacctctgcagcaatttaacctaattttttcccgctcatttgctttattatgtttgcaattatttaacctaacaaattc 359  Q
    |||||||||||||||||||||||| ||| ||  |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||     
T  4941674 atctttatttattaattttgttacatctacaataatttaacctaattttttcccgctcatttgctttattaggtttgcaattatttaacctaacaaattt 4941773  T
Q  360 catct-aaaaaatgcatcgcaccaatttcatt 390  Q
    ||||| ||||||||||||||||||||||||||    
T  4941774 catctaaaaaaatgcatcgcaccaatttcatt 4941805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 264 - 391
Target Start/End: Complemental strand, 23952886 - 23952758
Alignment:
Q  264 ttatttattaattttgttacctctgcagcaatttaacctaattttttcccgctcatttgctttattatgtttgcaattatttaacctaacaaattccatc 363  Q
    |||||||||||||||||||| |||||||||||||||||||||||||| ||||||||||| ||||||| ||||||||||||||||| ||||||||||||||    
T  23952886 ttatttattaattttgttacgtctgcagcaatttaacctaatttttttccgctcatttgttttattaggtttgcaattatttaacttaacaaattccatc 23952787  T
Q  364 taa-aaaatgcatcgcaccaatttcattc 391  Q
    ||| |||||||||||| ||||||||||||    
T  23952786 taaaaaaatgcatcgcgccaatttcattc 23952758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 264 - 391
Target Start/End: Complemental strand, 54653755 - 54653627
Alignment:
Q  264 ttatttattaattttgttacctctgcagcaatttaacctaattttttcccgctcatttgctttattatgtttgcaattatttaacctaacaaattccatc 363  Q
    |||||||||||||||||||| |||||| ||||||||||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||| |||    
T  54653755 ttatttattaattttgttacgtctgcatcaatttaacctaattttttcccgctcatttgctttattaggtttgcagttatttaacctaacaaattcaatc 54653656  T
Q  364 t-aaaaaatgcatcgcaccaatttcattc 391  Q
    | |||||||||||| ||||||||||||||    
T  54653655 taaaaaaatgcatcacaccaatttcattc 54653627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 260 - 393
Target Start/End: Original strand, 2177260 - 2177394
Alignment:
Q  260 atctttatttattaattttgttacctctgcagcaatttaacctaattttttcccgctcatttgctttattatgtttgcaattatttaacctaacaaattc 359  Q
    ||||||||||||||||| |||||  |||||||||||||||  ||||||||||||||||||||||||||||| ||||||||||| |||||||||||||||     
T  2177260 atctttatttattaattctgttagatctgcagcaatttaatttaattttttcccgctcatttgctttattaggtttgcaattacttaacctaacaaattt 2177359  T
Q  360 catctaaaaa-atgcatcgcaccaatttcattcat 393  Q
    |||||||||| ||||||||||||||||||||||||    
T  2177360 catctaaaaacatgcatcgcaccaatttcattcat 2177394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 264 - 391
Target Start/End: Original strand, 47768952 - 47769081
Alignment:
Q  264 ttatttattaattttgttacctctgcagcaatttaacctaattttttcccgctcatttgctttattatgtttgcaattatttaacctaacaaattccatc 363  Q
    |||||||||||||||||||| |||||||||||||||||||||||||| |||||||||||||| |||| ||||||||||||||||||||||||||| ||||    
T  47768952 ttatttattaattttgttacgtctgcagcaatttaacctaatttttttccgctcatttgcttcattaggtttgcaattatttaacctaacaaatttcatc 47769051  T
Q  364 t--aaaaaatgcatcgcaccaatttcattc 391  Q
    |  |||||||||||| ||||||||||||||    
T  47769052 ttaaaaaaatgcatcacaccaatttcattc 47769081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 94; E-Value: 9e-46
Query Start/End: Original strand, 257 - 391
Target Start/End: Complemental strand, 2481761 - 2481629
Alignment:
Q  257 aacatctttatttattaattttgttacctctgcagcaatttaacctaattttttcccgctcatttgctttattatgtttgcaattatttaacctaacaaa 356  Q
    ||||||||||| ||||||||||||||| |||||| ||| ||||||||||||||||||||||||||||||||||| |||||||   |||||||||||||||    
T  2481761 aacatctttatctattaattttgttacgtctgcaacaacttaacctaattttttcccgctcatttgctttattaggtttgca---atttaacctaacaaa 2481665  T
Q  357 ttccatct-aaaaaatgcatcgcaccaatttcattc 391  Q
    |||||||| |||||||||||||||||||||||||||    
T  2481664 ttccatctaaaaaaatgcatcgcaccaatttcattc 2481629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 264 - 391
Target Start/End: Original strand, 22292898 - 22293025
Alignment:
Q  264 ttatttattaattttgttacctctgcagcaatttaacctaattttttcccgctcatttgctttattatgtttgcaattatttaacctaacaaattccatc 363  Q
    |||||||||||||||| ||  |||||||||||||||||||||||||| ||||||||||||||||||| |||||||||||||||||||||||||||| ||     
T  22292898 ttatttattaattttgctaggtctgcagcaatttaacctaatttttttccgctcatttgctttattaggtttgcaattatttaacctaacaaattcaata 22292997  T
Q  364 taaaaaatgcatcgcaccaatttcattc 391  Q
     |||||||||||||||||||||| ||||    
T  22292998 aaaaaaatgcatcgcaccaattttattc 22293025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 264 - 390
Target Start/End: Complemental strand, 53144951 - 53144824
Alignment:
Q  264 ttatttattaattttgttacctctgcagcaatttaacctaattttttcccgctcatttgctttattatgtttgcaattatttaacctaacaaattccatc 363  Q
    |||||||||||||||||||  |||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||||||| ||||    
T  53144951 ttatttattaattttgttagatctgcagcaatttaacctaattttttcccgctcatttgctttattaggtttgtaattatttaacctaacaaatttcatc 53144852  T
Q  364 taaaaa-atgcatcgcaccaatttcatt 390  Q
    |||||| |||||| | ||||||||||||    
T  53144851 taaaaatatgcattgtaccaatttcatt 53144824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 89; E-Value: 9e-43
Query Start/End: Original strand, 264 - 391
Target Start/End: Original strand, 7821303 - 7821431
Alignment:
Q  264 ttatttattaattttgttacctctgcagcaatttaacctaattttttcccgctcatttgctttattatgtttgcaattatttaacctaacaaattccatc 363  Q
    |||||||||||||||||||  | ||||||||||||||||||||||||||||| ||||||||||||||   ||||||||||||||||||| ||||||||||    
T  7821303 ttatttattaattttgttaggtatgcagcaatttaacctaattttttcccgcccatttgctttattaatgttgcaattatttaacctaataaattccatc 7821402  T
Q  364 t-aaaaaatgcatcgcaccaatttcattc 391  Q
    | |||||||||||||||||||||||||||    
T  7821403 taaaaaaatgcatcgcaccaatttcattc 7821431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 89; E-Value: 9e-43
Query Start/End: Original strand, 264 - 391
Target Start/End: Complemental strand, 28379867 - 28379740
Alignment:
Q  264 ttatttattaattttgttacctctgcagcaatttaacctaattttttcccgctcatttgctttattatgtttgcaattatttaacctaacaaattccatc 363  Q
    |||||||||||||||||||  |||||| ||||||||||||||||||| ||||||||||||||||||| |||||||||||||||||||||| |||||||||    
T  28379867 ttatttattaattttgttaggtctgcatcaatttaacctaatttttttccgctcatttgctttattaggtttgcaattatttaacctaac-aattccatc 28379769  T
Q  364 t-aaaaaatgcatcgcaccaatttcattc 391  Q
    | ||||||||||||||||||| |||||||    
T  28379768 taaaaaaatgcatcgcaccaagttcattc 28379740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 89; E-Value: 9e-43
Query Start/End: Original strand, 260 - 391
Target Start/End: Complemental strand, 52689728 - 52689596
Alignment:
Q  260 atctttatttattaattttgttacctctgcagcaatttaacctaattttttcccgctcatttgctttattatgtttgcaattatttaacctaacaaattc 359  Q
    ||||||||||||||||||| |||  ||||||  |||||| ||||||||||||||||||||||||||||||| ||||| |||||||||||||||||||||     
T  52689728 atctttatttattaattttattaggtctgcattaatttatcctaattttttcccgctcatttgctttattaggtttgtaattatttaacctaacaaattt 52689629  T
Q  360 catctaa-aaaatgcatcgcaccaatttcattc 391  Q
    ||||||| |||||||||||||||||||||||||    
T  52689628 catctaaaaaaatgcatcgcaccaatttcattc 52689596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 264 - 391
Target Start/End: Complemental strand, 21585662 - 21585535
Alignment:
Q  264 ttatttattaattttgttacctctgcagcaatttaacctaattttttcccgctcatttgctttattatgtttgcaattatttaacctaacaaattccatc 363  Q
    |||||||||||||||||||| |||||| ||||||||| ||||||||| || |||||||||||||||| ||||||||||||||||| ||||||||| ||||    
T  21585662 ttatttattaattttgttacgtctgcaacaatttaacttaatttttttcctctcatttgctttattaggtttgcaattatttaacttaacaaatttcatc 21585563  T
Q  364 taaaaaatgcatcgcaccaatttcattc 391  Q
    ||||||||| |||| |||||||||||||    
T  21585562 taaaaaatgtatcgtaccaatttcattc 21585535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 264 - 390
Target Start/End: Original strand, 24049565 - 24049692
Alignment:
Q  264 ttatttattaattttgttacctctgcagcaatttaacctaattttttcccgctcatttgctttattatgtttgcaattatttaacctaacaaattccatc 363  Q
    |||||||||||||||||||  | |||| ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| |||| ||||    
T  24049565 ttatttattaattttgttaggtgtgcatcaatttaacctaattttttcccgctcatttgctttattaggtttgcaattatttaacctaacgaatttcatc 24049664  T
Q  364 t-aaaaaatgcatcgcaccaatttcatt 390  Q
    | |||||||||||| |||||||||||||    
T  24049665 taaaaaaatgcatcacaccaatttcatt 24049692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 264 - 390
Target Start/End: Complemental strand, 43161846 - 43161719
Alignment:
Q  264 ttatttattaattttgttacctctgcagcaatttaacctaattttttcccgctcatttgctttattatgtttgcaattatttaacctaacaaattccatc 363  Q
    |||||||||||| ||||||| |||||| |||||||||||||||||||||||||||||||| |||||| ||||||||||||||||||||||||||| ||||    
T  43161846 ttatttattaatcttgttacgtctgcaacaatttaacctaattttttcccgctcatttgcattattaggtttgcaattatttaacctaacaaatttcatc 43161747  T
Q  364 taa-aaaatgcatcgcaccaatttcatt 390  Q
    ||| ||||| ||||||||||||| ||||    
T  43161746 taaaaaaatacatcgcaccaattccatt 43161719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 264 - 391
Target Start/End: Original strand, 7796785 - 7796913
Alignment:
Q  264 ttatttattaattttgttacctctgcagcaatttaacctaattttttcccgctcatttgctttattatgtttgcaattatttaacctaacaaattccatc 363  Q
    |||||||||||||||||||  |||||||||||||||||||||||||| ||||||||||||||||||| | ||| ||||||||||||||||||||| |||     
T  7796785 ttatttattaattttgttaggtctgcagcaatttaacctaatttttttccgctcatttgctttattaggattgtaattatttaacctaacaaatttcatt 7796884  T
Q  364 t-aaaaaatgcatcgcaccaatttcattc 391  Q
    | |||||||||||||||||||| ||||||    
T  7796885 taaaaaaatgcatcgcaccaatctcattc 7796913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 264 - 381
Target Start/End: Original strand, 48076545 - 48076664
Alignment:
Q  264 ttatttattaattttgttacctctgcagcaatttaacctaattttttcccgctcatttgctttattatgtttgcaattatttaacctaacaaattccatc 363  Q
    |||||||||||||||||||| | |||||||||||||||||||||||| ||||| ||||||||||||| |||| |||||||||||||||||||||||||||    
T  48076545 ttatttattaattttgttacgtttgcagcaatttaacctaatttttttccgctaatttgctttattaggtttacaattatttaacctaacaaattccatc 48076644  T
Q  364 t--aaaaaatgcatcgcacc 381  Q
    |  |||||||||||||||||    
T  48076645 taaaaaaaatgcatcgcacc 48076664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 84; E-Value: 8e-40
Query Start/End: Original strand, 267 - 366
Target Start/End: Original strand, 44500675 - 44500774
Alignment:
Q  267 tttattaattttgttacctctgcagcaatttaacctaattttttcccgctcatttgctttattatgtttgcaattatttaacctaacaaattccatctaa 366  Q
    ||||||||||||||||  |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||||||    
T  44500675 tttattaattttgttaggtctgcagcaatttaacctaattttttcccgctcatttgctttattaggtttgcaattatttaacgtaacaaattccatctaa 44500774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 264 - 393
Target Start/End: Complemental strand, 12796226 - 12796096
Alignment:
Q  264 ttatttattaattttgttacctctgcagcaatttaacctaattttttcccgctcatttgctttattatgtttgcaattatttaacctaacaaattccatc 363  Q
    ||||||||||||||| |||  | || ||||||||||||||||||||| ||||||||||| ||||||| |||||||||||||||| |||||||||||||||    
T  12796226 ttatttattaattttattaggtatgtagcaatttaacctaatttttttccgctcatttgttttattaggtttgcaattatttaatctaacaaattccatc 12796127  T
Q  364 taaaaa-atgcatcgcaccaatttcattcat 393  Q
    |||||| |||||||||||||| |||||||||    
T  12796126 taaaaatatgcatcgcaccaacttcattcat 12796096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 264 - 391
Target Start/End: Original strand, 7821519 - 7821647
Alignment:
Q  264 ttatttattaattttgttacctctgcagcaatttaacctaattttttcccgctcatttgctttattatgtttgcaattatttaacctaacaaattccatc 363  Q
    |||||||||||||||||||  |||| ||||||||||||||||||||| | ||||||||||||||||| ||||| ||||||||||||||  ||||| ||||    
T  7821519 ttatttattaattttgttaggtctggagcaatttaacctaattttttactgctcatttgctttattaggtttgtaattatttaacctacaaaatttcatc 7821618  T
Q  364 t-aaaaaatgcatcgcaccaatttcattc 391  Q
    | |||||||||||||||||||||||||||    
T  7821619 taaaaaaatgcatcgcaccaatttcattc 7821647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 264 - 393
Target Start/End: Original strand, 29967179 - 29967310
Alignment:
Q  264 ttatttattaattttgttacctctgcagcaatttaacctaattttttcccgctcatttgctttattatgtttgcaattatttaacctaacaaattccatc 363  Q
    |||||||||||||||||||  | |||||||| ||||||||||||||||||||||||||| |||||||  ||||||||||| |||||||||||||||||||    
T  29967179 ttatttattaattttgttaggtttgcagcaacttaacctaattttttcccgctcatttgttttattagatttgcaattatataacctaacaaattccatc 29967278  T
Q  364 t--aaaaaatgcatcgcaccaatttcattcat 393  Q
    |  ||||||||||| ||| |||||||||||||    
T  29967279 taaaaaaaatgcattgcatcaatttcattcat 29967310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 275 - 391
Target Start/End: Original strand, 8118608 - 8118725
Alignment:
Q  275 ttttgttacctctgcagcaatttaacctaattttttcccgctcatttgctttattatgtttgcaattatttaacctaacaaattccatct-aaaaaatgc 373  Q
    ||||||||  |||||| ||||||||||||||||||| ||||||||||||||||||| | ||||||||||||||||||||||||| ||||| |||||||||    
T  8118608 ttttgttaggtctgcaacaatttaacctaatttttttccgctcatttgctttattagggttgcaattatttaacctaacaaatttcatctaaaaaaatgc 8118707  T
Q  374 atcgcaccaatttcattc 391  Q
     |||||||||||||||||    
T  8118708 ttcgcaccaatttcattc 8118725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 264 - 391
Target Start/End: Complemental strand, 8397848 - 8397720
Alignment:
Q  264 ttatttattaattttgttacctctgcagcaatttaacctaattttttcccgctcatttgctttattatgtttgcaattatttaacctaacaaattccatc 363  Q
    |||||||||||||||||||  |||||||||||||||||||||||||| | |||| |||| ||||||| ||||||||||||||||| ||||||||| ||||    
T  8397848 ttatttattaattttgttaggtctgcagcaatttaacctaatttttttctgctcgtttgttttattaggtttgcaattatttaacttaacaaatttcatc 8397749  T
Q  364 taa-aaaatgcatcgcaccaatttcattc 391  Q
    ||| ||||||||| |||||| ||||||||    
T  8397748 taaaaaaatgcattgcaccattttcattc 8397720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 264 - 387
Target Start/End: Original strand, 36639345 - 36639469
Alignment:
Q  264 ttatttattaattttgttacctctgcagcaatttaacctaattttttcccgctcatttgctttattatgtttgcaattatttaacctaacaaattccatc 363  Q
    |||| ||||||||||||||  | |||||||||||||||||||||||||||| |||||| |||||||| | ||||||||||||||||||||||||| ||||    
T  36639345 ttatatattaattttgttaggtttgcagcaatttaacctaattttttcccgttcattttctttattaggattgcaattatttaacctaacaaatttcatc 36639444  T
Q  364 t-aaaaaatgcatcgcaccaatttc 387  Q
    | |||||||| ||||||||||||||    
T  36639445 taaaaaaatgtatcgcaccaatttc 36639469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 264 - 391
Target Start/End: Original strand, 47631360 - 47631488
Alignment:
Q  264 ttatttattaattttgttacctctgcagcaatttaacctaattttttcccgctcatttgctttattatgtttgcaattatttaacctaacaaattccatc 363  Q
    |||||||||||||||||||  | |||| |||||||||||||||| || | ||| ||||||||| ||| ||||||||||||||||||||||||||| ||||    
T  47631360 ttatttattaattttgttaggtatgcatcaatttaacctaatttatttctgctaatttgctttgttaggtttgcaattatttaacctaacaaatttcatc 47631459  T
Q  364 t-aaaaaatgcatcgcaccaatttcattc 391  Q
    | |||||||||||||||||||||||||||    
T  47631460 taaaaaaatgcatcgcaccaatttcattc 47631488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 264 - 391
Target Start/End: Original strand, 8118383 - 8118510
Alignment:
Q  264 ttatttattaattttgttacctctgcagcaatttaacctaattttttcccgctcatttgctttattatgtttgcaattatttaacctaacaaattccatc 363  Q
    |||||||||||||| ||||| |||||| ||||||||| ||||||||| | ||||||||||||||||| ||||||||||||||||||||||||||| ||||    
T  8118383 ttatttattaattt-gttacgtctgcaacaatttaacttaatttttttc-gctcatttgctttattaggtttgcaattatttaacctaacaaatttcatc 8118480  T
Q  364 t--aaaaaatgcatcgcaccaatttcattc 391  Q
    |  ||||||||||| |||||||||||||||    
T  8118481 taaaaaaaatgcattgcaccaatttcattc 8118510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 259 - 370
Target Start/End: Complemental strand, 28389882 - 28389771
Alignment:
Q  259 catctttatttattaattttgttacctctgcagcaatttaacctaattttttcccgctcatttgctttattatgtttgcaattatttaacctaacaaatt 358  Q
    |||| |||||||||||||||||||  | ||||| |||| | |||||| |||||||||||||||||||||||| ||||||| |||||||||||||||||||    
T  28389882 catcattatttattaattttgttaggtttgcagtaattcatcctaatattttcccgctcatttgctttattaggtttgcatttatttaacctaacaaatt 28389783  T
Q  359 ccatctaaaaaa 370  Q
    ||||||||||||    
T  28389782 ccatctaaaaaa 28389771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 264 - 389
Target Start/End: Original strand, 7809348 - 7809474
Alignment:
Q  264 ttatttattaattttgttacctctgcagcaatttaacctaattttttcccgctcatttgctttattatgtttgcaattatttaacctaacaaattccatc 363  Q
    ||||| |||||||||||||  | |||| ||||| ||||||||||||| | ||||||||||||||||| ||||| ||||||||||||||| ||||| ||||    
T  7809348 ttattcattaattttgttaggtatgcaacaattgaacctaatttttttctgctcatttgctttattaggtttgtaattatttaacctaaaaaatttcatc 7809447  T
Q  364 t-aaaaaatgcatcgcaccaatttcat 389  Q
    | |||||||||||||||||||||||||    
T  7809448 taaaaaaatgcatcgcaccaatttcat 7809474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 295 - 391
Target Start/End: Complemental strand, 21581351 - 21581253
Alignment:
Q  295 tttaacctaattttttcccgctcatttgctttattatgtttgcaattatttaacctaacaaattccatctaa-aaaatgca-tcgcaccaatttcattc 391  Q
    ||||||||||||||||| |||||||||||||||||| ||||||||||||||||||||||||||| ||||||| |||||||| |||||||||||||||||    
T  21581351 tttaacctaattttttctcgctcatttgctttattaggtttgcaattatttaacctaacaaatttcatctaaaaaaatgcattcgcaccaatttcattc 21581253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 274 - 391
Target Start/End: Original strand, 22292701 - 22292819
Alignment:
Q  274 attttgttacctctgcagcaatttaacctaattttttcccgctcatttgctttattatgtttgcaattatttaacctaacaaattccatcta-aaaaatg 372  Q
    |||||||||  ||||||  |||||||||||||||||| ||||||||||||||||||| |||||||||||||||||||||||||| ||||||| |||||||    
T  22292701 attttgttaggtctgcaataatttaacctaatttttttccgctcatttgctttattaggtttgcaattatttaacctaacaaataccatctagaaaaatg 22292800  T
Q  373 catcgcaccaatttcattc 391  Q
    ||| | | |||||||||||    
T  22292801 catggtatcaatttcattc 22292819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 69; E-Value: 8e-31
Query Start/End: Original strand, 264 - 393
Target Start/End: Original strand, 28813225 - 28813355
Alignment:
Q  264 ttatttattaattttgttacctctgcagcaatttaacctaattttttcccgctcatttgctttattatgtttgcaattatttaacctaacaaattccatc 363  Q
    |||||||||||||||||||  | | || |||||||| |||||||||||| ||||||||||||||||| ||||| |||||||||||| |||||||| ||||    
T  28813225 ttatttattaattttgttaggtttacaacaatttaatctaattttttcc-gctcatttgctttattaggtttgtaattatttaaccaaacaaatttcatc 28813323  T
Q  364 t--aaaaaatgcatcgcaccaatttcattcat 393  Q
    |  ||||||||||| |||||||||||||||||    
T  28813324 taaaaaaaatgcattgcaccaatttcattcat 28813355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 264 - 393
Target Start/End: Complemental strand, 28380077 - 28379956
Alignment:
Q  264 ttatttattaattttgttacctctgcagcaatttaacctaattttttcccgctcatttgctttattatgtttgcaattatttaacctaacaaattccatc 363  Q
    |||||||||||||||||||  |||||| |||||||||||||||||| |  ||||||||| ||||||| |||||||||||||||||||||||||||||       
T  28380077 ttatttattaattttgttaggtctgcaccaatttaacctaattttt-cttgctcatttgttttattaggtttgcaattatttaacctaacaaattcc--- 28379982  T
Q  364 taaaaaatgcatcgcaccaatttcattcat 393  Q
        ||||||||||||||||||||||||||    
T  28379981 ----aaatgcatcgcaccaatttcattcat 28379956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 264 - 370
Target Start/End: Complemental strand, 32010789 - 32010682
Alignment:
Q  264 ttatttattaattttgttacctctgcagcaatttaacctaattttttcccgctcatttgctttattatgtttgcaattatttaacct-aacaaattccat 362  Q
    |||||||||||||||||||| ||||||| ||||||| |||||||||| |||||||||| |||||||| ||||| |||||||| |||| ||||||||||||    
T  32010789 ttatttattaattttgttacgtctgcagtaatttaaactaatttttttccgctcattttctttattaggtttgtaattattttacctaaacaaattccat 32010690  T
Q  363 ctaaaaaa 370  Q
    ||||||||    
T  32010689 ctaaaaaa 32010682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 289 - 393
Target Start/End: Complemental strand, 43162006 - 43161898
Alignment:
Q  289 cagcaatttaacctaattttttcccgctcatttgctttattatgtttgcaattatttaacctaacaaattccatct----aaaaaatgcatcgcaccaat 384  Q
    |||||||||||| ||| |||||| |||||||||||||||||| ||||||||||||||||| ||||||||||||| |    ||||||||||| ||||||||    
T  43162006 cagcaatttaacttaactttttcacgctcatttgctttattaggtttgcaattatttaacttaacaaattccatttaaaaaaaaaatgcattgcaccaat 43161907  T
Q  385 ttcattcat 393  Q
    |||||||||    
T  43161906 ttcattcat 43161898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 306 - 391
Target Start/End: Complemental strand, 8479206 - 8479122
Alignment:
Q  306 tttttcccgctcatttgctttattatgtttgcaattatttaacctaacaaattccatctaaaaaatgcatcgcaccaatttcattc 391  Q
    ||||| |||||||||||||||||||  |||||||||||| ||||||||||||| ||||||||||||||||||||||||||||||||    
T  8479206 ttttttccgctcatttgctttattagatttgcaattatt-aacctaacaaatttcatctaaaaaatgcatcgcaccaatttcattc 8479122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 264 - 391
Target Start/End: Original strand, 47631539 - 47631667
Alignment:
Q  264 ttatttattaattttgttacctctgcagcaatttaacctaattttttcccgctcatttgctttattatgtttgcaattatttaacctaacaaattccatc 363  Q
    ||||||||||||||||| |  |||||| |||||||||||||||| |||  |||| |||||||||||| ||||||||||||||||||||||||||| ||||    
T  47631539 ttatttattaattttgtcaggtctgcatcaatttaacctaatttattct-gctcttttgctttattaggtttgcaattatttaacctaacaaatt-catc 47631636  T
Q  364 ---taaaaaatgcatcgcaccaatttcattc 391  Q
        |||||||||||||| ||||||||||||    
T  47631637 caaaaaaaaatgcatcgccccaatttcattc 47631667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 272 - 390
Target Start/End: Complemental strand, 47428513 - 47428394
Alignment:
Q  272 taattttgttacctctgcagcaatttaacctaattttttcccgctcatttgctttattatgtttgcaattatttaacctaacaaattccatctaa-aaaa 370  Q
    |||||||||||| | |||||||| |||||||||| ||||||| | |||||| | ||||| ||| ||| | ||||||||||||||||||||||||| ||||    
T  47428513 taattttgttacatatgcagcaacttaacctaatattttccctcccatttgttgtattaggttagcagtaatttaacctaacaaattccatctaaaaaaa 47428414  T
Q  371 tgcatcgcaccaatttcatt 390  Q
    |||||| |||||||||||||    
T  47428413 tgcatctcaccaatttcatt 47428394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 293 - 386
Target Start/End: Original strand, 7809561 - 7809655
Alignment:
Q  293 aatttaacctaattttttcccgctcatttgctttattatgtttgcaattatttaacctaacaaattccatct-aaaaaatgcatcgcaccaattt 386  Q
    |||||||||||||||||| | |||||||||||||||||  |||| ||||||||||||||| ||||| ||||| ||||||||||||||||||||||    
T  7809561 aatttaacctaatttttttctgctcatttgctttattagatttgtaattatttaacctaaaaaatttcatctaaaaaaatgcatcgcaccaattt 7809655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 259 - 391
Target Start/End: Original strand, 8079013 - 8079146
Alignment:
Q  259 catctttatttattaattttgttacctctgcagcaatttaacctaatttttt-cccgctcatttgctttattatgtttgcaattatttaacctaacaaat 357  Q
    |||| |||||||||||||||||||  |||| |||||||||| |||||||||| |||||||||||| | ||||| ||| ||| |  |||||||||||||||    
T  8079013 catcattatttattaattttgttagttctggagcaatttaagctaattttttccccgctcatttgttgtattaggttagcagtagtttaacctaacaaat 8079112  T
Q  358 tccatctaaaaa-atgcatcgcaccaatttcattc 391  Q
    |||||||||||| |||||| |||||||||| ||||    
T  8079113 tccatctaaaaagatgcat-gcaccaattttattc 8079146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 296 - 370
Target Start/End: Original strand, 8079327 - 8079401
Alignment:
Q  296 ttaacctaattttttcccgctcatttgctttattatgtttgcaattatttaacctaacaaattccatctaaaaaa 370  Q
    |||||||||||||||||  ||||||  |||||||| |||||||||||||||||||||||||||||||||||||||    
T  8079327 ttaacctaattttttcctactcattacctttattaggtttgcaattatttaacctaacaaattccatctaaaaaa 8079401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 267 - 335
Target Start/End: Original strand, 15456295 - 15456363
Alignment:
Q  267 tttattaattttgttacctctgcagcaatttaacctaattttttcccgctcatttgctttattatgttt 335  Q
    ||||||||||||||||  |||||||||||||||||||||||| |||| |||||||||||||||| ||||    
T  15456295 tttattaattttgttaggtctgcagcaatttaacctaattttatcccactcatttgctttattaggttt 15456363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 267 - 335
Target Start/End: Original strand, 15463679 - 15463747
Alignment:
Q  267 tttattaattttgttacctctgcagcaatttaacctaattttttcccgctcatttgctttattatgttt 335  Q
    ||||||||||||||||  |||||||||||||||||||||||| |||| |||||||||||||||| ||||    
T  15463679 tttattaattttgttaggtctgcagcaatttaacctaattttatcccactcatttgctttattaggttt 15463747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 264 - 322
Target Start/End: Original strand, 24046065 - 24046123
Alignment:
Q  264 ttatttattaattttgttacctctgcagcaatttaacctaattttttcccgctcatttg 322  Q
    |||||||||||||||||||  | ||||||||||||||||||||||||||||||||||||    
T  24046065 ttatttattaattttgttaggtgtgcagcaatttaacctaattttttcccgctcatttg 24046123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 318 - 391
Target Start/End: Original strand, 24049337 - 24049411
Alignment:
Q  318 atttgctttattatgtttgcaattatttaacctaacaaattccatct-aaaaaatgcatcgcaccaatttcattc 391  Q
    ||||||||||||| ||||||||||||||||||| ||||||| ||||| |||||||||||||||| | ||||||||    
T  24049337 atttgctttattaggtttgcaattatttaacctgacaaatttcatctaaaaaaatgcatcgcactagtttcattc 24049411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 269 - 367
Target Start/End: Original strand, 8078897 - 8078997
Alignment:
Q  269 tattaattttgttacctctgcagcaatttaacctaatttttt-cccgctca-tttgctttattatgtttgcaattatttaacctaacaaattccatctaa 366  Q
    ||||||||||||||  |||| |||||||||| |||||||||| |||||||| ||| || ||||||||| ||| |  ||||||||||||||||||||||||    
T  8078897 tattaattttgttaggtctgtagcaatttaagctaattttttccccgctcattttactgtattatgttagcagtagtttaacctaacaaattccatctaa 8078996  T
Q  367 a 367  Q
    |    
T  8078997 a 8078997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 258 - 393
Target Start/End: Complemental strand, 7526556 - 7526420
Alignment:
Q  258 acatctttatttattaattttgttacctctgcagcaatttaacctaattttttcccgctcatttgctttattatgtttgcaattatttaacctaacaaat 357  Q
    ||||| || ||||| |||||| |||  |||||||||| ||||||||||  |||||| || |  ||||  | || ||| ||| | ||||||||||||||||    
T  7526556 acatccttgtttatcaattttattaggtctgcagcaacttaacctaataatttccctctaaaatgctgaagtaggttagcagtaatttaacctaacaaat 7526457  T
Q  358 tccatctaaaaa-atgcatcgcaccaatttcattcat 393  Q
    |||||||||||| ||||||| || |||||||||||||    
T  7526456 tccatctaaaaatatgcatcacatcaatttcattcat 7526420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 327 - 391
Target Start/End: Complemental strand, 41852188 - 41852121
Alignment:
Q  327 attatgtttgcaattatttaacctaacaaattccatctaa--aaaatgca-tcgcaccaatttcattc 391  Q
    |||| ||||||||||||||||||||||||||| |||||||  |||||||| |||||||||||||||||    
T  41852188 attaggtttgcaattatttaacctaacaaatttcatctaaaaaaaatgcattcgcaccaatttcattc 41852121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 264 - 313
Target Start/End: Original strand, 2526941 - 2526990
Alignment:
Q  264 ttatttattaattttgttacctctgcagcaatttaacctaattttttccc 313  Q
    |||||||||||||||| ||  |||||||||||||||||||||||||||||    
T  2526941 ttatttattaattttggtaggtctgcagcaatttaacctaattttttccc 2526990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 264 - 309
Target Start/End: Complemental strand, 23952658 - 23952613
Alignment:
Q  264 ttatttattaattttgttacctctgcagcaatttaacctaattttt 309  Q
    |||||||||||||||||||| ||||||| |||||||||||||||||    
T  23952658 ttatttattaattttgttacgtctgcagtaatttaacctaattttt 23952613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 264 - 309
Target Start/End: Complemental strand, 23952706 - 23952661
Alignment:
Q  264 ttatttattaattttgttacctctgcagcaatttaacctaattttt 309  Q
    |||||||||||||||||||| ||||||| |||||||||||||||||    
T  23952706 ttatttattaattttgttacgtctgcagtaatttaacctaattttt 23952661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 264 - 310
Target Start/End: Original strand, 8079456 - 8079502
Alignment:
Q  264 ttatttattaattttgttacctctgcagcaatttaacctaatttttt 310  Q
    |||||||||||||||||||| ||||||||| ||||||||||| ||||    
T  8079456 ttatttattaattttgttacgtctgcagcagtttaacctaatatttt 8079502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 221 - 261
Target Start/End: Complemental strand, 712005 - 711965
Alignment:
Q  221 tgtacaatggggtgtatgagtaaagggtgttcatgtaacat 261  Q
    |||||||| |||||||||| |||||||||||||||||||||    
T  712005 tgtacaatagggtgtatgattaaagggtgttcatgtaacat 711965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 221 - 261
Target Start/End: Original strand, 1771321 - 1771361
Alignment:
Q  221 tgtacaatggggtgtatgagtaaagggtgttcatgtaacat 261  Q
    |||||||||||||||| || |||||||||||||||||||||    
T  1771321 tgtacaatggggtgtaggaataaagggtgttcatgtaacat 1771361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 221 - 261
Target Start/End: Original strand, 3756301 - 3756341
Alignment:
Q  221 tgtacaatggggtgtatgagtaaagggtgttcatgtaacat 261  Q
    |||||||| |||||||||| |||||||||||||||||||||    
T  3756301 tgtacaatagggtgtatgattaaagggtgttcatgtaacat 3756341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 221 - 261
Target Start/End: Complemental strand, 28988518 - 28988478
Alignment:
Q  221 tgtacaatggggtgtatgagtaaagggtgttcatgtaacat 261  Q
    ||||||||| ||||||||| |||||||||||||||||||||    
T  28988518 tgtacaatgaggtgtatgaataaagggtgttcatgtaacat 28988478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 264 - 320
Target Start/End: Complemental strand, 18002170 - 18002111
Alignment:
Q  264 ttatttattaattttgttacc---tctgcagcaatttaacctaattttttcccgctcatt 320  Q
    |||||||||||||||||||     |||||| ||| |||||||||||||||||||||||||    
T  18002170 ttatttattaattttgttattaggtctgcaacaagttaacctaattttttcccgctcatt 18002111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 264 - 313
Target Start/End: Complemental strand, 47428347 - 47428298
Alignment:
Q  264 ttatttattaattttgttacctctgcagcaatttaacctaattttttccc 313  Q
    |||||||||||||||||||  ||| || |||||||||||||| |||||||    
T  47428347 ttatttattaattttgttagatctacaacaatttaacctaatattttccc 47428298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 221 - 261
Target Start/End: Original strand, 960925 - 960965
Alignment:
Q  221 tgtacaatggggtgtatgagtaaagggtgttcatgtaacat 261  Q
    |||||||| | |||||||| |||||||||||||||||||||    
T  960925 tgtacaatagagtgtatgattaaagggtgttcatgtaacat 960965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 221 - 261
Target Start/End: Original strand, 17619207 - 17619247
Alignment:
Q  221 tgtacaatggggtgtatgagtaaagggtgttcatgtaacat 261  Q
    |||||||| |||||||||| |||| ||||||||||||||||    
T  17619207 tgtacaatagggtgtatgattaaaaggtgttcatgtaacat 17619247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 221 - 261
Target Start/End: Complemental strand, 32728402 - 32728362
Alignment:
Q  221 tgtacaatggggtgtatgagtaaagggtgttcatgtaacat 261  Q
    |||||||| |||||||||| |||||| ||||||||||||||    
T  32728402 tgtacaatagggtgtatgattaaaggatgttcatgtaacat 32728362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 221 - 261
Target Start/End: Complemental strand, 41878451 - 41878411
Alignment:
Q  221 tgtacaatggggtgtatgagtaaagggtgttcatgtaacat 261  Q
    ||||||||| ||||||||| ||||| |||||||||||||||    
T  41878451 tgtacaatgaggtgtatgaataaagagtgttcatgtaacat 41878411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 221 - 261
Target Start/End: Original strand, 43514741 - 43514781
Alignment:
Q  221 tgtacaatggggtgtatgagtaaagggtgttcatgtaacat 261  Q
    |||||||||| ||||| || |||||||||||||||||||||    
T  43514741 tgtacaatggagtgtaggaataaagggtgttcatgtaacat 43514781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 221 - 261
Target Start/End: Original strand, 46827761 - 46827801
Alignment:
Q  221 tgtacaatggggtgtatgagtaaagggtgttcatgtaacat 261  Q
    |||||||| | |||||||| |||||||||||||||||||||    
T  46827761 tgtacaatagagtgtatgattaaagggtgttcatgtaacat 46827801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 221 - 261
Target Start/End: Original strand, 55966401 - 55966441
Alignment:
Q  221 tgtacaatggggtgtatgagtaaagggtgttcatgtaacat 261  Q
    ||||||||||| ||||||| ||||||||||| |||||||||    
T  55966401 tgtacaatgggatgtatgaataaagggtgtttatgtaacat 55966441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 107; Significance: 2e-53; HSPs: 64)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 264 - 393
Target Start/End: Original strand, 51113906 - 51114036
Alignment:
Q  264 ttatttattaattttgttacctctgcagcaatttaacctaattttttcccgctcatttgctttattatgtttgcaattatttaacctaacaaattccatc 363  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||||| |||||| |||||||| ||||||||||||||||||||||||||||||||    
T  51113906 ttatttattaattttgttacgtctgcagcaatttaacctaattttttcccgttcatttactttattaggtttgcaattatttaacctaacaaattccatc 51114005  T
Q  364 t-aaaaaatgcatcgcaccaatttcattcat 393  Q
    | |||||||||||||||||||||||||||||    
T  51114006 taaaaaaatgcatcgcaccaatttcattcat 51114036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 106; E-Value: 6e-53
Query Start/End: Original strand, 264 - 393
Target Start/End: Original strand, 27296162 - 27296291
Alignment:
Q  264 ttatttattaattttgttacctctgcagcaatttaacctaattttttcccgctcatttgctttattatgtttgcaattatttaacctaacaaattccatc 363  Q
    |||||||||||||||||||| |||||| |||||||||||||||||| |||||| ||||||||||||| ||||||||||||||||||||| ||||||||||    
T  27296162 ttatttattaattttgttacgtctgcaacaatttaacctaatttttccccgcttatttgctttattaggtttgcaattatttaacctaataaattccatc 27296261  T
Q  364 taaaaaatgcatcgcaccaatttcattcat 393  Q
    ||||||||||||||||||||||||||||||    
T  27296262 taaaaaatgcatcgcaccaatttcattcat 27296291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 264 - 391
Target Start/End: Original strand, 318555 - 318683
Alignment:
Q  264 ttatttattaattttgttacctctgcagcaatttaacctaattttttcccgctcatttgctttattatgtttgcaattatttaacctaacaaattccatc 363  Q
    |||||||||||||||||||| ||||||||||||||| |||||||||| ||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  318555 ttatttattaattttgttacgtctgcagcaatttaatctaatttttttccgctcatttgctttattaggtttgcaattatttaacctaacaaattccatc 318654  T
Q  364 t-aaaaaatgcatcgcaccaatttcattc 391  Q
    | |||||||||||||||||||||||||||    
T  318655 taaaaaaatgcatcgcaccaatttcattc 318683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 264 - 391
Target Start/End: Complemental strand, 1156171 - 1156043
Alignment:
Q  264 ttatttattaattttgttacctctgcagcaatttaacctaattttttcccgctcatttgctttattatgtttgcaattatttaacctaacaaattccatc 363  Q
    |||||||||||| |||||||  ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  1156171 ttatttattaatattgttacggctgcagcaatttaacctaattttttcccgctcatttgctttattaggtttgcaattatttaacctaacaaattccatc 1156072  T
Q  364 taa-aaaatgcatcgcaccaatttcattc 391  Q
    ||| |||||||||||||||||||||||||    
T  1156071 taaaaaaatgcatcgcaccaatttcattc 1156043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 264 - 391
Target Start/End: Original strand, 44263089 - 44263217
Alignment:
Q  264 ttatttattaattttgttacctctgcagcaatttaacctaattttttcccgctcatttgctttattatgtttgcaattatttaacctaacaaattccatc 363  Q
    |||||||||||||||||||  |||||||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||||    
T  44263089 ttatttattaattttgttaagtctgcagcaatttaacctaattttttcccgttcatttgctttattaggtttgcaattatttaacctaacaaattccatc 44263188  T
Q  364 t-aaaaaatgcatcgcaccaatttcattc 391  Q
    | |||||||||||||||||||||||||||    
T  44263189 taaaaaaatgcatcgcaccaatttcattc 44263217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 264 - 391
Target Start/End: Original strand, 5428528 - 5428655
Alignment:
Q  264 ttatttattaattttgttacctctgcagcaatttaacctaattttttcccgctcatttgctttattatgtttgcaattatttaacctaacaaattccatc 363  Q
    |||||||||||||||||||  |||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||||||||||||| ||||    
T  5428528 ttatttattaattttgttaggtctgcagcaatttaacctaatttttttccgctcatttgctttattaggtttgcaattatttaacctaacaaatttcatc 5428627  T
Q  364 taaaaaatgcatcgcaccaatttcattc 391  Q
    |||||||||| |||||||||||||||||    
T  5428628 taaaaaatgcttcgcaccaatttcattc 5428655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 103; E-Value: 4e-51
Query Start/End: Original strand, 264 - 391
Target Start/End: Complemental strand, 42492271 - 42492142
Alignment:
Q  264 ttatttattaattttgttacctctgcagcaatttaacctaattttttcccgctcatttgctttattatgtttgcaattatttaacctaacaaattccatc 363  Q
    |||||||||||||||||||  ||||||||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||||||||||    
T  42492271 ttatttattaattttgttaggtctgcagcaatttaacctaattttttcccactcatttgctttattaggtttgcaattatttaacctaacaaattccatc 42492172  T
Q  364 taa--aaaatgcatcgcaccaatttcattc 391  Q
    |||  |||||||||||||||||||||||||    
T  42492171 taaaaaaaatgcatcgcaccaatttcattc 42492142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 260 - 385
Target Start/End: Original strand, 44262660 - 44262785
Alignment:
Q  260 atctttatttattaattttgttacctctgcagcaatttaacctaattttttcccgctcatttgctttattatgtttgcaattatttaacctaacaaattc 359  Q
    |||||||||||||||||||||||  |||||||||||||||||||||||||| || |||||||||||||||| ||||||||||||||||||||||||||||    
T  44262660 atctttatttattaattttgttaggtctgcagcaatttaacctaatttttttccactcatttgctttattacgtttgcaattatttaacctaacaaattc 44262759  T
Q  360 catctaaaaaatgcatcgcaccaatt 385  Q
    ||||||||||||||| ||||||||||    
T  44262760 catctaaaaaatgcaacgcaccaatt 44262785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 99; E-Value: 9e-49
Query Start/End: Original strand, 264 - 381
Target Start/End: Original strand, 51114090 - 51114208
Alignment:
Q  264 ttatttattaattttgttacctctgcagcaatttaacctaattttttcccgctcatttgctttattatgtttgcaattatttaacctaacaaattccatc 363  Q
    |||||||||||||||||||| |||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  51114090 ttatttattaattttgttacgtctgtagcaatttaacctaattttttcccgctcatttgctttattaggtttgcaattatttaacctaacaaattccatc 51114189  T
Q  364 t-aaaaaatgcatcgcacc 381  Q
    | |||||||||||||||||    
T  51114190 taaaaaaatgcatcgcacc 51114208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 96; E-Value: 6e-47
Query Start/End: Original strand, 264 - 390
Target Start/End: Original strand, 38684015 - 38684142
Alignment:
Q  264 ttatttattaattttgttacctctgcagcaatttaacctaattttttcccgctcatttgctttattatgtttgcaattatttaacctaacaaattccatc 363  Q
    |||||||||||||||||||  | |||||||||||||||||||||||| ||||||||||||||||||| |||||| |||||||||||||||||||||||||    
T  38684015 ttatttattaattttgttaggtttgcagcaatttaacctaatttttttccgctcatttgctttattaggtttgcgattatttaacctaacaaattccatc 38684114  T
Q  364 t-aaaaaatgcatcgcaccaatttcatt 390  Q
    | ||||||||||||||||||||||||||    
T  38684115 taaaaaaatgcatcgcaccaatttcatt 38684142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 264 - 391
Target Start/End: Complemental strand, 16165792 - 16165663
Alignment:
Q  264 ttatttattaattttgttacctctgcagcaatttaacctaattttttcccgctcatttgctttattatgtttgcaattatttaacctaacaaattccatc 363  Q
    |||||||||||||||||||  |||| ||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||| ||||    
T  16165792 ttatttattaattttgttaggtctgtagcaatttaacctaattttttcccgatcatttgctttattaggtttgcaattatttaacctaacaaatttcatc 16165693  T
Q  364 taa--aaaatgcatcgcaccaatttcattc 391  Q
    |||  |||||||||||||||||||||||||    
T  16165692 taaaaaaaatgcatcgcaccaatttcattc 16165663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 264 - 391
Target Start/End: Original strand, 51113723 - 51113852
Alignment:
Q  264 ttatttattaattttgttacctctgcagcaatttaacctaattttttcccgctcatttgctttattatgtttgcaattatttaacctaacaaattccatc 363  Q
    |||||||||||||||||||| | |||||||||||||||||||||||| |||||||||||||||||||  |||||||||||||||||||||||||| ||||    
T  51113723 ttatttattaattttgttacgtttgcagcaatttaacctaatttttttccgctcatttgctttattagatttgcaattatttaacctaacaaatttcatc 51113822  T
Q  364 t--aaaaaatgcatcgcaccaatttcattc 391  Q
    |  |||||||||||||||||||||||||||    
T  51113823 taaaaaaaatgcatcgcaccaatttcattc 51113852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 93; E-Value: 4e-45
Query Start/End: Original strand, 264 - 391
Target Start/End: Original strand, 27296337 - 27296465
Alignment:
Q  264 ttatttattaattttgttacctctgcagcaatttaacctaattttttcccgctcatttgctttattatgtttgcaattatttaacctaacaaattccatc 363  Q
    |||||||||||||||||||| |||||| |||||||||||||||||||| ||||||||| |||||||| ||||||||||||||||||||||||||| ||||    
T  27296337 ttatttattaattttgttacgtctgcaacaatttaacctaattttttctcgctcattttctttattaggtttgcaattatttaacctaacaaatttcatc 27296436  T
Q  364 ta-aaaaatgcatcgcaccaatttcattc 391  Q
    || |||||| |||||||||||||||||||    
T  27296437 tataaaaatacatcgcaccaatttcattc 27296465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 260 - 390
Target Start/End: Original strand, 21617752 - 21617883
Alignment:
Q  260 atctttatttattaattttgttacctctgcagcaatttaacctaattttttcccgctcatttgctttattatgtttgcaattatttaacctaacaaattc 359  Q
    ||||||||| |||||||||||||  ||||||  |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||     
T  21617752 atctttattcattaattttgttaggtctgcattaatttaacctaattttttcccgctcatttgctttattaggtttgcaattatttaacctaacaaattt 21617851  T
Q  360 catct-aaaaaatgcatcgcaccaatttcatt 390  Q
    ||||| |||||||||||||||| |||||||||    
T  21617852 catctaaaaaaatgcatcgcactaatttcatt 21617883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 89; E-Value: 9e-43
Query Start/End: Original strand, 264 - 391
Target Start/End: Complemental strand, 42497397 - 42497267
Alignment:
Q  264 ttatttattaattttgttacctctgcagcaatttaacctaattttttcccgctcatttgctttattatgtttgcaattatttaacctaacaaattccatc 363  Q
    |||||||||||||||| ||  |||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||||||||||||| ||||    
T  42497397 ttatttattaattttgataggtctgcagcaatttaacctaatttttttccgctcatttgctttattaggtttgcaattatttaacctaacaaatttcatc 42497298  T
Q  364 t---aaaaaatgcatcgcaccaatttcattc 391  Q
    |   ||||||||||| |||||||||||||||    
T  42497297 tgaaaaaaaatgcattgcaccaatttcattc 42497267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 264 - 391
Target Start/End: Complemental strand, 3227328 - 3227200
Alignment:
Q  264 ttatttattaattttgttacctctgcagcaatttaacctaattttttcccgctcatttgctttattatgtttgcaattatttaacctaacaaattccatc 363  Q
    |||||||||||||||||||  |||||| ||||||||||||||||||| | ||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  3227328 ttatttattaattttgttagatctgcatcaatttaacctaatttttttc-gctcatttgctttattaggtttgcaattatttaacctaacaaattccatc 3227230  T
Q  364 taa--aaaatgcatcgcaccaatttcattc 391  Q
    |||  ||||||||| |||||||||||||||    
T  3227229 taaaaaaaatgcattgcaccaatttcattc 3227200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 264 - 391
Target Start/End: Original strand, 52740700 - 52740829
Alignment:
Q  264 ttatttattaattttgttacctctgcagcaatttaacctaattttttcccgctcatttgctttattatgtttgcaattatttaacctaacaaattccatc 363  Q
    |||||||||||||||||||  | || ||||||||||||||||||||||||||||||||||||||||| |||| |||||||||||| |||||||||| |||    
T  52740700 ttatttattaattttgttaggtttgaagcaatttaacctaattttttcccgctcatttgctttattaggtttacaattatttaacttaacaaattcaatc 52740799  T
Q  364 t--aaaaaatgcatcgcaccaatttcattc 391  Q
    |  |||||||||||||||||||||||||||    
T  52740800 taaaaaaaatgcatcgcaccaatttcattc 52740829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 264 - 368
Target Start/End: Complemental strand, 42497039 - 42496935
Alignment:
Q  264 ttatttattaattttgttacctctgcagcaatttaacctaattttttcccgctcatttgctttattatgtttgcaattatttaacctaacaaattccatc 363  Q
    |||||||||||||||||||  |||||||||||||||||||||||||||||||||||||| |||||||  |||||||||||||||||||||||||||||||    
T  42497039 ttatttattaattttgttaggtctgcagcaatttaacctaattttttcccgctcatttgttttattagatttgcaattatttaacctaacaaattccatc 42496940  T
Q  364 taaaa 368  Q
    |||||    
T  42496939 taaaa 42496935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 264 - 390
Target Start/End: Original strand, 1647543 - 1647670
Alignment:
Q  264 ttatttattaattttgttacctctgcagcaatttaacctaattttttcccgctcatttgctttattatgtttgcaattatttaacctaacaaattccatc 363  Q
    |||||||||||||||||||  ||||||||| |||||||||| ||||| | ||||||||||||||||| ||||| ||||||||||||||||||||| ||||    
T  1647543 ttatttattaattttgttaggtctgcagcagtttaacctaagttttttctgctcatttgctttattaggtttggaattatttaacctaacaaatttcatc 1647642  T
Q  364 t-aaaaaatgcatcgcaccaatttcatt 390  Q
    | |||||||| |||||||||||||||||    
T  1647643 taaaaaaatgaatcgcaccaatttcatt 1647670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 265 - 391
Target Start/End: Complemental strand, 4100691 - 4100565
Alignment:
Q  265 tatttattaattttgttacctctgcagcaatttaacctaatttttt-cccgctcatttgctttattatgtttgcaattatttaacctaacaaattccatc 363  Q
    ||||||||||||||||||  ||||||| |||||||||||||||||| |||||||||||| ||||||| ||||||||||||||||| ||||||||| |||     
T  4100691 tatttattaattttgttaggtctgcagtaatttaacctaatttttttcccgctcatttgttttattaagtttgcaattatttaacttaacaaatttcata 4100592  T
Q  364 taaaaaatgcatcgcaccaatttcattc 391  Q
    ||||||| ||||||||||||||||||||    
T  4100591 taaaaaa-gcatcgcaccaatttcattc 4100565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 264 - 390
Target Start/End: Original strand, 44263310 - 44263437
Alignment:
Q  264 ttatttattaattttgttacctctgcagcaatttaacctaattttttcccgctcatttgctttattatgtttgcaattatttaacctaacaaattccatc 363  Q
    |||||||||||||||||||  |||||| |||| ||||||||||||||| ||||||||||| |||||| ||||||||||||||||||||||||||| ||||    
T  44263310 ttatttattaattttgttaggtctgcatcaatataacctaattttttctcgctcatttgccttattaggtttgcaattatttaacctaacaaattacatc 44263409  T
Q  364 -taaaaaatgcatcgcaccaatttcatt 390  Q
      ||||||||||||||| ||||||||||    
T  44263410 gaaaaaaatgcatcgcatcaatttcatt 44263437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 264 - 376
Target Start/End: Original strand, 5428933 - 5429046
Alignment:
Q  264 ttatttattaattttgttacctctgcagcaatttaacctaattttttcccgctcatttgctttattatgtttgcaattatttaacctaacaaattccatc 363  Q
    |||||||||||||||||||  ||||||||||||||| |||||||||| |||||||| |||||||||| |||||||||||||||| |||||||||||||||    
T  5428933 ttatttattaattttgttagatctgcagcaatttaaactaatttttttccgctcatctgctttattaggtttgcaattatttaagctaacaaattccatc 5429032  T
Q  364 taaaa-aatgcatc 376  Q
    ||||| ||||||||    
T  5429033 taaaataatgcatc 5429046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 259 - 391
Target Start/End: Original strand, 5429043 - 5429180
Alignment:
Q  259 catctttatttattaattttgttacctctgcagcaatttaacctaatttttt----cccgctcatttgctttattatgtttgcaattatttaacctaaca 354  Q
    |||| ||||||||||| |||||||  | ||||||||||||||||||||| ||    |||||||| ||||||||||| |||||||||||||||||||||||    
T  5429043 catccttatttattaactttgttaggtgtgcagcaatttaacctaatttattttcccccgctcaattgctttattaggtttgcaattatttaacctaaca 5429142  T
Q  355 aattccatct-aaaaaatgcatcgcaccaatttcattc 391  Q
    |||||||||| ||||||||||| |||||||||||||||    
T  5429143 aattccatctaaaaaaatgcatagcaccaatttcattc 5429180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 268 - 391
Target Start/End: Complemental strand, 6537757 - 6537629
Alignment:
Q  268 ttattaattttgttacctctgcagcaatttaacctaattttttcccgctcatttgctttattatgtttgcaattatttaacctaacaaattccatctaaa 367  Q
    |||||||||||||||  || ||| ||||||||| |||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||    
T  6537757 ttattaattttgttaggtcagcaacaatttaacttaattttttcccgctcatttactttattaggtttgcaattatttaacctaacaaattccatctaaa 6537658  T
Q  368 aa-----atgcatcgcaccaatttcattc 391  Q
    ||     |||||| |||||||||||||||    
T  6537657 aaaatgcatgcatggcaccaatttcattc 6537629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 266 - 391
Target Start/End: Complemental strand, 28950274 - 28950148
Alignment:
Q  266 atttattaattttgttacctctgcagcaatttaacctaattttttcccgctcatttgctttattatgtttgcaattatttaacctaacaaattccatcta 365  Q
    |||||||||||||||||| || ||| ||||||||| ||||||||| |||| ||||||||||||||  |||| ||||||||||||||||||||| ||||||    
T  28950274 atttattaattttgttacgtccgcaacaatttaacttaatttttttccgcacatttgctttattagatttgaaattatttaacctaacaaatttcatcta 28950175  T
Q  366 a-aaaatgcatcgcaccaatttcattc 391  Q
    | |||||||||| ||||||||||||||    
T  28950174 aaaaaatgcatctcaccaatttcattc 28950148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 74; E-Value: 8e-34
Query Start/End: Original strand, 264 - 391
Target Start/End: Original strand, 18912327 - 18912456
Alignment:
Q  264 ttatttattaattttgttacctctgcagcaatttaacctaattttttcccgctcatttgctttattatgtttg-caattatttaacctaacaaattccat 362  Q
    |||||||||||||||||||  |||||||||||||||||||||||||| |||| |||||||||||||| |||||  ||||||||||| ||||||||| |||    
T  18912327 ttatttattaattttgttatgtctgcagcaatttaacctaatttttttccgcccatttgctttattaggtttgtaaattatttaacttaacaaatttcat 18912426  T
Q  363 ct-aaaaaatgcatcgcaccaatttcattc 391  Q
    || ||||||||||| ||| |||||||||||    
T  18912427 ctaaaaaaatgcatagcatcaatttcattc 18912456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 264 - 352
Target Start/End: Complemental strand, 28950365 - 28950277
Alignment:
Q  264 ttatttattaattttgttacctctgcagcaatttaacctaattttttcccgctcatttgctttattatgtttgcaattatttaacctaa 352  Q
    |||||||||||||||||||| ||| |||||||||||||||||||||||||||| ||||||||||||| |||||||||||||||||||||    
T  28950365 ttatttattaattttgttacgtctccagcaatttaacctaattttttcccgctaatttgctttattaggtttgcaattatttaacctaa 28950277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 264 - 390
Target Start/End: Complemental strand, 42497574 - 42497448
Alignment:
Q  264 ttatttattaattttgttacctctgcagcaatttaacctaattttttcccgctcatttgctttattatgtttgcaattatttaacctaacaaattccatc 363  Q
    |||||||||||||||||||  ||||||| |||||||| |||||||||  |||||||||  ||||||| ||||| ||||||||||| ||||||||| |||     
T  42497574 ttatttattaattttgttaggtctgcagtaatttaacttaattttttttcgctcatttattttattaggtttgtaattatttaacttaacaaatttcatt 42497475  T
Q  364 taaaaaatgcatcgcaccaatttcatt 390  Q
    ||||||||| |||||||||||||||||    
T  42497474 taaaaaatgtatcgcaccaatttcatt 42497448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 264 - 370
Target Start/End: Complemental strand, 51272598 - 51272492
Alignment:
Q  264 ttatttattaattttgttacctctgcagcaatttaacctaattttttcccgctcatttgctttattatgtttgcaattatttaacctaacaaattccatc 363  Q
    |||||||||||||||||||  ||| || ||||||||||||||||||| | ||||||||||||||||| ||||||||||||||||||||| ||||||||||    
T  51272598 ttatttattaattttgttaggtctacaacaatttaacctaatttttttctgctcatttgctttattaggtttgcaattatttaacctaataaattccatc 51272499  T
Q  364 taaaaaa 370  Q
     ||||||    
T  51272498 aaaaaaa 51272492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 266 - 386
Target Start/End: Complemental strand, 28949995 - 28949875
Alignment:
Q  266 atttattaattttgttacctctgcagcaatttaacctaattttttcccgctcatttgctttattatgtttgcaattatttaacctaacaaattccatct- 364  Q
    |||||||||||||||||| |||| ||| |||||||||||||||| ||||| |||||||||||||| ||||| ||||||||||||||||||||| ||| |     
T  28949995 atttattaattttgttacgtctgaagctatttaacctaattttt-cccgcacatttgctttattaggtttgtaattatttaacctaacaaatttcatata 28949897  T
Q  365 aaaaaatgcatcgcaccaattt 386  Q
    ||||||||||||||| ||||||    
T  28949896 aaaaaatgcatcgcatcaattt 28949875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 272 - 390
Target Start/End: Complemental strand, 4100890 - 4100771
Alignment:
Q  272 taattttgttacctctgcagcaatttaacctaattttttcccgctcatttgctttattatgtttgcaattatttaacctaacaaattccatctaa-aaaa 370  Q
    |||||||||||  ||||||||||||||| |||||||||| ||||||||| | |||||||  |||||||||||||||||||| ||||| ||||||| ||||    
T  4100890 taattttgttaggtctgcagcaatttaatctaatttttttccgctcattagttttattagatttgcaattatttaacctaaaaaatttcatctaaaaaaa 4100791  T
Q  371 tgcatcgcaccaatttcatt 390  Q
    || |||||||||||||||||    
T  4100790 tggatcgcaccaatttcatt 4100771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 293 - 391
Target Start/End: Complemental strand, 44099747 - 44099650
Alignment:
Q  293 aatttaacctaattttttcccgctcatttgctttattatgtttgcaattatttaacctaacaaattccatctaaaaaatgcatcgcaccaatttcattc 391  Q
    ||||||||||||||||||  |||||||||||||||||| ||||||||||||||||||||| ||||| ||||| |||||||||| |||||||||||||||    
T  44099747 aatttaacctaattttttttcgctcatttgctttattaggtttgcaattatttaacctaataaatttcatct-aaaaatgcattgcaccaatttcattc 44099650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 264 - 391
Target Start/End: Original strand, 30083978 - 30084107
Alignment:
Q  264 ttatttattaattttgttacctctgcagcaatttaacctaattt-tttcccgctcatttgctttattatgtttgcaattatttaacctaacaaattccat 362  Q
    |||||||||||||||||||  || |||||||||||| ||||||| ||| ||||| ||||||||||||| ||||| ||||||||||||  | |||||||||    
T  30083978 ttatttattaattttgttaggtccgcagcaatttaatctaatttcttttccgcttatttgctttattaggtttgaaattatttaaccatataaattccat 30084077  T
Q  363 ct-aaaaaatgcatcgcaccaatttcattc 391  Q
    || |||||||||||||||||| ||||||||    
T  30084078 ctaaaaaaatgcatcgcaccattttcattc 30084107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 263 - 370
Target Start/End: Original strand, 18912214 - 18912322
Alignment:
Q  263 tttatttattaattttgttacctctgcagcaatttaacctaattttttcccgctcatttgctttattatgtttg-caattatttaacctaacaaattcca 361  Q
    ||||||||||||||||||||  ||||||||||||||| |||||||||| |||||||||| |||||||| |||||  ||||||||||| ||||||||| ||    
T  18912214 tttatttattaattttgttatgtctgcagcaatttaatctaatttttttccgctcatttactttattaggtttgtaaattatttaacttaacaaatttca 18912313  T
Q  362 tctaaaaaa 370  Q
    |||||||||    
T  18912314 tctaaaaaa 18912322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 264 - 355
Target Start/End: Original strand, 33375630 - 33375721
Alignment:
Q  264 ttatttattaattttgttacctctgcagcaatttaacctaattttttcccgctcatttgctttattatgtttgcaattatttaacctaacaa 355  Q
    |||||||||||||||||||| |||  ||||||||||||||||||||  |||||||||| |||||||| ||||||||||||||||||||||||    
T  33375630 ttatttattaattttgttacgtctcaagcaatttaacctaatttttctccgctcatttactttattaggtttgcaattatttaacctaacaa 33375721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 272 - 390
Target Start/End: Original strand, 24595066 - 24595187
Alignment:
Q  272 taattttgttacctctgcagcaatttaacctaattttttcccgctcatttgctttattatgtttgcaat--tatttaacctaacaaattccatctaa-aa 368  Q
    |||||||||||| ||   |||||||||||||||||||||| |||| | || |||||||| |||||||||  |||||||||||||||||| ||||||| ||    
T  24595066 taattttgttacgtcgatagcaatttaacctaattttttctcgcttacttactttattaggtttgcaattatatttaacctaacaaatttcatctaacaa 24595165  T
Q  369 aatgcatcgcaccaatttcatt 390  Q
    ||||||||||||||||||||||    
T  24595166 aatgcatcgcaccaatttcatt 24595187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 264 - 370
Target Start/End: Complemental strand, 42497217 - 42497111
Alignment:
Q  264 ttatttattaattttgttacctctgcagcaatttaacctaattttttcccgctcatttgctttattatgtttgcaattatttaacctaacaaattccatc 363  Q
    |||||||||||||||||||  ||| || |||||||||||||||||||| | | |||||||||||||| |||| |||||||||||| ||| ||||||||||    
T  42497217 ttatttattaattttgttagatctacaacaatttaacctaattttttcgctcacatttgctttattaggtttacaattatttaacataataaattccatc 42497118  T
Q  364 taaaaaa 370  Q
    |||||||    
T  42497117 taaaaaa 42497111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 296 - 393
Target Start/End: Original strand, 52584966 - 52585064
Alignment:
Q  296 ttaacctaattttttcccgctcatttgctttattatgtttgcaattatttaacctaacaaattccatct-aaaaaatgcatcgcaccaatttcattcat 393  Q
    |||||||||||||||||| || ||||||||||||| ||||| ||||||||||||||||||||| ||||| |||||||| || |||||||||||||||||    
T  52584966 ttaacctaattttttcccacttatttgctttattaagtttgtaattatttaacctaacaaatttcatctaaaaaaatgaattgcaccaatttcattcat 52585064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 264 - 341
Target Start/End: Complemental strand, 28950093 - 28950016
Alignment:
Q  264 ttatttattaattttgttacctctgcagcaatttaacctaattttttcccgctcatttgctttattatgtttgcaatt 341  Q
    |||||||||||||||||||| |||||| ||||||||||||||||||| ||||||||||||||||||| ||||||||||    
T  28950093 ttatttattaattttgttacgtctgcaacaatttaacctaatttttttccgctcatttgctttattaggtttgcaatt 28950016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 315 - 391
Target Start/End: Complemental strand, 45417655 - 45417578
Alignment:
Q  315 ctcatttgctttattatgtttgcaattatttaacctaacaaattccatct-aaaaaatgcatcgcaccaatttcattc 391  Q
    |||||||||||||||| |||||||||||||||||||||||||||  |||| |||||||||||||||||||||||||||    
T  45417655 ctcatttgctttattaggtttgcaattatttaacctaacaaattaaatctaaaaaaatgcatcgcaccaatttcattc 45417578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 318 - 393
Target Start/End: Original strand, 12115359 - 12115435
Alignment:
Q  318 atttgctttattatgtttgcaattatttaacctaacaaattccatct-aaaaaatgcatcgcaccaatttcattcat 393  Q
    ||||||||||||| ||||| ||||||||||||||||||||| ||||| |||||||||||||||||||||||||||||    
T  12115359 atttgctttattaggtttggaattatttaacctaacaaatttcatctaaaaaaatgcatcgcaccaatttcattcat 12115435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 291 - 357
Target Start/End: Original strand, 24595255 - 24595321
Alignment:
Q  291 gcaatttaacctaattttttcccgctcatttgctttattatgtttgcaattatttaacctaacaaat 357  Q
    |||||||||| | ||||||||| ||||||||||||||||| ||||||||||||||||||||| ||||    
T  24595255 gcaatttaacttcattttttcctgctcatttgctttattaggtttgcaattatttaacctaaaaaat 24595321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 264 - 391
Target Start/End: Original strand, 43761946 - 43762075
Alignment:
Q  264 ttatttattaatttt-gttacctctgcagcaatttaacctaattttttcccgctcatttgctttattatgtttgcaattatttaacctaacaaattccat 362  Q
    ||||||||||||||| ||||  | | || |||||||||||||| |||||| | ||||||  | ||||| ||| ||| | |||||| |||||||||| |||    
T  43761946 ttatttattaatttttgttaggtttacaacaatttaacctaatattttccggttcattttgtgtattaggttagcagtaatttaatctaacaaatttcat 43762045  T
Q  363 ctaaaaaa-tgcatcgcaccaatttcattc 391  Q
    |||||||| |||||||||||||||||||||    
T  43762046 ctaaaaaagtgcatcgcaccaatttcattc 43762075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 264 - 335
Target Start/End: Complemental strand, 6537536 - 6537465
Alignment:
Q  264 ttatttattaattttgttacctctgcagcaatttaacctaattttttcccgctcatttgctttattatgttt 335  Q
    |||||||||||||||||||  |||| | ||||||||| |||||||||||| |||||||||||||||| ||||    
T  6537536 ttatttattaattttgttaggtctgtaacaatttaacttaattttttcccactcatttgctttattaggttt 6537465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 264 - 319
Target Start/End: Complemental strand, 42492335 - 42492280
Alignment:
Q  264 ttatttattaattttgttacctctgcagcaatttaacctaattttttcccgctcat 319  Q
    |||||||||||||||||||| ||| ||||||||||||||| |||||||||||||||    
T  42492335 ttatttattaattttgttacgtctacagcaatttaacctatttttttcccgctcat 42492280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 268 - 310
Target Start/End: Complemental strand, 45417741 - 45417699
Alignment:
Q  268 ttattaattttgttacctctgcagcaatttaacctaatttttt 310  Q
    |||||||||||||||  ||||||||||||||||||||||||||    
T  45417741 ttattaattttgttaggtctgcagcaatttaacctaatttttt 45417699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 342 - 391
Target Start/End: Original strand, 47790726 - 47790778
Alignment:
Q  342 atttaacctaacaaattccatctaaaa---aatgcatcgcaccaatttcattc 391  Q
    ||||||||||||||||||| |||||||   |||||||||||||||||||||||    
T  47790726 atttaacctaacaaattccgtctaaaaaaaaatgcatcgcaccaatttcattc 47790778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 259 - 304
Target Start/End: Original strand, 47790691 - 47790736
Alignment:
Q  259 catctttatttattaattttgttacctctgcagcaatttaacctaa 304  Q
    |||| |||||||||||||||||||  ||||||||||||||||||||    
T  47790691 catccttatttattaattttgttaggtctgcagcaatttaacctaa 47790736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 264 - 313
Target Start/End: Complemental strand, 48552932 - 48552883
Alignment:
Q  264 ttatttattaattttgttacctctgcagcaatttaacctaattttttccc 313  Q
    |||||||||||||||||||  ||| |||||| ||||||||||||||||||    
T  48552932 ttatttattaattttgttaagtctacagcaacttaacctaattttttccc 48552883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 264 - 313
Target Start/End: Complemental strand, 48553041 - 48552992
Alignment:
Q  264 ttatttattaattttgttacctctgcagcaatttaacctaattttttccc 313  Q
    |||||||||||||||||||  | |||||||| ||||||||||||||||||    
T  48553041 ttatttattaattttgttaagtttgcagcaacttaacctaattttttccc 48552992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 221 - 261
Target Start/End: Complemental strand, 14427392 - 14427352
Alignment:
Q  221 tgtacaatggggtgtatgagtaaagggtgttcatgtaacat 261  Q
    |||||||| |||||||||| |||||||||||||||||||||    
T  14427392 tgtacaatagggtgtatgattaaagggtgttcatgtaacat 14427352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 221 - 261
Target Start/End: Complemental strand, 35003339 - 35003299
Alignment:
Q  221 tgtacaatggggtgtatgagtaaagggtgttcatgtaacat 261  Q
    |||||||| |||||||||| |||||||||||||||||||||    
T  35003339 tgtacaatagggtgtatgattaaagggtgttcatgtaacat 35003299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 221 - 261
Target Start/End: Complemental strand, 44112722 - 44112682
Alignment:
Q  221 tgtacaatggggtgtatgagtaaagggtgttcatgtaacat 261  Q
    |||||||| |||||||||| |||||||||||||||||||||    
T  44112722 tgtacaatagggtgtatgattaaagggtgttcatgtaacat 44112682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 221 - 261
Target Start/End: Complemental strand, 48119673 - 48119633
Alignment:
Q  221 tgtacaatggggtgtatgagtaaagggtgttcatgtaacat 261  Q
    |||||||| |||||||||| |||||||||||||||||||||    
T  48119673 tgtacaatagggtgtatgattaaagggtgttcatgtaacat 48119633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 293 - 352
Target Start/End: Complemental strand, 48412031 - 48411972
Alignment:
Q  293 aatttaacctaattttttcccgctcatttgctttattatgtttgcaattatttaacctaa 352  Q
    |||||||||||| ||||||||  |||||||||||||||  |||| |||||||||| ||||    
T  48412031 aatttaacctaaatttttccctttcatttgctttattaaatttgtaattatttaatctaa 48411972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 342 - 386
Target Start/End: Original strand, 11928235 - 11928277
Alignment:
Q  342 atttaacctaacaaattccatctaaaaaatgcatcgcaccaattt 386  Q
    |||||||||||||||||||||||  |||||||| |||||||||||    
T  11928235 atttaacctaacaaattccatct--aaaatgcagcgcaccaattt 11928277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 264 - 316
Target Start/End: Original strand, 52584880 - 52584930
Alignment:
Q  264 ttatttattaattttgttacctctgcagcaatttaacctaattttttcccgct 316  Q
    |||||||||||||||||||| |  ||||||| ||||||||||||||| |||||    
T  52584880 ttatttattaattttgttacgt--gcagcaacttaacctaatttttttccgct 52584930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 221 - 261
Target Start/End: Complemental strand, 5489821 - 5489781
Alignment:
Q  221 tgtacaatggggtgtatgagtaaagggtgttcatgtaacat 261  Q
    ||||||||||| |||| || |||||||||||||||||||||    
T  5489821 tgtacaatgggatgtaggaataaagggtgttcatgtaacat 5489781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 363 - 391
Target Start/End: Original strand, 24595313 - 24595341
Alignment:
Q  363 ctaaaaaatgcatcgcaccaatttcattc 391  Q
    |||||||||||||||||||||||||||||    
T  24595313 ctaaaaaatgcatcgcaccaatttcattc 24595341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 221 - 261
Target Start/End: Original strand, 38113250 - 38113290
Alignment:
Q  221 tgtacaatggggtgtatgagtaaagggtgttcatgtaacat 261  Q
    |||||||| |||||||||| |||||||||||||| ||||||    
T  38113250 tgtacaatagggtgtatgattaaagggtgttcatataacat 38113290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 221 - 261
Target Start/End: Complemental strand, 38335963 - 38335923
Alignment:
Q  221 tgtacaatggggtgtatgagtaaagggtgttcatgtaacat 261  Q
    ||||||||  ||||||||| |||||||||||||||||||||    
T  38335963 tgtacaataaggtgtatgattaaagggtgttcatgtaacat 38335923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 221 - 261
Target Start/End: Complemental strand, 41065198 - 41065158
Alignment:
Q  221 tgtacaatggggtgtatgagtaaagggtgttcatgtaacat 261  Q
    |||||||  |||||||||| |||||||||||||||||||||    
T  41065198 tgtacaacagggtgtatgattaaagggtgttcatgtaacat 41065158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 221 - 261
Target Start/End: Original strand, 43571141 - 43571181
Alignment:
Q  221 tgtacaatggggtgtatgagtaaagggtgttcatgtaacat 261  Q
    ||||||||| |||||| || |||||||||||||||||||||    
T  43571141 tgtacaatgaggtgtaggaataaagggtgttcatgtaacat 43571181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #64
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 264 - 304
Target Start/End: Original strand, 52740915 - 52740955
Alignment:
Q  264 ttatttattaattttgttacctctgcagcaatttaacctaa 304  Q
    |||||||||||||||||||  |||||| |||||||||||||    
T  52740915 ttatttattaattttgttaggtctgcaacaatttaacctaa 52740955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 105; Significance: 2e-52; HSPs: 55)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 264 - 391
Target Start/End: Original strand, 46451470 - 46451598
Alignment:
Q  264 ttatttattaattttgttacctctgcagcaatttaacctaattttttcccgctcatttgctttattatgtttgcaattatttaacctaacaaattccatc 363  Q
    |||||||||||||||||||| ||||||| |||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||||    
T  46451470 ttatttattaattttgttacgtctgcagtaatttaacctaattttttcccgttcatttgctttattaggtttgcaattatttaacctaacaaattccatc 46451569  T
Q  364 taaaa-aatgcatcgcaccaatttcattc 391  Q
    ||||| |||||||||||||||||||||||    
T  46451570 taaaataatgcatcgcaccaatttcattc 46451598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 264 - 391
Target Start/End: Complemental strand, 47503159 - 47503031
Alignment:
Q  264 ttatttattaattttgttacctctgcagcaatttaacctaattttttcccgctcatttgctttattatgtttgcaattatttaacctaacaaattccatc 363  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| |||||| ||||||||||||||||||||||||||| ||||    
T  47503159 ttatttattaattttgttacgtctgcagcaatttaacctaattttttcccgctcatttgcattattaggtttgcaattatttaacctaacaaatttcatc 47503060  T
Q  364 taa-aaaatgcatcgcaccaatttcattc 391  Q
    ||| |||||||||||||||||||||||||    
T  47503059 taaaaaaatgcatcgcaccaatttcattc 47503031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 103; E-Value: 4e-51
Query Start/End: Original strand, 260 - 390
Target Start/End: Complemental strand, 53047697 - 53047567
Alignment:
Q  260 atctttatttattaattttgttacctctgcagcaatttaacctaattttttcccgctcatttgctttattatgtttgcaattatttaacctaacaaattc 359  Q
    |||||||||||||||||||||||  |||||||||||||||| ||||||||||||||||||||||||| ||| |||||||||||||||||||||||||||     
T  53047697 atctttatttattaattttgttaggtctgcagcaatttaacataattttttcccgctcatttgctttgttaggtttgcaattatttaacctaacaaattt 53047598  T
Q  360 catctaaaaaatgcatcgcaccaatttcatt 390  Q
    ||| |||||||||||||||||||||||||||    
T  53047597 catttaaaaaatgcatcgcaccaatttcatt 53047567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 99; E-Value: 9e-49
Query Start/End: Original strand, 264 - 393
Target Start/End: Original strand, 18094956 - 18095086
Alignment:
Q  264 ttatttattaattttgttacctctgcagcaatttaacctaattttttcccgctcatttgctttattatgtttgcaattatttaacctaacaaattccatc 363  Q
    |||||||||||||||||||  |||||| ||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||||||    
T  18094956 ttatttattaattttgttaggtctgcatcaatttaacctaattttttcccgctcatttgctttattaggtttgcaatgatttaacctaacaaattccatc 18095055  T
Q  364 -taaaaaatgcatcgcaccaatttcattcat 393  Q
     ||||||||| ||||||||||||||||||||    
T  18095056 ttaaaaaatgaatcgcaccaatttcattcat 18095086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 264 - 391
Target Start/End: Complemental strand, 837309 - 837181
Alignment:
Q  264 ttatttattaattttgttacctctgcagcaatttaacctaattttttcccgctcatttgctttattatgtttgcaattatttaacctaacaaattccatc 363  Q
    ||||||||||||||| |||  |||||| ||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  837309 ttatttattaattttattatgtctgcaacaatttaacctaatttttttccgctcatttgctttattaggtttgcaattatttaacctaacaaattccatc 837210  T
Q  364 taa-aaaatgcatcgcaccaatttcattc 391  Q
    ||| |||||||||||||||||||||||||    
T  837209 taaaaaaatgcatcgcaccaatttcattc 837181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 264 - 391
Target Start/End: Complemental strand, 36643233 - 36643105
Alignment:
Q  264 ttatttattaattttgttacctctgcagcaatttaacctaattttttcccgctcatttgctttattatgtttgcaattatttaacctaacaaattccatc 363  Q
    |||||||||||||||||||| | |||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  36643233 ttatttattaattttgttacgtatgcagcaatttaacctaatttttttccgctcatttgctttattaggtttgcaattatttaacctaacaaattccatc 36643134  T
Q  364 taa-aaaatgcatcgcaccaatttcattc 391  Q
    ||| |||||| ||||||||||||| ||||    
T  36643133 taaaaaaatgtatcgcaccaatttgattc 36643105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 266 - 387
Target Start/End: Original strand, 43017273 - 43017396
Alignment:
Q  266 atttattaattttgttacctctgcagcaatttaacctaattttttcccgctcatttgctttattatgtttgcaattatttaacctaacaaattccatct- 364  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| |||||     
T  43017273 atttattaattttgttacgtctgcagcaatttaacctaattttttcccgctcatttgctttattaagtttgcaattatttaacctaacaaatttcatcta 43017372  T
Q  365 -aaaaaatgcatcgcaccaatttc 387  Q
     ||||||||||| |||||||||||    
T  43017373 aaaaaaatgcattgcaccaatttc 43017396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 94; E-Value: 9e-46
Query Start/End: Original strand, 264 - 390
Target Start/End: Complemental strand, 38887471 - 38887343
Alignment:
Q  264 ttatttattaattttgttacctctgcagcaatttaacctaattttttcccgctcatttgctttattatgtttgcaattatttaacctaacaaattccatc 363  Q
    |||||||||||||||||||  |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| |||     
T  38887471 ttatttattaattttgttaggtctgcagcaatttaacctaattttttcccgctcatttgctttattaggtttgcaattatttaacctaacaaatttcata 38887372  T
Q  364 taaaaaa--tgcatcgcaccaatttcatt 390  Q
    |||||||  || |||||||||||||||||    
T  38887371 taaaaaaagtggatcgcaccaatttcatt 38887343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 93; E-Value: 4e-45
Query Start/End: Original strand, 261 - 391
Target Start/End: Original strand, 35560098 - 35560230
Alignment:
Q  261 tctttatttattaattttgttacctctgcagcaatttaacctaa-ttttttcccgctcatttgctttattatgtttgcaattatttaacctaacaaattc 359  Q
    ||||||||||||||||||||||| |||||||||||||||||||| |||||| || |||||||||||||||| |||||||||||||||||||||||||||     
T  35560098 tctttatttattaattttgttacttctgcagcaatttaacctaattttttttcctctcatttgctttattaggtttgcaattatttaacctaacaaattt 35560197  T
Q  360 cat-ctaaaaaatgcatcgcaccaatttcattc 391  Q
    ||| | |||||||||||||||||||||||||||    
T  35560198 catccaaaaaaatgcatcgcaccaatttcattc 35560230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 259 - 393
Target Start/End: Original strand, 11454200 - 11454335
Alignment:
Q  259 catctttatttattaattttgttacctctgcagcaatttaacctaattttttcccgctcatttgctttattatgtttgcaattatttaacctaacaaatt 358  Q
    |||| |||||||||||||||||||  |||||| |||||||||||||||||||||||||||| | |||||||  |||||||||||||||||||||||||||    
T  11454200 catccttatttattaattttgttatgtctgcaacaatttaacctaattttttcccgctcatctactttatttggtttgcaattatttaacctaacaaatt 11454299  T
Q  359 ccatct-aaaaaatgcatcgcaccaatttcattcat 393  Q
     ||||| |||||||||||||||||||||||||||||    
T  11454300 tcatctaaaaaaatgcatcgcaccaatttcattcat 11454335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 91; E-Value: 6e-44
Query Start/End: Original strand, 264 - 393
Target Start/End: Original strand, 18094741 - 18094871
Alignment:
Q  264 ttatttattaattttgttacctctgcagcaatttaacctaattttttcccgctcatttgctttattatgtttgcaattatttaacctaacaaattccatc 363  Q
    |||||||||||||||||||  |||||||||||||||| ||||||||||||||| ||||||||||||| |||||||||||||||||||||||||| ||||     
T  18094741 ttatttattaattttgttaggtctgcagcaatttaacttaattttttcccgctaatttgctttattaggtttgcaattatttaacctaacaaatcccata 18094840  T
Q  364 t-aaaaaatgcatcgcaccaatttcattcat 393  Q
    | |||||| ||||||||||||||||||||||    
T  18094841 taaaaaaaagcatcgcaccaatttcattcat 18094871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 264 - 379
Target Start/End: Original strand, 11454562 - 11454679
Alignment:
Q  264 ttatttattaatttt-gttacctctgcagcaatttaacctaattttttcccgctcatttgctttattatgtttgcaattatttaacctaacaaattccat 362  Q
    ||||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||||||||||||||    
T  11454562 ttatttattaatttttgttacgtctgcagcaatttaacctaattttttcccgctcatttgctttattaggtttgcaatcatttaacctaacaaattccat 11454661  T
Q  363 c-taaaaaatgcatcgca 379  Q
    | ||||||||||||||||    
T  11454662 cttaaaaaatgcatcgca 11454679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 89; E-Value: 9e-43
Query Start/End: Original strand, 268 - 391
Target Start/End: Original strand, 37760501 - 37760625
Alignment:
Q  268 ttattaattttgttacctctgcagcaatttaacctaattttttcccgctcatttgctttattatgtttgcaattatttaacctaacaaattccat-ctaa 366  Q
    |||||||||||||||| |||||| ||||||||||||| ||||||||||||||||||||||||| ||||||||||||||||||||||||||| ||| | ||    
T  37760501 ttattaattttgttacgtctgcaacaatttaacctaaatttttcccgctcatttgctttattaggtttgcaattatttaacctaacaaatttcatccaaa 37760600  T
Q  367 aaaatgcatcgcaccaatttcattc 391  Q
    |||||| ||||||||||||||||||    
T  37760601 aaaatgtatcgcaccaatttcattc 37760625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 89; E-Value: 9e-43
Query Start/End: Original strand, 264 - 391
Target Start/End: Original strand, 40050850 - 40050977
Alignment:
Q  264 ttatttattaattttgttacctctgcagcaatttaacctaattttttcccgctcatttgctttattatgtttgcaattatttaacctaacaaattccatc 363  Q
    ||||||||| |||||||||  |||||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||| ||||    
T  40050850 ttatttatttattttgttagttctgcagcaatttaacctaattttttcccgctcatttgctttattaggtttgcaataatttaacctaacaaatt-catc 40050948  T
Q  364 ta-aaaaatgcatcgcaccaatttcattc 391  Q
    || ||||||||||||||||||||| ||||    
T  40050949 tacaaaaatgcatcgcaccaatttaattc 40050977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 264 - 391
Target Start/End: Complemental strand, 20877322 - 20877194
Alignment:
Q  264 ttatttattaattttgttacctctgcagcaatttaacctaattttttcccgctcatttgctttattatgtttgcaattatttaacctaacaaattccatc 363  Q
    |||||||||||||||||||| ||||||||||||||| ||||||||||||| ||||||| |||||||| |||||   ||||||||||||||||||| ||||    
T  20877322 ttatttattaattttgttacgtctgcagcaatttaatctaattttttccctctcatttactttattaggtttgtcgttatttaacctaacaaatttcatc 20877223  T
Q  364 taa-aaaatgcatcgcaccaatttcattc 391  Q
    ||| |||||||||||||||||||||||||    
T  20877222 taaaaaaatgcatcgcaccaatttcattc 20877194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 84; E-Value: 8e-40
Query Start/End: Original strand, 264 - 391
Target Start/End: Complemental strand, 38887686 - 38887556
Alignment:
Q  264 ttatttattaattttgttacctctgcagcaatttaacctaattttttc--ccgctcatttgctttattatgtttgcaattatttaacctaacaaattcca 361  Q
    ||||||||||||||| |||  ||||||||||||||||||||||||||   ||||||||||||||||||| |||||||||||||||||||||||||||||     
T  38887686 ttatttattaattttattaggtctgcagcaatttaacctaatttttttttccgctcatttgctttattaggtttgcaattatttaacctaacaaattcct 38887587  T
Q  362 tct-aaaaaatgcatcgcaccaatttcattc 391  Q
    ||| |||||||||||||||| ||||||||||    
T  38887586 tctaaaaaaatgcatcgcacaaatttcattc 38887556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 264 - 391
Target Start/End: Complemental strand, 47503333 - 47503204
Alignment:
Q  264 ttatttattaattttgttacctctgcagcaatttaacctaatttttt-cccgctcatttgctttattatgtttgcaattatttaacctaacaaattccat 362  Q
    ||||||||||||||| |||| ||| |  |||||||||||| |||||| |||||||||||||||||||| ||||||||||||||||||||||||||| |||    
T  47503333 ttatttattaattttattacgtctacgacaatttaacctattttttttcccgctcatttgctttattaggtttgcaattatttaacctaacaaatttcat 47503234  T
Q  363 ctaa-aaaatgcatcgcaccaatttcattc 391  Q
    |||| |||||||||||||||||||||||||    
T  47503233 ctaaaaaaatgcatcgcaccaatttcattc 47503204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 264 - 370
Target Start/End: Complemental strand, 45514524 - 45514419
Alignment:
Q  264 ttatttattaattttgttacctctgcagcaatttaacctaattttttcccgctcatttgctttattatgtttgcaattatttaacctaacaaattccatc 363  Q
    |||||||||||||||||||| ||||||||||||||| |||||||||||||| |||||| |||||||| ||||||||||||||||||||| ||||| ||||    
T  45514524 ttatttattaattttgttacgtctgcagcaatttaatctaattttttcccgttcatttactttatta-gtttgcaattatttaacctaataaatttcatc 45514426  T
Q  364 taaaaaa 370  Q
    |||||||    
T  45514425 taaaaaa 45514419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 264 - 391
Target Start/End: Original strand, 11454381 - 11454512
Alignment:
Q  264 ttatttattaattttgtt---acctctgcagcaatttaacctaattttttcccgctcatttgctttattatgtttgcaattatttaacctaacaaattcc 360  Q
    ||||||||||||||||||   || |||||||||||||| ||||||||||||  ||||||||||||||||| | ||||||||||||||||||||||| | |    
T  11454381 ttatttattaattttgttgttacgtctgcagcaatttatcctaattttttct-gctcatttgctttattaggcttgcaattatttaacctaacaaacttc 11454479  T
Q  361 atct--aaaaaatgcatcgcaccaatttcattc 391  Q
    ||||  |||||||||||||||||||||||||||    
T  11454480 atctaaaaaaaatgcatcgcaccaatttcattc 11454512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 293 - 391
Target Start/End: Original strand, 47519955 - 47520054
Alignment:
Q  293 aatttaacctaattttttcccgctcatttgctttattatgtttgcaattatttaacctaacaaattccatctaaa-aaatgcatcgcaccaatttcattc 391  Q
    |||||||||||||||||||||||||||||||||||||| | |||||||||||||||||||| || |||||||||| |||||||||||| ||||| |||||    
T  47519955 aatttaacctaattttttcccgctcatttgctttattagggttgcaattatttaacctaaccaagtccatctaaagaaatgcatcgcatcaattccattc 47520054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 264 - 370
Target Start/End: Complemental strand, 16015356 - 16015250
Alignment:
Q  264 ttatttattaattttgttacctctgcagcaatttaacctaattttttcccgctcatttgctttattatgtttgcaattatttaacctaacaaattccatc 363  Q
    |||||||||| ||||||||  ||| | | |||||||||||||||||||||||||||||||||||||| |||  ||||||||||||||||||||||| |||    
T  16015356 ttatttattagttttgttaggtctacggaaatttaacctaattttttcccgctcatttgctttattaggttaacaattatttaacctaacaaattctatc 16015257  T
Q  364 taaaaaa 370  Q
    |||||||    
T  16015256 taaaaaa 16015250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 266 - 390
Target Start/End: Original strand, 43819330 - 43819455
Alignment:
Q  266 atttattaattttgttacctctgcagcaatttaacctaattttttcccgctcatttgctttattatgtttgcaattatttaacctaacaaattccatcta 365  Q
    |||||||||||||||||  ||||||||||||||||||||| |||||||||||||||||| ||||| |||  || | ||||||||||| || || ||||||    
T  43819330 atttattaattttgttaggtctgcagcaatttaacctaatattttcccgctcatttgctgtattaagttaacactaatttaacctaataattttcatcta 43819429  T
Q  366 aaa-aatgcatcgcaccaatttcatt 390  Q
    ||| ||||||| ||||||||||||||    
T  43819430 aaacaatgcattgcaccaatttcatt 43819455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 301 - 391
Target Start/End: Original strand, 46451320 - 46451412
Alignment:
Q  301 ctaattttttcccgctcatttgctttattatgtttgcaattatttaacctaacaaattccatct--aaaaaatgcatcgcaccaatttcattc 391  Q
    ||||||||| ||||||||||||||||||||  |||||||||||||||||||||||||| |||||  |||||||||||||||||||||||||||    
T  46451320 ctaatttttccccgctcatttgctttattagatttgcaattatttaacctaacaaatttcatctaaaaaaaatgcatcgcaccaatttcattc 46451412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 268 - 353
Target Start/End: Complemental strand, 47519956 - 47519871
Alignment:
Q  268 ttattaattttgttacctctgcagcaatttaacctaattttttcccgctcatttgctttattatgtttgcaattatttaacctaac 353  Q
    |||||||||||||||  | |||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||    
T  47519956 ttattaattttgttagttttgcagcaatttaacctaattttttcccgctcatttgctttattaagtttgtaattatttaacctaac 47519871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 264 - 359
Target Start/End: Complemental strand, 38887901 - 38887806
Alignment:
Q  264 ttatttattaattttgttacctctgcagcaatttaacctaattttttcccgctcatttgctttattatgtttgcaattatttaacctaacaaattc 359  Q
    ||||||||||||||| | |  ||||||| |||||||||||||||||| ||||||||||||||||||| ||||||||||||||||| ||||||||||    
T  38887901 ttatttattaattttatcaggtctgcagtaatttaacctaatttttttccgctcatttgctttattaggtttgcaattatttaacgtaacaaattc 38887806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 265 - 391
Target Start/End: Complemental strand, 21969111 - 21968986
Alignment:
Q  265 tatttattaattttgttacctctgcagcaatttaacctaattttttcccgctcatttgctttattatgtttgcaattatttaacctaacaaattccatct 364  Q
    |||||||||||||| |||  || |||||||||||| |||||||||| |  |  ||||||| ||||| ||| ||| | |||||||||||||||||||||||    
T  21969111 tatttattaattttattaggtcagcagcaatttaatctaatttttttctcca-atttgctgtattaggttagcagtaatttaacctaacaaattccatct 21969013  T
Q  365 aaaaaatgcatcgcaccaatttcattc 391  Q
    |||||||||||||||||||||||||||    
T  21969012 aaaaaatgcatcgcaccaatttcattc 21968986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 265 - 391
Target Start/End: Complemental strand, 21991547 - 21991422
Alignment:
Q  265 tatttattaattttgttacctctgcagcaatttaacctaattttttcccgctcatttgctttattatgtttgcaattatttaacctaacaaattccatct 364  Q
    |||||||||||||| |||  || |||||||||||| |||||||||| |  |  ||||||| ||||| ||| ||| | |||||||||||||||||||||||    
T  21991547 tatttattaattttattaggtcagcagcaatttaatctaatttttttctcca-atttgctgtattaggttagcagtaatttaacctaacaaattccatct 21991449  T
Q  365 aaaaaatgcatcgcaccaatttcattc 391  Q
    |||||||||||||||||||||||||||    
T  21991448 aaaaaatgcatcgcaccaatttcattc 21991422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 264 - 379
Target Start/End: Original strand, 11453937 - 11454054
Alignment:
Q  264 ttatttattaattttgttacctctgcagcaatttaacctaattttttcc-cgctcatttgctttattatgtttgcaattatttaacctaacaaattccat 362  Q
    |||||||||||||||||||| | || |  ||||||| |||||||||| | || ||||||||||||||| ||||||||||||||||||||||||||| |||    
T  11453937 ttatttattaattttgttacgtttgaaataatttaatctaatttttttctcgttcatttgctttattaggtttgcaattatttaacctaacaaattacat 11454036  T
Q  363 ct-aaaaaatgcatcgca 379  Q
    || |||||||||||||||    
T  11454037 ctaaaaaaatgcatcgca 11454054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 293 - 370
Target Start/End: Original strand, 24365763 - 24365840
Alignment:
Q  293 aatttaacctaattttttcccgctcatttgctttattatgtttgcaattatttaacctaacaaattccatctaaaaaa 370  Q
    |||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||||| |||| |||||||||||    
T  24365763 aatttaacctaattttttcccgctcatttgatttattaggtttgcaattatttaacctaacgaatttcatctaaaaaa 24365840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 264 - 391
Target Start/End: Original strand, 11522532 - 11522662
Alignment:
Q  264 ttatttattaattttgttacctctgcagcaatttaacctaattttttcccgctcatttgctttattatgtttgcaattatttaacctaacaaattccatc 363  Q
    |||||||||||||||||||  ||| || ||||||||||||||||||| | | ||||||| ||||||| |||| ||||| |||||||||||||||| ||||    
T  11522532 ttatttattaattttgttaggtctacaacaatttaacctaatttttttcagttcatttgttttattaggtttacaattgtttaacctaacaaatttcatc 11522631  T
Q  364 taaaaa---atgcatcgcaccaatttcattc 391  Q
    ||||||   ||| | ||||||||||||||||    
T  11522632 taaaaatatatgaaccgcaccaatttcattc 11522662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 267 - 393
Target Start/End: Original strand, 11220780 - 11220906
Alignment:
Q  267 tttattaattttgttacctctgcagcaatttaacctaattttttcccgctcatttgctttattatgtttgcaattatttaacctaacaaattccatct-a 365  Q
    ||||||||||||||||  ||||||||||||||||||||| |||| || || ||||||| ||||| ||| ||| | |||| |||||||||||| ||||| |    
T  11220780 tttattaattttgttaggtctgcagcaatttaacctaatatttttcc-cttatttgctgtattaggttagcagtaattttacctaacaaatttcatctaa 11220878  T
Q  366 aaaaatgcatcgcaccaatttcattcat 393  Q
    |||||||||| |||||||||||||||||    
T  11220879 aaaaatgcattgcaccaatttcattcat 11220906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 264 - 370
Target Start/End: Original strand, 46451078 - 46451181
Alignment:
Q  264 ttatttattaattttgttacctctgcagcaatttaacctaattttttcccgctcatttgctttattatgtttgcaattatttaacctaacaaattccatc 363  Q
    |||||||||||||||| ||| |||||| ||||||||  ||||||||| |||||||||| ||   ||| |||||||||||||||||||||||||||| |||    
T  46451078 ttatttattaattttgatacgtctgcaacaatttaaattaatttttttccgctcatttcct---ttaagtttgcaattatttaacctaacaaattctatc 46451174  T
Q  364 taaaaaa 370  Q
    |||||||    
T  46451175 taaaaaa 46451181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 300 - 393
Target Start/End: Original strand, 52300747 - 52300841
Alignment:
Q  300 cctaattttttcccgctcatttgctttattatgtttgcaattatttaacctaacaaattccatct-aaaaaatgcatcgcaccaatttcattcat 393  Q
    |||||||||||||||||||||| || ||||| ||| ||| | ||||||||||||||||||||| | ||||||||||| |||||||||||||||||    
T  52300747 cctaattttttcccgctcatttactgtattaggttagcagtaatttaacctaacaaattccatttaaaaaaatgcattgcaccaatttcattcat 52300841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 264 - 368
Target Start/End: Original strand, 850932 - 851036
Alignment:
Q  264 ttatttattaattttgttacctctgcagcaatttaacctaattttttcccgctcatttgctttattatgtttgcaattatttaacctaacaaattccatc 363  Q
    |||||||||||||||  ||| | || ||||||||||| ||||||||| ||||||||||  ||||||| ||||||||||||||||  ||||||||| ||||    
T  850932 ttatttattaatttttgtacatttgtagcaatttaacttaatttttttccgctcatttattttattaggtttgcaattatttaagttaacaaatttcatc 851031  T
Q  364 taaaa 368  Q
    |||||    
T  851032 taaaa 851036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 294 - 358
Target Start/End: Original strand, 51654074 - 51654138
Alignment:
Q  294 atttaacctaattttttcccgctcatttgctttattatgtttgcaattatttaacctaacaaatt 358  Q
    ||||||||||||||||||||||||||||| ||||||| |||| ||||||||||||||||||||||    
T  51654074 atttaacctaattttttcccgctcatttgttttattaggtttacaattatttaacctaacaaatt 51654138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 264 - 391
Target Start/End: Original strand, 3847825 - 3847945
Alignment:
Q  264 ttatttattaattttgttacctctgcagcaatttaacctaattttttcccgctcatttgctttattatgtttgcaattatttaacctaacaaattccatc 363  Q
    |||||||||||||||||||  ||||||||||||||||||||| ||||| |||||||||||| ||        |   | ||||||||||||||||| ||||    
T  3847825 ttatttattaattttgttaggtctgcagcaatttaacctaatattttcgcgctcatttgctgta--------gtggtgatttaacctaacaaatttcatc 3847916  T
Q  364 t-aaaaaatgcatcgcaccaatttcattc 391  Q
    | |||||||||||||||||||||||||||    
T  3847917 taaaaaaatgcatcgcaccaatttcattc 3847945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 338 - 386
Target Start/End: Original strand, 851039 - 851088
Alignment:
Q  338 aattatttaacctaacaaattccatctaaaa-aatgcatcgcaccaattt 386  Q
    ||||||||||||||||||||| ||||||||| ||||||||||||||||||    
T  851039 aattatttaacctaacaaatttcatctaaaagaatgcatcgcaccaattt 851088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 264 - 386
Target Start/End: Complemental strand, 25917546 - 25917426
Alignment:
Q  264 ttatttattaattttgttacctctgcagcaatttaacctaattttttcccgctcatttgctttattatgtttgcaattatttaacctaacaaattccatc 363  Q
    ||||||||||||||| |||  |||||||||| ||||||||||  |||||| || |  || |  |||| ||| |||   ||||||||||||||||||||||    
T  25917546 ttatttattaattttattaagtctgcagcaacttaacctaataatttccctctaaaatgttacattaggttagcagcaatttaacctaacaaattccatc 25917447  T
Q  364 taaaaaatgcatcgcaccaattt 386  Q
    |  |||||||| |||||||||||    
T  25917446 t--aaaatgcagcgcaccaattt 25917426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 264 - 311
Target Start/End: Original strand, 46451252 - 46451299
Alignment:
Q  264 ttatttattaattttgttacctctgcagcaatttaacctaattttttc 311  Q
    |||||||||||||||||||| ||| || ||||||||||||||||||||    
T  46451252 ttatttattaattttgttacgtctccaacaatttaacctaattttttc 46451299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 319 - 356
Target Start/End: Original strand, 54274787 - 54274824
Alignment:
Q  319 tttgctttattatgtttgcaattatttaacctaacaaa 356  Q
    |||||||||||| |||||||||||||||||||||||||    
T  54274787 tttgctttattaggtttgcaattatttaacctaacaaa 54274824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 221 - 261
Target Start/End: Original strand, 4190320 - 4190360
Alignment:
Q  221 tgtacaatggggtgtatgagtaaagggtgttcatgtaacat 261  Q
    |||||||| |||||||||| |||||||||||||||||||||    
T  4190320 tgtacaatagggtgtatgattaaagggtgttcatgtaacat 4190360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 260 - 368
Target Start/End: Original strand, 17755732 - 17755840
Alignment:
Q  260 atctttatttattaattttgttacctctgcagcaatttaacctaattttttcccgctcatttgctttattatgtttgcaattatttaacctaacaaattc 359  Q
    ||||||||||||||||||| |||  || ||||||||||||||||||  |||||| || |  || |  ||||  || |||   ||||||||||||||||||    
T  17755732 atctttatttattaattttattaggtccgcagcaatttaacctaataatttccctctaaaatgttgcattagattagcagcaatttaacctaacaaattc 17755831  T
Q  360 catctaaaa 368  Q
    |||||||||    
T  17755832 catctaaaa 17755840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 260 - 368
Target Start/End: Original strand, 19057052 - 19057160
Alignment:
Q  260 atctttatttattaattttgttacctctgcagcaatttaacctaattttttcccgctcatttgctttattatgtttgcaattatttaacctaacaaattc 359  Q
    ||||||||||||||||||| |||  || ||||||||||||||||||  |||||| || |  || |  ||||  || |||   ||||||||||||||||||    
T  19057052 atctttatttattaattttattaggtccgcagcaatttaacctaataatttccctctaaaatgttgcattagattagcagcaatttaacctaacaaattc 19057151  T
Q  360 catctaaaa 368  Q
    |||||||||    
T  19057152 catctaaaa 19057160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 221 - 261
Target Start/End: Complemental strand, 25413726 - 25413686
Alignment:
Q  221 tgtacaatggggtgtatgagtaaagggtgttcatgtaacat 261  Q
    |||||||||||||||| || |||||||||||||||||||||    
T  25413726 tgtacaatggggtgtaggaataaagggtgttcatgtaacat 25413686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 221 - 261
Target Start/End: Original strand, 54246203 - 54246243
Alignment:
Q  221 tgtacaatggggtgtatgagtaaagggtgttcatgtaacat 261  Q
    |||||||||||||||| || |||||||||||||||||||||    
T  54246203 tgtacaatggggtgtaggaataaagggtgttcatgtaacat 54246243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 338 - 391
Target Start/End: Original strand, 54274725 - 54274779
Alignment:
Q  338 aattatttaacctaacaaattccatct-aaaaaatgcatcgcaccaatttcattc 391  Q
    ||||||||||||||||||||| ||||| |||||||||||||  ||||||| ||||    
T  54274725 aattatttaacctaacaaatttcatctaaaaaaatgcatcgtcccaattttattc 54274779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 221 - 261
Target Start/End: Complemental strand, 9434169 - 9434129
Alignment:
Q  221 tgtacaatggggtgtatgagtaaagggtgttcatgtaacat 261  Q
    |||||||| | |||||||| |||||||||||||||||||||    
T  9434169 tgtacaatagagtgtatgattaaagggtgttcatgtaacat 9434129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 221 - 261
Target Start/End: Original strand, 10457947 - 10457987
Alignment:
Q  221 tgtacaatggggtgtatgagtaaagggtgttcatgtaacat 261  Q
    |||||||| |||||||||| |||| ||||||||||||||||    
T  10457947 tgtacaatagggtgtatgattaaaaggtgttcatgtaacat 10457987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 221 - 261
Target Start/End: Complemental strand, 36150175 - 36150135
Alignment:
Q  221 tgtacaatggggtgtatgagtaaagggtgttcatgtaacat 261  Q
    |||| |||||||||||||| |||||||| ||||||||||||    
T  36150175 tgtataatggggtgtatgaataaagggtattcatgtaacat 36150135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 221 - 261
Target Start/End: Complemental strand, 40480794 - 40480754
Alignment:
Q  221 tgtacaatggggtgtatgagtaaagggtgttcatgtaacat 261  Q
    ||||||||||||  ||||| |||||||||||||||||||||    
T  40480794 tgtacaatggggcatatgaataaagggtgttcatgtaacat 40480754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 221 - 261
Target Start/End: Complemental strand, 42100733 - 42100693
Alignment:
Q  221 tgtacaatggggtgtatgagtaaagggtgttcatgtaacat 261  Q
    ||||||||| |||||| || |||||||||||||||||||||    
T  42100733 tgtacaatgaggtgtaggaataaagggtgttcatgtaacat 42100693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 221 - 261
Target Start/End: Original strand, 45126983 - 45127023
Alignment:
Q  221 tgtacaatggggtgtatgagtaaagggtgttcatgtaacat 261  Q
    ||||||||||| ||||||| ||||||||||| |||||||||    
T  45126983 tgtacaatgggatgtatgaataaagggtgtttatgtaacat 45127023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 221 - 261
Target Start/End: Original strand, 47191080 - 47191120
Alignment:
Q  221 tgtacaatggggtgtatgagtaaagggtgttcatgtaacat 261  Q
    ||||||||| |||||| || |||||||||||||||||||||    
T  47191080 tgtacaatgaggtgtaggaataaagggtgttcatgtaacat 47191120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 221 - 261
Target Start/End: Original strand, 53581913 - 53581953
Alignment:
Q  221 tgtacaatggggtgtatgagtaaagggtgttcatgtaacat 261  Q
    |||||||||| |||||||| ||||| |||||||||||||||    
T  53581913 tgtacaatggagtgtatgaataaagagtgttcatgtaacat 53581953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 221 - 261
Target Start/End: Complemental strand, 54237141 - 54237101
Alignment:
Q  221 tgtacaatggggtgtatgagtaaagggtgttcatgtaacat 261  Q
    ||||||||||| |||| || |||||||||||||||||||||    
T  54237141 tgtacaatgggatgtaggaataaagggtgttcatgtaacat 54237101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 101; Significance: 6e-50; HSPs: 58)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 101; E-Value: 6e-50
Query Start/End: Original strand, 264 - 391
Target Start/End: Complemental strand, 28612339 - 28612211
Alignment:
Q  264 ttatttattaattttgttacctctgcagcaatttaacctaattttttcccgctcatttgctttattatgtttgcaattatttaacctaacaaattccatc 363  Q
    |||||||||||||||||||  | |||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  28612339 ttatttattaattttgttagttttgcatcaatttaacctaattttttcccgctcatttgctttattaggtttgcaattatttaacctaacaaattccatc 28612240  T
Q  364 taa-aaaatgcatcgcaccaatttcattc 391  Q
    ||| |||||||||||||||||||||||||    
T  28612239 taaaaaaatgcatcgcaccaatttcattc 28612211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 264 - 391
Target Start/End: Complemental strand, 28611914 - 28611786
Alignment:
Q  264 ttatttattaattttgttacctctgcagcaatttaacctaattttttcccgctcatttgctttattatgtttgcaattatttaacctaacaaattccatc 363  Q
    |||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||| |||| |||||||||||||||||||||||| |||||||    
T  28611914 ttatttattaattttgttaggtctgcagcaatttaacctaattttttcccgctcatttgcttgattaggtttgcaattatttaacctaacaagttccatc 28611815  T
Q  364 taa-aaaatgcatcgcaccaatttcattc 391  Q
    ||| |||||||||||||||||| ||||||    
T  28611814 taaaaaaatgcatcgcaccaatatcattc 28611786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 93; E-Value: 4e-45
Query Start/End: Original strand, 260 - 391
Target Start/End: Complemental strand, 41995863 - 41995731
Alignment:
Q  260 atctttatttattaattttgttacctctgcagcaatttaacctaattttttcccgctcatttgctttattatgtttgcaattatttaacctaacaaattc 359  Q
    |||||||||||||||||||||||  |||| | ||||||||||||||||||||| | ||||||||||||||| ||||||||||||||||||||||||||||    
T  41995863 atctttatttattaattttgttatgtctgaaacaatttaacctaattttttcctgttcatttgctttattaggtttgcaattatttaacctaacaaattc 41995764  T
Q  360 catctaaaaa-atgcatcgcaccaatttcattc 391  Q
    |||||||||| ||||||||||| ||||||||||    
T  41995763 catctaaaaacatgcatcgcacgaatttcattc 41995731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 260 - 390
Target Start/End: Original strand, 44256469 - 44256600
Alignment:
Q  260 atctttatttattaattttgttacctctgcagcaatttaacctaattttttcccgctcatttgctttattatgtttgcaattatttaacctaacaaattc 359  Q
    |||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||| |||||||| |||| ||| |||||||||||| |||||     
T  44256469 atctttatttattaattttgttaggtctgcagcaatttaacctaattttttcccgctcattttctttattaggttttcaagtatttaacctaataaattt 44256568  T
Q  360 catct-aaaaaatgcatcgcaccaatttcatt 390  Q
    ||||| ||||||||||||||||||||||||||    
T  44256569 catctaaaaaaatgcatcgcaccaatttcatt 44256600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 89; E-Value: 9e-43
Query Start/End: Original strand, 264 - 391
Target Start/End: Complemental strand, 10129603 - 10129475
Alignment:
Q  264 ttatttattaattttgttacctctgcagcaatttaacctaattttttcccgctcatttgctttattatgtttgcaattatttaacctaacaaattccatc 363  Q
    |||||||||||||||||||  ||||||||||||||||||||||| ||| |||||||||||||||||| ||||||||||||||||||||| |||||| |||    
T  10129603 ttatttattaattttgttaggtctgcagcaatttaacctaatttgttctcgctcatttgctttattaggtttgcaattatttaacctaataaattctatc 10129504  T
Q  364 t-aaaaaatgcatcgcaccaatttcattc 391  Q
    | ||||||| |||||||||||||||||||    
T  10129503 taaaaaaattcatcgcaccaatttcattc 10129475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 264 - 390
Target Start/End: Original strand, 6348072 - 6348199
Alignment:
Q  264 ttatttattaattttgttacctctgcagcaatttaacctaattttttcccgctcatttgctttattatgtttgcaattatttaacctaacaaattccatc 363  Q
    |||||||||||||||||||| |||||||||||||||| |||||||||| |||||| ||||||||||| ||||||||||||||||  ||||||||| ||||    
T  6348072 ttatttattaattttgttacgtctgcagcaatttaacataattttttctcgctcaattgctttattaggtttgcaattatttaatttaacaaatttcatc 6348171  T
Q  364 t-aaaaaatgcatcgcaccaatttcatt 390  Q
    | ||||||||||||||||||||||||||    
T  6348172 taaaaaaatgcatcgcaccaatttcatt 6348199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 86; E-Value: 5e-41
Query Start/End: Original strand, 259 - 391
Target Start/End: Complemental strand, 37131598 - 37131466
Alignment:
Q  259 catctttatttattaattttgttacctctgcagcaatttaacctaattttttcccgctcatttgctttattatgtttgcaattatttaacctaacaaatt 358  Q
    |||| |||||||||||||||||||  |||||||||||||||||||||||||| || |||||||||||||||| ||||||||||||||||| |||||||||    
T  37131598 catccttatttattaattttgttagatctgcagcaatttaacctaatttttttccactcatttgctttatta-gtttgcaattatttaacttaacaaatt 37131500  T
Q  359 ccatct-aaaaaatgcatcgcaccaatttcattc 391  Q
     ||||| |||||||||||| ||||||||||||||    
T  37131499 tcatctaaaaaaatgcatcacaccaatttcattc 37131466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 292 - 391
Target Start/End: Complemental strand, 5001777 - 5001677
Alignment:
Q  292 caatttaacctaattttttcccgctcatttgctttattatgtttgcaattatttaacctaacaaattccatctaa-aaaatgcatcgcaccaatttcatt 390  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||||    
T  5001777 caatttaacctaattttttcccgctcatttgctttattaggtttgcaattatttaacctaacaaatttcatctaaaaaaatgcatcgcaccaatttcatt 5001678  T
Q  391 c 391  Q
    |    
T  5001677 c 5001677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 264 - 393
Target Start/End: Complemental strand, 28612761 - 28612633
Alignment:
Q  264 ttatttattaattttgttacctctgcagcaatttaacctaattttttcccgctcatttgctttattatgtttgcaattatttaacctaacaaattccatc 363  Q
    |||||||||||||||||||   ||||| |||||||||||||| |||||||||||||| ||||||||| ||||||||||||||||||||||||||| ||||    
T  28612761 ttatttattaattttgttagg-ctgcaacaatttaacctaatcttttcccgctcatt-gctttattaggtttgcaattatttaacctaacaaatttcatc 28612664  T
Q  364 taa-aaaatgcatcgcaccaatttcattcat 393  Q
    ||| |||||||||||||||||||||||||||    
T  28612663 taaaaaaatgcatcgcaccaatttcattcat 28612633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 264 - 391
Target Start/End: Original strand, 11735910 - 11736037
Alignment:
Q  264 ttatttattaattttgttacctctgcagcaatttaacctaattttttcccgctcatttgctttattatgtttgcaattatttaacctaacaaattccatc 363  Q
    |||||||||||||||||||  | ||||||||||||||||||| ||||||||||||||||||| || | ||||||||||||||||||||||||||| ||||    
T  11735910 ttatttattaattttgttaggt-tgcagcaatttaacctaatattttcccgctcatttgcttcataaggtttgcaattatttaacctaacaaatttcatc 11736008  T
Q  364 t-aaaaaatgcatcgcaccaatttcattc 391  Q
    | ||||||||||||||||| |||||||||    
T  11736009 taaaaaaatgcatcgcaccgatttcattc 11736037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 264 - 391
Target Start/End: Complemental strand, 28612975 - 28612846
Alignment:
Q  264 ttatttattaattttgttacctctgcagcaatttaacctaattttttcccgctcatttgctttattatg-tttgcaattatttaacctaacaaattccat 362  Q
    |||||||||||||||||||  |||||| |||||||||||||||||||| || ||||||| ||||||| | ||| ||||||||||| ||||||||||||||    
T  28612975 ttatttattaattttgttaggtctgcaacaatttaacctaattttttctcgttcatttgttttattaggtttttcaattatttaatctaacaaattccat 28612876  T
Q  363 ctaaaa-aatgcatcgcaccaatttcattc 391  Q
    |||||| |||||||||||||||||||||||    
T  28612875 ctaaaataatgcatcgcaccaatttcattc 28612846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 264 - 391
Target Start/End: Complemental strand, 28612127 - 28611999
Alignment:
Q  264 ttatttattaattttgttacctctgcagcaatttaacctaattttttcccgctcatttgctttattatgtttgcaattatttaacctaacaaattccatc 363  Q
    |||||||||||||||||||  |||||| ||||||||||||||||||||| |||||||| |||||||| ||||||||||||||||||||| |||    |||    
T  28612127 ttatttattaattttgttaggtctgcaacaatttaacctaattttttccagctcattttctttattaggtttgcaattatttaacctaaaaaaaattatc 28612028  T
Q  364 t-aaaaaatgcatcgcaccaatttcattc 391  Q
    | |||||||||||||||||||||||||||    
T  28612027 taaaaaaatgcatcgcaccaatttcattc 28611999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 264 - 390
Target Start/End: Original strand, 29550133 - 29550265
Alignment:
Q  264 ttatttattaattttgttacctctgcagcaatttaacctaattttttcccgctcatttgctttattat----gtttgcaattatttaacctaacaaattc 359  Q
    ||||||||||||||| |||  |||||| ||||||||||||||||||| |||||||||||||||||||     ||||||||||||||||||||||||||||    
T  29550133 ttatttattaattttattaggtctgcaacaatttaacctaatttttttccgctcatttgctttattagctaggtttgcaattatttaacctaacaaattc 29550232  T
Q  360 catct--aaaaaatgcatcgcaccaatttcatt 390  Q
     ||||  ||||||||||||||||||||||||||    
T  29550233 aatctaaaaaaaatgcatcgcaccaatttcatt 29550265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 288 - 390
Target Start/End: Original strand, 11736325 - 11736428
Alignment:
Q  288 gcagcaatttaacctaattttttcccgctcatttgctttattatgtttgcaattatttaacctaacaaattccatct-aaaaaatgcatcgcaccaattt 386  Q
    |||||||||||||||||| ||||||||||||||||||| || | ||||||||||||||||||||||||||| ||||| ||||||||||||||||||||||    
T  11736325 gcagcaatttaacctaatattttcccgctcatttgcttcataaggtttgcaattatttaacctaacaaatttcatctaaaaaaatgcatcgcaccaattt 11736424  T
Q  387 catt 390  Q
    ||||    
T  11736425 catt 11736428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 264 - 391
Target Start/End: Complemental strand, 3249905 - 3249777
Alignment:
Q  264 ttatttattaattttgttacctctgcagcaatttaacctaattttttcccgctcatttgctttattatgtttgcaattatttaacctaacaaattccatc 363  Q
    |||||||||||||||||||  |||||| |||||||||||||| |||| ||||| ||||||| ||||| ||| ||| | ||||||||||||||||| ||||    
T  3249905 ttatttattaattttgttagatctgcaacaatttaacctaatatttttccgcttatttgctgtattaggttagcagtaatttaacctaacaaatttcatc 3249806  T
Q  364 taa-aaaatgcatcgcaccaatttcattc 391  Q
    ||| |||||||||||||||||||||||||    
T  3249805 taaaaaaatgcatcgcaccaatttcattc 3249777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 264 - 391
Target Start/End: Complemental strand, 5001627 - 5001499
Alignment:
Q  264 ttatttattaattttgttacctctgcagcaatttaacctaattttttcccgctcatttgctttattatgtttgcaattatttaacctaacaaattccatc 363  Q
    |||||||||||||||||||  ||||||||||||||| ||||||||||| || ||||||||||||||| |||  || ||||||||||||| ||||| ||||    
T  5001627 ttatttattaattttgttaggtctgcagcaatttaaactaattttttctcgttcatttgctttattaggttaacagttatttaacctaaaaaatttcatc 5001528  T
Q  364 taa-aaaatgcatcgcaccaatttcattc 391  Q
    ||| |||||||||||||||||||| ||||    
T  5001527 taaaaaaatgcatcgcaccaatttaattc 5001499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 264 - 391
Target Start/End: Complemental strand, 28612551 - 28612424
Alignment:
Q  264 ttatttattaattttgttacctctgcagcaatttaacctaattttttcccgctcatttgctttattatgtttgcaattatttaacctaacaaattccatc 363  Q
    |||||||||||||||||||   ||||| ||||||||||||||||||||| |||||||| |||||||| ||||||||||| ||||||||| |||||  |||    
T  28612551 ttatttattaattttgttagg-ctgcaacaatttaacctaattttttccagctcattttctttattaggtttgcaattacttaacctaaaaaattttatc 28612453  T
Q  364 t-aaaaaatgcatcgcaccaatttcattc 391  Q
    | |||||||||||||||||||||||||||    
T  28612452 taaaaaaatgcatcgcaccaatttcattc 28612424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 267 - 390
Target Start/End: Original strand, 41326372 - 41326496
Alignment:
Q  267 tttattaattttgttacctctgcagcaatttaacctaattttttcccgctcatttgctttattatgtttgcaattatttaacctaacaaattccatct-a 365  Q
    ||||||||||||||||  |||||| ||||||||| |||||||| |||||||||||| ||||||| ||||||||||||||||||||| ||||   |||| |    
T  41326372 tttattaattttgttaggtctgcaacaatttaacttaatttttccccgctcatttgttttattaagtttgcaattatttaacctaataaatcttatctaa 41326471  T
Q  366 aaaaatgcatcgcaccaatttcatt 390  Q
    |||||||||||||||||||||||||    
T  41326472 aaaaatgcatcgcaccaatttcatt 41326496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 264 - 368
Target Start/End: Complemental strand, 44543821 - 44543717
Alignment:
Q  264 ttatttattaattttgttacctctgcagcaatttaacctaattttttcccgctcatttgctttattatgtttgcaattatttaacctaacaaattccatc 363  Q
    |||||||||||||||||||| || ||| |||||||||||||||||| |||||||||||||||||||  ||||||||||||||||||||| |||||| |||    
T  44543821 ttatttattaattttgttacgtccgcaacaatttaacctaatttttccccgctcatttgctttatttggtttgcaattatttaacctaaaaaattctatc 44543722  T
Q  364 taaaa 368  Q
    |||||    
T  44543721 taaaa 44543717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 264 - 355
Target Start/End: Original strand, 627537 - 627628
Alignment:
Q  264 ttatttattaattttgttacctctgcagcaatttaacctaattttttcccgctcatttgctttattatgtttgcaattatttaacctaacaa 355  Q
    |||||||||||||||||||| | ||||||||||||||||||||||||||||||||||| ||||||||  |||||||||||||||||||||||    
T  627537 ttatttattaattttgttacgtttgcagcaatttaacctaattttttcccgctcatttactttattacatttgcaattatttaacctaacaa 627628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 264 - 370
Target Start/End: Original strand, 12898023 - 12898129
Alignment:
Q  264 ttatttattaattttgttacctctgcagcaatttaacctaattttttcccgctcatttgctttattatgtttgcaattatttaacctaacaaattccatc 363  Q
    |||||||||||||||||||  |||||||||||||||||| || |||| |||||||||| |||| ||| |||||||||||||||| |||||||||||||||    
T  12898023 ttatttattaattttgttagatctgcagcaatttaacctgatatttttccgctcatttactttgttaggtttgcaattatttaatctaacaaattccatc 12898122  T
Q  364 taaaaaa 370  Q
    |||||||    
T  12898123 taaaaaa 12898129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 266 - 391
Target Start/End: Original strand, 29549960 - 29550086
Alignment:
Q  266 atttattaattttgttacctctgcagcaatttaacctaattttttcccgctcatttgctttattatgtttgcaattatttaacctaacaaattccatct- 364  Q
    |||||||||||||||||  ||||||  ||||||||||||||||||| || ||||||||||||||| |||||  ||||||||||||||||||||| || |     
T  29549960 atttattaattttgttaggtctgcactaatttaacctaattttttctcgttcatttgctttattaggtttgttattatttaacctaacaaattctattta 29550059  T
Q  365 aaaaaatgcatcgcaccaatttcattc 391  Q
    ||||||||||||||||| |||||||||    
T  29550060 aaaaaatgcatcgcaccgatttcattc 29550086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 265 - 358
Target Start/End: Complemental strand, 5013301 - 5013208
Alignment:
Q  265 tatttattaattttgttacctctgcagcaatttaacctaattttttcccgctcatttgctttattatgtttgcaattatttaacctaacaaatt 358  Q
    ||||||||||||||||||| |||||||||||||||||||| ||||||||||||||||||||||||| |||| |||||||||||  |||||||||    
T  5013301 tatttattaattttgttacgtctgcagcaatttaacctaaatttttcccgctcatttgctttattaggtttacaattatttaatttaacaaatt 5013208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 69; E-Value: 8e-31
Query Start/End: Original strand, 264 - 368
Target Start/End: Complemental strand, 44544032 - 44543928
Alignment:
Q  264 ttatttattaattttgttacctctgcagcaatttaacctaattttttcccgctcatttgctttattatgtttgcaattatttaacctaacaaattccatc 363  Q
    |||||||||||||||||||| || ||| ||||||||| |||||||||||| ||||||||| |||||| ||||| ||||||||||||||| ||||||||||    
T  44544032 ttatttattaattttgttacgtccgcaacaatttaacataattttttcccactcatttgcattattaagtttgtaattatttaacctaataaattccatc 44543933  T
Q  364 taaaa 368  Q
    |||||    
T  44543932 taaaa 44543928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 264 - 390
Target Start/End: Complemental strand, 3249688 - 3249561
Alignment:
Q  264 ttatttattaattttgttacctctgcagcaatttaacctaattttttcccgctcatttgctttattatgtttgcaattatttaacctaacaaattccatc 363  Q
    |||||||||||||||||||  ||||||||||||||| ||||| |||||||||||||||||| ||||| |||  || | |||||||||||||| || ||||    
T  3249688 ttatttattaattttgttaggtctgcagcaatttaagctaatattttcccgctcatttgctatattaggttaacagtaatttaacctaacaattttcatc 3249589  T
Q  364 taa-aaaatgcatcgcaccaatttcatt 390  Q
    ||| ||||| ||||||||||||||||||    
T  3249588 taaaaaaatacatcgcaccaatttcatt 3249561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 302 - 391
Target Start/End: Complemental strand, 5001442 - 5001352
Alignment:
Q  302 taattttttcccgctcatttgctttattatgtttgcaattatttaacctaacaaattccatctaa-aaaatgcatcgcaccaatttcattc 391  Q
    |||||||||| |||||||||||||||||| ||||||||||||||||||||| || |||||||||| |||||||||||||||||||||||||    
T  5001442 taattttttctcgctcatttgctttattaggtttgcaattatttaacctaaaaagttccatctaaaaaaatgcatcgcaccaatttcattc 5001352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 302 - 391
Target Start/End: Complemental strand, 5013112 - 5013022
Alignment:
Q  302 taattttttcccgctcatttgctttattatgtttgcaattatttaacctaacaaattccatctaa-aaaatgcatcgcaccaatttcattc 391  Q
    |||||||||| |||||||||||||||||| ||||||||||||||||||||| || |||||||||| |||||||||||||||||||||||||    
T  5013112 taattttttctcgctcatttgctttattaggtttgcaattatttaacctaaaaagttccatctaaaaaaatgcatcgcaccaatttcattc 5013022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 264 - 391
Target Start/End: Original strand, 29549791 - 29549919
Alignment:
Q  264 ttatttattaattttgttacctctgcagcaatttaacctaattttttcccgctcatttgctttattatgtttgcaattatttaacctaacaaattccatc 363  Q
    |||||||| ||||||||||  ||| || | ||||||| || |||||| ||||||||||||||||||| |||| |||||||||||||||| ||||| ||||    
T  29549791 ttatttatgaattttgttaggtctacaaccatttaacttattttttttccgctcatttgctttattaggtttacaattatttaacctaataaatttcatc 29549890  T
Q  364 t-aaaaaatgcatcgcaccaatttcattc 391  Q
    | |||||||||| ||||||||||||||||    
T  29549891 taaaaaaatgcaccgcaccaatttcattc 29549919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 317 - 393
Target Start/End: Original strand, 627629 - 627706
Alignment:
Q  317 catttgctttattatgtttgcaattatttaacctaacaaattccatct-aaaaaatgcatcgcaccaatttcattcat 393  Q
    ||||| |||||||| ||||||||||||||||||||||||||| ||||| |||||||||||||||||||||||||||||    
T  627629 catttactttattacgtttgcaattatttaacctaacaaatttcatctaaaaaaatgcatcgcaccaatttcattcat 627706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 286 - 391
Target Start/End: Original strand, 11657474 - 11657576
Alignment:
Q  286 ctgcagcaatttaacctaattttttcccgctcatttgctttattatgtttgcaattatttaacctaacaaattccatct-aaaaaatgcatcgcaccaat 384  Q
    |||||||| ||||||||||||||||| || |||||||||   ||| |||||||||||||||| |||||||||| ||||| ||||||||||||||||||||    
T  11657474 ctgcagcattttaacctaattttttctcgttcatttgct---ttaggtttgcaattatttaa-ctaacaaatttcatctaaaaaaatgcatcgcaccaat 11657569  T
Q  385 ttcattc 391  Q
    |||||||    
T  11657570 ttcattc 11657576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 264 - 386
Target Start/End: Complemental strand, 12896532 - 12896407
Alignment:
Q  264 ttatttattaattttgttacctctgcagcaatttaacctaattttttcccgctcatttgctttattatgtttgcaattatttaacctaacaaattccat- 362  Q
    |||||||||||||||||||  ||| || ||||||||| |||| |||| ||||||||||| ||||||| |||||||||||||||| |||| |||||||||     
T  12896532 ttatttattaattttgttatgtctacaacaatttaacttaatctttttccgctcatttgttttattaggtttgcaattatttaatctaataaattccata 12896433  T
Q  363 --ctaaaaaatgcatcgcaccaattt 386  Q
        |||||||||||||||| |||||    
T  12896432 aaaaaaaaaatgcatcgcactaattt 12896407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 306 - 391
Target Start/End: Original strand, 6347935 - 6348020
Alignment:
Q  306 tttttcccgctcatttgctttattatgtttgcaattatttaacctaacaaattccatctaaaaaa-tgcatcgcaccaatttcattc 391  Q
    ||||||||||||||||||||||||| |||| |||||||||||||||||||||| ||||||||||| |  ||||||||||||||||||    
T  6347935 tttttcccgctcatttgctttatta-gtttacaattatttaacctaacaaatttcatctaaaaaattatatcgcaccaatttcattc 6348020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 327 - 391
Target Start/End: Original strand, 20708899 - 20708964
Alignment:
Q  327 attatgtttgcaattatttaacctaacaaattccatctaaa-aaatgcatcgcaccaatttcattc 391  Q
    |||| ||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||    
T  20708899 attaagtttgcaattatttaacctaacaaatttcatctaaataaatgcatcgcaccaatttcattc 20708964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 285 - 371
Target Start/End: Original strand, 19640327 - 19640414
Alignment:
Q  285 tctgcagcaatttaacctaattttttcc-cgctcatttgctttattatgtttgcaattatttaacctaacaaattccatctaaaaaat 371  Q
    ||||||||||||||| ||||||||||   || ||||||  ||||||  ||||||||||||||||||||| ||||||||||||||||||    
T  19640327 tctgcagcaatttaatctaatttttttttcgttcatttattttattgggtttgcaattatttaacctaataaattccatctaaaaaat 19640414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 285 - 371
Target Start/End: Original strand, 19838920 - 19839007
Alignment:
Q  285 tctgcagcaatttaacctaattttttcc-cgctcatttgctttattatgtttgcaattatttaacctaacaaattccatctaaaaaat 371  Q
    ||||||||||||||| ||||||||||   || ||||||  ||||||  ||||||||||||||||||||| ||||||||||||||||||    
T  19838920 tctgcagcaatttaatctaatttttttttcgttcatttattttattgggtttgcaattatttaacctaataaattccatctaaaaaat 19839007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 338 - 391
Target Start/End: Complemental strand, 44543714 - 44543660
Alignment:
Q  338 aattatttaacctaacaaattccatctaaaa-aatgcatcgcaccaatttcattc 391  Q
    ||||||||||||||||||||| ||||||||| |||||||| ||||||||||||||    
T  44543714 aattatttaacctaacaaatttcatctaaaagaatgcatcacaccaatttcattc 44543660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 264 - 335
Target Start/End: Complemental strand, 2132309 - 2132238
Alignment:
Q  264 ttatttattaattttgttacctctgcagcaatttaacctaattttttcccgctcatttgctttattatgttt 335  Q
    ||||||||||| |||||||  |||||| ||||||||||||||||||  | ||||||||||||| ||| ||||    
T  2132309 ttatttattaagtttgttaggtctgcaacaatttaacctaatttttctctgctcatttgcttttttaggttt 2132238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 221 - 261
Target Start/End: Original strand, 966889 - 966929
Alignment:
Q  221 tgtacaatggggtgtatgagtaaagggtgttcatgtaacat 261  Q
    |||||||| |||||||||| |||||||||||||||||||||    
T  966889 tgtacaatagggtgtatgattaaagggtgttcatgtaacat 966929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 221 - 261
Target Start/End: Complemental strand, 1750459 - 1750419
Alignment:
Q  221 tgtacaatggggtgtatgagtaaagggtgttcatgtaacat 261  Q
    |||||||||||||||| || |||||||||||||||||||||    
T  1750459 tgtacaatggggtgtaggaataaagggtgttcatgtaacat 1750419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 221 - 261
Target Start/End: Original strand, 11825709 - 11825749
Alignment:
Q  221 tgtacaatggggtgtatgagtaaagggtgttcatgtaacat 261  Q
    |||||||| |||||||||| |||||||||||||||||||||    
T  11825709 tgtacaatagggtgtatgattaaagggtgttcatgtaacat 11825749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 221 - 261
Target Start/End: Complemental strand, 16804013 - 16803973
Alignment:
Q  221 tgtacaatggggtgtatgagtaaagggtgttcatgtaacat 261  Q
    |||||||| |||||||||| |||||||||||||||||||||    
T  16804013 tgtacaatagggtgtatgattaaagggtgttcatgtaacat 16803973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 221 - 261
Target Start/End: Complemental strand, 16843295 - 16843255
Alignment:
Q  221 tgtacaatggggtgtatgagtaaagggtgttcatgtaacat 261  Q
    |||||||| |||||||||| |||||||||||||||||||||    
T  16843295 tgtacaatagggtgtatgattaaagggtgttcatgtaacat 16843255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 221 - 261
Target Start/End: Complemental strand, 18491750 - 18491710
Alignment:
Q  221 tgtacaatggggtgtatgagtaaagggtgttcatgtaacat 261  Q
    |||||||| |||||||||| |||||||||||||||||||||    
T  18491750 tgtacaatagggtgtatgattaaagggtgttcatgtaacat 18491710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 221 - 261
Target Start/End: Original strand, 41282029 - 41282069
Alignment:
Q  221 tgtacaatggggtgtatgagtaaagggtgttcatgtaacat 261  Q
    |||||||| |||||||||| |||||||||||||||||||||    
T  41282029 tgtacaatagggtgtatgattaaagggtgttcatgtaacat 41282069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 221 - 261
Target Start/End: Complemental strand, 43114602 - 43114562
Alignment:
Q  221 tgtacaatggggtgtatgagtaaagggtgttcatgtaacat 261  Q
    |||||||| |||||||||| |||||||||||||||||||||    
T  43114602 tgtacaatagggtgtatgattaaagggtgttcatgtaacat 43114562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 264 - 386
Target Start/End: Complemental strand, 17930585 - 17930465
Alignment:
Q  264 ttatttattaattttgttacctctgcagcaatttaacctaattttttcccgctcatttgctttattatgtttgcaattatttaacctaacaaattccatc 363  Q
    ||||||||||||||| |||  |||||| ||| ||||||||||  || |||  | |  ||||  |||| |||||||   ||||||||||||||||||||||    
T  17930585 ttatttattaattttattaggtctgcaacaacttaacctaataattcccctttaaaatgctgaattaggtttgcagcaatttaacctaacaaattccatc 17930486  T
Q  364 taaaaaatgcatcgcaccaattt 386  Q
    |  |||||||| |||||||||||    
T  17930485 t--aaaatgcaacgcaccaattt 17930465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 223 - 261
Target Start/End: Complemental strand, 7070459 - 7070421
Alignment:
Q  223 tacaatggggtgtatgagtaaagggtgttcatgtaacat 261  Q
    ||||||||| ||||||| |||||||||||||||||||||    
T  7070459 tacaatgggatgtatgaataaagggtgttcatgtaacat 7070421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 342 - 386
Target Start/End: Complemental strand, 15256590 - 15256548
Alignment:
Q  342 atttaacctaacaaattccatctaaaaaatgcatcgcaccaattt 386  Q
    |||||||||||||||||||||||  |||||||| |||||||||||    
T  15256590 atttaacctaacaaattccatct--aaaatgcaacgcaccaattt 15256548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 295 - 336
Target Start/End: Original strand, 17370109 - 17370150
Alignment:
Q  295 tttaacctaattttttcccgctcatttgctttattatgtttg 336  Q
    |||||||||||||| ||||||||||||| ||||||| |||||    
T  17370109 tttaacctaattttctcccgctcatttgttttattaggtttg 17370150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 264 - 320
Target Start/End: Complemental strand, 20641700 - 20641641
Alignment:
Q  264 ttatttattaattttgttacc---tctgcagcaatttaacctaattttttcccgctcatt 320  Q
    |||||||||||||||||||     |||||| ||| |||||||||||||||||||||||||    
T  20641700 ttatttattaattttgttattaggtctgcaacaagttaacctaattttttcccgctcatt 20641641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 221 - 261
Target Start/End: Original strand, 4299475 - 4299515
Alignment:
Q  221 tgtacaatggggtgtatgagtaaagggtgttcatgtaacat 261  Q
    |||||||| |||||||||| |||||||||||||| ||||||    
T  4299475 tgtacaatagggtgtatgattaaagggtgttcatataacat 4299515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 365 - 393
Target Start/End: Original strand, 11736228 - 11736256
Alignment:
Q  365 aaaaaatgcatcgcaccaatttcattcat 393  Q
    |||||||||||||||||||||||||||||    
T  11736228 aaaaaatgcatcgcaccaatttcattcat 11736256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 221 - 261
Target Start/End: Original strand, 12302308 - 12302348
Alignment:
Q  221 tgtacaatggggtgtatgagtaaagggtgttcatgtaacat 261  Q
    ||||||||||||||||  | |||||||||||||||||||||    
T  12302308 tgtacaatggggtgtagaaataaagggtgttcatgtaacat 12302348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 221 - 261
Target Start/End: Original strand, 12415515 - 12415555
Alignment:
Q  221 tgtacaatggggtgtatgagtaaagggtgttcatgtaacat 261  Q
    ||||||||  ||||||||| |||||||||||||||||||||    
T  12415515 tgtacaataaggtgtatgattaaagggtgttcatgtaacat 12415555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 221 - 261
Target Start/End: Original strand, 12427575 - 12427615
Alignment:
Q  221 tgtacaatggggtgtatgagtaaagggtgttcatgtaacat 261  Q
    ||||||||  ||||||||| |||||||||||||||||||||    
T  12427575 tgtacaataaggtgtatgattaaagggtgttcatgtaacat 12427615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #56
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 221 - 261
Target Start/End: Complemental strand, 16096792 - 16096752
Alignment:
Q  221 tgtacaatggggtgtatgagtaaagggtgttcatgtaacat 261  Q
    |||| ||||||||||| || |||||||||||||||||||||    
T  16096792 tgtataatggggtgtaggaataaagggtgttcatgtaacat 16096752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #57
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 221 - 261
Target Start/End: Original strand, 34817831 - 34817871
Alignment:
Q  221 tgtacaatggggtgtatgagtaaagggtgttcatgtaacat 261  Q
    ||||||||| ||||| ||| |||||||||||||||||||||    
T  34817831 tgtacaatgaggtgtgtgaataaagggtgttcatgtaacat 34817871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #58
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 221 - 261
Target Start/End: Original strand, 43490456 - 43490496
Alignment:
Q  221 tgtacaatggggtgtatgagtaaagggtgttcatgtaacat 261  Q
    ||||||||||| |||| || |||||||||||||||||||||    
T  43490456 tgtacaatgggatgtaggaataaagggtgttcatgtaacat 43490496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 100; Significance: 2e-49; HSPs: 65)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 264 - 391
Target Start/End: Original strand, 1197878 - 1198005
Alignment:
Q  264 ttatttattaattttgttacctctgcagcaatttaacctaattttttcccgctcatttgctttattatgtttgcaattatttaacctaacaaattccatc 363  Q
    |||||||||||||||||||  ||||||||||||||||||||| |||||||||||||||||||||||| | ||||||||||||||||||||||||| ||||    
T  1197878 ttatttattaattttgttaggtctgcagcaatttaacctaatcttttcccgctcatttgctttattagggttgcaattatttaacctaacaaatttcatc 1197977  T
Q  364 taaaaaatgcatcgcaccaatttcattc 391  Q
    |||||||||||||||| |||||||||||    
T  1197978 taaaaaatgcatcgcatcaatttcattc 1198005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 98; E-Value: 4e-48
Query Start/End: Original strand, 267 - 391
Target Start/End: Complemental strand, 27853773 - 27853648
Alignment:
Q  267 tttattaattttgttacctctgcagcaatttaacctaattttttcccgctcatttgctttattatgtttgcaattatttaacctaacaaattccatctaa 366  Q
    ||||||||||||||||  |||| |||||||||||||||||||||||||||||||| |||||||| |||||||||||||||||||||||||||||||||||    
T  27853773 tttattaattttgttatgtctgtagcaatttaacctaattttttcccgctcatttactttattaggtttgcaattatttaacctaacaaattccatctaa 27853674  T
Q  367 -aaaatgcatcgcaccaatttcattc 391  Q
     |||||||||||||||||||||||||    
T  27853673 aaaaatgcatcgcaccaatttcattc 27853648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 264 - 370
Target Start/End: Complemental strand, 23828233 - 23828127
Alignment:
Q  264 ttatttattaattttgttacctctgcagcaatttaacctaattttttcccgctcatttgctttattatgtttgcaattatttaacctaacaaattccatc 363  Q
    |||||||||||||||||||  |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  23828233 ttatttattaattttgttaggtctgcagcaatttaacctaattttttcccgctcatttgctttattaggtttgcaattatttaacctaacaaattccatc 23828134  T
Q  364 taaaaaa 370  Q
    |||||||    
T  23828133 taaaaaa 23828127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 262 - 391
Target Start/End: Complemental strand, 23838451 - 23838321
Alignment:
Q  262 ctttatttattaattttgttacctctgcagcaatttaacct-aattttttcccgctcatttgctttattatgtttgcaattatttaacctaacaaattcc 360  Q
    |||||||||||||||||||||  |||||||||||||||||| ||||||||||||||||||||||||||||  |||||||||||||||||||||||||| |    
T  23838451 ctttatttattaattttgttaggtctgcagcaatttaaccttaattttttcccgctcatttgctttattagttttgcaattatttaacctaacaaattgc 23838352  T
Q  361 atctaaaaaatgcatcgcaccaatttcattc 391  Q
    |||||||||| ||||| ||||||||||||||    
T  23838351 atctaaaaaaagcatctcaccaatttcattc 23838321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 93; E-Value: 4e-45
Query Start/End: Original strand, 264 - 391
Target Start/End: Complemental strand, 3459241 - 3459113
Alignment:
Q  264 ttatttattaattttgttacctctgcagcaatttaacctaattttttcccgctcatttgctttattatgtttgcaattatttaacctaacaaattccatc 363  Q
    ||||||| |||||||||||| |||||||||||||||| ||||||||||||||||||||||||||||| |||||||||||||||| |||||||||| ||||    
T  3459241 ttatttactaattttgttacgtctgcagcaatttaacataattttttcccgctcatttgctttattaggtttgcaattatttaatctaacaaatttcatc 3459142  T
Q  364 taa-aaaatgcatcgcaccaatttcattc 391  Q
    ||| ||||||||||||| |||||||||||    
T  3459141 taaaaaaatgcatcgcatcaatttcattc 3459113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 259 - 391
Target Start/End: Original strand, 23085855 - 23085989
Alignment:
Q  259 catctttatttattaattttgttacctctgcagcaatttaacctaattttttcccgctcatttgctttattatgtttgcaattatttaacctaacaaatt 358  Q
    |||| |||||||||||||||||||  |||||| |||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||| |||||    
T  23085855 catcattatttattaattttgttaggtctgcaacaatttaacctaattttttcccactcatttgctttattaggtttgcaattatttaacctaataaatt 23085954  T
Q  359 ccatct--aaaaaatgcatcgcaccaatttcattc 391  Q
    ||||||  ||||||| |||||||||||||||||||    
T  23085955 ccatctaaaaaaaatacatcgcaccaatttcattc 23085989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 264 - 391
Target Start/End: Complemental strand, 29580144 - 29580017
Alignment:
Q  264 ttatttattaattttgttacctctgcagcaatttaacctaattttttcccgctcatttgctttattatgtttgcaattatttaacctaacaaattccatc 363  Q
    |||||||||||||||||||| | |||| ||||||||||||||||||||||||||||||| ||||||| |||||||||||||||| |||||| ||| ||||    
T  29580144 ttatttattaattttgttacgtatgcatcaatttaacctaattttttcccgctcatttgttttattaggtttgcaattatttaaactaacacatttcatc 29580045  T
Q  364 taaaaaatgcatcgcaccaatttcattc 391  Q
    |||||| |||||||||||||||||||||    
T  29580044 taaaaattgcatcgcaccaatttcattc 29580017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 89; E-Value: 9e-43
Query Start/End: Original strand, 260 - 391
Target Start/End: Complemental strand, 23960909 - 23960778
Alignment:
Q  260 atctttatttattaattttgttacctctgcagcaatttaacctaattttttcccgctcatttgctttattatgtttgcaattatttaacctaacaaattc 359  Q
    ||||||||||| |||||||||||| ||||||||||||||||||||||||||||  |||||||||||||||| ||||| ||||||||||||||||||||||    
T  23960909 atctttatttaataattttgttacgtctgcagcaatttaacctaattttttcca-ctcatttgctttattaggtttgtaattatttaacctaacaaattc 23960811  T
Q  360 catctaaaaaatg-catcgcaccaatttcattc 391  Q
    ||||||||||| | ||||||| |||||||||||    
T  23960810 catctaaaaaaagacatcgcatcaatttcattc 23960778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 89; E-Value: 9e-43
Query Start/End: Original strand, 264 - 390
Target Start/End: Original strand, 32062815 - 32062945
Alignment:
Q  264 ttatttattaattttgttacct--ctgcagcaatttaacctaattttttcccgctcatttgctttattatgtttgcaattatttaacctaacaaattcca 361  Q
    |||||||||||||||||||| |  |||||||||||||| |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| ||    
T  32062815 ttatttattaattttgttacgttgctgcagcaatttaaactaattttttcccgctcatttgctttattaggtttgcaattatttaacctaacaaatttca 32062914  T
Q  362 tct--aaaaaatgcatcgcaccaatttcatt 390  Q
    |||  ||||||||||| ||||||||||||||    
T  32062915 tctaaaaaaaatgcattgcaccaatttcatt 32062945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 89; E-Value: 9e-43
Query Start/End: Original strand, 264 - 391
Target Start/End: Complemental strand, 37198404 - 37198276
Alignment:
Q  264 ttatttattaattttgttacctctgcagcaatttaacctaattttttcccgctcatttgctttattatgtttgcaattatttaacctaacaaattccatc 363  Q
    |||||||||||||||||||| |||||| ||||||||||||||||||| ||||||||||||||||||  |||| ||||| |||||||||||||||||||||    
T  37198404 ttatttattaattttgttacgtctgcaacaatttaacctaatttttttccgctcatttgctttattcggttttcaattgtttaacctaacaaattccatc 37198305  T
Q  364 taa-aaaatgcatcgcaccaatttcattc 391  Q
    ||| ||||||||| |||||||||||||||    
T  37198304 taaaaaaatgcattgcaccaatttcattc 37198276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 264 - 391
Target Start/End: Original strand, 33198833 - 33198960
Alignment:
Q  264 ttatttattaattttgttacctctgcagcaatttaacctaattttttcccgctcatttgctttattatgtttgcaattatttaacctaacaaattccatc 363  Q
    |||||||||||||||||||  ||||||||||||||||||||| |||| ||||||||||||| ||||| |||  || | ||||||||||||||||||||||    
T  33198833 ttatttattaattttgttaggtctgcagcaatttaacctaatatttttccgctcatttgctgtattaggttaacagtgatttaacctaacaaattccatc 33198932  T
Q  364 taaaaaatgcatcgcaccaatttcattc 391  Q
    ||||||||||||||||||||||||||||    
T  33198933 taaaaaatgcatcgcaccaatttcattc 33198960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 264 - 391
Target Start/End: Original strand, 35617681 - 35617811
Alignment:
Q  264 ttatttattaattttgttacctctgca-gcaatttaacctaattttttcccgctcatttgctttattatgtttgcaattatttaacctaacaaattccat 362  Q
    |||||||||||||||||||| |||||| |||||||||| ||||||||||||||||||||| ||||||| |||||||||||||||||||||||||||| ||    
T  35617681 ttatttattaattttgttacgtctgcaagcaatttaacttaattttttcccgctcatttgttttattaggtttgcaattatttaacctaacaaattctat 35617780  T
Q  363 ct--aaaaaatgcatcgcaccaatttcattc 391  Q
    ||  |||||||||||||||| ||||||||||    
T  35617781 ctaaaaaaaatgcatcgcactaatttcattc 35617811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 264 - 390
Target Start/End: Complemental strand, 37410178 - 37410051
Alignment:
Q  264 ttatttattaattttgttacctctgcagcaatttaacctaattttttcccgctcatttgctttattatgtttgcaattatttaacctaacaaattccatc 363  Q
    ||||||||||||||| |||| | |||||||||||||| ||||||||| ||||||||||||||||||| ||||||||||||||||||||||||||| ||||    
T  37410178 ttatttattaattttattacgtttgcagcaatttaacttaatttttttccgctcatttgctttattaggtttgcaattatttaacctaacaaatttcatc 37410079  T
Q  364 taaaaa-atgcatcgcaccaatttcatt 390  Q
    |||||| ||||||||||| |||||||||    
T  37410078 taaaaagatgcatcgcacaaatttcatt 37410051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 266 - 391
Target Start/End: Complemental strand, 39922192 - 39922066
Alignment:
Q  266 atttattaattttgttacctctgcagcaatttaacctaattttttcccgctcatttgctttattatgtttgcaattatttaacctaacaaattccatcta 365  Q
    ||||||||| |||||||| |||||||||||||||| ||||||||||||||||||||| ||||||| ||||||||||||||||||||||||||||||||||    
T  39922192 atttattaactttgttacgtctgcagcaatttaacttaattttttcccgctcatttgttttattaggtttgcaattatttaacctaacaaattccatcta 39922093  T
Q  366 a-aaaatgcatcgcaccaatttcattc 391  Q
    | |||||| || |||||||||| ||||    
T  39922092 aaaaaatgtattgcaccaattttattc 39922066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 86; E-Value: 5e-41
Query Start/End: Original strand, 259 - 391
Target Start/End: Complemental strand, 40399605 - 40399472
Alignment:
Q  259 catctttatttattaattttgttacctctgcagcaatttaacctaattttttcccgctcatttgctttattatgtttgcaattatttaacctaacaaatt 358  Q
    |||| |||| |||||||||| |||  | || ||||||||||||||||||||||||||||||||| ||||||| ||||| |||||||||||||||||||||    
T  40399605 catccttatgtattaatttttttatgtatgtagcaatttaacctaattttttcccgctcatttgttttattaggtttgtaattatttaacctaacaaatt 40399506  T
Q  359 ccatctaa-aaaatgcatcgcaccaatttcattc 391  Q
    |||||||| |||||||||||||||||||||||||    
T  40399505 ccatctaaaaaaatgcatcgcaccaatttcattc 40399472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 292 - 391
Target Start/End: Original strand, 38111372 - 38111472
Alignment:
Q  292 caatttaacctaattttttcccgctcatttgctttattatgtttgcaattatttaacctaacaaattccatct-aaaaaatgcatcgcaccaatttcatt 390  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| |||||||||||||| ||||||||||||||||||||||||||    
T  38111372 caatttaacctaattttttcccgctcatttgctttattaggtttgcaattatttaacccaacaaattccatctgaaaaaatgcatcgcaccaatttcatt 38111471  T
Q  391 c 391  Q
    |    
T  38111472 c 38111472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 84; E-Value: 8e-40
Query Start/End: Original strand, 264 - 391
Target Start/End: Original strand, 44429050 - 44429177
Alignment:
Q  264 ttatttattaattttgttacctctgcagcaatttaacctaattttttcccgctcatttgctttattatgtttgcaattatttaacctaacaaattccatc 363  Q
    |||||||||||||||||||  ||| || ||| |||||||||| ||||||| |||||||||||||||| ||  ||||| ||||||||||||||||||||||    
T  44429050 ttatttattaattttgttaggtctccaacaacttaacctaatattttccctctcatttgctttattaggtaagcaataatttaacctaacaaattccatc 44429149  T
Q  364 taaaaaatgcatcgcaccaatttcattc 391  Q
    ||||||||||||||||||||||||||||    
T  44429150 taaaaaatgcatcgcaccaatttcattc 44429177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 264 - 370
Target Start/End: Complemental strand, 23831051 - 23830945
Alignment:
Q  264 ttatttattaattttgttacctctgcagcaatttaacctaattttttcccgctcatttgctttattatgtttgcaattatttaacctaacaaattccatc 363  Q
    |||||||||||||||||||  | ||||| |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| ||||    
T  23831051 ttatttattaattttgttaggtgtgcagaaatttaacctaattttttcccgctcatttgctttattaggtttgcaattatttaacctaacaaattgcatc 23830952  T
Q  364 taaaaaa 370  Q
    |||||||    
T  23830951 taaaaaa 23830945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 264 - 391
Target Start/End: Complemental strand, 23960687 - 23960560
Alignment:
Q  264 ttatttattaattttgttacctctgcagcaatttaacctaattttttcccgctcatttgctttattatgtttgcaattatttaacctaacaaattccatc 363  Q
    |||||||||||||||||||| |||||| ||||||||| ||||||||| | ||||||| ||||||||| |||| |||||||||||||||||||||| ||||    
T  23960687 ttatttattaattttgttacgtctgcaacaatttaacttaatttttttctgctcatt-gctttattaggtttacaattatttaacctaacaaatttcatc 23960589  T
Q  364 taa-aaaatgcatcgcaccaatttcattc 391  Q
    ||| |||||||||||||||||||||||||    
T  23960588 taaaaaaatgcatcgcaccaatttcattc 23960560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 292 - 391
Target Start/End: Original strand, 34947504 - 34947603
Alignment:
Q  292 caatttaacctaattttttcccgctcatttgctttattatgtttgcaattatttaacctaacaaattccatctaaaaaatgcatcgcaccaatttcattc 391  Q
    ||||||||||||||||||| ||||||||||||||||||| ||||| ||||||||||||||||||||| ||||||||||||||||||||| ||||||||||    
T  34947504 caatttaacctaatttttttccgctcatttgctttattaggtttgaaattatttaacctaacaaatttcatctaaaaaatgcatcgcacaaatttcattc 34947603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 264 - 391
Target Start/End: Complemental strand, 30439151 - 30439021
Alignment:
Q  264 ttatttattaattttgttacctctgcagcaatttaacctaattttttc---ccgctcatttgctttattatgtttgcaattatttaacctaacaaattcc 360  Q
    |||||||||||||||||||  |||||| |||||||| ||||||||||    | | ||||||||||||||| ||||||||||||||||||||||||||| |    
T  30439151 ttatttattaattttgttaggtctgcaacaatttaatctaattttttttttctgttcatttgctttattaggtttgcaattatttaacctaacaaatttc 30439052  T
Q  361 atctaaaaaatgcatcgcaccaatttcattc 391  Q
    |||||||||||||||||||||||||| ||||    
T  30439051 atctaaaaaatgcatcgcaccaattttattc 30439021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 264 - 391
Target Start/End: Complemental strand, 37198018 - 37197884
Alignment:
Q  264 ttatttattaattttgttacctctgcagcaatttaacctaattttttcccgctcatttgctttattat--------gtttgcaattatttaacctaacaa 355  Q
    |||||||||||||||||||| |||||||||||||||||||||||||  |||||||||| ||||||||         ||||||||||||||||||||||||    
T  37198018 ttatttattaattttgttacgtctgcagcaatttaacctaattttt--ccgctcattttctttattaatttattaggtttgcaattatttaacctaacaa 37197921  T
Q  356 attccatctaa-aaaatgcatcgcaccaatttcattc 391  Q
    ||||||||||| |||||||||||||||||||||||||    
T  37197920 attccatctaaaaaaatgcatcgcaccaatttcattc 37197884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 264 - 370
Target Start/End: Complemental strand, 37198220 - 37198113
Alignment:
Q  264 ttatttattaattttgttacctctgcagcaatttaacctaattttttc-ccgctcatttgctttattatgtttgcaattatttaacctaacaaattccat 362  Q
    |||||| ||||||||||||| ||||||||||||||||||||||||||  ||||||||||||||||||| ||||||||||||||||||||| |||||| ||    
T  37198220 ttattttttaattttgttacgtctgcagcaatttaacctaattttttttccgctcatttgctttattaggtttgcaattatttaacctaataaattctat 37198121  T
Q  363 ctaaaaaa 370  Q
    ||||||||    
T  37198120 ctaaaaaa 37198113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 264 - 386
Target Start/End: Complemental strand, 37197783 - 37197662
Alignment:
Q  264 ttatttattaattttgttacctctgcagcaatttaacctaattttttcccgctcatttgctttattatgtttgcaattatttaacctaacaaattccatc 363  Q
    |||||||||||||||||||||||||||||||||||||||||  |||||| |||||||||||||||||  | |  ||||||||||||||||||||| ||||    
T  37197783 ttatttattaattttgttacctctgcagcaatttaacctaa--ttttcctgctcatttgctttattaaatataaaattatttaacctaacaaatttcatc 37197686  T
Q  364 t-aaaaaatgcatcgcaccaattt 386  Q
    | ||||||||||| ||||||||||    
T  37197685 taaaaaaatgcatggcaccaattt 37197662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 69; E-Value: 8e-31
Query Start/End: Original strand, 264 - 391
Target Start/End: Original strand, 13797442 - 13797570
Alignment:
Q  264 ttatttattaattttgttacctctgcagcaatttaacctaattttttcccgctcatttgctttattatgtttgcaattatttaacctaacaaattccatc 363  Q
    |||||||||||||||||||  | |||| ||| |||||||| |||||||| ||||||||||||||||| ||||||||||||||||| |||||||||| ||     
T  13797442 ttatttattaattttgttaggtttgcatcaacttaacctagttttttcctgctcatttgctttattaggtttgcaattatttaacttaacaaattcaatt 13797541  T
Q  364 t-aaaaaatgcatcgcaccaatttcattc 391  Q
    | |||||||| || |||||||||||||||    
T  13797542 taaaaaaatgtatggcaccaatttcattc 13797570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 264 - 391
Target Start/End: Original strand, 2084876 - 2085005
Alignment:
Q  264 ttatttattaattttgttacctctgcagcaatttaacctaattttttcccgctcatttgctttattatgtttgcaattatttaacctaacaaattccatc 363  Q
    |||||||||||||||||||  | |||||||| |||| ||||| ||||||| |||||||||| ||||| ||| | | | ||||||||||||||||||||||    
T  2084876 ttatttattaattttgttaggtttgcagcaacttaatctaatattttccctctcatttgctgtattaggttagtagtaatttaacctaacaaattccatc 2084975  T
Q  364 ta--aaaaatgcatcgcaccaatttcattc 391  Q
    ||  ||||||||||||||||||||||||||    
T  2084976 taagaaaaatgcatcgcaccaatttcattc 2085005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 260 - 370
Target Start/End: Original strand, 37426112 - 37426222
Alignment:
Q  260 atctttatttattaattttgttacctctgcagcaatttaacctaattttttcccgctcatttgctttattatgtttgcaattatttaacctaacaaattc 359  Q
    |||||||||||||||||||||||| | |||||||| |||  |||||||||| | |||||||| |||||||| |||||||||| |||||| ||||||||||    
T  37426112 atctttatttattaattttgttacgtttgcagcaagttagtctaatttttttcagctcatttactttattaggtttgcaattgtttaacataacaaattc 37426211  T
Q  360 catctaaaaaa 370  Q
    |||||||||||    
T  37426212 catctaaaaaa 37426222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 264 - 391
Target Start/End: Original strand, 44433629 - 44433757
Alignment:
Q  264 ttatttattaattttgttacctctgcagcaatttaacctaattttttcccgctcatttgctttattatgtttgcaattatttaacctaacaaattccatc 363  Q
    |||||||| ||||||||||  |||||||||| || || |||| ||||||| | |||||||| ||||||||| ||| | ||||||||||||||||| ||||    
T  44433629 ttatttatcaattttgttaggtctgcagcaacttcacttaatattttccctcccatttgctgtattatgttagcagtaatttaacctaacaaatttcatc 44433728  T
Q  364 t-aaaaaatgcatcgcaccaatttcattc 391  Q
    | |||||||||||||||||||||||||||    
T  44433729 taaaaaaatgcatcgcaccaatttcattc 44433757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 264 - 393
Target Start/End: Original strand, 44429894 - 44430024
Alignment:
Q  264 ttatttattaattttgttacctctgcagcaatttaacctaattttttcccgctcatttgctttattatgtttgcaattatttaacctaacaaattccatc 363  Q
    |||||||| ||||||||||  |||||||||| || || |||| ||||||| | |||||| | ||||||||| ||| | ||||||||||||||||| ||||    
T  44429894 ttatttatcaattttgttaggtctgcagcaacttcacttaatattttccctcccatttgttgtattatgttagcagtaatttaacctaacaaatttcatc 44429993  T
Q  364 t-aaaaaatgcatcgcaccaatttcattcat 393  Q
    | |||||||||||||||||||||||||||||    
T  44429994 taaaaaaatgcatcgcaccaatttcattcat 44430024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 272 - 390
Target Start/End: Original strand, 42045644 - 42045764
Alignment:
Q  272 taattttgttacctctgcagcaatttaacctaattttttcccgctcatttgctttatta--tgtttgcaattatttaacctaacaaattccatct-aaaa 368  Q
    |||||||||||| ||||||||||||||||||||||||||   |||||||| |||| |||   ||||||||||||||||||||||||||| ||||| ||||    
T  42045644 taattttgttacgtctgcagcaatttaacctaatttttt-ttgctcatttactttgttaagagtttgcaattatttaacctaacaaatttcatctaaaaa 42045742  T
Q  369 aatgcatcgcaccaatttcatt 390  Q
    |||||||| || ||||||||||    
T  42045743 aatgcatcacatcaatttcatt 42045764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 272 - 357
Target Start/End: Complemental strand, 18308343 - 18308258
Alignment:
Q  272 taattttgttacctctgcagcaatttaacctaattttttcccgctcatttgctttattatgtttgcaattatttaacctaacaaat 357  Q
    |||||||||||| ||||||  || |||||||||||||||||| |||||||||||||||| ||| ||||||||||||||||||||||    
T  18308343 taattttgttacatctgcaataacttaacctaattttttcccactcatttgctttattaggttcgcaattatttaacctaacaaat 18308258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 258 - 368
Target Start/End: Complemental strand, 43419138 - 43419032
Alignment:
Q  258 acatctttatttattaattttgttacctctgcagcaatttaacctaattttttcccgctcatttgctttattatgtttgcaattatttaacctaacaaat 357  Q
    ||||| |||||||||||||||||||| |||||| ||| |||| |||| ||||||||||||||||||||||||| ||||   | |||||||||||||||||    
T  43419138 acatccttatttattaattttgttacatctgcatcaacttaatctaa-tttttcccgctcatttgctttattaggttt---actatttaacctaacaaat 43419043  T
Q  358 tccatctaaaa 368  Q
    | |||||||||    
T  43419042 ttcatctaaaa 43419032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 264 - 330
Target Start/End: Complemental strand, 23838242 - 23838176
Alignment:
Q  264 ttatttattaattttgttacctctgcagcaatttaacctaattttttcccgctcatttgctttatta 330  Q
    |||||||||||||||||||  |||||| |||||||||||||||||||||||||||||||||||||||    
T  23838242 ttatttattaattttgttaggtctgcaacaatttaacctaattttttcccgctcatttgctttatta 23838176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 264 - 391
Target Start/End: Original strand, 33198603 - 33198729
Alignment:
Q  264 ttatttattaattttgttacctctgcagcaatttaacctaattttttcccgctcatttgctttattatgtttgcaattatttaacctaacaaattccatc 363  Q
    |||||||||||||||||||  || |||| ||||||||||||||||||    |||||||||| ||||| ||| ||| | ||||||||||||||||| ||||    
T  33198603 ttatttattaattttgttaggtcagcagtaatttaacctaatttttt--tactcatttgctgtattaggttagcactaatttaacctaacaaatttcatc 33198700  T
Q  364 taaaa-aatgcatcgcaccaatttcattc 391  Q
    ||||| |||||||||| | ||||||||||    
T  33198701 taaaacaatgcatcgcgcaaatttcattc 33198729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 264 - 393
Target Start/End: Complemental strand, 604781 - 604652
Alignment:
Q  264 ttatttattaattttgttacctctgcagcaatttaacctaattttttcccgctcatttgctttattatgtttgcaattatttaacctaacaaattccatc 363  Q
    |||||||||||||||||||  |||||||||| |||| | ||| ||| ||  || ||||||||||||| ||  ||| | ||||||||||||||||| ||||    
T  604781 ttatttattaattttgttaggtctgcagcaacttaatcgaatatttccctcct-atttgctttattaggtaagcagtaatttaacctaacaaatttcatc 604683  T
Q  364 taa-aaaatgcatcgcaccaatttcattcat 393  Q
    ||| ||||||||||||| |||||||||||||    
T  604682 taaaaaaatgcatcgcaacaatttcattcat 604652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 264 - 391
Target Start/End: Original strand, 44430067 - 44430196
Alignment:
Q  264 ttatttattaattttgttacctctgcagcaatttaacctaattttttcccgctcatttgctttattatgtttgcaattatttaacctaac-aaattccat 362  Q
    |||||||||||||||||||  |||||| ||| ||||| |||| ||||||| | |||||||||||||| ||  ||| | |||||||| ||| |||||||||    
T  44430067 ttatttattaattttgttaggtctgcaacaacttaacgtaatattttccctcccatttgctttattaggtaagcattaatttaacccaacaaaattccat 44430166  T
Q  363 c-taaaaaatgcatcgcaccaatttcattc 391  Q
    | | |||||||| |||||||||||||||||    
T  44430167 ctttaaaaatgcttcgcaccaatttcattc 44430196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 264 - 391
Target Start/End: Original strand, 44430418 - 44430547
Alignment:
Q  264 ttatttattaattttgttacctctgcagcaatttaacctaattttttcccgctcatttgctttattatgtttgcaattatttaacctaac-aaattccat 362  Q
    |||||||||||||||||||  |||||||||| |||||||| | ||||||| |||||||||||||| | ||  ||| | |||||||| ||| ||||| |||    
T  44430418 ttatttattaattttgttagatctgcagcaacttaacctactattttccctctcatttgctttatcaggtaagcagtaatttaacccaacaaaatttcat 44430517  T
Q  363 c-taaaaaatgcatcgcaccaatttcattc 391  Q
    | | |||||||| |||||||||||||||||    
T  44430518 cttgaaaaatgcttcgcaccaatttcattc 44430547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 264 - 391
Target Start/End: Original strand, 44433802 - 44433931
Alignment:
Q  264 ttatttattaattttgttacctctgcagcaatttaacctaattttttcccgctcatttgctttattatgtttgcaattatttaacctaac-aaattccat 362  Q
    |||||||||||||||||||  |||||| ||| ||||| |||| ||||||| | |||||||||||||| ||  ||| | |||||||| ||| |||||||||    
T  44433802 ttatttattaattttgttaggtctgcaacaacttaacgtaatattttccctcccatttgctttattaggtaagcattaatttaacccaacaaaattccat 44433901  T
Q  363 c-taaaaaatgcatcgcaccaatttcattc 391  Q
    | | |||||||| |||||||||||||||||    
T  44433902 ctttaaaaatgcttcgcaccaatttcattc 44433931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 343 - 391
Target Start/End: Original strand, 44014524 - 44014572
Alignment:
Q  343 tttaacctaacaaattccatctaaaaaatgcatcgcaccaatttcattc 391  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||    
T  44014524 tttaacctaacaaattccatctaaaaaatgcatcgcaccaatttcattc 44014572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 267 - 386
Target Start/End: Complemental strand, 604606 - 604485
Alignment:
Q  267 tttattaattttgttacctctgcagcaatttaacctaattttttcccgctc-atttgctttattatgtttgcaattatttaacctaacaaattccatcta 365  Q
    ||||||||||||||||  |||| ||||| |||||||||| ||||||| ||| ||||||| ||||| ||| ||| | ||||||| ||||||||| ||||||    
T  604606 tttattaattttgttagatctgtagcaacttaacctaatattttccctctctatttgctgtattaggttagcagtaatttaacataacaaatttcatcta 604507  T
Q  366 aaa-aatgcatcgcaccaattt 386  Q
    ||| || ||||| |||||||||    
T  604506 aaacaaagcatcacaccaattt 604485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 319 - 391
Target Start/End: Complemental strand, 1276574 - 1276501
Alignment:
Q  319 tttgctttattatgtttgcaattatttaacctaacaaattccatctaaaa-aatgcatcgcaccaatttcattc 391  Q
    |||||||||||| |||||||||||||||||||||||||||  |||||||| ||| ||| |||||||||||||||    
T  1276574 tttgctttattaggtttgcaattatttaacctaacaaattgtatctaaaataattcattgcaccaatttcattc 1276501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 303 - 391
Target Start/End: Original strand, 3990184 - 3990273
Alignment:
Q  303 aattttttcccgctcatttgctttattatgtttgcaattatttaacctaacaaattccatct-aaaaaatgcatcgcaccaatttcattc 391  Q
    |||||||||||||||||||  ||  ||| ||||||||||||||||||||| ||||| ||||| |||||||| || |||||||||||||||    
T  3990184 aattttttcccgctcatttatttgtttaggtttgcaattatttaacctaataaattacatctaaaaaaatgaattgcaccaatttcattc 3990273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 264 - 391
Target Start/End: Original strand, 44429224 - 44429353
Alignment:
Q  264 ttatttattaattttgttacctctgcagcaatttaacctaattttttcccgctcatttgctttattatgtttgcaattatttaacctaac-aaattccat 362  Q
    |||||||||||||||||||  |||||| ||| |||||||||| |||| || |||||||||||||||| ||  ||| | |||||||| ||| ||||| |||    
T  44429224 ttatttattaattttgttaggtctgcaacaacttaacctaatatttttcctctcatttgctttattaggtaagcagtaatttaacccaacaaaatttcat 44429323  T
Q  363 c-taaaaaatgcatcgcaccaatttcattc 391  Q
    | | |||||||| ||||| |||||||||||    
T  44429324 cttgaaaaatgcttcgcatcaatttcattc 44429353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 264 - 391
Target Start/End: Original strand, 44433976 - 44434105
Alignment:
Q  264 ttatttattaattttgttacctctgcagcaatttaacctaattttttcccgctcatttgctttattatgtttgcaattatttaacctaac-aaattccat 362  Q
    |||||||||||||||||||  |||||| ||| ||||||||||  |||||| | |||||||||||||| ||  ||| | |||||||| ||| ||||| |||    
T  44433976 ttatttattaattttgttaggtctgcaacaacttaacctaatactttccctcccatttgctttattaggtaagcagtaatttaacccaacaaaatttcat 44434075  T
Q  363 c-taaaaaatgcatcgcaccaatttcattc 391  Q
    | | |||||||| |||||||||||||||||    
T  44434076 cttgaaaaatgcttcgcaccaatttcattc 44434105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 264 - 320
Target Start/End: Complemental strand, 39922016 - 39921960
Alignment:
Q  264 ttatttattaattttgttacctctgcagcaatttaacctaattttttcccgctcatt 320  Q
    |||||||||||||||||||| |||||| ||||||||||||||||||||| |||||||    
T  39922016 ttatttattaattttgttacgtctgcaacaatttaacctaattttttcctgctcatt 39921960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 264 - 310
Target Start/End: Complemental strand, 37197834 - 37197788
Alignment:
Q  264 ttatttattaattttgttacctctgcagcaatttaacctaatttttt 310  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||    
T  37197834 ttatttattaattttgttacgtctgcagcaatttaacctaatttttt 37197788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 264 - 391
Target Start/End: Original strand, 44430241 - 44430370
Alignment:
Q  264 ttatttattaattttgttacctctgcagcaatttaacctaattttttcccgctcatttgctttattatgtttgcaattatttaacctaac-aaattccat 362  Q
    |||||||||||||||||||  |||||| ||| |||||||||| |||| || | ||||| |||||||| ||  ||| | |||||||| ||| ||||| |||    
T  44430241 ttatttattaattttgttaggtctgcaacaacttaacctaatatttttcctcccatttactttattaggtaagcagtaatttaacccaacaaaatttcat 44430340  T
Q  363 c-taaaaaatgcatcgcaccaatttcattc 391  Q
    | | |||||||| |||||||||||||||||    
T  44430341 cttgaaaaatgcttcgcaccaatttcattc 44430370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 259 - 313
Target Start/End: Original strand, 34345139 - 34345193
Alignment:
Q  259 catctttatttattaattttgttacctctgcagcaatttaacctaattttttccc 313  Q
    |||| ||||||||||||||| |||  |||||||||||||||||||||||||||||    
T  34345139 catccttatttattaattttattaggtctgcagcaatttaacctaattttttccc 34345193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 264 - 310
Target Start/End: Complemental strand, 39922272 - 39922226
Alignment:
Q  264 ttatttattaattttgttacctctgcagcaatttaacctaatttttt 310  Q
    |||||||||||||||||||| ||| ||||||||||||||||||||||    
T  39922272 ttatttattaattttgttacgtcttcagcaatttaacctaatttttt 39922226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 264 - 322
Target Start/End: Original strand, 44434153 - 44434211
Alignment:
Q  264 ttatttattaattttgttacctctgcagcaatttaacctaattttttcccgctcatttg 322  Q
    |||||||||||||||||||  |||||||||| |||||||||| ||||||| ||||||||    
T  44434153 ttatttattaattttgttagatctgcagcaacttaacctaatattttccctctcatttg 44434211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 333 - 391
Target Start/End: Original strand, 38111190 - 38111249
Alignment:
Q  333 tttgcaattatttaacctaacaaattccatct-aaaaaatgcatcgcaccaatttcattc 391  Q
    ||||||||| |||||||||||||| ||||||| |||||||| ||||| ||||||||||||    
T  38111190 tttgcaattgtttaacctaacaaaatccatctaaaaaaatgtatcgcgccaatttcattc 38111249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 342 - 391
Target Start/End: Complemental strand, 604875 - 604825
Alignment:
Q  342 atttaacctaacaaattccatctaa-aaaatgcatcgcaccaatttcattc 391  Q
    ||||||||||||||||| ||||||| |||||||||||||| ||||||||||    
T  604875 atttaacctaacaaatttcatctaaaaaaatgcatcgcacaaatttcattc 604825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 221 - 261
Target Start/End: Original strand, 30912617 - 30912657
Alignment:
Q  221 tgtacaatggggtgtatgagtaaagggtgttcatgtaacat 261  Q
    |||||||||||||||| || |||||||||||||||||||||    
T  30912617 tgtacaatggggtgtaggaataaagggtgttcatgtaacat 30912657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 221 - 261
Target Start/End: Complemental strand, 35181561 - 35181521
Alignment:
Q  221 tgtacaatggggtgtatgagtaaagggtgttcatgtaacat 261  Q
    |||||||| |||||||||| |||||||||||||||||||||    
T  35181561 tgtacaatagggtgtatgattaaagggtgttcatgtaacat 35181521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 221 - 261
Target Start/End: Complemental strand, 42699302 - 42699262
Alignment:
Q  221 tgtacaatggggtgtatgagtaaagggtgttcatgtaacat 261  Q
    |||||||||||||||| || |||||||||||||||||||||    
T  42699302 tgtacaatggggtgtaggaataaagggtgttcatgtaacat 42699262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #56
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 343 - 393
Target Start/End: Complemental strand, 605020 - 604969
Alignment:
Q  343 tttaacctaacaaattccatctaaaaaa-tgcatcgcaccaatttcattcat 393  Q
    |||||||||| |||||| |||||||||| || ||||||||||||||||||||    
T  605020 tttaacctaataaattcaatctaaaaaaatgtatcgcaccaatttcattcat 604969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #57
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 264 - 353
Target Start/End: Complemental strand, 604434 - 604344
Alignment:
Q  264 ttatttattaattttgttacctctgcagcaatttaacctaattttttcccgctc-atttgctttattatgtttgcaattatttaacctaac 353  Q
    |||||||||||||||||||  |||| ||||| |||||||||| ||||||| ||| ||||| | ||||| |||  || | ||||||||||||    
T  604434 ttatttattaattttgttagatctgtagcaacttaacctaatattttccctctctatttgttgtattaggttaacagtaatttaacctaac 604344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #58
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 332 - 393
Target Start/End: Complemental strand, 23831193 - 23831131
Alignment:
Q  332 gtttgcaattatttaacctaacaaattccatctaaa-aaatgcatcgcaccaatttcattcat 393  Q
    ||||||||||| |||||||| |||||| ||||||||  |||| ||| ||||||||||||||||    
T  23831193 gtttgcaattacttaacctatcaaattgcatctaaattaatgtatctcaccaatttcattcat 23831131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #59
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 221 - 261
Target Start/End: Complemental strand, 11582811 - 11582771
Alignment:
Q  221 tgtacaatggggtgtatgagtaaagggtgttcatgtaacat 261  Q
    ||||||||||| |||| || |||||||||||||||||||||    
T  11582811 tgtacaatgggatgtaggaataaagggtgttcatgtaacat 11582771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #60
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 221 - 261
Target Start/End: Complemental strand, 20148805 - 20148765
Alignment:
Q  221 tgtacaatggggtgtatgagtaaagggtgttcatgtaacat 261  Q
    ||||||||||| ||||||| ||||||||||| |||||||||    
T  20148805 tgtacaatgggatgtatgaataaagggtgtttatgtaacat 20148765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #61
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 221 - 261
Target Start/End: Complemental strand, 29705407 - 29705367
Alignment:
Q  221 tgtacaatggggtgtatgagtaaagggtgttcatgtaacat 261  Q
    ||||||||||||||||  | |||||||||||||||||||||    
T  29705407 tgtacaatggggtgtagaaataaagggtgttcatgtaacat 29705367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #62
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 221 - 261
Target Start/End: Original strand, 33630048 - 33630088
Alignment:
Q  221 tgtacaatggggtgtatgagtaaagggtgttcatgtaacat 261  Q
    ||||||||| ||||||||| |||||||||||| ||||||||    
T  33630048 tgtacaatgaggtgtatgattaaagggtgttcgtgtaacat 33630088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #63
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 221 - 261
Target Start/End: Complemental strand, 34304833 - 34304793
Alignment:
Q  221 tgtacaatggggtgtatgagtaaagggtgttcatgtaacat 261  Q
    |||||||| |||||||||| |||||| ||||||||||||||    
T  34304833 tgtacaatagggtgtatgattaaaggatgttcatgtaacat 34304793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #64
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 221 - 261
Target Start/End: Original strand, 36743538 - 36743578
Alignment:
Q  221 tgtacaatggggtgtatgagtaaagggtgttcatgtaacat 261  Q
    ||||||||||| |||| || |||||||||||||||||||||    
T  36743538 tgtacaatgggatgtaggaataaagggtgttcatgtaacat 36743578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #65
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 221 - 261
Target Start/End: Complemental strand, 42295240 - 42295200
Alignment:
Q  221 tgtacaatggggtgtatgagtaaagggtgttcatgtaacat 261  Q
    ||||||||| |||||| || |||||||||||||||||||||    
T  42295240 tgtacaatgaggtgtaggaataaagggtgttcatgtaacat 42295200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 100; Significance: 2e-49; HSPs: 54)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 263 - 393
Target Start/End: Complemental strand, 12442259 - 12442128
Alignment:
Q  263 tttatttattaattttgttacctctgcagcaatttaacctaattttttcccgctcatttgctttattatgtttgcaattatttaacctaacaaattccat 362  Q
    |||||||||||||| |||||  ||||||||||||||||||||||||||||||||||||||| |||||| ||||||||||||||||||||||||||| |||    
T  12442259 tttatttattaattatgttaggtctgcagcaatttaacctaattttttcccgctcatttgccttattaggtttgcaattatttaacctaacaaattacat 12442160  T
Q  363 cta-aaaaatgcatcgcaccaatttcattcat 393  Q
    ||| ||||||||||||||||||||||||||||    
T  12442159 ctacaaaaatgcatcgcaccaatttcattcat 12442128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 98; E-Value: 4e-48
Query Start/End: Original strand, 264 - 391
Target Start/End: Original strand, 11313979 - 11314108
Alignment:
Q  264 ttatttattaattttgttacctctgcagcaatttaacctaattttttc-ccgctcatttgctttattatgtttgcaattatttaacctaacaaattccat 362  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||  ||||||||||||||||||| ||||||||||||||||||||| |||||||||    
T  11313979 ttatttattaattttgttacgtctgcagcaatttaacctaattttttttccgctcatttgctttattaggtttgcaattatttaacctaaaaaattccat 11314078  T
Q  363 ct-aaaaaatgcatcgcaccaatttcattc 391  Q
    || |||||||||||||||||||||||||||    
T  11314079 ctaaaaaaatgcatcgcaccaatttcattc 11314108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 264 - 391
Target Start/End: Original strand, 35159704 - 35159831
Alignment:
Q  264 ttatttattaattttgttacctctgcagcaatttaacctaattttttcccgctcatttgctttattatgtttgcaattatttaacctaacaaattccatc 363  Q
    |||||||||||||||||||| ||||||||||||||||||| |||||||||||||||||||||||||| |||||||||||||||||||||||||||  |||    
T  35159704 ttatttattaattttgttacgtctgcagcaatttaaccta-ttttttcccgctcatttgctttattaggtttgcaattatttaacctaacaaattttatc 35159802  T
Q  364 t-aaaaaatgcatcgcaccaatttcattc 391  Q
    | |||||||||||||||||||||||||||    
T  35159803 taaaaaaatgcatcgcaccaatttcattc 35159831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 94; E-Value: 9e-46
Query Start/End: Original strand, 259 - 391
Target Start/End: Original strand, 7127554 - 7127687
Alignment:
Q  259 catctttatttattaattttgttacctctgcagcaatttaacctaattttttcccgctcatttgctttattatgtttgcaattatttaacctaacaaatt 358  Q
    |||| |||||||||||||||||||| | |||||||||||||||||||||||||| |||||||||||| |||| |||||||||||||||| ||||||||||    
T  7127554 catccttatttattaattttgttacgtttgcagcaatttaacctaattttttcctgctcatttgcttgattaggtttgcaattatttaaactaacaaatt 7127653  T
Q  359 ccatct-aaaaaatgcatcgcaccaatttcattc 391  Q
    |||||| |||||||| ||||||||||||||||||    
T  7127654 ccatctaaaaaaatgtatcgcaccaatttcattc 7127687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 94; E-Value: 9e-46
Query Start/End: Original strand, 260 - 393
Target Start/End: Complemental strand, 7673329 - 7673193
Alignment:
Q  260 atctttatttattaattttgttacctctgcagcaatttaacctaatttttt-cccgctcatttgctttattatgtttgcaattatttaacctaacaaatt 358  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||| |||| ||||||| ||||||| |||||||||||||||||||||||||||    
T  7673329 atctttatttattaattttgttacgtctgcagcaatttaacctaatttttttcccgttcatttgttttattaggtttgcaattatttaacctaacaaatt 7673230  T
Q  359 ccatctaa--aaaatgcatcgcaccaatttcattcat 393  Q
     |||||||  ||||||||||||| |||||||||||||    
T  7673229 tcatctaaaaaaaatgcatcgcatcaatttcattcat 7673193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 93; E-Value: 4e-45
Query Start/End: Original strand, 264 - 391
Target Start/End: Original strand, 16528600 - 16528728
Alignment:
Q  264 ttatttattaattttgttacctctgcagcaatttaacctaattttttcccgctcatttgctttattatgtttgcaattatttaacctaacaaattccatc 363  Q
    |||||||||||||||||||| ||| || |||||||||||||  |||||||||||||||||||||||| |||||||||||||||||||||||||||| |||    
T  16528600 ttatttattaattttgttacgtctacaacaatttaacctaacattttcccgctcatttgctttattaggtttgcaattatttaacctaacaaattctatc 16528699  T
Q  364 t-aaaaaatgcatcgcaccaatttcattc 391  Q
    | |||||||||||||||||||||||||||    
T  16528700 taaaaaaatgcatcgcaccaatttcattc 16528728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 93; E-Value: 4e-45
Query Start/End: Original strand, 264 - 391
Target Start/End: Complemental strand, 26523265 - 26523137
Alignment:
Q  264 ttatttattaattttgttacctctgcagcaatttaacctaattttttcccgctcatttgctttattatgtttgcaattatttaacctaacaaattccatc 363  Q
    |||||||||||||||||||  |||||| ||||||||||||||||||| ||||||||||||||||||| |||||||||||||| | |||||||||||||||    
T  26523265 ttatttattaattttgttatgtctgcatcaatttaacctaatttttttccgctcatttgctttattaggtttgcaattatttgatctaacaaattccatc 26523166  T
Q  364 taa-aaaatgcatcgcaccaatttcattc 391  Q
    ||| |||||||||||||||||||||||||    
T  26523165 taaaaaaatgcatcgcaccaatttcattc 26523137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 93; E-Value: 4e-45
Query Start/End: Original strand, 264 - 391
Target Start/End: Complemental strand, 43395058 - 43394931
Alignment:
Q  264 ttatttattaattttgttacctctgcagcaatttaacctaattttttcccgctcatttgctttattatgtttgcaattatttaacctaacaaattccatc 363  Q
    |||||||||||||| ||||| | |||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||| ||||    
T  43395058 ttatttattaattt-gttacgtttgcagcaatttaacctaattttttcctgctcatttgctttattaggtttgcaattatttaacctaacaaatttcatc 43394960  T
Q  364 taa-aaaatgcatcgcaccaatttcattc 391  Q
    ||| |||||||||||||||||||||||||    
T  43394959 taaaaaaatgcatcgcaccaatttcattc 43394931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 91; E-Value: 6e-44
Query Start/End: Original strand, 256 - 393
Target Start/End: Original strand, 19121899 - 19122037
Alignment:
Q  256 taacatctttatttattaattttgttacctctgcagcaatttaacctaattttttcccgctcatttgctttattatgtttgcaattatttaacctaacaa 355  Q
    ||||||| |||||||||||||||||||  |||||| ||||||||||||||||||| |  |||||||||||||||| |||||||||| |||||||||||||    
T  19121899 taacatccttatttattaattttgttaggtctgcatcaatttaacctaatttttttcaactcatttgctttattaggtttgcaattgtttaacctaacaa 19121998  T
Q  356 attccatct-aaaaaatgcatcgcaccaatttcattcat 393  Q
    |||| |||| |||||||||||||||||||||||||||||    
T  19121999 attctatctaaaaaaatgcatcgcaccaatttcattcat 19122037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 269 - 391
Target Start/End: Original strand, 11313807 - 11313930
Alignment:
Q  269 tattaattttgttacctctgcagcaatttaacctaattttttcccgctcatttgctttattatgtttgcaattatttaacctaacaaattccatct-aaa 367  Q
    ||||||||||||||| |||||| |||||||||||||||||||||||| ||||| |||||||| ||||||||||||||||||||||||||||||||| |||    
T  11313807 tattaattttgttacgtctgcaacaatttaacctaattttttcccgcacattttctttattaggtttgcaattatttaacctaacaaattccatctaaaa 11313906  T
Q  368 aaatgcatcgcaccaatttcattc 391  Q
    ||||| ||| ||||||||||||||    
T  11313907 aaatgtatcccaccaatttcattc 11313930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 264 - 390
Target Start/End: Complemental strand, 24351577 - 24351450
Alignment:
Q  264 ttatttattaattttgttacctctgcagcaatttaacctaattttttcccgctcatttgctttattatgtttgcaattatttaacctaacaaattccatc 363  Q
    ||||||||||||||| |||  ||||||| |||||||||||||| ||||||||||||||| ||||||| ||||||||||||||||||||||||||| ||||    
T  24351577 ttatttattaatttttttaggtctgcagtaatttaacctaattatttcccgctcatttgttttattaggtttgcaattatttaacctaacaaatttcatc 24351478  T
Q  364 taa-aaaatgcatcgcaccaatttcatt 390  Q
    ||| ||||||||||||||||||||||||    
T  24351477 taaaaaaatgcatcgcaccaatttcatt 24351450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 264 - 391
Target Start/End: Complemental strand, 31487189 - 31487062
Alignment:
Q  264 ttatttattaattttgttacctctgcagcaatttaacctaattttttcccgctcatttgctttattatgtttgcaattatttaacctaacaaattccatc 363  Q
    |||||||||||||||||||  ||||||| ||||||||||||| |||||||||||||||||| ||||| ||| ||| | ||||||||||||||||| ||||    
T  31487189 ttatttattaattttgttaggtctgcagtaatttaacctaatattttcccgctcatttgctgtattaggttagcagtaatttaacctaacaaatttcatc 31487090  T
Q  364 taaaaaatgcatcgcaccaatttcattc 391  Q
    ||||||||||||||||||||||||||||    
T  31487089 taaaaaatgcatcgcaccaatttcattc 31487062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 264 - 370
Target Start/End: Original strand, 16529135 - 16529241
Alignment:
Q  264 ttatttattaattttgttacctctgcagcaatttaacctaattttttcccgctcatttgctttattatgtttgcaattatttaacctaacaaattccatc 363  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||| ||||||||||||||||||  |||||||||||||||| ||||||||||||||    
T  16529135 ttatttattaattttgttacgtctgcagcaatttaacctaattttttcgcgctcatttgctttattagatttgcaattatttaacgtaacaaattccatc 16529234  T
Q  364 taaaaaa 370  Q
    |||||||    
T  16529235 taaaaaa 16529241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 276 - 391
Target Start/End: Original strand, 16528793 - 16528909
Alignment:
Q  276 tttgttacctctgcagcaatttaacctaattttttcccgctcatttgctttattatgtttgcaattatttaacctaacaaattccatct-aaaaaatgca 374  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||| |||||| |||||||| ||||||||||||||| |||||||| ||||||| ||    
T  16528793 tttgttacgtctgcagcaatttaacctaattttttcccgctcatttgccttattaggtttgcaaatatttaacctaacaacttccatctaaaaaaattca 16528892  T
Q  375 tcgcaccaatttcattc 391  Q
    |||||||||||||||||    
T  16528893 tcgcaccaatttcattc 16528909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 84; E-Value: 8e-40
Query Start/End: Original strand, 264 - 393
Target Start/End: Original strand, 16528959 - 16529087
Alignment:
Q  264 ttatttattaattttgttacctctgcagcaatttaacctaattttttcccgctcatttgctttattatgtttgcaattatttaacctaacaaattccatc 363  Q
    |||||||||||||||||||| ||||||||||||||||||||||||  || |||||||||| |||||| |||||||||||||||||||||||||||  |||    
T  16528959 ttatttattaattttgttacgtctgcagcaatttaacctaatttt--cctgctcatttgccttattaggtttgcaattatttaacctaacaaatttaatc 16529056  T
Q  364 t-aaaaaatgcatcgcaccaatttcattcat 393  Q
    | ||||||| |||||||||||||||||||||    
T  16529057 taaaaaaattcatcgcaccaatttcattcat 16529087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 260 - 390
Target Start/End: Original strand, 35159415 - 35159545
Alignment:
Q  260 atctttatttattaattttgttacctctgcagcaatttaacctaattttttcccgctcatttgctttattatgtttgcaattatttaacctaacaaattc 359  Q
    |||||||||||||||||||||||| | |||| |||||||||||||||||| |||| || |||||||||||| |||||||||||||||||||||| |||||    
T  35159415 atctttatttattaattttgttacgt-tgcaacaatttaacctaattttt-cccgttcttttgctttattaggtttgcaattatttaacctaaccaattc 35159512  T
Q  360 catct--aaaaaatgcatcgcaccaatttcatt 390  Q
    |||||  ||||||||||||||||||||||||||    
T  35159513 catctaaaaaaaatgcatcgcaccaatttcatt 35159545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 264 - 391
Target Start/End: Original strand, 11313640 - 11313770
Alignment:
Q  264 ttatttattaattttgttacctctgcagcaatttaacctaattttttcccgctcatttgctttattatgtttgcaattatttaacctaacaaattccatc 363  Q
    ||||||||||||||| |||| ||| || |||||||||||||||||||||||||||||| |||||||| |||||||||||||||||||||||||||| |||    
T  11313640 ttatttattaatttttttacgtctacaacaatttaacctaattttttcccgctcattttctttattaggtttgcaattatttaacctaacaaattctatc 11313739  T
Q  364 t---aaaaaatgcatcgcaccaatttcattc 391  Q
    |   ||||||||||| ||| |||||||||||    
T  11313740 taaaaaaaaatgcattgcatcaatttcattc 11313770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 256 - 391
Target Start/End: Original strand, 19122235 - 19122371
Alignment:
Q  256 taacatctttatttattaattttgttacctctgcagcaatttaacctaattttttcccgctcatttgctttattatgtttgcaattatttaacctaacaa 355  Q
    ||||||| |||||||||||||||||||  | |||| ||||||||||||||||||| || |||||||||||||||| |||||||||| |||||||||||||    
T  19122235 taacatccttatttattaattttgttaggtttgcatcaatttaacctaatttttttccactcatttgctttattaggtttgcaattgtttaacctaacaa 19122334  T
Q  356 attccatct-aaaaaatgcatcgcaccaatttcattc 391  Q
    |||| |||| |||||||||||| || |||||||||||    
T  19122335 attctatctaaaaaaatgcatcacatcaatttcattc 19122371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 264 - 390
Target Start/End: Complemental strand, 41093175 - 41093047
Alignment:
Q  264 ttatttattaattttgttacctctgcagcaatttaacctaattttttcccgctcatttgctttattatgtttgcaattatttaacctaacaaattc--ca 361  Q
    |||||||||||||||||||  |||||| |||||||||||||||| |||| ||| ||||||||||||| ||||||||||||||||||||||||||||  |     
T  41093175 ttatttattaattttgttaggtctgcatcaatttaacctaatttattcctgctgatttgctttattaggtttgcaattatttaacctaacaaattcttcc 41093076  T
Q  362 tctaaaaaatgcatcgcaccaatttcatt 390  Q
    |  ||||||||||||||||||||||||||    
T  41093075 taaaaaaaatgcatcgcaccaatttcatt 41093047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 287 - 390
Target Start/End: Complemental strand, 24351001 - 24350897
Alignment:
Q  287 tgcagcaatttaacctaattttttcccgctcatttgctttattatgtttgcaattatttaacctaacaaattccatctaa-aaaatgcatcgcaccaatt 385  Q
    ||||| |||||||||||||| ||||||||||||||| ||||||| ||||||||||||||||||||||||||| ||||||| |||||||||||||||||||    
T  24351001 tgcagtaatttaacctaattatttcccgctcatttgttttattaggtttgcaattatttaacctaacaaatttcatctaaaaaaatgcatcgcaccaatt 24350902  T
Q  386 tcatt 390  Q
    |||||    
T  24350901 tcatt 24350897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 264 - 370
Target Start/End: Complemental strand, 9488175 - 9488069
Alignment:
Q  264 ttatttattaattttgttacctctgcagcaatttaacctaattttttcccgctcatttgctttattatgtttgcaattatttaacctaacaaattccatc 363  Q
    |||||||||||||||||||| |||||| ||||||||||||||||||| ||| | |||||||||||||  |||||||||||||||||||||||||| ||||    
T  9488175 ttatttattaattttgttacgtctgcaacaatttaacctaatttttttccgtttatttgctttattagatttgcaattatttaacctaacaaatttcatc 9488076  T
Q  364 taaaaaa 370  Q
    |||||||    
T  9488075 taaaaaa 9488069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 264 - 393
Target Start/End: Original strand, 10409525 - 10409655
Alignment:
Q  264 ttatttattaattttgttacctctgcagcaatttaacctaattttttcccgctcatttgctttattatgtttgcaattatttaacctaacaaattccatc 363  Q
    |||||||||||||||||||| ||| ||| ||||||| ||||||||||||||||||||| ||| | ||  |||||||||||||||||||||||||| |||     
T  10409525 ttatttattaattttgttacgtctccagtaatttaatctaattttttcccgctcattttcttcactagatttgcaattatttaacctaacaaatttcatt 10409624  T
Q  364 t-aaaaaatgcatcgcaccaatttcattcat 393  Q
    | ||||||||||||||| |||||||||||||    
T  10409625 taaaaaaatgcatcgcatcaatttcattcat 10409655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 262 - 391
Target Start/End: Complemental strand, 31486943 - 31486813
Alignment:
Q  262 ctttatttattaattttgttacctctgcagcaatttaacctaattttttcccgctcatttgctttattatgtttgcaattatttaacctaacaaattcca 361  Q
    ||||||||||||||||| |||  |||||| |||||||||||||| |||||||| ||||||||| ||||| |||  || | ||||||||||||||||||||    
T  31486943 ctttatttattaatttttttaggtctgcaacaatttaacctaatattttcccgttcatttgctgtattaggttaacagtaatttaacctaacaaattcca 31486844  T
Q  362 tctaa-aaaatgcatcgcaccaatttcattc 391  Q
    ||||| |||||||||||||||||||||||||    
T  31486843 tctaaaaaaatgcatcgcaccaatttcattc 31486813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 264 - 391
Target Start/End: Complemental strand, 41092995 - 41092869
Alignment:
Q  264 ttatttattaattttgttacctctgcagcaatttaacctaattttttcccgctcatttgctttattatgtttgcaattatttaacctaacaaattccatc 363  Q
    |||||||||||||||||||  |||||| |||||||||||||||| |||| |||| |||||||||||| ||||||||||||||||||||||||||| ||||    
T  41092995 ttatttattaattttgttaggtctgcatcaatttaacctaatttattcc-gctcttttgctttattaggtttgcaattatttaacctaacaaatt-catc 41092898  T
Q  364 t-aaaaaatgcatcgcaccaatttcattc 391  Q
    | |||||||||||| | ||||||||||||    
T  41092897 taaaaaaatgcatcaccccaatttcattc 41092869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 264 - 391
Target Start/End: Complemental strand, 14166289 - 14166159
Alignment:
Q  264 ttatttattaattttgttacctctgcagcaatttaacctaattttttcc-cgctcatttgctttattatgtttgcaattatttaacctaacaaattccat 362  Q
    |||||||||||||||||||  ||||||| |||||||| |||||||||   |  |||||||||||||||||||||||||||||||||||||||||||||||    
T  14166289 ttatttattaattttgttaggtctgcagtaatttaacttaatttttttttcagtcatttgctttattatgtttgcaattatttaacctaacaaattccat 14166190  T
Q  363 ct--aaaaaatgcatcgcaccaatttcattc 391  Q
     |  ||||||||||||||| |||||||||||    
T  14166189 ttaaaaaaaatgcatcgcatcaatttcattc 14166159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 264 - 370
Target Start/End: Original strand, 16526197 - 16526304
Alignment:
Q  264 ttatttattaa-ttttgttacctctgcagcaatttaacctaattttttcccgctcatttgctttattatgtttgcaattatttaacctaacaaattccat 362  Q
    ||||||||||| ||||||||| |||||| |||||||||||||||||||  | |||||||||||||||| |||||||||||||||||||||||||||||||    
T  16526197 ttatttattaaattttgttacgtctgcatcaatttaacctaattttttttcactcatttgctttattaggtttgcaattatttaacctaacaaattccat 16526296  T
Q  363 ctaaaaaa 370  Q
     |||||||    
T  16526297 ttaaaaaa 16526304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 264 - 391
Target Start/End: Original strand, 23138032 - 23138161
Alignment:
Q  264 ttatttattaattttgttacctctgcagcaatttaacctaattttttcccgctcatttgctttattatgtttgcaattatttaacctaacaaattccatc 363  Q
    |||||||||||||| ||||  ||||||||| |||||||||||||||||| ||||||||||||||||| |||||||||||| |||| |||||| |||||||    
T  23138032 ttatttattaatttcgttaggtctgcagcattttaacctaattttttcc-gctcatttgctttattaggtttgcaattatataacgtaacaagttccatc 23138130  T
Q  364 t-aaaaaatgcatcg--caccaatttcattc 391  Q
    | |||||||||||||  ||||||||||||||    
T  23138131 taaaaaaatgcatcgcacaccaatttcattc 23138161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 264 - 393
Target Start/End: Complemental strand, 13105284 - 13105150
Alignment:
Q  264 ttatttattaattttgttacctctgcagcaatttaacctaattttttcccgctcatttgctttattatgtttgcaatta----tttaacctaacaaattc 359  Q
    |||||||||||||||||    ||||||||| |||||||||||||||| ||||||||| | ||||||| |||||||||||    ||||||||||||||||     
T  13105284 ttatttattaattttgtatggtctgcagcagtttaacctaatttttttccgctcattagttttattaggtttgcaattatttatttaacctaacaaattt 13105185  T
Q  360 catct-aaaaaatgcatcgcaccaatttcattcat 393  Q
    ||||| |||||||||||||||||||||||||||||    
T  13105184 catctaaaaaaatgcatcgcaccaatttcattcat 13105150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 264 - 357
Target Start/End: Complemental strand, 26523361 - 26523268
Alignment:
Q  264 ttatttattaattttgttacctctgcagcaatttaacctaattttttcccgctcatttgctttattatgtttgcaattatttaacctaacaaat 357  Q
    |||||||||||||||||||  |||||| ||||||||||||||||||||||||| ||||||||||||| |||||||||||||| |||||||||||    
T  26523361 ttatttattaattttgttatgtctgcatcaatttaacctaattttttcccgcttatttgctttattaggtttgcaattatttgacctaacaaat 26523268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 264 - 391
Target Start/End: Complemental strand, 13035309 - 13035177
Alignment:
Q  264 ttatttattaattttgttacctctgcagcaatttaacctaattttttcccgctcatttgctttattatgtttgcaatta----tttaacctaacaaattc 359  Q
    |||||||||||||||||    ||||||||||||||| |||||||||| ||||||||| | ||||||| |||||||||||    ||||||||||||||||     
T  13035309 ttatttattaattttgtatggtctgcagcaatttaatctaatttttttccgctcattagttttattaggtttgcaattatttatttaacctaacaaattt 13035210  T
Q  360 catct-aaaaaatgcatcgcaccaatttcattc 391  Q
    ||||| |||||||||||||||||||||||||||    
T  13035209 catctaaaaaaatgcatcgcaccaatttcattc 13035177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 293 - 391
Target Start/End: Complemental strand, 43395207 - 43395106
Alignment:
Q  293 aatttaacctaattttttcccgctcatttgctttattatgtttgcaattatttaacctaacaaattccatctaaaaa---atgcatcgcaccaatttcat 389  Q
    |||||||| | ||||||||||||||||||||||||||| |||| |||||||||||||||||||||| ||| ||||||   ||||||||||||||||||||    
T  43395207 aatttaacttgattttttcccgctcatttgctttattaggtttccaattatttaacctaacaaattacatgtaaaaaaatatgcatcgcaccaatttcat 43395108  T
Q  390 tc 391  Q
    ||    
T  43395107 tc 43395106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 264 - 393
Target Start/End: Original strand, 16305348 - 16305476
Alignment:
Q  264 ttatttattaattttgttacctctgcagcaatttaacctaattttttcccgctcatttgctttattatgtttgcaattatttaacctaacaaattccatc 363  Q
    |||||||||||||||||||  | || |  ||||||| ||||||||  |||||||||||||||||||| |||||||||||||||| |||| ||||||||||    
T  16305348 ttatttattaattttgttaggtttgtaataatttaaactaatttt--cccgctcatttgctttattaggtttgcaattatttaatctaataaattccatc 16305445  T
Q  364 t-aaaaaatgcatcgcaccaatttcattcat 393  Q
    | ||||||||||  ||| |||||||||||||    
T  16305446 taaaaaaatgcacagcatcaatttcattcat 16305476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 285 - 348
Target Start/End: Original strand, 24326546 - 24326609
Alignment:
Q  285 tctgcagcaatttaacctaattttttcccgctcatttgctttattatgtttgcaattatttaac 348  Q
    |||||| ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  24326546 tctgcaacaatttaacctaattttttcccgctcatttgctttattaggtttgcaattatttaac 24326609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 285 - 348
Target Start/End: Complemental strand, 24350795 - 24350732
Alignment:
Q  285 tctgcagcaatttaacctaattttttcccgctcatttgctttattatgtttgcaattatttaac 348  Q
    |||||| ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  24350795 tctgcaacaatttaacctaattttttcccgctcatttgctttattaggtttgcaattatttaac 24350732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 285 - 348
Target Start/End: Complemental strand, 24351349 - 24351286
Alignment:
Q  285 tctgcagcaatttaacctaattttttcccgctcatttgctttattatgtttgcaattatttaac 348  Q
    |||||| ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  24351349 tctgcaacaatttaacctaattttttcccgctcatttgctttattaggtttgcaattatttaac 24351286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 291 - 393
Target Start/End: Complemental strand, 38004744 - 38004643
Alignment:
Q  291 gcaatttaacctaattttttcccgctcatttgctttattatgtttgcaattatttaacctaacaaattccatctaaaaaatgcatcgcaccaatttcatt 390  Q
    |||||||||| ||||||||| | | |||||||||||| || ||||| |||||||||| |||| ||||| |||||||||||||||||||| ||||||||||    
T  38004744 gcaatttaacttaatttttttc-gttcatttgctttaataggtttgtaattatttaatctaataaatttcatctaaaaaatgcatcgcatcaatttcatt 38004646  T
Q  391 cat 393  Q
    |||    
T  38004645 cat 38004643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 264 - 391
Target Start/End: Complemental strand, 26523542 - 26523413
Alignment:
Q  264 ttatttattaattttgttacctctgcagcaatttaacctaattttttccc---gctcatttgctttattatgtttgcaattatttaacctaacaaattcc 360  Q
    |||||||||||||||||||  | |||| || |||||| |||||||||  |   ||||||||||||||||||  ||||||||||||||| ||||||||| |    
T  26523542 ttatttattaattttgttaggtgtgcaccattttaacttaattttttttctttgctcatttgctttattat--ttgcaattatttaacataacaaatttc 26523445  T
Q  361 atctaa-aaaatgcatcgcaccaatttcattc 391  Q
    |||||| |||||||||| || |||||||||||    
T  26523444 atctaaaaaaatgcatcacatcaatttcattc 26523413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 264 - 309
Target Start/End: Complemental strand, 7673145 - 7673100
Alignment:
Q  264 ttatttattaattttgttacctctgcagcaatttaacctaattttt 309  Q
    |||||||||||||||||||| |||||||||||||||||||||||||    
T  7673145 ttatttattaattttgttacgtctgcagcaatttaacctaattttt 7673100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 264 - 311
Target Start/End: Original strand, 38109886 - 38109933
Alignment:
Q  264 ttatttattaattttgttacctctgcagcaatttaacctaattttttc 311  Q
    |||||||||||||||||||| ||||||||||||||||||| |||||||    
T  38109886 ttatttattaattttgttacgtctgcagcaatttaacctatttttttc 38109933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 343 - 393
Target Start/End: Original strand, 38109946 - 38109997
Alignment:
Q  343 tttaacctaacaaattccatctaaaa-aatgcatcgcaccaatttcattcat 393  Q
    ||||| |||||||||||||||||||| |||||||||||||||||||||||||    
T  38109946 tttaatctaacaaattccatctaaaaaaatgcatcgcaccaatttcattcat 38109997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 264 - 313
Target Start/End: Original strand, 22431585 - 22431634
Alignment:
Q  264 ttatttattaattttgttacctctgcagcaatttaacctaattttttccc 313  Q
    |||||||||||||||||||  |||||||||| ||||||||||||||||||    
T  22431585 ttatttattaattttgttaagtctgcagcaacttaacctaattttttccc 22431634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 221 - 261
Target Start/End: Original strand, 33855098 - 33855138
Alignment:
Q  221 tgtacaatggggtgtatgagtaaagggtgttcatgtaacat 261  Q
    |||||||||||||||| || |||||||||||||||||||||    
T  33855098 tgtacaatggggtgtaggaataaagggtgttcatgtaacat 33855138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 264 - 308
Target Start/End: Original strand, 38268880 - 38268924
Alignment:
Q  264 ttatttattaattttgttacctctgcagcaatttaacctaatttt 308  Q
    |||||||||||||||||||  |||||| |||||||||||||||||    
T  38268880 ttatttattaattttgttaggtctgcaacaatttaacctaatttt 38268924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 350 - 391
Target Start/End: Complemental strand, 24271164 - 24271122
Alignment:
Q  350 taacaaattccatctaaaaaa-tgcatcgcaccaatttcattc 391  Q
    ||||||||||||||||||||| ||||||||||| |||||||||    
T  24271164 taacaaattccatctaaaaaaatgcatcgcacccatttcattc 24271122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 350 - 391
Target Start/End: Original strand, 24325983 - 24326025
Alignment:
Q  350 taacaaattccatctaaaa-aatgcatcgcaccaatttcattc 391  Q
    ||||||||||||||||||| ||||||||||||| |||||||||    
T  24325983 taacaaattccatctaaaaaaatgcatcgcacccatttcattc 24326025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 350 - 391
Target Start/End: Complemental strand, 24347786 - 24347744
Alignment:
Q  350 taacaaattccatctaaaaaa-tgcatcgcaccaatttcattc 391  Q
    ||||||||||||||||||||| ||||||||||| |||||||||    
T  24347786 taacaaattccatctaaaaaaatgcatcgcacccatttcattc 24347744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 221 - 261
Target Start/End: Original strand, 2614704 - 2614744
Alignment:
Q  221 tgtacaatggggtgtatgagtaaagggtgttcatgtaacat 261  Q
    ||||||||||| |||| || |||||||||||||||||||||    
T  2614704 tgtacaatgggatgtaggaataaagggtgttcatgtaacat 2614744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 221 - 261
Target Start/End: Complemental strand, 7617178 - 7617138
Alignment:
Q  221 tgtacaatggggtgtatgagtaaagggtgttcatgtaacat 261  Q
    |||| ||||| |||||||| |||||||||||||||||||||    
T  7617178 tgtataatggagtgtatgaataaagggtgttcatgtaacat 7617138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 365 - 393
Target Start/End: Complemental strand, 14165974 - 14165946
Alignment:
Q  365 aaaaaatgcatcgcaccaatttcattcat 393  Q
    |||||||||||||||||||||||||||||    
T  14165974 aaaaaatgcatcgcaccaatttcattcat 14165946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 221 - 261
Target Start/End: Complemental strand, 18034027 - 18033987
Alignment:
Q  221 tgtacaatggggtgtatgagtaaagggtgttcatgtaacat 261  Q
    |||||||||| ||||| || |||||||||||||||||||||    
T  18034027 tgtacaatggagtgtaggaataaagggtgttcatgtaacat 18033987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 221 - 261
Target Start/End: Complemental strand, 22512350 - 22512310
Alignment:
Q  221 tgtacaatggggtgtatgagtaaagggtgttcatgtaacat 261  Q
    |||||||||| ||||| || |||||||||||||||||||||    
T  22512350 tgtacaatggagtgtaggaataaagggtgttcatgtaacat 22512310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 221 - 261
Target Start/End: Original strand, 25915042 - 25915082
Alignment:
Q  221 tgtacaatggggtgtatgagtaaagggtgttcatgtaacat 261  Q
    ||||||||| |||||| || |||||||||||||||||||||    
T  25915042 tgtacaatgaggtgtaggaataaagggtgttcatgtaacat 25915082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 221 - 261
Target Start/End: Original strand, 32473449 - 32473489
Alignment:
Q  221 tgtacaatggggtgtatgagtaaagggtgttcatgtaacat 261  Q
    ||||||||  ||||||||| |||||||||||||||||||||    
T  32473449 tgtacaataaggtgtatgattaaagggtgttcatgtaacat 32473489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 221 - 261
Target Start/End: Original strand, 41334718 - 41334758
Alignment:
Q  221 tgtacaatggggtgtatgagtaaagggtgttcatgtaacat 261  Q
    |||| |||| ||||||||| |||||||||||||||||||||    
T  41334718 tgtataatgaggtgtatgaataaagggtgttcatgtaacat 41334758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0018 (Bit Score: 93; Significance: 4e-45; HSPs: 2)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 93; E-Value: 4e-45
Query Start/End: Original strand, 264 - 387
Target Start/End: Complemental strand, 163908 - 163784
Alignment:
Q  264 ttatttattaattttgttacctctgcagcaatttaacctaattttttcccgctcatttgctttattatgtttgcaattatttaacctaacaaattccatc 363  Q
    |||||||||||||||||||  ||||||||||||||||||| |||||| ||||||||||||||||||| ||||||||||||||||||||| ||||||||||    
T  163908 ttatttattaattttgttaggtctgcagcaatttaacctactttttttccgctcatttgctttattaggtttgcaattatttaacctaataaattccatc 163809  T
Q  364 t-aaaaaatgcatcgcaccaatttc 387  Q
    | |||||||||||||||||||||||    
T  163808 tgaaaaaatgcatcgcaccaatttc 163784  T

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Target: scaffold0018; HSP #2
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 267 - 309
Target Start/End: Complemental strand, 163270 - 163228
Alignment:
Q  267 tttattaattttgttacctctgcagcaatttaacctaattttt 309  Q
    ||||||||||||||||  |||||||||| ||||||||||||||    
T  163270 tttattaattttgttaagtctgcagcaacttaacctaattttt 163228  T

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Target: scaffold0504 (Bit Score: 87; Significance: 1e-41; HSPs: 1)
Name: scaffold0504
Description:

Target: scaffold0504; HSP #1
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 264 - 377
Target Start/End: Complemental strand, 1640 - 1526
Alignment:
Q  264 ttatttattaattttgttacctctgcagcaatttaacctaa-ttttttcccgctcatttgctttattatgtttgcaattatttaacctaacaaattccat 362  Q
    |||||||||||||||||||| ||||||||||||||| |||| ||||||||| |||||||||||||||| ||||||||||||||||||||| |||||||||    
T  1640 ttatttattaattttgttacgtctgcagcaatttaatctaaattttttcccactcatttgctttattaagtttgcaattatttaacctaataaattccat 1541  T
Q  363 ctaaaaaatgcatcg 377  Q
    |||||||||||||||    
T  1540 ctaaaaaatgcatcg 1526  T

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Target: scaffold0013 (Bit Score: 86; Significance: 5e-41; HSPs: 1)
Name: scaffold0013
Description:

Target: scaffold0013; HSP #1
Raw Score: 86; E-Value: 5e-41
Query Start/End: Original strand, 260 - 391
Target Start/End: Original strand, 102701 - 102831
Alignment:
Q  260 atctttatttattaattttgttacctctgcagcaatttaacctaattttttcccgctcatttgctttattatgtttgcaattatttaacctaacaaattc 359  Q
    |||||||||||||||||||||||  | ||||  ||||  |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  102701 atctttatttattaattttgttagatatgcaataatt--acctaattttttcccgctcatttgctttattaagtttgcaattatttaacctaacaaattc 102798  T
Q  360 catct-aaaaaatgcatcgcaccaatttcattc 391  Q
    ||||| ||||||||||||||| |||||||||||    
T  102799 catctaaaaaaatgcatcgcatcaatttcattc 102831  T

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Target: scaffold0240 (Bit Score: 83; Significance: 3e-39; HSPs: 2)
Name: scaffold0240
Description:

Target: scaffold0240; HSP #1
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 264 - 393
Target Start/End: Original strand, 13092 - 13224
Alignment:
Q  264 ttatttattaattttgttacctctgcagcaatttaacctaattttttcccgctcatttgctttattatgtttgcaattatttaacctaacaaattccatc 363  Q
    |||||||||||||| |||   |||||| ||||||||||||||||||| ||||||||||| ||||||| |||||| |||||||||||||||||||||||||    
T  13092 ttatttattaatttcgtttggtctgcaacaatttaacctaatttttttccgctcatttggtttattaggtttgccattatttaacctaacaaattccatc 13191  T
Q  364 taaa---aaatgcatcgcaccaatttcattcat 393  Q
    ||||   ||||||||||||||||||||||||||    
T  13192 taaaaacaaatgcatcgcaccaatttcattcat 13224  T

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Target: scaffold0240; HSP #2
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 298 - 391
Target Start/End: Original strand, 13285 - 13379
Alignment:
Q  298 aacctaattttttcccgctcatttgctttattatgtttgcaattatttaacctaacaaattccatct-aaaaaatgcatcgcaccaatttcattc 391  Q
    |||||||||||||||| |||||||||||||||| | ||||||||||||||||||||||||| ||||| |||||||||||||||||||||||||||    
T  13285 aacctaattttttccctctcatttgctttattagggttgcaattatttaacctaacaaatttcatctaaaaaaatgcatcgcaccaatttcattc 13379  T

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Target: scaffold0294 (Bit Score: 72; Significance: 1e-32; HSPs: 1)
Name: scaffold0294
Description:

Target: scaffold0294; HSP #1
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 259 - 367
Target Start/End: Complemental strand, 12496 - 12386
Alignment:
Q  259 catctttatttattaattttgttacctctgcagcaatttaacctaattttttcccgctcatttgctttattatgtttgcaattatttaacctaac--aaa 356  Q
    |||| |||||||||||||||||||  | |||||||||||||||||||||||| ||||||||||| ||||||| ||||||||||||||||||||||  |||    
T  12496 catccttatttattaattttgttaggtttgcagcaatttaacctaatttttttccgctcatttgttttattaggtttgcaattatttaacctaacaaaaa 12397  T
Q  357 ttccatctaaa 367  Q
    |||||||||||    
T  12396 ttccatctaaa 12386  T

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Target: scaffold0320 (Bit Score: 71; Significance: 5e-32; HSPs: 1)
Name: scaffold0320
Description:

Target: scaffold0320; HSP #1
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 258 - 387
Target Start/End: Complemental strand, 14692 - 14562
Alignment:
Q  258 acatctttatttattaattttgttacctctgcagcaatttaacctaattttttcccgctcatttgctttattatgtttgcaattatttaacctaacaaat 357  Q
    ||||| |||||||||||||||||||| | |||| ||||||||| |||||| ||| |||||||||| |||||||  |||||||||||||||||||||||||    
T  14692 acatccttatttattaattttgttacatttgcatcaatttaacttaatttattctcgctcatttgttttattagatttgcaattatttaacctaacaaat 14593  T
Q  358 tccatct-aaaaaatgcatcgcaccaatttc 387  Q
    || |||| |||||||||||| || |||||||    
T  14592 tctatctaaaaaaatgcatcccatcaatttc 14562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001 (Bit Score: 53; Significance: 3e-21; HSPs: 1)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 264 - 388
Target Start/End: Complemental strand, 196803 - 196680
Alignment:
Q  264 ttatttattaattttgttacctctgcagcaatttaacctaat-tttttcccgctcatttgctttattatgtttgcaattatttaacctaacaaattccat 362  Q
    |||||||||||||||||||  |   |||| |||||||||||| ||||| ||||||||||||| ||||| ||| |   | |||||||||||||||||||||    
T  196803 ttatttattaattttgttagat---cagccatttaacctaatattttttccgctcatttgctgtattaggttaggtgtaatttaacctaacaaattccat 196707  T
Q  363 ct-aaaaaatgcatcgcaccaatttca 388  Q
    || ||||||||||||||||||||||||    
T  196706 ctaaaaaaatgcatcgcaccaatttca 196680  T

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Target: scaffold0097 (Bit Score: 50; Significance: 2e-19; HSPs: 1)
Name: scaffold0097
Description:

Target: scaffold0097; HSP #1
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 327 - 391
Target Start/End: Original strand, 12735 - 12800
Alignment:
Q  327 attatgtttgcaattatttaacctaacaaattccatctaaa-aaatgcatcgcaccaatttcattc 391  Q
    |||| ||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||    
T  12735 attaagtttgcaattatttaacctaacaaatttcatctaaataaatgcatcgcaccaatttcattc 12800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1155 (Bit Score: 49; Significance: 6e-19; HSPs: 2)
Name: scaffold1155
Description:

Target: scaffold1155; HSP #1
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 343 - 391
Target Start/End: Complemental strand, 1152 - 1104
Alignment:
Q  343 tttaacctaacaaattccatctaaaaaatgcatcgcaccaatttcattc 391  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||    
T  1152 tttaacctaacaaattccatctaaaaaatgcatcgcaccaatttcattc 1104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1155; HSP #2
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 296 - 356
Target Start/End: Complemental strand, 1018 - 958
Alignment:
Q  296 ttaacctaattttttcccgctcatttgctttattatgtttgcaattatttaacctaacaaa 356  Q
    |||||||||| ||||||| |||||||||||||||| |||  || | |||||||||||||||    
T  1018 ttaacctaatattttccctctcatttgctttattaggttatcactaatttaacctaacaaa 958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0105 (Bit Score: 49; Significance: 6e-19; HSPs: 2)
Name: scaffold0105
Description:

Target: scaffold0105; HSP #1
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 343 - 391
Target Start/End: Complemental strand, 29915 - 29867
Alignment:
Q  343 tttaacctaacaaattccatctaaaaaatgcatcgcaccaatttcattc 391  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||    
T  29915 tttaacctaacaaattccatctaaaaaatgcatcgcaccaatttcattc 29867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0105; HSP #2
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 296 - 356
Target Start/End: Complemental strand, 29781 - 29721
Alignment:
Q  296 ttaacctaattttttcccgctcatttgctttattatgtttgcaattatttaacctaacaaa 356  Q
    |||||||||| ||||||| |||||||||||||||| |||  || | |||||||||||||||    
T  29781 ttaacctaatattttccctctcatttgctttattaggttatcactaatttaacctaacaaa 29721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0345 (Bit Score: 42; Significance: 0.00000000000001; HSPs: 2)
Name: scaffold0345
Description:

Target: scaffold0345; HSP #1
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 343 - 391
Target Start/End: Original strand, 9064 - 9113
Alignment:
Q  343 tttaacctaacaaattccatct-aaaaaatgcatcgcaccaatttcattc 391  Q
    |||||||||||||||||||||| |||||||||||||||||||||||||||    
T  9064 tttaacctaacaaattccatctaaaaaaatgcatcgcaccaatttcattc 9113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0345; HSP #2
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 296 - 356
Target Start/End: Original strand, 9199 - 9259
Alignment:
Q  296 ttaacctaattttttcccgctcatttgctttattatgtttgcaattatttaacctaacaaa 356  Q
    |||||||||| ||||||| |||||||||||||||| |||  || | |||||||||||||||    
T  9199 ttaacctaatattttccctctcatttgctttattaggttatcactaatttaacctaacaaa 9259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 221 - 261
Target Start/End: Original strand, 45774 - 45814
Alignment:
Q  221 tgtacaatggggtgtatgagtaaagggtgttcatgtaacat 261  Q
    |||||||| |||||||||| |||||||||||||||||||||    
T  45774 tgtacaatagggtgtatgattaaagggtgttcatgtaacat 45814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0432 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0432
Description:

Target: scaffold0432; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 264 - 309
Target Start/End: Complemental strand, 5415 - 5370
Alignment:
Q  264 ttatttattaattttgttacctctgcagcaatttaacctaattttt 309  Q
    ||||||||||||||| |||  |||||||||| ||||||||||||||    
T  5415 ttatttattaattttattaggtctgcagcaacttaacctaattttt 5370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0318 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0318
Description:

Target: scaffold0318; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 264 - 313
Target Start/End: Original strand, 5996 - 6045
Alignment:
Q  264 ttatttattaattttgttacctctgcagcaatttaacctaattttttccc 313  Q
    ||||||||||||||| |||  ||||| || ||||||||||||||||||||    
T  5996 ttatttattaattttattaggtctgcggcgatttaacctaattttttccc 6045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0385 (Bit Score: 29; Significance: 0.0000006; HSPs: 1)
Name: scaffold0385
Description:

Target: scaffold0385; HSP #1
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 221 - 261
Target Start/End: Complemental strand, 11296 - 11256
Alignment:
Q  221 tgtacaatggggtgtatgagtaaagggtgttcatgtaacat 261  Q
    ||||||||||||||||||| ||||| |||||||||| ||||    
T  11296 tgtacaatggggtgtatgaataaagtgtgttcatgtgacat 11256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0187 (Bit Score: 29; Significance: 0.0000006; HSPs: 2)
Name: scaffold0187
Description:

Target: scaffold0187; HSP #1
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 221 - 261
Target Start/End: Original strand, 14243 - 14283
Alignment:
Q  221 tgtacaatggggtgtatgagtaaagggtgttcatgtaacat 261  Q
    ||||||||||||||||  | |||||||||||||||||||||    
T  14243 tgtacaatggggtgtagaaataaagggtgttcatgtaacat 14283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0187; HSP #2
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 221 - 261
Target Start/End: Original strand, 24571 - 24611
Alignment:
Q  221 tgtacaatggggtgtatgagtaaagggtgttcatgtaacat 261  Q
    ||||||||||||||||  | |||||||||||||||||||||    
T  24571 tgtacaatggggtgtagaaataaagggtgttcatgtaacat 24611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0119 (Bit Score: 29; Significance: 0.0000006; HSPs: 1)
Name: scaffold0119
Description:

Target: scaffold0119; HSP #1
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 221 - 261
Target Start/End: Complemental strand, 730 - 690
Alignment:
Q  221 tgtacaatggggtgtatgagtaaagggtgttcatgtaacat 261  Q
    ||||||||| |||||| || |||||||||||||||||||||    
T  730 tgtacaatgaggtgtaggaataaagggtgttcatgtaacat 690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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