View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF0225_low_23 (Length: 333)
Name: NF0225_low_23
Description: NF0225
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF0225_low_23 |
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Alignment Details
Target: chr7 (Bit Score: 275; Significance: 1e-154; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 275; E-Value: 1e-154
Query Start/End: Original strand, 30 - 320
Target Start/End: Original strand, 24356978 - 24357268
Alignment:
| Q |
30 |
gtatcaagttacagatgatccttcggaaagcaatttcatcagcagatcagaactaagattgatccaagctggaaaaactgcttctccaaagaagagtaac |
129 |
Q |
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| T |
24356978 |
gtatcaagttacagatgatccttcggaaagcaattttatcaacagatcagaactaagattgatccaagctggaaaaactgcttctccaaagaagagtaac |
24357077 |
T |
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| Q |
130 |
aagcttcctcctataggccttattttatcaaaattgccatcatgggctataatatttgccaatgcaactaacaattgggtgagttttatttgcttttgtg |
229 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | |
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| T |
24357078 |
aagcttcctcctataggccttattttatcaaaattgccatcatgggctataatatttgccaatgcaactaacaattgggtgagttttatttgcttttgag |
24357177 |
T |
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| Q |
230 |
tgaagataagaacttgcttgatatcatgaatttaattttaagcatactgattttgaccttgtttaatttgcagggttactttgttcatctc |
320 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |
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| T |
24357178 |
tgaagataagaacttgcttgatatcatgaatttaattttaagcatactgattttgaccttgtttaatttgcagggttactttgttcttctc |
24357268 |
T |
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